Cp4.1LG01g01270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g01270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChitin synthase 1
LocationCp4.1LG01 : 3101308 .. 3102395 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCCTTCGCACTTGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGGTATAGAATTCATCGCACAAGTGTATTTGTTCATTAAGAATTTGGTTTTTGGCTAACTTTTCCCTCTTTTTTTGTAGACCAAAGACCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCTTGGTAGGTTTGGTTCATTTCTCTTGTTTTAACTGTTTGACCAGCCTTACAAAAGTCGTTCAAATCACCAATCAAGAGTCATAAATCTTCAATTTCAAGAACTCATCATCTAGTCTCATTCATGTTTATGTTCAATTTCTTGAGAATTTGCTAATAATTCATTCTTCTGATTCAGAATCTTCAAAGAAATTTGTAAGAATTTGCTAATAGTTGATTATTCATGAAACGAAATAATCAATTCAAATCGGAAATGAAATTCAAGAGGAGATTTGATGTTCTAGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGTTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAATAAAAAGAAAGAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATCGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCTTTCACTGGAAGAAGGGCCTCTTGGATCTCCAGCTAACAGCCTTATTTTTTATAATTGTA

mRNA sequence

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCCTTCGCACTTGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGACCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCTTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGTTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAATAAAAAGAAAGAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATCGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCTTTCACTGGAAGAAGGGCCTCTTGGATCTCCAGCTAACAGCCTTATTTTTTATAATTGTA

Coding sequence (CDS)

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCCTTCGCACTTGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGACCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCTTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGTTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAA

Protein sequence

MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
Homology
[Close]
BLAST of Cp4.1LG01g01270 vs. TrEMBL
Match: A0A0A0KYL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK   +QPP+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKK-RSEQPPKRPNLATFFLVVSWASFTVVILLLST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180

Query: 181 TSTLPK 187
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]
BLAST of Cp4.1LG01g01270 vs. TrEMBL
Match: A0A067L150_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06716 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.9e-36
Identity = 85/179 (47.49%), Postives = 121/179 (67.60%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEK  + + L  SI++S AL++ VSCI AE  + K +++RLD KLCYLPES+AF +G+AA
Sbjct: 1   MEKHLYGFLLIFSIIISLALLSFVSCILAEFKKAKKEEVRLDNKLCYLPESRAFGFGIAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LA LVIAQVIGN++ C +  L   G  S  ++P   +++ I  LV+SW SF V +++LSA
Sbjct: 61  LAFLVIAQVIGNMIICRNFWLRKEGITSKTKRP---NLITIAFLVLSWMSFGVAVIILSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESR 180
           ATSMSR+Q+YG GWL  +CY+VK GVY  + IL+L+   + + ++   L K      SR
Sbjct: 121 ATSMSRKQEYGKGWLDQDCYIVKDGVYFGSGILVLLCIAATLATSFLTLNKPQPQQPSR 176

[Close]
BLAST of Cp4.1LG01g01270 vs. TrEMBL
Match: A0A0K9RDW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082570 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-35
Identity = 88/176 (50.00%), Postives = 124/176 (70.45%), Query Frame = 1 

Query: 1   MEKRR-FVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVA 60
           MEK + F Y L+L  V+S A++A V CI AE  ++K +D+++DGKLC LPE++AF  G A
Sbjct: 1   MEKTQLFTYTLTLCTVLSLAVLAFVFCILAEFKKSKVEDVKVDGKLCELPENEAFWLGTA 60

Query: 61  ALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLS 120
           AL C  IAQ+IGN +F      +S+ ++S  Q   +R  +AIILL+ISW +F + I L+S
Sbjct: 61  ALICFTIAQIIGNSIFFVGYWSDSKERRSCCQF--KRPTVAIILLIISWINFGISITLIS 120

Query: 121 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQI 176
            ATSM+R+Q YG GWL+GECY+VK G+++ A+ILILV+    + SAVA LRK  Q+
Sbjct: 121 TATSMNRRQSYGKGWLNGECYIVKDGIFVGASILILVTLGCTLASAVATLRKRYQV 174

[Close]
BLAST of Cp4.1LG01g01270 vs. TrEMBL
Match: A0A067FY76_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-35
Identity = 89/182 (48.90%), Postives = 123/182 (67.58%), Query Frame = 1 

Query: 1   MEKR--RFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGV 60
           MEK+  R+ +   L I++S  LV+ +SC+ AE  + K KDL+LDGKLCYLPES A   G+
Sbjct: 1   MEKKHHRYGFVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGI 60

Query: 61  AALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLL 120
           AAL CL +AQVIGN+L C      +R K++N +    R  +A  LLV+SW SF V ++LL
Sbjct: 61  AALICLGVAQVIGNLLICRIFC--TRDKRNNCKTQKLR--IATALLVLSWISFGVAVILL 120

Query: 121 SAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDES 180
            AATSMSR+Q YG GWL  ECYLVK GV+  +  L+LVS+ SIV +A+   ++  Q+++ 
Sbjct: 121 GAATSMSRKQPYGKGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQRKTQVEQR 178

[Close]
BLAST of Cp4.1LG01g01270 vs. TrEMBL
Match: V4T3Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-35
Identity = 89/182 (48.90%), Postives = 123/182 (67.58%), Query Frame = 1 

Query: 1   MEKR--RFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGV 60
           MEK+  R+ +   L I++S  LV+ +SC+ AE  + K KDL+LDGKLCYLPES A   G+
Sbjct: 1   MEKKHHRYGFVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGI 60

Query: 61  AALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLL 120
           AAL CL +AQVIGN+L C      +R K++N +    R  +A  LLV+SW SF V ++LL
Sbjct: 61  AALICLGVAQVIGNLLICRIFC--TRDKRNNCKTQKLR--IATALLVLSWISFGVAVILL 120

Query: 121 SAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDES 180
            AATSMSR+Q YG GWL  ECYLVK GV+  +  L+LVS+ SIV +A+   ++  Q+++ 
Sbjct: 121 GAATSMSRKQPYGKGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQRKTQVEQR 178

[Close]
BLAST of Cp4.1LG01g01270 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218))

HSP 1 Score: 121.3 bits (303), Expect = 6.2e-28
Identity = 71/184 (38.59%), Postives = 105/184 (57.07%), Query Frame = 1 

Query: 10  LSLSIVVSFALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVA 69
           L    +  F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+A
Sbjct: 17  LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIA 76

Query: 70  ALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLS 129
           AL C+ +AQ++GNV+ C       RG    D+   R +I  IILL+ SW +F V + L+S
Sbjct: 77  ALVCVSVAQIVGNVVIC-------RGFTKTDKT--RTTIFCIILLLFSWVNFAVAVTLIS 136

Query: 130 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESR 184
              SM+R+Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   
Sbjct: 137 VGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHD 191

[Close]
BLAST of Cp4.1LG01g01270 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218))

HSP 1 Score: 111.3 bits (277), Expect = 6.4e-25
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 1 

Query: 13  SIVVSFALVAIVSCIAAELHRTKTKDLRLDGKL-CYLPESQAFRYGVAALACLVIAQVIG 72
           S+V S  LV+ ++C AAE  RT+ +D+R D +  CY+P S AF  G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYG 132
           N++   +    +   K  D        L  +LL++SW++F VV+L+LS A SMSR Q YG
Sbjct: 68  NIVVFRNHRTRT---KREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYG 127

Query: 133 AGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ 175
            GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQ 167

[Close]
BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: gi|778691219|ref|XP_011653242.1| (PREDICTED: uncharacterized protein LOC105435192 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 3.5e-65
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK   +QPP+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKK-RSEQPPKRPNLATFFLVVSWASFTVVILLLST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180

Query: 181 TSTLPK 187
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]
BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: gi|659101933|ref|XP_008451867.1| (PREDICTED: uncharacterized protein LOC103493027 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-63
Identity = 137/186 (73.66%), Postives = 155/186 (83.33%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK   +QPP+R  LA   LV+SWASFTVVILLL A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKK-RSEQPPKRPNLATFFLVVSWASFTVVILLLIA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTV-----RMNESRK 180

Query: 181 TSTLPK 187
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]
BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: gi|645265101|ref|XP_008237992.1| (PREDICTED: uncharacterized protein LOC103336680 [Prunus mume])

HSP 1 Score: 160.2 bits (404), Expect = 3.4e-36
Identity = 87/190 (45.79%), Postives = 122/190 (64.21%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEK ++   L L +V S  LV+I+SCIAAE+ +TK ++LR+ G+LC+LPESQAF +GVAA
Sbjct: 1   MEKHQYELVLILFVVASLGLVSIISCIAAEIKKTKEEELRMVGRLCHLPESQAFGFGVAA 60

Query: 61  LACLVIAQVIGNVLFCT-SCSLNSRGKKSND---QQPPRRSILAIILLVISWASFTVVIL 120
           L CL  AQ++GN++ CT  CS   + K  +D       +   + + L+ ISW SF + + 
Sbjct: 61  LICLFAAQMVGNLIVCTYFCSRERKKKGGSDFSISSKAKTPTIWMALVCISWTSFVMAVT 120

Query: 121 LLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQID 180
           LLSAATSMSR Q YG GWL G+CYLVK G+YI + IL+L++  S +   +    +  Q+D
Sbjct: 121 LLSAATSMSRDQPYGQGWLDGQCYLVKQGIYIGSGILVLIANGSTIGLIIITTMRKTQVD 180

Query: 181 ESRKTSTLPK 187
           E  K     K
Sbjct: 181 EGSKVKEQSK 190

[Close]
BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: gi|1009157750|ref|XP_015896921.1| (PREDICTED: uncharacterized protein LOC107430585 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 160.2 bits (404), Expect = 3.4e-36
Identity = 85/177 (48.02%), Postives = 118/177 (66.67%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEK R+ + L LS++ S  L++ VSCI AE  +TK KD++L G+LCYLPES A  +G+AA
Sbjct: 1   MEKNRYGFLLILSVIASLGLMSCVSCIVAEFKKTKVKDVKLVGRLCYLPESHALGFGIAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           L CL +AQ+IGNV+ C +     RG        P   +++  LL+ISW  F + + L+S 
Sbjct: 61  LICLSVAQIIGNVIICGNFCSKQRGISYCKANKP---LISTFLLLISWIGFGIAVALIST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDE 178
           ATSMS +Q YG GWL GECYLVK GVYI +A L+L +  SI+ S +  +RK+ Q+D+
Sbjct: 121 ATSMSLKQAYGTGWLDGECYLVKDGVYIGSAFLVLFTVVSILGSTLTTIRKT-QVDQ 173

[Close]
BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: gi|802599901|ref|XP_012072656.1| (PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas])

HSP 1 Score: 158.7 bits (400), Expect = 9.9e-36
Identity = 85/179 (47.49%), Postives = 121/179 (67.60%), Query Frame = 1 

Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEK  + + L  SI++S AL++ VSCI AE  + K +++RLD KLCYLPES+AF +G+AA
Sbjct: 1   MEKHLYGFLLIFSIIISLALLSFVSCILAEFKKAKKEEVRLDNKLCYLPESRAFGFGIAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LA LVIAQVIGN++ C +  L   G  S  ++P   +++ I  LV+SW SF V +++LSA
Sbjct: 61  LAFLVIAQVIGNMIICRNFWLRKEGITSKTKRP---NLITIAFLVLSWMSFGVAVIILSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESR 180
           ATSMSR+Q+YG GWL  +CY+VK GVY  + IL+L+   + + ++   L K      SR
Sbjct: 121 ATSMSRKQEYGKGWLDQDCYIVKDGVYFGSGILVLLCIAATLATSFLTLNKPQPQQPSR 176

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g01270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g01270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYL9_CUCSA2.4e-6575.27Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1[more]
A0A067L150_JATCU6.9e-3647.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06716 PE=4 SV=1[more]
A0A0K9RDW3_SPIOL2.0e-3550.00Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082570 PE=4 SV=1[more]
A0A067FY76_CITSI4.5e-3548.90Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1[more]
V4T3Z0_9ROSI4.5e-3548.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g01270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31720.16.2e-2838.59 Protein of unknown function (DUF1218)[more]
AT4G19370.16.4e-2539.88 Protein of unknown function (DUF1218)[more]
BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691219|ref|XP_011653242.1|3.5e-6575.27PREDICTED: uncharacterized protein LOC105435192 [Cucumis sativus][more]
gi|659101933|ref|XP_008451867.1|2.5e-6373.66PREDICTED: uncharacterized protein LOC103493027 [Cucumis melo][more]
gi|645265101|ref|XP_008237992.1|3.4e-3645.79PREDICTED: uncharacterized protein LOC103336680 [Prunus mume][more]
gi|1009157750|ref|XP_015896921.1|3.4e-3648.02PREDICTED: uncharacterized protein LOC107430585 isoform X1 [Ziziphus jujuba][more]
gi|802599901|ref|XP_012072656.1|9.9e-3647.49PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g01270.1Cp4.1LG01g01270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 60..158
score: 2.4
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 1..183
score: 7.0
NoneNo IPR availablePANTHERPTHR31769:SF6SUBFAMILY NOT NAMEDcoord: 1..183
score: 7.0
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g01270CmaCh04G005990Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g01270CmoCh04G006410Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g01270Cla005459Watermelon (97103) v1cpewmB419
Cp4.1LG01g01270Csa4G056580Cucumber (Chinese Long) v2cpecuB399
Cp4.1LG01g01270MELO3C016217Melon (DHL92) v3.5.1cpemeB417
Cp4.1LG01g01270ClCG07G011130Watermelon (Charleston Gray)cpewcgB411
Cp4.1LG01g01270CSPI04G06910Wild cucumber (PI 183967)cpecpiB396
Cp4.1LG01g01270MELO3C016217.2Melon (DHL92) v3.6.1cpemedB488
Cp4.1LG01g01270CsaV3_4G007120Cucumber (Chinese Long) v3cpecucB0496
Cp4.1LG01g01270Bhi01G002355Wax gourdcpewgoB0509
Cp4.1LG01g01270CsGy4G006840Cucumber (Gy14) v2cgybcpeB501
Cp4.1LG01g01270Carg13147Silver-seed gourdcarcpeB0061
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g01270Cucurbita pepo (Zucchini)cpecpeB236
Cp4.1LG01g01270Cucurbita maxima (Rimu)cmacpeB353
Cp4.1LG01g01270Cucurbita moschata (Rifu)cmocpeB315
Cp4.1LG01g01270Bottle gourd (USVL1VR-Ls)cpelsiB372
Cp4.1LG01g01270Melon (DHL92) v3.5.1cpemeB426
Cp4.1LG01g01270Silver-seed gourdcarcpeB0929