Cucsa.244630 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.244630
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Reticulon-like protein
Location	scaffold02135 : 501715 .. 505026 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGATGTTAGTATTCTCCGTTTGCTCCCCTCAGTTCTTCAATCTTCATCCTCTCTCTGGCTTTCAATTCCCTCTCTTTCTCTCTTTCTCTCAAACCCTAATCACATTTCCATGGTAGGATCTAATTCTTCTCGTCGCATTTCTGTTCATCAAGCCCTTGGCGGTGGTCATGGTACTTCCCTTCTCCTTTCTTCTCTGTTTCCTGATCTTTCAGTTTTCCAACTGCTACTACATTCATGCTTTAGTATTCCTTCCTCGATCACGGTTTGTCTTTTCATGATCGGAAAATGAATTTTTCATTGCAATCTGTATCTGAATTATGTGTTTCATTGGGTTCATTTCTTTAAGAAACTGCCCCGATCTTCTCCTTTATGTTCTTTTTTAATTTGCTCACTTTGTTTTTATTTCTATTAAATGTTGTTAGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATGCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCATCATTCTTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGGTATTTTGGCTCTTCCTTCTGCCTGCTTTCGGTGCTTTAGATAGTTTTGTTTTATAATCTCCATTTCTTGGGTCCAAGTTTGTGGAGTTAATGTTTTTTTTTATCGATGATGAATCAAAGTAAATAACATACATTATTAGAGACCCATTTCATTGTATCAACCTTAGCATATCTCACAGAATGAGATGGTAATTAATAGGATTTCAAATAAATATGTCCATACAAAGTTGAACGTTTTTCAAATTTTTTGTTGGAAAATTTTCTGAGGTGATAATTAATATGGCTTAGAATTATTGTTTTAGGTTAGCTCTGATTAAATATTCACAATCTCAAGATTTGAAATGAAATGGACGTAGAGTAATAGTTACCTTCCTTTGTGATTCAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCAATGGTTGCCAATGAACTGCGATTTTGTATCAATTTTGCACTTTCTATAGCACGCGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTAAGGTATCATCACTTGTCTTTTTGTCTGTGAGATGGCTGGGACTTGTGTTAATTATTCATGATTTCAGGTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGTGAGTTTTGTGGGGCCTTTGTTTATTTGTAATCAGCCGTTCGAATATCATAGCTGTTGTAGTTTATGCATTTTATCAAAATATTTTTGCAGGGGTCCTTCTCAGTCTGTCAGCTCCTATAGTGTATGACAAATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAGGAAGCTTGATGAGAATGTTTTAAGGAAGATTCCATTGCCCTTAAATAAGGAGAAGAAGATGCAATAGGCACAGTACCTCGTTTTATGATCGGTAGCTTCAAAAGAAGTGAGCTGGATTATCTTTTTCGTAATGTTTGACTCCATTTTTGTATCATGACTCGAACCATAAAAATTATTTCTGATTGACATAGTGATAATTATGTACTAATATTCTAATGCTTGTTAAAAAATCTCCTATTTTCTCTTCTTCTTTCTTGTGTTTTCTTTCCTTTAATTTGAGCATCAATCTATTTCTTTCTATTGTAATCTAAATGCCACCTACTTCTCTTGATGAAGGATTGTTAGACCTTGAAGTTTATGAATAATTTCTCGTAGCTTATGAGATTAGTTTATTACTTCTTAAGTTTCAATGTTCTATACGTTAACATCTCATAAGATTTCACCAAATCTGATCACTTAGTTTTCAACATTTTAGAAACATAACAGCTAATGAATTAGTTATTAGTATCTTTTCTTTTACACTTGTTTCAGTTGATTAGTTAGAGAAATTAATTAGTTACAAGTTTCTTTCATCTCCTCTTGTCCTTGTTTTTTTGATAAATAGATTTGTTTTAATTGTTCATCCCCTGCCTTAGATTAGTGAAGTTATTGATCTTCTTATGGCTCAATGTTACCACTTACCACTTACTGGTAATTTCCTTAAATGGTGATTTCATTGTAGCCCATTCTTGCAAAACTACCCATCATAGTGATTCTACCTTACCCGCTGATCATTAAGGTGTTTTCTTAAATATCTATATCTGGAAGGAATAGCCGATTATCTGTAGACAAGTATTCTTCTTTAAAGTCCTTTAGGCTTTTAGTGCAGCATGATTCTTCTTGGTGGTGCATCGTCCATGCAAAATCCTTTTGTAATTACAATGAGAAATCTCTTCTTTGGTAGAACATTGTGAAAGGGCTGTGTCTACCCATGGCTACTAGGTTGTTCATTAGTTCTTATAATGAATATACATCTTTATTATTATTACTATTATTTTTTCTATGTATGCTTGTCAATGAAGTTGACTTCTAGCTTTATGTTCTTGGCCAAAGTAACCAATCTGTCAAAAGTGCTTATCCTGTCGTAAAAGATTTAAGATGTGGGTAATGTTATATTGTTCACACAATTCTTGGATGGGCTGCCCTGATTCTTGAGAATGTGCTATACTACAATGGTCAATCCAATATAGTTCAACTAATCAATGCTTCATAGGATGTAGGATGAAAGTTTTTGTGTATGGTAAGAAACTTTGCAAATAGATAATTATTTATAGGGTAGTTGAGTCTTGTTATACTATAATTTTTGTTTTCAAAAGACATAGTTGCTGTCTTCTCAGTTGAAGAACTTTTGTTAAGCTTCTTTTAATTTCTTTTTCCTTCTGGCCATAACTTCTATTTTACCTTTTTCTGGTTTTCAAATATTTTCATCTGTTTGTCTGACTTGCGTTGGTTTTACTTGTTGCTACTTTGAAGTATGCAGAGGCACATTGGCTGGCTTTCAAAAGGATGATGAGTAGATCTGAAGATTTTGATCAGAGGCATTAAGATTGCTTTTAAAAGCGATGTACTTCAGAATTCTAGATCTTTTAGAAAGCTGTGTGGTATATAGTTTAACAGAAATGTATTCTGACTTCAACTTTGGGGTGAAAACTGAAATCAATAGTGTTTGATTTTGGATTGAATAGTGTCTTGGTTACCCTGGTTTCCCACTCTAGGTTTGTAATTTTTTTTGGCAATTATCTTGTTATTTGAACTAAATGACAATAAAATTTCATAGATTAGAACCTTTCTTTAACTTTGGCAAT

mRNA sequence

TGTTGATGTTAGTATTCTCCGTTTGCTCCCCTCAGTTCTTCAATCTTCATCCTCTCTCTGGCTTTCAATTCCCTCTCTTTCTCTCTTTCTCTCAAACCCTAATCACATTTCCATGGTAGGATCTAATTCTTCTCGTCGCATTTCTGTTCATCAAGCCCTTGGCGGTGGTCATGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATGCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCATCATTCTTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCAATGGTTGCCAATGAACTGCGATTTTGTATCAATTTTGCACTTTCTATAGCACGCGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGGGTCCTTCTCAGTCTGTCAGCTCCTATAGTGTATGACAAATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAGGAAGCTTGATGAGAATGTTTTAAGGAAGATTCCATTGCCCTTAAATAAGGAGAAGAAGATGCAATAGGCACAGTACCTCGTTTTATGATCGGTAGCTTCAAAAGAAAGGCACATTGGCTGGCTTTCAAAAGGATGATGAGTAGATCTGAAGATTTTGATCAGAGGCATTAAGATTGCTTTTAAAAGCGATGTACTTCAGAATTCTAGATCTTTTAGAAAGCTGTGTGGTATATAGTTTAACAGAAATGTATTCTGACTTCAACTTTGGGGTGAAAACTGAAATCAATAGTGTTTGATTTTGGATTGAATAGTGTCTTGGTTACCCTGGTTTCCCACTCTAGGTTTGTAATTTTTTTTGGCAATTATCTTGTTATTTGAACTAAATGACAATAAAATTTCATAGATTAGAACCTTTCTTTAACTTTGGCAAT

Coding sequence (CDS)

ATGGTAGGATCTAATTCTTCTCGTCGCATTTCTGTTCATCAAGCCCTTGGCGGTGGTCATGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATGCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCATCATTCTTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCAATGGTTGCCAATGAACTGCGATTTTGTATCAATTTTGCACTTTCTATAGCACGCGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGGGTCCTTCTCAGTCTGTCAGCTCCTATAGTGTATGACAAATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAGGAAGCTTGATGAGAATGTTTTAAGGAAGATTCCATTGCCCTTAAATAAGGAGAAGAAGATGCAATAG

Protein sequence

MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYRKLDENVLRKIPLPLNKEKKMQ*

Homology

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BLAST of Cucsa.244630 vs. Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.7e-64
Identity = 122/203 (60.10%), Postives = 153/203 (75.37%), Query Frame = 1


Query: 5   NSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLL 64
           +SS R+SVHQ+LG G VAD+LLW+   G V++L S+T  W+LFERAGYN LSFV+NVLLL
Sbjct: 6   SSSSRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLL 65

Query: 65  LVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLK 124
           LV I F WAKSA++LNRPLPP+P++EI EE  +  A++LR  IN+ LSIA DI I RN  
Sbjct: 66  LVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPI 125

Query: 125 LFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQ 184
             LQV+L LW +S++G+  N LTLVYIGVLLSLS PIVY+KYQDHIDEK+  T ++ +  
Sbjct: 126 RLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVR-- 185

Query: 185 YRKLDENVLRKIPLPLNKEKKMQ 208
                 N+ RK PLP+NKEKK Q
Sbjct: 186 ------NISRKFPLPINKEKKHQ 200

[Close]

BLAST of Cucsa.244630 vs. Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.2e-59
Identity = 112/198 (56.57%), Postives = 148/198 (74.75%), Query Frame = 1


Query: 11  SVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLVIILF 70
           SVHQ++  G VAD+++WK   GG ++L S T LW+LFE+ GY+F  FV N  LL V+ILF
Sbjct: 4   SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63

Query: 71  FWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLFLQVA 130
            WAKSA L NRP+P LP+LEI+EE V MVA+ +R  IN  L++AR+I +GRN K   +V+
Sbjct: 64  LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123

Query: 131 LALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYRKLDE 190
           + LW VSF+G+F NFLT++Y+GV+LSL  P +Y++YQD IDEKL +THR  Q QYRK+DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

Query: 191 NVLRK-IPLPLNKEKKMQ 208
            +L+K I  P NK KKMQ
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201

[Close]

BLAST of Cucsa.244630 vs. Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37
Identity = 76/197 (38.58%), Postives = 126/197 (63.96%), Query Frame = 1


Query: 8   RRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLVI 67
           R+I+VHQ +GGG  AD+LLW++    + ++  +T  W +FE +G  FLS  ++VLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 68  ILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLFL 127
           I F  A+ ++  NR L  LP+L +SEE V+  A   R  +N  L +A D+ +G + +LF 
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 128 QVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYRK 187
           +V + LW++S IGS+ +  TL+YIG +LS++ P +Y KYQ  +D+     HR     Y+ 
Sbjct: 148 KVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 207

Query: 188 LDENVLRKIPLPLNKEK 205
           +DENV+ ++   L+K+K
Sbjct: 208 VDENVISRLSWSLSKDK 224

[Close]

BLAST of Cucsa.244630 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 86/204 (42.16%), Postives = 124/204 (60.78%), Query Frame = 1


Query: 8   RRISVHQALGGGHVADVLLW--KKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLL 67
           R   VH+ LGGG  AD+ +W  KK  GGV  L  ATA W +FE   Y+ L+ + +V++++
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGV--LGGATAAWVVFELMEYHLLTLLCHVMIVV 135

Query: 68  VIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKL 127
           + +LF W+ +   +N+  P +P++ I EE +  +A+ LR  IN   S  R+IA GR+LK 
Sbjct: 136 LAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKK 195

Query: 128 FLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHID---EKLCVTHRYAQ 187
           FL     LW++S +G  FNFLTL YI ++L  + P+ YDKY+D +D   EK  +     +
Sbjct: 196 FLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIE---LK 255

Query: 188 MQYRKLDENVLRKIPL-PLNKEKK 206
            QY  LDE VL KIPL PL  +KK
Sbjct: 256 KQYAVLDEKVLSKIPLGPLKNKKK 274

[Close]

BLAST of Cucsa.244630 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-37
Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = 1


Query: 8   RRISVHQALGGGHVADVLLW--KKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLL 67
           R   VH+ LGGG  ADV LW  KK  G V  L  ATA+W LFE   Y+ LS + ++ +L 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAV--LGVATAIWVLFELVEYHLLSLLCHISILA 114

Query: 68  VIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKL 127
           +  LF W+ + +L+N+  P +P++ + EE+  +VA+ LR  +N A  I R IA+GR+LK 
Sbjct: 115 LGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKK 174

Query: 128 FLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY 187
           FL V + LWI+S +G++FNFLTLVYI  ++  + P++Y+K++D +D       +  Q QY
Sbjct: 175 FLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQY 234

Query: 188 RKLDENVLRKIPLPLNKEK 205
              DE VL KIP+   K K
Sbjct: 235 VVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Cucsa.244630 vs. TrEMBL
Match: A0A0A0L980_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_3G199610 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 3.9e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN
Sbjct: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG
Sbjct: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY
Sbjct: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
           AQMQYRKLDENVLRKIPLPLNKEKKMQ
Sbjct: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]

BLAST of Cucsa.244630 vs. TrEMBL
Match: A0A061E058_THECC (Reticulon-like protein OS=Theobroma cacao GN=TCM_007136 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.0e-88
Identity = 165/206 (80.10%), Postives = 184/206 (89.32%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  SN   R+SVHQALGGG VADVLLW+KWCGGVVML SAT LWYLFERAGYNFLSFVAN
Sbjct: 47  MGDSNPIPRLSVHQALGGGPVADVLLWRKWCGGVVMLASATTLWYLFERAGYNFLSFVAN 106

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV+ILFFWAKSASLLNRPLPPLP+LEISE++V  VA+EL+  IN+ALSIA DIAIG
Sbjct: 107 VLLLLVVILFFWAKSASLLNRPLPPLPNLEISEKTVGKVADELQVWINYALSIAHDIAIG 166

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNLKLFL+VA+ LW++S+IGS FNFLTLVYIGV+LSLS P+VYDKYQ HI+EKL VTHR 
Sbjct: 167 RNLKLFLEVAVGLWLLSYIGSLFNFLTLVYIGVILSLSVPLVYDKYQHHINEKLSVTHRI 226

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKM 207
            QMQYRK+DE VLRK+PLP NKEKKM
Sbjct: 227 IQMQYRKIDETVLRKLPLPSNKEKKM 252

[Close]

BLAST of Cucsa.244630 vs. TrEMBL
Match: W9S660_9ROSA (Reticulon-like protein OS=Morus notabilis GN=L484_027478 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.2e-82
Identity = 153/207 (73.91%), Postives = 175/207 (84.54%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  S+ SRR SVHQA G G VADVLLWKKW  GVV+L SATALW+LFERAGYN LSFV+N
Sbjct: 1   MGDSSPSRRFSVHQAFGDGFVADVLLWKKWSVGVVLLVSATALWFLFERAGYNPLSFVSN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV+ILFFWAKSASLLNRPLPPLPDLEISE SV M A+ LR  +N  +S ARDIAIG
Sbjct: 61  VLLLLVVILFFWAKSASLLNRPLPPLPDLEISEASVMMAADVLRVWVNRVMSTARDIAIG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RN KLFLQVA  LW+ S++GS FNFLTL YI VLLSLS P++YDKYQDHID+K+CVTH+ 
Sbjct: 121 RNWKLFLQVAFGLWVASYVGSLFNFLTLAYIAVLLSLSVPVLYDKYQDHIDDKVCVTHKL 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
            Q QYRK+DE++ +KIP+PLNKEKK+Q
Sbjct: 181 IQTQYRKIDESLRKKIPIPLNKEKKVQ 207

[Close]

BLAST of Cucsa.244630 vs. TrEMBL
Match: V4SBI5_9ROSI (Reticulon-like protein OS=Citrus clementina GN=CICLE_v10029287mg PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-81
Identity = 153/207 (73.91%), Postives = 178/207 (85.99%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  S+S  RISVHQALGGG VADVLLW+K CGGVV+L S+T LW+LFERAGYNFLSFV+N
Sbjct: 1   MGDSHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV ILFFW KSASLLNRPLPPLPDLEIS++SV   A+E++  +N ALSIARDIA+G
Sbjct: 61  VLLLLVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNL  FLQVA  LW+VS++GS FNFLTLVYIGVLLSLS P++Y+K+QDHIDEKLC   R 
Sbjct: 121 RNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRV 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
            QMQYRK+DE++L+KIPLP NK+KK Q
Sbjct: 181 IQMQYRKIDESLLKKIPLPQNKQKKTQ 207

[Close]

BLAST of Cucsa.244630 vs. TrEMBL
Match: A0A067F9F1_CITSI (Reticulon-like protein OS=Citrus sinensis GN=CISIN_1g0285691mg PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-81
Identity = 153/207 (73.91%), Postives = 178/207 (85.99%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  S+S  RISVHQALGGG VADVLLW+K CGGVV+L S+T LW+LFERAGYNFLSFV+N
Sbjct: 1   MGDSHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV ILFFW KSASLLNRPLPPLPDLEIS++SV   A+E++  +N ALSIARDIA+G
Sbjct: 61  VLLLLVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNL  FLQVA  LW+VS++GS FNFLTLVYIGVLLSLS P++Y+K+QDHIDEKLC   R 
Sbjct: 121 RNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRV 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
            QMQYRK+DE++L+KIPLP NK+KK Q
Sbjct: 181 IQMQYRKIDESLLKKIPLPQNKQKKTQ 207

[Close]

BLAST of Cucsa.244630 vs. TAIR10
Match: AT2G15280.1 (AT2G15280.1 Reticulon family protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.4e-60
Identity = 112/198 (56.57%), Postives = 148/198 (74.75%), Query Frame = 1


Query: 11  SVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLVIILF 70
           SVHQ++  G VAD+++WK   GG ++L S T LW+LFE+ GY+F  FV N  LL V+ILF
Sbjct: 4   SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63

Query: 71  FWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLFLQVA 130
            WAKSA L NRP+P LP+LEI+EE V MVA+ +R  IN  L++AR+I +GRN K   +V+
Sbjct: 64  LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123

Query: 131 LALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYRKLDE 190
           + LW VSF+G+F NFLT++Y+GV+LSL  P +Y++YQD IDEKL +THR  Q QYRK+DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

Query: 191 NVLRK-IPLPLNKEKKMQ 208
            +L+K I  P NK KKMQ
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201

[Close]

BLAST of Cucsa.244630 vs. TAIR10
Match: AT3G19460.2 (AT3G19460.2 Reticulon family protein)

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-50
Identity = 111/221 (50.23%), Postives = 137/221 (61.99%), Query Frame = 1


Query: 21  VADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLVIILFFWAKSASLLN 80
           VAD+LLW+   G V++L S+T  W+LFERAGYN LSFV+NVLLLLV I F WAKSA++LN
Sbjct: 6   VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65

Query: 81  RPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLFLQVAL-ALWIV--- 140
           RPLPP+P++EI EE  +  A++LR  IN+ LSIA DI I RN    LQV    LW     
Sbjct: 66  RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTICC 125

Query: 141 ------------------------------SFIGSFFNFLTLVYIGVLLSLSAPIVYDKY 200
                                         S++G+  N LTLVYIGVLLSLS PIVY+KY
Sbjct: 126 IFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKY 185

Query: 201 QDHIDEKLCVTHRYAQMQYRKLDENVLRKIPLPLNKEKKMQ 208
           QDHIDEK+  T ++ +        N+ RK PLP+NKEKK Q
Sbjct: 186 QDHIDEKVNSTSKFVR--------NISRKFPLPINKEKKHQ 218

[Close]

BLAST of Cucsa.244630 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 157.5 bits (397), Expect = 8.7e-39
Identity = 86/204 (42.16%), Postives = 124/204 (60.78%), Query Frame = 1


Query: 8   RRISVHQALGGGHVADVLLW--KKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLL 67
           R   VH+ LGGG  AD+ +W  KK  GGV  L  ATA W +FE   Y+ L+ + +V++++
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGV--LGGATAAWVVFELMEYHLLTLLCHVMIVV 135

Query: 68  VIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKL 127
           + +LF W+ +   +N+  P +P++ I EE +  +A+ LR  IN   S  R+IA GR+LK 
Sbjct: 136 LAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKK 195

Query: 128 FLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHID---EKLCVTHRYAQ 187
           FL     LW++S +G  FNFLTL YI ++L  + P+ YDKY+D +D   EK  +     +
Sbjct: 196 FLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIE---LK 255

Query: 188 MQYRKLDENVLRKIPL-PLNKEKK 206
            QY  LDE VL KIPL PL  +KK
Sbjct: 256 KQYAVLDEKVLSKIPLGPLKNKKK 274

[Close]

BLAST of Cucsa.244630 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-38
Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = 1


Query: 8   RRISVHQALGGGHVADVLLW--KKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLL 67
           R   VH+ LGGG  ADV LW  KK  G V  L  ATA+W LFE   Y+ LS + ++ +L 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAV--LGVATAIWVLFELVEYHLLSLLCHISILA 114

Query: 68  VIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKL 127
           +  LF W+ + +L+N+  P +P++ + EE+  +VA+ LR  +N A  I R IA+GR+LK 
Sbjct: 115 LGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKK 174

Query: 128 FLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY 187
           FL V + LWI+S +G++FNFLTLVYI  ++  + P++Y+K++D +D       +  Q QY
Sbjct: 175 FLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQY 234

Query: 188 RKLDENVLRKIPLPLNKEK 205
              DE VL KIP+   K K
Sbjct: 235 VVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Cucsa.244630 vs. TAIR10
Match: AT3G54120.1 (AT3G54120.1 Reticulon family protein)

HSP 1 Score: 145.2 bits (365), Expect = 4.5e-35
Identity = 70/164 (42.68%), Postives = 111/164 (67.68%), Query Frame = 1


Query: 7   SRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLV 66
           +R  ++H+ LGGG VADV+LW+K    V ++T   A W +FE   Y   + +++VLLLL+
Sbjct: 10  NRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLL 69

Query: 67  IILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLF 126
            ILF W+KSAS+LNRP PPLP+ +ISE      +  LR  +N  L ++ DIA+ R+ +L+
Sbjct: 70  SILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELY 129

Query: 127 LQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHI 171
            +VA++L+++S IGS  +F TL +  VL+ ++ P  Y++Y+D+I
Sbjct: 130 TKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173

[Close]

BLAST of Cucsa.244630 vs. NCBI nr
Match: gi|778680027|ref|XP_004140714.2| (PREDICTED: reticulon-like protein B11 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 5.6e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN
Sbjct: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG
Sbjct: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY
Sbjct: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
           AQMQYRKLDENVLRKIPLPLNKEKKMQ
Sbjct: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]

BLAST of Cucsa.244630 vs. NCBI nr
Match: gi|659112323|ref|XP_008456165.1| (PREDICTED: reticulon-like protein B11 isoform X1 [Cucumis melo])

HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-110
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN
Sbjct: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRF INFALSIARDIAIG
Sbjct: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFWINFALSIARDIAIG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY
Sbjct: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
           AQMQYRKLDENVLRKIPLPLNKEKKMQ
Sbjct: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]

BLAST of Cucsa.244630 vs. NCBI nr
Match: gi|590686937|ref|XP_007042524.1| (Reticulon family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88
Identity = 165/206 (80.10%), Postives = 184/206 (89.32%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  SN   R+SVHQALGGG VADVLLW+KWCGGVVML SAT LWYLFERAGYNFLSFVAN
Sbjct: 47  MGDSNPIPRLSVHQALGGGPVADVLLWRKWCGGVVMLASATTLWYLFERAGYNFLSFVAN 106

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV+ILFFWAKSASLLNRPLPPLP+LEISE++V  VA+EL+  IN+ALSIA DIAIG
Sbjct: 107 VLLLLVVILFFWAKSASLLNRPLPPLPNLEISEKTVGKVADELQVWINYALSIAHDIAIG 166

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNLKLFL+VA+ LW++S+IGS FNFLTLVYIGV+LSLS P+VYDKYQ HI+EKL VTHR 
Sbjct: 167 RNLKLFLEVAVGLWLLSYIGSLFNFLTLVYIGVILSLSVPLVYDKYQHHINEKLSVTHRI 226

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKM 207
            QMQYRK+DE VLRK+PLP NKEKKM
Sbjct: 227 IQMQYRKIDETVLRKLPLPSNKEKKM 252

[Close]

BLAST of Cucsa.244630 vs. NCBI nr
Match: gi|703142966|ref|XP_010107890.1| (Reticulon-like protein [Morus notabilis])

HSP 1 Score: 312.4 bits (799), Expect = 6.0e-82
Identity = 153/207 (73.91%), Postives = 175/207 (84.54%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  S+ SRR SVHQA G G VADVLLWKKW  GVV+L SATALW+LFERAGYN LSFV+N
Sbjct: 1   MGDSSPSRRFSVHQAFGDGFVADVLLWKKWSVGVVLLVSATALWFLFERAGYNPLSFVSN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV+ILFFWAKSASLLNRPLPPLPDLEISE SV M A+ LR  +N  +S ARDIAIG
Sbjct: 61  VLLLLVVILFFWAKSASLLNRPLPPLPDLEISEASVMMAADVLRVWVNRVMSTARDIAIG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RN KLFLQVA  LW+ S++GS FNFLTL YI VLLSLS P++YDKYQDHID+K+CVTH+ 
Sbjct: 121 RNWKLFLQVAFGLWVASYVGSLFNFLTLAYIAVLLSLSVPVLYDKYQDHIDDKVCVTHKL 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
            Q QYRK+DE++ +KIP+PLNKEKK+Q
Sbjct: 181 IQTQYRKIDESLRKKIPIPLNKEKKVQ 207

[Close]

BLAST of Cucsa.244630 vs. NCBI nr
Match: gi|567860560|ref|XP_006422934.1| (hypothetical protein CICLE_v10029287mg [Citrus clementina])

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-81
Identity = 153/207 (73.91%), Postives = 178/207 (85.99%), Query Frame = 1


Query: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60
           M  S+S  RISVHQALGGG VADVLLW+K CGGVV+L S+T LW+LFERAGYNFLSFV+N
Sbjct: 1   MGDSHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSN 60

Query: 61  VLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120
           VLLLLV ILFFW KSASLLNRPLPPLPDLEIS++SV   A+E++  +N ALSIARDIA+G
Sbjct: 61  VLLLLVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMG 120

Query: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180
           RNL  FLQVA  LW+VS++GS FNFLTLVYIGVLLSLS P++Y+K+QDHIDEKLC   R 
Sbjct: 121 RNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRV 180

Query: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 208
            QMQYRK+DE++L+KIPLP NK+KK Q
Sbjct: 181 IQMQYRKIDESLLKKIPLPQNKQKKTQ 207

The following BLAST results are available for this feature:

BLAST of Cucsa.244630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLK_ARATH	9.7e-64	60.10	Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1	[more]
RTNLJ_ARATH	4.2e-59	56.57	Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1	[more]
RTNLP_ARATH	1.2e-37	38.58	Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1	[more]
RTNLA_ARATH	1.6e-37	42.16	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	[more]
RTNLE_ARATH	3.5e-37	42.71	Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1	[more]

BLAST of Cucsa.244630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L980_CUCSA	3.9e-112	100.00	Reticulon-like protein OS=Cucumis sativus GN=Csa_3G199610 PE=4 SV=1	[more]
A0A061E058_THECC	1.0e-88	80.10	Reticulon-like protein OS=Theobroma cacao GN=TCM_007136 PE=4 SV=1	[more]
W9S660_9ROSA	4.2e-82	73.91	Reticulon-like protein OS=Morus notabilis GN=L484_027478 PE=4 SV=1	[more]
V4SBI5_9ROSI	1.2e-81	73.91	Reticulon-like protein OS=Citrus clementina GN=CICLE_v10029287mg PE=4 SV=1	[more]
A0A067F9F1_CITSI	1.2e-81	73.91	Reticulon-like protein OS=Citrus sinensis GN=CISIN_1g0285691mg PE=4 SV=1	[more]

BLAST of Cucsa.244630 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15280.1	2.4e-60	56.57	Reticulon family protein	[more]
AT3G19460.2	1.0e-50	50.23	Reticulon family protein	[more]
AT4G23630.1	8.7e-39	42.16	VIRB2-interacting protein 1	[more]
AT2G46170.1	1.9e-38	42.71	Reticulon family protein	[more]
AT3G54120.1	4.5e-35	42.68	Reticulon family protein	[more]

BLAST of Cucsa.244630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680027\|ref\|XP_004140714.2\|	5.6e-112	100.00	PREDICTED: reticulon-like protein B11 [Cucumis sativus]	[more]
gi\|659112323\|ref\|XP_008456165.1\|	1.1e-110	99.52	PREDICTED: reticulon-like protein B11 isoform X1 [Cucumis melo]	[more]
gi\|590686937\|ref\|XP_007042524.1\|	1.5e-88	80.10	Reticulon family protein isoform 1 [Theobroma cacao]	[more]
gi\|703142966\|ref\|XP_010107890.1\|	6.0e-82	73.91	Reticulon-like protein [Morus notabilis]	[more]
gi\|567860560\|ref\|XP_006422934.1\|	1.8e-81	73.91	hypothetical protein CICLE_v10029287mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.244630.2	Cucsa.244630.2	mRNA
Cucsa.244630.1	Cucsa.244630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 21..174 score: 6.9
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 21..207 score: 37
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 11..207 score: 6.3E
None	No IPR available	PANTHER	PTHR10994:SF77	RETICULON-LIKE PROTEIN B10-RELATED	coord: 11..207 score: 6.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.244630	Cla013096	Watermelon (97103) v1	cgywmB462
Cucsa.244630	Csa3G199610	Cucumber (Chinese Long) v2	cgycuB350
Cucsa.244630	MELO3C019545	Melon (DHL92) v3.5.1	cgymeB417
Cucsa.244630	ClCG05G010270	Watermelon (Charleston Gray)	cgywcgB433
Cucsa.244630	CSPI03G18160	Wild cucumber (PI 183967)	cgycpiB366
Cucsa.244630	CmaCh16G003440	Cucurbita maxima (Rimu)	cgycmaB0685
Cucsa.244630	CmaCh04G004730	Cucurbita maxima (Rimu)	cgycmaB0687
Cucsa.244630	CmoCh04G005070	Cucurbita moschata (Rifu)	cgycmoB0687
Cucsa.244630	Lsi05G002360	Bottle gourd (USVL1VR-Ls)	cgylsiB404
Cucsa.244630	Cp4.1LG01g02500	Cucurbita pepo (Zucchini)	cgycpeB0654
Cucsa.244630	MELO3C019545.2	Melon (DHL92) v3.6.1	cgymedB412
Cucsa.244630	CsaV3_3G018220	Cucumber (Chinese Long) v3	cgycucB369
Cucsa.244630	Cla97C05G092650	Watermelon (97103) v2	cgywmbB435
Cucsa.244630	Bhi01G001280	Wax gourd	cgywgoB493
Cucsa.244630	Carg19666	Silver-seed gourd	carcgyB0345
Cucsa.244630	Carg08144	Silver-seed gourd	carcgyB0436

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.244630	Cucurbita pepo (Zucchini)	cgycpeB0652
Cucsa.244630	Bottle gourd (USVL1VR-Ls)	cgylsiB403
Cucsa.244630	Melon (DHL92) v3.6.1	cgymedB411
Cucsa.244630	Cucumber (Chinese Long) v3	cgycucB370
Cucsa.244630	Watermelon (97103) v2	cgywmbB434
Cucsa.244630	Wax gourd	cgywgoB494
Cucsa.244630	Cucumber (Gy14) v1	cgycgyB117
Cucsa.244630	Cucurbita maxima (Rimu)	cgycmaB0684
Cucsa.244630	Cucurbita moschata (Rifu)	cgycmoB0684
Cucsa.244630	Cucurbita moschata (Rifu)	cgycmoB0685
Cucsa.244630	Wild cucumber (PI 183967)	cgycpiB367
Cucsa.244630	Cucumber (Chinese Long) v2	cgycuB351
Cucsa.244630	Melon (DHL92) v3.5.1	cgymeB416
Cucsa.244630	Watermelon (Charleston Gray)	cgywcgB432
Cucsa.244630	Watermelon (97103) v1	cgywmB463