CmaCh04G005990 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G005990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_25
Location	Cma_Chr04 : 3024846 .. 3026090 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATCCTACACACACACACACACACAAAATAGAAAAGCCCCCTAAGAGCTCCCAATTTCCTCTTTAGTCACATTGAAGCTAGCCTTTCCCTGTGTTTTATATTCATTCTCCTCATAACACCACACCCCGCCATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCGTTCGCACTCGTTGCCATTGTGTCTTGTATAGCTGCAGAATTACACAGAACAAAGGTATAGAATTCATCGCACAAGTGTGTGTGTGTTCAATAAGAATTTGATTTTTGGCTAACTTTTCCCTCTTTTTTTGTAGACCAAAGACCTCAGATTGGATGGAAAGCTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTCGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAATTGCAGTTTGAACTCAAGAGGGAAGAAAAACAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCCTGGTAGGTTTGGTTCATATCTCTTGTTTTCACTGTTTGATCAGCCTTACAAAAGTCATTCAAATCACCAATCAAGAGTCATAAATCTTCAATTTCAAGAACTCATCATCTAGTCTCATTCATGTTTATGTTCAATTTCTTGAAAATTTGCTAATAATTCATTCTTCTGATTCAGAATCTTCAAAGAAATTTATAAGAATTTGCTAATAGTTGATTATTCATGAAACGAAAAAATCAATTCAAATCGAAAATGTAATTCAGAGGAGATTTGATGTTCTAGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCAACAGGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAAAAATAAAAAAGAAATAAAAGCGTCGCAACGGGAACGGTGACGGCGGCGATTGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCCTTCACTGGAACGGCCTCTTGGATCTCCAGCTAACAGCCTTATTTTTTATAATTGTAAATTGGGGGAAAATACACACGAA

mRNA sequence

GCAATCCTACACACACACACACACACAAAATAGAAAAGCCCCCTAAGAGCTCCCAATTTCCTCTTTAGTCACATTGAAGCTAGCCTTTCCCTGTGTTTTATATTCATTCTCCTCATAACACCACACCCCGCCATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCGTTCGCACTCGTTGCCATTGTGTCTTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGACCTCAGATTGGATGGAAAGCTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTCGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAATTGCAGTTTGAACTCAAGAGGGAAGAAAAACAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCCTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCAACAGGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAAAAATAAAAAAGAAATAAAAGCGTCGCAACGGGAACGGTGACGGCGGCGATTGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCCTTCACTGGAACGGCCTCTTGGATCTCCAGCTAACAGCCTTATTTTTTATAATTGTAAATTGGGGGAAAATACACACGAA

Coding sequence (CDS)

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCGTTCGCACTCGTTGCCATTGTGTCTTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGACCTCAGATTGGATGGAAAGCTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTCGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAATTGCAGTTTGAACTCAAGAGGGAAGAAAAACAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCCTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCAACAGGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAA

Protein sequence

MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRKTSTLPK

Homology

[Close]

BLAST of CmaCh04G005990 vs. TrEMBL
Match: A0A0A0KYL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63
Identity = 137/186 (73.66%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LAC V+AQVIGN+L CT+CS+NSR KK + +QPP+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRS-EQPPKRPNLATFFLVVSWASFTVVILLLST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S  S V SAV V     +I+ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180

Query: 181 TSTLPK 187
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]

BLAST of CmaCh04G005990 vs. TrEMBL
Match: A0A0K9RDW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082570 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-37
Identity = 89/176 (50.57%), Postives = 126/176 (71.59%), Query Frame = 1


Query: 1   MEKRR-FVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVA 60
           MEK + F Y L+L  V+S A++A V CI AE  ++K +D+++DGKLC LPE++AF  G A
Sbjct: 1   MEKTQLFTYTLTLCTVLSLAVLAFVFCILAEFKKSKVEDVKVDGKLCELPENEAFWLGTA 60

Query: 61  ALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLS 120
           AL CF IAQ+IGN +F      +S+ +++  Q   +R  +AIILL+ISW +F + I L+S
Sbjct: 61  ALICFTIAQIIGNSIFFVGYWSDSKERRSCCQF--KRPTVAIILLIISWINFGISITLIS 120

Query: 121 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQI 176
            ATSM+R+Q YG GWL+GECY+VK G+++ A+ILILV+ G  + SAVA LRK  Q+
Sbjct: 121 TATSMNRRQSYGKGWLNGECYIVKDGIFVGASILILVTLGCTLASAVATLRKRYQV 174

[Close]

BLAST of CmaCh04G005990 vs. TrEMBL
Match: V4T3Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 90/182 (49.45%), Postives = 123/182 (67.58%), Query Frame = 1


Query: 1   MEKR--RFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGV 60
           MEK+  R+ +   L I++S  LV+ +SC+ AE  + K KDL+LDGKLCYLPES A   G+
Sbjct: 1   MEKKHHRYGFVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGI 60

Query: 61  AALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLL 120
           AAL C  +AQVIGN+L C      +R K+NN +    R  +A  LLV+SW SF V ++LL
Sbjct: 61  AALICLGVAQVIGNLLICR--IFCTRDKRNNCKTQKLR--IATALLVLSWISFGVAVILL 120

Query: 121 SAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDES 180
            AATSMSR+Q YG GWL  ECYLVK GV+  +  L+LVS+GSIV +A+   ++  Q+++ 
Sbjct: 121 GAATSMSRKQPYGKGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQRKTQVEQR 178

[Close]

BLAST of CmaCh04G005990 vs. TrEMBL
Match: A0A067FY76_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 90/182 (49.45%), Postives = 123/182 (67.58%), Query Frame = 1


Query: 1   MEKR--RFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGV 60
           MEK+  R+ +   L I++S  LV+ +SC+ AE  + K KDL+LDGKLCYLPES A   G+
Sbjct: 1   MEKKHHRYGFVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGI 60

Query: 61  AALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLL 120
           AAL C  +AQVIGN+L C      +R K+NN +    R  +A  LLV+SW SF V ++LL
Sbjct: 61  AALICLGVAQVIGNLLICR--IFCTRDKRNNCKTQKLR--IATALLVLSWISFGVAVILL 120

Query: 121 SAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDES 180
            AATSMSR+Q YG GWL  ECYLVK GV+  +  L+LVS+GSIV +A+   ++  Q+++ 
Sbjct: 121 GAATSMSRKQPYGKGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQRKTQVEQR 178

[Close]

BLAST of CmaCh04G005990 vs. TrEMBL
Match: A0A067L150_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06716 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-36
Identity = 84/179 (46.93%), Postives = 120/179 (67.04%), Query Frame = 1


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEK  + + L  SI++S AL++ VSCI AE  + K +++RLD KLCYLPES+AF +G+AA
Sbjct: 1   MEKHLYGFLLIFSIIISLALLSFVSCILAEFKKAKKEEVRLDNKLCYLPESRAFGFGIAA 60

Query: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LA  VIAQVIGN++ C N  L   G  +  ++P   +++ I  LV+SW SF V +++LSA
Sbjct: 61  LAFLVIAQVIGNMIICRNFWLRKEGITSKTKRP---NLITIAFLVLSWMSFGVAVIILSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESR 180
           ATSMSR+Q+YG GWL  +CY+VK GVY  + IL+L+   + + ++   L K      SR
Sbjct: 121 ATSMSRKQEYGKGWLDQDCYIVKDGVYFGSGILVLLCIAATLATSFLTLNKPQPQQPSR 176

[Close]

BLAST of CmaCh04G005990 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218))

HSP 1 Score: 122.1 bits (305), Expect = 3.6e-28
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 1


Query: 10  LSLSIVVSFALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVA 69
           L    +  F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+A
Sbjct: 17  LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIA 76

Query: 70  ALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLS 129
           AL C  +AQ++GNV+ C       RG    D+   R +I  IILL+ SW +F V + L+S
Sbjct: 77  ALVCVSVAQIVGNVVIC-------RGFTKTDKT--RTTIFCIILLLFSWVNFAVAVTLIS 136

Query: 130 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESR 184
              SM+R+Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   
Sbjct: 137 VGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHD 191

[Close]

BLAST of CmaCh04G005990 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218))

HSP 1 Score: 121.3 bits (303), Expect = 6.2e-28
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 1


Query: 13  SIVVSFALVAIVSCIAAELHRTKTKDLRLDGKL-CYLPESQAFRYGVAALACFVIAQVIG 72
           S+V S  LV+ ++C AAE  RT+ +D+R D +  CY+P S AF  G AA+ CF +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYG 132
           N++   N    +   K  D        L  +LL++SW++F VV+L+LS A SMSR Q YG
Sbjct: 68  NIVVFRNHRTRT---KREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYG 127

Query: 133 AGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQ 175
            GWL  +CYLVK GV+ A+  L ++  G++  SA  +  K  Q
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQ 167

[Close]

BLAST of CmaCh04G005990 vs. NCBI nr
Match: gi|778691219|ref|XP_011653242.1| (PREDICTED: uncharacterized protein LOC105435192 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63
Identity = 137/186 (73.66%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LAC V+AQVIGN+L CT+CS+NSR KK + +QPP+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRS-EQPPKRPNLATFFLVVSWASFTVVILLLST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S  S V SAV V     +I+ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180

Query: 181 TSTLPK 187
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]

BLAST of CmaCh04G005990 vs. NCBI nr
Match: gi|659101933|ref|XP_008451867.1| (PREDICTED: uncharacterized protein LOC103493027 [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 134/186 (72.04%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LAC V+AQVIGN+L CT+CS+NSR KK + +QPP+R  LA   LV+SWASFTVVILLL A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRS-EQPPKRPNLATFFLVVSWASFTVVILLLIA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S  + V SAV V     +++ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTV-----RMNESRK 180

Query: 181 TSTLPK 187
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]

BLAST of CmaCh04G005990 vs. NCBI nr
Match: gi|645265101|ref|XP_008237992.1| (PREDICTED: uncharacterized protein LOC103336680 [Prunus mume])

HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37
Identity = 87/190 (45.79%), Postives = 122/190 (64.21%), Query Frame = 1


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEK ++   L L +V S  LV+I+SCIAAE+ +TK ++LR+ G+LC+LPESQAF +GVAA
Sbjct: 1   MEKHQYELVLILFVVASLGLVSIISCIAAEIKKTKEEELRMVGRLCHLPESQAFGFGVAA 60

Query: 61  LACFVIAQVIGNVLFCTN-CSLNSRGKKNND---QQPPRRSILAIILLVISWASFTVVIL 120
           L C   AQ++GN++ CT  CS   + K  +D       +   + + L+ ISW SF + + 
Sbjct: 61  LICLFAAQMVGNLIVCTYFCSRERKKKGGSDFSISSKAKTPTIWMALVCISWTSFVMAVT 120

Query: 121 LLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQID 180
           LLSAATSMSR Q YG GWL G+CYLVK G+YI + IL+L++ GS +   +    +  Q+D
Sbjct: 121 LLSAATSMSRDQPYGQGWLDGQCYLVKQGIYIGSGILVLIANGSTIGLIIITTMRKTQVD 180

Query: 181 ESRKTSTLPK 187
           E  K     K
Sbjct: 181 EGSKVKEQSK 190

[Close]

BLAST of CmaCh04G005990 vs. NCBI nr
Match: gi|902213083|gb|KNA17174.1| (hypothetical protein SOVF_082570 [Spinacia oleracea])

HSP 1 Score: 163.3 bits (412), Expect = 4.0e-37
Identity = 89/176 (50.57%), Postives = 126/176 (71.59%), Query Frame = 1


Query: 1   MEKRR-FVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVA 60
           MEK + F Y L+L  V+S A++A V CI AE  ++K +D+++DGKLC LPE++AF  G A
Sbjct: 1   MEKTQLFTYTLTLCTVLSLAVLAFVFCILAEFKKSKVEDVKVDGKLCELPENEAFWLGTA 60

Query: 61  ALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLS 120
           AL CF IAQ+IGN +F      +S+ +++  Q   +R  +AIILL+ISW +F + I L+S
Sbjct: 61  ALICFTIAQIIGNSIFFVGYWSDSKERRSCCQF--KRPTVAIILLIISWINFGISITLIS 120

Query: 121 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQI 176
            ATSM+R+Q YG GWL+GECY+VK G+++ A+ILILV+ G  + SAVA LRK  Q+
Sbjct: 121 TATSMNRRQSYGKGWLNGECYIVKDGIFVGASILILVTLGCTLASAVATLRKRYQV 174

[Close]

BLAST of CmaCh04G005990 vs. NCBI nr
Match: gi|568857832|ref|XP_006482468.1| (PREDICTED: uncharacterized protein LOC102625276 [Citrus sinensis])

HSP 1 Score: 163.3 bits (412), Expect = 4.0e-37
Identity = 91/182 (50.00%), Postives = 123/182 (67.58%), Query Frame = 1


Query: 1   MEKR--RFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGV 60
           MEK+  R+ +   L I++S  LV+ +SC+ AE  + K KDL+LDGKLCYLPES A   G+
Sbjct: 1   MEKKHHRYGFVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGI 60

Query: 61  AALACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLL 120
           AAL C  +AQVIGN+L C      +R K+NN +    R  +A  LLV+SW SF V ++LL
Sbjct: 61  AALICLGVAQVIGNLLICR--IFCTRDKRNNCKTQKLR--IATALLVLSWISFGVAVILL 120

Query: 121 SAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDES 180
            AATSMSR+Q YG GWL  ECYLVK GV++ +  L+LVS+GSIV +A+   +   Q+++ 
Sbjct: 121 GAATSMSRKQPYGKGWLDRECYLVKDGVFVGSGGLVLVSSGSIVAAAIVSSQIKTQVEQR 178

The following BLAST results are available for this feature:

BLAST of CmaCh04G005990 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G005990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYL9_CUCSA	1.0e-63	73.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056580 PE=4 SV=1	[more]
A0A0K9RDW3_SPIOL	2.8e-37	50.57	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082570 PE=4 SV=1	[more]
V4T3Z0_9ROSI	1.1e-36	49.45	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1	[more]
A0A067FY76_CITSI	1.1e-36	49.45	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1	[more]
A0A067L150_JATCU	3.1e-36	46.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06716 PE=4 SV=1	[more]

BLAST of CmaCh04G005990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31720.1	3.6e-28	38.59	Protein of unknown function (DUF1218)	[more]
AT4G19370.1	6.2e-28	41.72	Protein of unknown function (DUF1218)	[more]

BLAST of CmaCh04G005990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691219\|ref\|XP_011653242.1\|	1.5e-63	73.66	PREDICTED: uncharacterized protein LOC105435192 [Cucumis sativus]	[more]
gi\|659101933\|ref\|XP_008451867.1\|	1.1e-61	72.04	PREDICTED: uncharacterized protein LOC103493027 [Cucumis melo]	[more]
gi\|645265101\|ref\|XP_008237992.1\|	3.1e-37	45.79	PREDICTED: uncharacterized protein LOC103336680 [Prunus mume]	[more]
gi\|902213083\|gb\|KNA17174.1\|	4.0e-37	50.57	hypothetical protein SOVF_082570 [Spinacia oleracea]	[more]
gi\|568857832\|ref\|XP_006482468.1\|	4.0e-37	50.00	PREDICTED: uncharacterized protein LOC102625276 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G005990.1	CmaCh04G005990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 60..158 score: 5.0
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 1..183 score: 3.2
None	No IPR available	PANTHER	PTHR31769:SF6	SUBFAMILY NOT NAMED	coord: 1..183 score: 3.2
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G005990	Cla005459	Watermelon (97103) v1	cmawmB692
CmaCh04G005990	Csa4G056580	Cucumber (Chinese Long) v2	cmacuB708
CmaCh04G005990	MELO3C016217	Melon (DHL92) v3.5.1	cmameB695
CmaCh04G005990	ClCG07G011130	Watermelon (Charleston Gray)	cmawcgB675
CmaCh04G005990	CSPI04G06910	Wild cucumber (PI 183967)	cmacpiB714
CmaCh04G005990	CmoCh04G006410	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G005990	Cp4.1LG01g01270	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G005990	MELO3C016217.2	Melon (DHL92) v3.6.1	cmamedB783
CmaCh04G005990	CsaV3_4G007120	Cucumber (Chinese Long) v3	cmacucB0841
CmaCh04G005990	Cla97C07G137860	Watermelon (97103) v2	cmawmbB782
CmaCh04G005990	Bhi01G002355	Wax gourd	cmawgoB0847
CmaCh04G005990	CsGy4G006840	Cucumber (Gy14) v2	cgybcmaB541
CmaCh04G005990	Carg13147	Silver-seed gourd	carcmaB0055

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G005990	Silver-seed gourd	carcmaB0927
CmaCh04G005990	Cucurbita maxima (Rimu)	cmacmaB353
CmaCh04G005990	Cucurbita moschata (Rifu)	cmacmoB703
CmaCh04G005990	Cucurbita pepo (Zucchini)	cmacpeB717
CmaCh04G005990	Bottle gourd (USVL1VR-Ls)	cmalsiB695