Cp4.1LG01g01740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g01740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane protein, putative
LocationCp4.1LG01 : 2874334 .. 2877355 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGTGGATGGTAGTGGATGGATAGGTTGGGGGGGAAATGATGAAATCTTTGGGAATCCAGTCTCTCCATAGTTGCAGTCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGGTACCCTTTACTGCATTTCTTTTTTAAGTTTTGACTCTTTGGAATACACGTTTTGTGATTGTTTTAGTCTAGGAATGAATTGGGGTTCTGCTGCTTTCTTATTCCTTTGCCTTGTTTTTTTGCACGCCATGTGTTTGAAGAAAGTCTTCATAGAAACTGCCTGCGGTTTCTAAGTTGTTCACTATAGGGTTCAACTCGGTATCAAATTTGTTATGATGTAATTGGGGTCTTATGTATTCTTAGTCTAGTGCCTAGTAGAGTAGTTAGATGAACATGCAAAATTCATTTGAAGTGGTGGCTGGCCATGGCTACCTAGATATAGGAGCTGTTTGTTCATCTGCATTGTCTTCCGGCCTCTTTTTTGACCCTCAAGGAAGTCATATCAGTTACGAAGAAGCTGAAATATTGGATGGGGACAATTGACTATGGTAGTTGTGAGATCCCACGTCAGTTGTAGAGGGGAATGAAGCATTTTTATAAGGGTGTGGAAACCTCTCCCTAACAAACGCGTTTCCAAATTGTGAGGCTGACGCCGATATGTAACGGGTCAAAGCGGACAATATCTGCTAGTAGTGAGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTGAGCGGTGTGCCAGCGAGGACGCTGGGCCTTGAAGGGGGGTTAATTGTGAGATCCCACATCGGTTGTAGAGGGGAACGAAACATTTTTTACAAGGGTATGGAAACCTCTTCCTAACAAACACGTTTCTAAACTGTGAGGTTGTCGGCGTTACGTAGTAGGCCAAAGCGAACAATATTTGCTAGTGGTGAGTTTGGGTTATTACAAATGGTATCAAAGTTACGCACCGAGCGGTGTGCCAATAAGTACGTTGGGCCCCAAAGAGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGAGAACAAAACATTGTTTTTTACAAGGGTGTGGAAACTTCTCCCTAACAAACGCGTTCTAAAACCATGAGGCTGACGACGATATGTAACGGACGAAAACAGACAATATCTACTATTGGTGGGTTTGGACTGTTTATGTCTTCCGGCCTCTTTTTTTCCCTCAAGGAAGTCACATCAGTTAAGAAGAAGTTGAAAATATTGGATGGGAGACAATTGATTATGGTAGAGATTTACTAATTATATGGACTGTTCATGCCTCAATGTTGAAACATCTTTGAAGGATATATTTAGATTCTGGAATCATAATATGTTGGCTGTAAGATTTGGCGGTGAGGGTGAATCAGAGAATGTTTGAATGGAACTGTCTTAGATTTGGAAAAAACAATATTCATCTTTGTCCTCTAAGCGTTCACTTTGGAGTTCTATCTTTCACTATAATTCCAATGTAATAATCATTTGCTGGGCTGCTTTCTTTTTATGAACATGATGGTTCTTTGAATTGATTTCTTTTGTTCCCATATAACAATTGGAAGTTCTATGACTTTTTGTGCCCATTTTAGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTATGCTCTTGTGGTTACTTCATCCTTATATATGTTTCGATTATTTCGTTGTCATTTCTGATCTGGACAGCTAATGGTAATATGATTTGAGCTAGAAATAGTTGAACAAGTGTTGCTTGTTTTTCACTAAGAGAACTATTGGATTAATATCTTGTAAATTGCACCAATAACAAACAAGAAAATTTGAAACCTTTGTGGATTGATGTTCTGCTACTTTTCTGTTCTTTTAGGTTCGACAGCTGACGATAACGATAAGGTAACTTCCTCGCCTTGTTCTAACATATCTTGAAGTTAGATGAAACATTAGCGACCGATTCTTATCTCGTATTTGCAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTTTAGTATCATCTTCTTCATTTTGAGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCTGACACTAAACTATGGATGAACAATGTATTTTAGCAACTGACGACCTCCCGACTTTCCTTTGCATCCCCCT

mRNA sequence

TGAAGTGGATGGTAGTGGATGGATAGGTTGGGGGGGAAATGATGAAATCTTTGGGAATCCAGTCTCTCCATAGTTGCAGTCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTTCGACAGCTGACGATAACGATAAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTTTAGTATCATCTTCTTCATTTTGAGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCTGACACTAAACTATGGATGAACAATGTATTTTAGCAACTGACGACCTCCCGACTTTCCTTTGCATCCCCCT

Coding sequence (CDS)

ATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTTCGACAGCTGACGATAACGATAAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGA

Protein sequence

MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELSAAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS
Homology
[Close]
BLAST of Cp4.1LG01g01740 vs. TrEMBL
Match: V4UR94_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009151mg PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.6e-73
Identity = 170/279 (60.93%), Postives = 208/279 (74.55%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQ--QCFCFPQFSE 60
           ML T +LLS  NFP ++S        P   + L +P  S S  P R    + +C  Q  E
Sbjct: 1   MLQTHHLLSL-NFPFTVSH------HPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE 60

Query: 61  ----LSAAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
               ++A   +++GP+ELP +IFATTD+PSS+QVATSVLLTGAISVFLFR+LRRRAKR K
Sbjct: 61  PTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRS+G KKSLK+EA+++LKA+ +  I++K  PSP+Q  LG + AGVIA+ILYKFTTT
Sbjct: 121 ELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNG+CYLATFVFGIN+VGLFLYSGQLALNS  E+
Sbjct: 181 IEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTED 240

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
            S  KE    G++Q  S NST E   D TE +S K+DQS
Sbjct: 241 SSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQS 271

[Close]
BLAST of Cp4.1LG01g01740 vs. TrEMBL
Match: A0A067ETL5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023825mg PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.6e-73
Identity = 170/279 (60.93%), Postives = 208/279 (74.55%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQ--QCFCFPQFSE 60
           ML T +LLS  NFP ++S        P   + L +P  S S  P R    + +C  Q  E
Sbjct: 1   MLQTHHLLSL-NFPFTVSH------HPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE 60

Query: 61  ----LSAAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
               ++A   +++GP+ELP +IFATTD+PSS+QVATSVLLTGAISVFLFR+LRRRAKR K
Sbjct: 61  PTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRS+G KKSLK+EA+++LKA+ +  I++K  PSP+Q  LG + AGVIA+ILYKFTTT
Sbjct: 121 ELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNG+CYLATFVFGIN+VGLFLYSGQLALNS  E+
Sbjct: 181 IEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTED 240

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
            S  KE    G++Q  S NST E   D TE +S K+DQS
Sbjct: 241 SSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQS 271

[Close]
BLAST of Cp4.1LG01g01740 vs. TrEMBL
Match: W9R7B4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012166 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-69
Identity = 166/272 (61.03%), Postives = 201/272 (73.90%), Query Frame = 1 

Query: 10  SSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELSAAAAADD-- 69
           +SNFP SLS  H L    P  +  HRP       P   Q        SE + + A  +  
Sbjct: 11  TSNFPFSLSHHHFL---SPSLNFPHRPRLRTLYSPRPKQPWLAAQATSEPTTSTAKPEEE 70

Query: 70  --GPIEL--PST-IFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAG 129
             GP+E   PST IFAT DDPS IQVATSVLLTGAISVFLFR+LRRRA+R KELKFRS+G
Sbjct: 71  EGGPVEFFTPSTPIFATDDDPSPIQVATSVLLTGAISVFLFRALRRRARRAKELKFRSSG 130

Query: 130 VKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALNRQ 189
           VKKSLKEEA+++LKA+ +  IESK  PSP+Q  LGAI+AGVIA+ILYKFTTTIEAALN+Q
Sbjct: 131 VKKSLKEEALDNLKAMGSASIESKGPPSPVQALLGAISAGVIAVILYKFTTTIEAALNQQ 190

Query: 190 TVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKEPA 249
           T+SD++S RQ+TIT+RTIVNG+CYLATF+FGIN++GLFLY+GQLA+NS M EGS D+E  
Sbjct: 191 TISDSYSARQITITVRTIVNGLCYLATFIFGINSIGLFLYAGQLAINSFM-EGSTDEETE 250

Query: 250 TKGDKQVSSPNSTVETTL---DGTESSSSKDD 272
           +KG +Q+SS NSTVE      D +E + S DD
Sbjct: 251 SKGGEQLSSTNSTVENPTSAGDSSEDNQSSDD 278

[Close]
BLAST of Cp4.1LG01g01740 vs. TrEMBL
Match: B9SB97_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0649730 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-69
Identity = 164/275 (59.64%), Postives = 204/275 (74.18%), Query Frame = 1 

Query: 5   INLLSSSNFPLSLSLTHSLLLSPPPF--STLHRPITSPSVLPLRTQQCFCFPQFSELSAA 64
           ++L SS + P SLS   +L  S P    ++   P+T PS  P                  
Sbjct: 27  LSLTSSFSKPTSLSTFSALPPSKPDIWLASEPTPVTPPSPSP------------------ 86

Query: 65  AAADDGPIELP----STIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKF 124
              +DGPIELP     +IFATTDDPS IQVATSVLLTG+I VFLFR+LRRRAKR KELKF
Sbjct: 87  --EEDGPIELPFPSSPSIFATTDDPSPIQVATSVLLTGSIGVFLFRALRRRAKRAKELKF 146

Query: 125 RSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAA 184
           RS+G KK++KEEA++SLKA+ +  I+++  PSP+QTFLG ++A VIALILYKFTTTIEAA
Sbjct: 147 RSSGAKKTMKEEALDSLKAMGSASIDAQKPPSPLQTFLGGVSAAVIALILYKFTTTIEAA 206

Query: 185 LNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSED 244
           LNRQTVSDNFSVRQ+TIT+RTI+NG+CYLATFVFG+N+VGLFLYSGQLA+NS M EGS  
Sbjct: 207 LNRQTVSDNFSVRQITITVRTIINGLCYLATFVFGLNSVGLFLYSGQLAINSFM-EGSTS 266

Query: 245 KEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
           +E  +KG++Q  S NS  E+ +D TES+SS+ DQ+
Sbjct: 267 EESESKGNEQSGSLNSAPESPIDSTESNSSQGDQN 280

[Close]
BLAST of Cp4.1LG01g01740 vs. TrEMBL
Match: B9I1E4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10000g PE=4 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 2.2e-67
Identity = 171/280 (61.07%), Postives = 204/280 (72.86%), Query Frame = 1 

Query: 3   HTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRP-ITSP---SVLPL-RTQQCFCFPQFS 62
           H  + LS   FPLS   T+  L    P   L++P I +P   S LP  R        Q  
Sbjct: 7   HNFHPLSPQIFPLSHHHTNHHL---DPLKFLYKPPIFTPFNLSALPRSRPDPPLWLAQLP 66

Query: 63  ELSAAAAADDGPIEL---PSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 122
           E  A    ++GPIE+     +IFAT+DDPSSIQVATSVLLTGAISVFLFRSLRRRAKR K
Sbjct: 67  E-QAPEPEEEGPIEILRSSPSIFATSDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRSK 126

Query: 123 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 182
           ELKFRS+G KK+LKEEA++SLK   + PI+ K  PSP+Q FLGAI+AGVIALILYKF+TT
Sbjct: 127 ELKFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPPSPVQAFLGAISAGVIALILYKFSTT 186

Query: 183 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 242
           IEA+LNRQTVSDNFSVRQ+TIT+RTIVNG+CYLATFVFGIN+VGLFLYS QLA NS+ME 
Sbjct: 187 IEASLNRQTVSDNFSVRQITITVRTIVNGLCYLATFVFGINSVGLFLYSAQLAFNSLMEA 246

Query: 243 GSED-KEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
           G+++  E  T G  Q  S NST ++  DG E +SS+ DQ+
Sbjct: 247 GTDEVTESTTSG--QSGSSNSTSDSATDGAELTSSQGDQN 280

[Close]
BLAST of Cp4.1LG01g01740 vs. TAIR10
Match: AT3G15110.1 (AT3G15110.1 unknown protein)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-60
Identity = 138/223 (61.88%), Postives = 165/223 (73.99%), Query Frame = 1 

Query: 62  AAAADDGPIELPST----------IFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 121
           A   +DGPIELP++          IFAT+DDP+ +Q+ATSVLLTGAI+VFL RS+RRRAK
Sbjct: 52  AEVEEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111

Query: 122 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIES-KSKPSPIQTFLGAIAAGVIALILYK 181
           R KEL FRS G KKSLKEEAM++LKA+S+ PIE   S PS  Q FLGAIAAGVIALILYK
Sbjct: 112 RAKELTFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171

Query: 182 FTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNS 241
           FT T+E+ LNRQT+SDNFSVRQ+T+T+RTI+NGICYLATFVFG+NA GL LYSGQLA N 
Sbjct: 172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYSGQLAFN- 231

Query: 242 VMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
             E+ +E+   AT      SS         D +E + S +DQS
Sbjct: 232 --EDSAEENMKATTQPGDSSSG--------DNSEVNKSNEDQS 263

[Close]
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: gi|778688583|ref|XP_011652784.1| (PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 2.5e-104
Identity = 223/279 (79.93%), Postives = 239/279 (85.66%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSL----SLTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
           M HT NLLSS NFPL      +  H L LSPP   S+LHRPIT  SV PL   +CFC PQ
Sbjct: 570 MWHTQNLLSS-NFPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSVSPLTNHRCFCLPQ 629

Query: 61  FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           F++L+ A   DD GP+ELP TIFATTDDPSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 630 FTDLADATFLDDNGPVELPPTIFATTDDPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 689

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRS GVKKSLKEEAM+SLKAISTGPIESKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 690 ELKFRSGGVKKSLKEEAMDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKFTTT 749

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEA+LNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 750 IEASLNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 809

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
           GS+D EP  K D+QVS P ST ETTLD TESS+SKDDQS
Sbjct: 810 GSKDTEPKAKSDEQVSPPTSTAETTLDSTESSNSKDDQS 847

[Close]
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: gi|659112411|ref|XP_008456207.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 1.6e-103
Identity = 222/279 (79.57%), Postives = 240/279 (86.02%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSL----SLTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
           M HT NLLSS N PL      +  H L LSPP   S+LHRPIT  S+ PL T +CFC PQ
Sbjct: 458 MWHTQNLLSS-NLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 517

Query: 61  FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           F++L+ A   DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 518 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 577

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 578 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 637

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 638 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 697

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
           GS+DKEP  K D+QVS P ST ETTL+ TESS+SKDDQS
Sbjct: 698 GSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQS 735

[Close]
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: gi|567919520|ref|XP_006451766.1| (hypothetical protein CICLE_v10009151mg [Citrus clementina])

HSP 1 Score: 284.3 bits (726), Expect = 2.3e-73
Identity = 170/279 (60.93%), Postives = 208/279 (74.55%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQ--QCFCFPQFSE 60
           ML T +LLS  NFP ++S        P   + L +P  S S  P R    + +C  Q  E
Sbjct: 1   MLQTHHLLSL-NFPFTVSH------HPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE 60

Query: 61  ----LSAAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
               ++A   +++GP+ELP +IFATTD+PSS+QVATSVLLTGAISVFLFR+LRRRAKR K
Sbjct: 61  PTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRS+G KKSLK+EA+++LKA+ +  I++K  PSP+Q  LG + AGVIA+ILYKFTTT
Sbjct: 121 ELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNG+CYLATFVFGIN+VGLFLYSGQLALNS  E+
Sbjct: 181 IEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTED 240

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
            S  KE    G++Q  S NST E   D TE +S K+DQS
Sbjct: 241 SSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQS 271

[Close]
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: gi|658029128|ref|XP_008350007.1| (PREDICTED: uncharacterized protein LOC103413308 [Malus domestica])

HSP 1 Score: 278.5 bits (711), Expect = 1.3e-71
Identity = 176/287 (61.32%), Postives = 215/287 (74.91%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPP-----PFSTLHRPIT-SPSVLPLRTQQCFCFP 60
           ML T +LL S NFP+ LS   +  LSPP     P + LH+P +  P     R        
Sbjct: 1   MLQTQHLLLS-NFPIFLSHPQTNFLSPPNLSPFPLTFLHKPTSLCPVSAHSRAGPEQWLA 60

Query: 61  QFSELSAAAA------ADDGPIELP---STIFATTDDPSSIQVATSVLLTGAISVFLFRS 120
           +  E + A        A DGP ELP   S +FAT DDPSS+QVATSVLLTGAI+VFLFRS
Sbjct: 61  EAPEPTTATPYTPLEFAPDGPEELPPSSSPVFATNDDPSSLQVATSVLLTGAITVFLFRS 120

Query: 121 LRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIA 180
           LRRRAKR KELK+RS+GVKKSLK+EA++SLKA+STG +E+K  PSP+Q  LG I+AGVIA
Sbjct: 121 LRRRAKRAKELKYRSSGVKKSLKDEALDSLKALSTGSVEAKGPPSPVQALLGGISAGVIA 180

Query: 181 LILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQ 240
           LILYKFTTTIEA+LNRQT+SDNFSVRQ+TITIRTI+NG+CYLATFVFGINAVGL LY+GQ
Sbjct: 181 LILYKFTTTIEASLNRQTISDNFSVRQITITIRTIINGLCYLATFVFGINAVGLVLYAGQ 240

Query: 241 LALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQ 273
           LA+NS+ME+ +ED +  T+G++Q  S NSTVE+  +  E +S+KDDQ
Sbjct: 241 LAINSIMEDINEDTQ--TQGEEQSGSLNSTVESPTNSGE-NSNKDDQ 283

[Close]
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: gi|694317935|ref|XP_009340517.1| (PREDICTED: uncharacterized protein LOC103932610 [Pyrus x bretschneideri])

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 176/288 (61.11%), Postives = 214/288 (74.31%), Query Frame = 1 

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPP-----PFSTLHRPIT-SPSVLPLRTQQCFCFP 60
           ML T +LL S NF + LS   +  LSPP     P + LH+P +  P     R        
Sbjct: 1   MLQTQHLLLS-NFHIFLSHPQTHFLSPPNLSPFPLTFLHKPTSLCPVSAHSRAGPEQWLA 60

Query: 61  QFSELSAAAA------ADDGPIELP---STIFATTDDPSSIQVATSVLLTGAISVFLFRS 120
           +  E + A        A DGP ELP   S +FAT DDPSS+QVATSVLLTGAI+VFLFRS
Sbjct: 61  EAQEPTTATPYTPLEFAPDGPEELPPSSSPVFATNDDPSSLQVATSVLLTGAITVFLFRS 120

Query: 121 LRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIA 180
           LRRRAKR KELK+RS+GVKKSLK+EA++SLKA+STG +E+K  PSP+Q  LG I+AGVIA
Sbjct: 121 LRRRAKRAKELKYRSSGVKKSLKDEALDSLKALSTGSVEAKGPPSPVQALLGGISAGVIA 180

Query: 181 LILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQ 240
           LILYKFTTTIEA+LNRQT+SDNFSVRQ+TITIRTI+NG+CYLATFVFGINAVGL LY+GQ
Sbjct: 181 LILYKFTTTIEASLNRQTISDNFSVRQITITIRTIINGLCYLATFVFGINAVGLVLYAGQ 240

Query: 241 LALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
           LA+NS+ME+ +ED +  T+G +Q  S NSTVE+  +  E +S+KDDQS
Sbjct: 241 LAINSIMEDINEDTQ--TQGKEQSGSLNSTVESPANSGE-NSNKDDQS 284

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g01740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g01740 vs. TrEMBL
Match NameE-valueIdentityDescription
V4UR94_9ROSI1.6e-7360.93Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009151mg PE=4 SV=1[more]
A0A067ETL5_CITSI1.6e-7360.93Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023825mg PE=4 SV=1[more]
W9R7B4_9ROSA4.1e-6961.03Uncharacterized protein OS=Morus notabilis GN=L484_012166 PE=4 SV=1[more]
B9SB97_RICCO4.1e-6959.64Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0649730 PE=4 SV=1[more]
B9I1E4_POPTR2.2e-6761.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10000g PE=4 SV=2[more]
BLAST of Cp4.1LG01g01740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15110.12.4e-6061.88 unknown protein[more]
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688583|ref|XP_011652784.1|2.5e-10479.93PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus][more]
gi|659112411|ref|XP_008456207.1|1.6e-10379.57PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis me... [more]
gi|567919520|ref|XP_006451766.1|2.3e-7360.93hypothetical protein CICLE_v10009151mg [Citrus clementina][more]
gi|658029128|ref|XP_008350007.1|1.3e-7161.32PREDICTED: uncharacterized protein LOC103413308 [Malus domestica][more]
gi|694317935|ref|XP_009340517.1|1.1e-7061.11PREDICTED: uncharacterized protein LOC103932610 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021434DUF3082
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g01740.1Cp4.1LG01g01740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021434Protein of unknown function DUF3082PFAMPF11282DUF3082coord: 149..226
score: 1.0
NoneNo IPR availablePANTHERPTHR35733FAMILY NOT NAMEDcoord: 1..273
score: 5.5E