CmoCh04G005900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G005900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr04 : 2942342 .. 2944764 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGATGGGTTGGGGGTAAATGATGAAATCTTTGGGAATCCAATCTCTCCATAGTTGCAGGCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCCTCAACCTTCTCTCCTCCTCCAATTTCCCCCTCTCTCTCTCTCTAACCCACAATTTCCTTCTCTCTCCTCCGCCCTTCTCCTCTCTCCACCGACCCATTACCTCCCCCCCCTCTGTTCCTCCCCTCCGAACTCACCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGACGCCGCCGCCTCTTTTCCCGATGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCTGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCTAAGCGGGTCAAAGAGCTGGTACCCTTTACTGCATTTCTTTTTTAAGTTTTGACTCTTTGGAATACACGTTTTGTGATTGTTTTAGTCTAGGAATGAATTGGGGTTCTGCTGCTTCCTTATTCCTTTGCCTTATTTTTTTGCACGCCATGTGTTTGAAGAAAGTCTTCATAGAAACTGCCTACGGTTTCTAAGTTGTTCACTATAGGCTTCAACTCGGCATCAAATTTTTTATGATGTAATTGGGGTCTTATGTATTCTTAGTCTCGTGCCGAGTAGAGTAGTTAGATGAACAAGCAAAATTCATTTGAAGTGGTGGCTGGCCATGGCTACCTAGATATAGGAGCTGTTTGATCATTCTGCATTGTCTTCCGGCCTCTTTTTTGGCCCTCAAGGAAGTCATATCAGTTACGAAGAAGCTGAAATATTGGATGGGGGACAATTGATTATGGTAGTTGTGAGATCCCATTTGAGTTGGAGAGGGAAACGAAACATTTTTTTATAAGGGCGTGGAAACCTCTCCCTAGCAAACGTGTTTCCAAACCGTGAGACTGACGGAAACACATAATGGGCCAAAGCGAACAATATATGCTAGTGGTGAGTTTGAGCTGTTACAAATGGTATTAGAGCTAGGCACTGAGCGGTGTGCTAGCGAGGACGCTGGCCCCCGAAGAGGTTCTTTGCATTGATTTCTTTTGTTACCATATAACAATTGAAAGTTCTATGACTTTATGTGCCCATTTTAGAAATTCAGGTCTGCTGGAGTTAAGAAGTCTCTAAAGGAGGAAGCAATGGAGAGCCTGAAAGCAATTAGTACAGGTCCAATTCAATCGAAGTCTAAACCTTCACCTGTACAAGCATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATACAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACAGTGTCCGATAACTTCTCGGTACGCTCTCGTGGTTACTTCATCCTTATATATGTTTTGATTATTTCATTGTCTTTCTCATCTGGACAGCTAATGGTAATATGATTTGAGCTAGAAATAGTTCAACAGGTGTTGCTTGTTTTTCACTAAGAGCTCTGTTGGATTAATATCTTGTAACTTGTATTAAAAAACAAGAAAATTTGAAACCTTTGTGGATTGATGTTCTGCTGGTTTTCTGTTCTTTTAGGTTCGACAACTGACGATAACAATAAGGTAACTTCCTCGCCTTGTTCTAACATATCTTGCAGTTAGATGAAACACTAGCGACCGATTCTTATCTCATATTTGCAGAACTATCGTGAACGGAATATGCTACCTTGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTCTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCAGAAGATAAAGAACTTGCAACTAAAGGTGATAAGCAAGTTAGCTCACCGAACTCAACTGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTCTAGTATCATCTTCTTCATTTTGGGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCCGACACAAAACTATGGATGAACAATGTATTTTATAAGTCTAGATTTATATAGCTCGAAATGCCTCCTGTTTAGGATTCGAACATGAACCTGGAAACTAGATTTAGCACCTGATGACCTCCCGACTTTCCTTTGCATCCCCCTGCTATATGGCCACGTTATCTACTTTAGTTAAAGTATTTTTAAGAGAGGACTATCTCCATAGGTCAACACGAGTTAATTCAGCAT

mRNA sequence

GATGGATGGGTTGGGGGTAAATGATGAAATCTTTGGGAATCCAATCTCTCCATAGTTGCAGGCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCCTCAACCTTCTCTCCTCCTCCAATTTCCCCCTCTCTCTCTCTCTAACCCACAATTTCCTTCTCTCTCCTCCGCCCTTCTCCTCTCTCCACCGACCCATTACCTCCCCCCCCTCTGTTCCTCCCCTCCGAACTCACCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGACGCCGCCGCCTCTTTTCCCGATGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCTGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCTAAGCGGGTCAAAGAGCTGAAATTCAGGTCTGCTGGAGTTAAGAAGTCTCTAAAGGAGGAAGCAATGGAGAGCCTGAAAGCAATTAGTACAGGTCCAATTCAATCGAAGTCTAAACCTTCACCTGTACAAGCATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATACAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACAGTGTCCGATAACTTCTCGGTTCGACAACTGACGATAACAATAAGAACTATCGTGAACGGAATATGCTACCTTGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTCTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCAGAAGATAAAGAACTTGCAACTAAAGGTGATAAGCAAGTTAGCTCACCGAACTCAACTGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTCTAGTATCATCTTCTTCATTTTGGGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCCGACACAAAACTATGGATGAACAATGTATTTTATAAGTCTAGATTTATATAGCTCGAAATGCCTCCTGTTTAGGATTCGAACATGAACCTGGAAACTAGATTTAGCACCTGATGACCTCCCGACTTTCCTTTGCATCCCCCTGCTATATGGCCACGTTATCTACTTTAGTTAAAGTATTTTTAAGAGAGGACTATCTCCATAGGTCAACACGAGTTAATTCAGCAT

Coding sequence (CDS)

ATGTTGCACACCCTCAACCTTCTCTCCTCCTCCAATTTCCCCCTCTCTCTCTCTCTAACCCACAATTTCCTTCTCTCTCCTCCGCCCTTCTCCTCTCTCCACCGACCCATTACCTCCCCCCCCTCTGTTCCTCCCCTCCGAACTCACCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGACGCCGCCGCCTCTTTTCCCGATGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCTGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCTAAGCGGGTCAAAGAGCTGAAATTCAGGTCTGCTGGAGTTAAGAAGTCTCTAAAGGAGGAAGCAATGGAGAGCCTGAAAGCAATTAGTACAGGTCCAATTCAATCGAAGTCTAAACCTTCACCTGTACAAGCATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATACAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACAGTGTCCGATAACTTCTCGGTTCGACAACTGACGATAACAATAAGAACTATCGTGAACGGAATATGCTACCTTGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTCTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCAGAAGATAAAGAACTTGCAACTAAAGGTGATAAGCAAGTTAGCTCACCGAACTCAACTGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGA

Homology

[Close]

BLAST of CmoCh04G005900 vs. TrEMBL
Match: A0A067ETL5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023825mg PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.8e-72
Identity = 172/279 (61.65%), Postives = 209/279 (74.91%), Query Frame = 1


Query: 1   MLHTLNLLSSSNFPLSLSLTHNFLLSPPPFSSLHRPITSPPSVPPLRTH-QCFCFPQFSE 60
           ML T +LLS  NFP ++S  H+    P   + L +P  S  + P  R   + +C  Q  E
Sbjct: 1   MLQTHHLLSL-NFPFTVS--HH----PQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE 60

Query: 61  -LSDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
             ++  A    ++GP+ELP +IFATTD+PSS+QVATSVLLTGAISVFLFR+LRRRAKR K
Sbjct: 61  PTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTT 180
           ELKFRS+G KKSLK+EA+++LKA+ +  I +K  PSPVQA LG + AGVIA+ILYKFTTT
Sbjct: 121 ELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNG+CYLATFVFGIN+VGLFLYSGQLALNS  E+
Sbjct: 181 IEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTED 240

Query: 241 GSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
            S  KE    G++Q  S NST E   D TE +S K+DQS
Sbjct: 241 SSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQS 271

[Close]

BLAST of CmoCh04G005900 vs. TrEMBL
Match: V4UR94_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009151mg PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.8e-72
Identity = 172/279 (61.65%), Postives = 209/279 (74.91%), Query Frame = 1


Query: 1   MLHTLNLLSSSNFPLSLSLTHNFLLSPPPFSSLHRPITSPPSVPPLRTH-QCFCFPQFSE 60
           ML T +LLS  NFP ++S  H+    P   + L +P  S  + P  R   + +C  Q  E
Sbjct: 1   MLQTHHLLSL-NFPFTVS--HH----PQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE 60

Query: 61  -LSDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
             ++  A    ++GP+ELP +IFATTD+PSS+QVATSVLLTGAISVFLFR+LRRRAKR K
Sbjct: 61  PTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTT 180
           ELKFRS+G KKSLK+EA+++LKA+ +  I +K  PSPVQA LG + AGVIA+ILYKFTTT
Sbjct: 121 ELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNG+CYLATFVFGIN+VGLFLYSGQLALNS  E+
Sbjct: 181 IEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTED 240

Query: 241 GSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
            S  KE    G++Q  S NST E   D TE +S K+DQS
Sbjct: 241 SSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQS 271

[Close]

BLAST of CmoCh04G005900 vs. TrEMBL
Match: W9R7B4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012166 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69
Identity = 170/276 (61.59%), Postives = 206/276 (74.64%), Query Frame = 1


Query: 10  SSNFPLSLSLTHNFLLSPPPFSSLHRP----ITSPPSVPPLRTHQCFCFPQFSELSDAAA 69
           +SNFP SLS  H+FL   P  +  HRP    + SP    P    Q    P  S     A 
Sbjct: 11  TSNFPFSLS-HHHFL--SPSLNFPHRPRLRTLYSPRPKQPWLAAQATSEPTTS----TAK 70

Query: 70  SFPDDDGPIEL--PST-IFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKF 129
              ++ GP+E   PST IFAT DDPS IQVATSVLLTGAISVFLFR+LRRRA+R KELKF
Sbjct: 71  PEEEEGGPVEFFTPSTPIFATDDDPSPIQVATSVLLTGAISVFLFRALRRRARRAKELKF 130

Query: 130 RSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIEAA 189
           RS+GVKKSLKEEA+++LKA+ +  I+SK  PSPVQA LGAI+AGVIA+ILYKFTTTIEAA
Sbjct: 131 RSSGVKKSLKEEALDNLKAMGSASIESKGPPSPVQALLGAISAGVIAVILYKFTTTIEAA 190

Query: 190 LNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSED 249
           LN+QT+SD++S RQ+TIT+RTIVNG+CYLATF+FGIN++GLFLY+GQLA+NS M EGS D
Sbjct: 191 LNQQTISDSYSARQITITVRTIVNGLCYLATFIFGINSIGLFLYAGQLAINSFM-EGSTD 250

Query: 250 KELATKGDKQVSSPNSTVETTL---DGTESSSSKDD 276
           +E  +KG +Q+SS NSTVE      D +E + S DD
Sbjct: 251 EETESKGGEQLSSTNSTVENPTSAGDSSEDNQSSDD 278

[Close]

BLAST of CmoCh04G005900 vs. TrEMBL
Match: B9I1E4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10000g PE=4 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 7.1e-69
Identity = 174/288 (60.42%), Postives = 209/288 (72.57%), Query Frame = 1


Query: 3   HTLNLLSSSNFPLSLSLTHN------FLLSPP---PFSSLHRPITSPPSVPPLRTHQCFC 62
           H  + LS   FPLS   T++      FL  PP   PF+    P + P   PPL       
Sbjct: 7   HNFHPLSPQIFPLSHHHTNHHLDPLKFLYKPPIFTPFNLSALPRSRPD--PPL------- 66

Query: 63  FPQFSELSDAAASFPDDDGPIEL---PSTIFATTDDPSSIQVATSVLLTGAISVFLFRSL 122
               ++L + A   P+++GPIE+     +IFAT+DDPSSIQVATSVLLTGAISVFLFRSL
Sbjct: 67  --WLAQLPEQAPE-PEEEGPIEILRSSPSIFATSDDPSSIQVATSVLLTGAISVFLFRSL 126

Query: 123 RRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIAL 182
           RRRAKR KELKFRS+G KK+LKEEA++SLK   + PI  K  PSPVQAFLGAI+AGVIAL
Sbjct: 127 RRRAKRSKELKFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPPSPVQAFLGAISAGVIAL 186

Query: 183 ILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQL 242
           ILYKF+TTIEA+LNRQTVSDNFSVRQ+TIT+RTIVNG+CYLATFVFGIN+VGLFLYS QL
Sbjct: 187 ILYKFSTTIEASLNRQTVSDNFSVRQITITVRTIVNGLCYLATFVFGINSVGLFLYSAQL 246

Query: 243 ALNSVMEEGSED-KELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
           A NS+ME G+++  E  T G  Q  S NST ++  DG E +SS+ DQ+
Sbjct: 247 AFNSLMEAGTDEVTESTTSG--QSGSSNSTSDSATDGAELTSSQGDQN 280

[Close]

BLAST of CmoCh04G005900 vs. TrEMBL
Match: B9SB97_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0649730 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.6e-68
Identity = 163/277 (58.84%), Postives = 200/277 (72.20%), Query Frame = 1


Query: 5   LNLLSSSNFPLSLSLTHNFLLSPPPFSSLHRPITSPPSVPPLRTHQCFCFPQFSELSDAA 64
           L+L SS + P SLS    F   PP    +       P  PP                   
Sbjct: 27  LSLTSSFSKPTSLS---TFSALPPSKPDIWLASEPTPVTPP------------------- 86

Query: 65  ASFPDDDGPIELP----STIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 124
           +  P++DGPIELP     +IFATTDDPS IQVATSVLLTG+I VFLFR+LRRRAKR KEL
Sbjct: 87  SPSPEEDGPIELPFPSSPSIFATTDDPSPIQVATSVLLTGSIGVFLFRALRRRAKRAKEL 146

Query: 125 KFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIE 184
           KFRS+G KK++KEEA++SLKA+ +  I ++  PSP+Q FLG ++A VIALILYKFTTTIE
Sbjct: 147 KFRSSGAKKTMKEEALDSLKAMGSASIDAQKPPSPLQTFLGGVSAAVIALILYKFTTTIE 206

Query: 185 AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGS 244
           AALNRQTVSDNFSVRQ+TIT+RTI+NG+CYLATFVFG+N+VGLFLYSGQLA+NS M EGS
Sbjct: 207 AALNRQTVSDNFSVRQITITVRTIINGLCYLATFVFGLNSVGLFLYSGQLAINSFM-EGS 266

Query: 245 EDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
             +E  +KG++Q  S NS  E+ +D TES+SS+ DQ+
Sbjct: 267 TSEESESKGNEQSGSLNSAPESPIDSTESNSSQGDQN 280

[Close]

BLAST of CmoCh04G005900 vs. TAIR10
Match: AT3G15110.1 (AT3G15110.1 unknown protein)

HSP 1 Score: 231.1 bits (588), Expect = 8.3e-61
Identity = 140/230 (60.87%), Postives = 171/230 (74.35%), Query Frame = 1


Query: 59  ELSDAAASFPDDDGPIELPST----------IFATTDDPSSIQVATSVLLTGAISVFLFR 118
           E++D A    ++DGPIELP++          IFAT+DDP+ +Q+ATSVLLTGAI+VFL R
Sbjct: 47  EIADVAEV--EEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIR 106

Query: 119 SLRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIQS-KSKPSPVQAFLGAIAAGV 178
           S+RRRAKR KEL FRS G KKSLKEEAM++LKA+S+ PI+   S PS  QAFLGAIAAGV
Sbjct: 107 SVRRRAKRAKELTFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGV 166

Query: 179 IALILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYS 238
           IALILYKFT T+E+ LNRQT+SDNFSVRQ+T+T+RTI+NGICYLATFVFG+NA GL LYS
Sbjct: 167 IALILYKFTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYS 226

Query: 239 GQLALNSVMEEGSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
           GQLA N   E+ +E+   AT      SS         D +E + S +DQS
Sbjct: 227 GQLAFN---EDSAEENMKATTQPGDSSSG--------DNSEVNKSNEDQS 263

[Close]

BLAST of CmoCh04G005900 vs. NCBI nr
Match: gi|778688583|ref|XP_011652784.1| (PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 2.0e-104
Identity = 224/282 (79.43%), Postives = 243/282 (86.17%), Query Frame = 1


Query: 1   MLHTLNLLSSSNFPLSL----SLTHNFLLSPPP-FSSLHRPITSPPSVPPLRTHQCFCFP 60
           M HT NLLSS NFPL      +  H   LSPP   SSLHRPIT   SV PL  H+CFC P
Sbjct: 570 MWHTQNLLSS-NFPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFH-SVSPLTNHRCFCLP 629

Query: 61  QFSELSDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 120
           QF++L+DA  +F DD+GP+ELP TIFATTDDPSS+QVATSVLLTGAISVFLFRSLRRRAK
Sbjct: 630 QFTDLADA--TFLDDNGPVELPPTIFATTDDPSSLQVATSVLLTGAISVFLFRSLRRRAK 689

Query: 121 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKF 180
           RVKELKFRS GVKKSLKEEAM+SLKAISTGPI+SKS PSP+QAFLGAIAAGVIALILYKF
Sbjct: 690 RVKELKFRSGGVKKSLKEEAMDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKF 749

Query: 181 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSV 240
           TTTIEA+LNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSV
Sbjct: 750 TTTIEASLNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSV 809

Query: 241 MEEGSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
           MEEGS+D E   K D+QVS P ST ETTLD TESS+SKDDQS
Sbjct: 810 MEEGSKDTEPKAKSDEQVSPPTSTAETTLDSTESSNSKDDQS 847

[Close]

BLAST of CmoCh04G005900 vs. NCBI nr
Match: gi|659112411|ref|XP_008456207.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 5.7e-104
Identity = 224/282 (79.43%), Postives = 244/282 (86.52%), Query Frame = 1


Query: 1   MLHTLNLLSSSNFPLSL----SLTHNFLLSPPP-FSSLHRPITSPPSVPPLRTHQCFCFP 60
           M HT NLLSS N PL      +  H   LSPP   SSLHRPIT   S+ PL TH+CFC P
Sbjct: 458 MWHTQNLLSS-NLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFH-SISPLTTHRCFCLP 517

Query: 61  QFSELSDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 120
           QF++L+DA  +F DD+GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAK
Sbjct: 518 QFTDLADA--TFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAK 577

Query: 121 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKF 180
           RVKELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSP+QAFLGAIAAGVIALILYKF
Sbjct: 578 RVKELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKF 637

Query: 181 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSV 240
           TTTIEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSV
Sbjct: 638 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSV 697

Query: 241 MEEGSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
           MEEGS+DKE   K D+QVS P ST ETTL+ TESS+SKDDQS
Sbjct: 698 MEEGSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQS 735

[Close]

BLAST of CmoCh04G005900 vs. NCBI nr
Match: gi|225461564|ref|XP_002282834.1| (PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera])

HSP 1 Score: 282.7 bits (722), Expect = 6.8e-73
Identity = 171/269 (63.57%), Postives = 211/269 (78.44%), Query Frame = 1


Query: 11  SNFPLSLSLTHNFLLSPPPFSSLHRPITSPPSVPPLRTHQCFCFPQFSELSDAAASFPDD 70
           S+F L LS +HN  LSPP F SL RP +       LRT      P  +++ D   + P++
Sbjct: 10  SSFSLPLSPSHNPCLSPP-FCSLSRPTSLHLVSAHLRTR---AEPLLAQVPDTTTTAPEE 69

Query: 71  DGPIELP---STIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGV 130
            GPIELP   S+IFAT DDP+ +QVATSVLLTGAISVFLFRS+RRR KR KEL+FRS+GV
Sbjct: 70  -GPIELPPSSSSIFATNDDPTPLQVATSVLLTGAISVFLFRSIRRRVKRAKELRFRSSGV 129

Query: 131 KKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIEAALNRQT 190
           KK+LKEEA++SLKA+ +G +++ + PSPVQA LG I AGVIALILYKFT TIEA+LNRQT
Sbjct: 130 KKTLKEEALDSLKAMGSGSVKA-APPSPVQALLGGITAGVIALILYKFTITIEASLNRQT 189

Query: 191 VSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKELAT 250
           VSDNFSVRQ+TITIRTI+NG+CYLATFVFGIN+VGLFLYSGQLALNS M EGS  +E   
Sbjct: 190 VSDNFSVRQITITIRTIINGLCYLATFVFGINSVGLFLYSGQLALNSFM-EGSTSEETQI 249

Query: 251 KGDKQVSSPNSTVETTLDGTESSSSKDDQ 277
           KG++Q+S+PN+  ++  DGT+ +SS+ DQ
Sbjct: 250 KGEEQLSTPNTLTDSPPDGTQLNSSEGDQ 271

[Close]

BLAST of CmoCh04G005900 vs. NCBI nr
Match: gi|658029128|ref|XP_008350007.1| (PREDICTED: uncharacterized protein LOC103413308 [Malus domestica])

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 177/287 (61.67%), Postives = 216/287 (75.26%), Query Frame = 1


Query: 1   MLHTLNLLSSSNFPLSLSLTHNFLLSPP-----PFSSLHRPITSPPSVPPLRTHQCFCFP 60
           ML T +LL S NFP+ LS      LSPP     P + LH+P +  P     R        
Sbjct: 1   MLQTQHLLLS-NFPIFLSHPQTNFLSPPNLSPFPLTFLHKPTSLCPVSAHSRAGPEQWLA 60

Query: 61  QFSELSDAAASFPDD---DGPIELP---STIFATTDDPSSIQVATSVLLTGAISVFLFRS 120
           +  E + A    P +   DGP ELP   S +FAT DDPSS+QVATSVLLTGAI+VFLFRS
Sbjct: 61  EAPEPTTATPYTPLEFAPDGPEELPPSSSPVFATNDDPSSLQVATSVLLTGAITVFLFRS 120

Query: 121 LRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIA 180
           LRRRAKR KELK+RS+GVKKSLK+EA++SLKA+STG +++K  PSPVQA LG I+AGVIA
Sbjct: 121 LRRRAKRAKELKYRSSGVKKSLKDEALDSLKALSTGSVEAKGPPSPVQALLGGISAGVIA 180

Query: 181 LILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQ 240
           LILYKFTTTIEA+LNRQT+SDNFSVRQ+TITIRTI+NG+CYLATFVFGINAVGL LY+GQ
Sbjct: 181 LILYKFTTTIEASLNRQTISDNFSVRQITITIRTIINGLCYLATFVFGINAVGLVLYAGQ 240

Query: 241 LALNSVMEEGSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQ 277
           LA+NS+ME+ +ED +  T+G++Q  S NSTVE+  +  E +S+KDDQ
Sbjct: 241 LAINSIMEDINEDTQ--TQGEEQSGSLNSTVESPTNSGE-NSNKDDQ 283

[Close]

BLAST of CmoCh04G005900 vs. NCBI nr
Match: gi|567919520|ref|XP_006451766.1| (hypothetical protein CICLE_v10009151mg [Citrus clementina])

HSP 1 Score: 280.8 bits (717), Expect = 2.6e-72
Identity = 172/279 (61.65%), Postives = 209/279 (74.91%), Query Frame = 1


Query: 1   MLHTLNLLSSSNFPLSLSLTHNFLLSPPPFSSLHRPITSPPSVPPLRTH-QCFCFPQFSE 60
           ML T +LLS  NFP ++S  H+    P   + L +P  S  + P  R   + +C  Q  E
Sbjct: 1   MLQTHHLLSL-NFPFTVS--HH----PQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE 60

Query: 61  -LSDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
             ++  A    ++GP+ELP +IFATTD+PSS+QVATSVLLTGAISVFLFR+LRRRAKR K
Sbjct: 61  PTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTT 180
           ELKFRS+G KKSLK+EA+++LKA+ +  I +K  PSPVQA LG + AGVIA+ILYKFTTT
Sbjct: 121 ELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNG+CYLATFVFGIN+VGLFLYSGQLALNS  E+
Sbjct: 181 IEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTED 240

Query: 241 GSEDKELATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 278
            S  KE    G++Q  S NST E   D TE +S K+DQS
Sbjct: 241 SSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQS 271

The following BLAST results are available for this feature:

BLAST of CmoCh04G005900 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G005900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067ETL5_CITSI	1.8e-72	61.65	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023825mg PE=4 SV=1	[more]
V4UR94_9ROSI	1.8e-72	61.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009151mg PE=4 SV=1	[more]
W9R7B4_9ROSA	3.2e-69	61.59	Uncharacterized protein OS=Morus notabilis GN=L484_012166 PE=4 SV=1	[more]
B9I1E4_POPTR	7.1e-69	60.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10000g PE=4 SV=2	[more]
B9SB97_RICCO	4.6e-68	58.84	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0649730 PE=4 SV=1	[more]

BLAST of CmoCh04G005900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15110.1	8.3e-61	60.87	unknown protein	[more]

BLAST of CmoCh04G005900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688583\|ref\|XP_011652784.1\|	2.0e-104	79.43	PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]	[more]
gi\|659112411\|ref\|XP_008456207.1\|	5.7e-104	79.43	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis me...	[more]
gi\|225461564\|ref\|XP_002282834.1\|	6.8e-73	63.57	PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera]	[more]
gi\|658029128\|ref\|XP_008350007.1\|	1.5e-72	61.67	PREDICTED: uncharacterized protein LOC103413308 [Malus domestica]	[more]
gi\|567919520\|ref\|XP_006451766.1\|	2.6e-72	61.65	hypothetical protein CICLE_v10009151mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021434	DUF3082

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G005900.1	CmoCh04G005900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021434	Protein of unknown function DUF3082	PFAM	PF11282	DUF3082	coord: 153..230 score: 6.8
None	No IPR available	PANTHER	PTHR35733	FAMILY NOT NAMED	coord: 1..277 score: 2.5E
None	No IPR available	PANTHER	PTHR35733:SF1	SUBFAMILY NOT NAMED	coord: 1..277 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G005900	Cucsa.032450	Cucumber (Gy14) v1	cgycmoB0012
CmoCh04G005900	CmaCh04G005560	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G005900	Cla004286	Watermelon (97103) v1	cmowmB699
CmoCh04G005900	Csa3G236050	Cucumber (Chinese Long) v2	cmocuB687
CmoCh04G005900	MELO3C019395	Melon (DHL92) v3.5.1	cmomeB683
CmoCh04G005900	ClCG05G009210	Watermelon (Charleston Gray)	cmowcgB660
CmoCh04G005900	CSPI03G19510	Wild cucumber (PI 183967)	cmocpiB698
CmoCh04G005900	Lsi05G001320	Bottle gourd (USVL1VR-Ls)	cmolsiB683
CmoCh04G005900	Cp4.1LG01g01740	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G005900	CsaV3_3G019570	Cucumber (Chinese Long) v3	cmocucB0814
CmoCh04G005900	Cla97C05G091530	Watermelon (97103) v2	cmowmbB735
CmoCh04G005900	Bhi01G001148	Wax gourd	cmowgoB0849
CmoCh04G005900	CsGy3G019430	Cucumber (Gy14) v2	cgybcmoB386
CmoCh04G005900	Carg13181	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G005900	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G005900	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G005900	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G005900	Melon (DHL92) v3.6.1	cmomedB774
CmoCh04G005900	Silver-seed gourd	carcmoB0899