CmoCh19G009840 (gene) Cucurbita moschata (Rifu)

NameCmoCh19G009840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMYB transcription factor
LocationCmo_Chr19 : 8833962 .. 8835258 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTGGGTCCCTCTCTGTCGTCTCGAGCCAGCAGTAATTTCTACAATTTTTTAGTCAGAGATATATAAATTGTTGGTGGACTCTGAGTCTTCTTCTTCATCAGACCAAACTTCCAGTTCACAGCCATGGTTCGAGCCCCGTATTTTGATGAAAATGGACTCAAAAAAGGTGCATGGAGTCCTGATGAAGATGAGAAGCTCAAAGCTTACGTTCATAAACATGGCCATTGCAATTGGCGAGAGCTCCCTAGATTTGCAGGTAATTTCAACCCTAAATTTCCCCTTTCTTCTTTCTTTCAACCTTATTATGTAAAAACACAAATAACCCATTTCAAAAAATGCCTTCTTTTAGTGAATTTTAGTGAATACAATTACAAATACAAATAACCCATCACTCATTTTACTGAATTTTACCTTGAAGAACATGAATAATTGAGAGATGGGTCCGATTATATGAATGATTTTGAATTGAAATAATGAGGTGGGGTTATGATTTTCATTATTAGGTTTGTCGAGGTGTGGCAAAAGTTGCCGATTACGTTGGATCAATTACCTTTGTCCAGACGTGAAGAGAGGAAACTACTCGAAAGAAGAAGAACGATTAATCCTTCAATTGCATCAAGAACATGGAAACAAGTATGTCTCGATCCTTTCTAAGTATTCATCAAATATGTATTCGAAAGGTTAAATATTGATATCACATGTTGATTCTATTCATTAGATGGTCACTGATGGCTACAAAATTACCGGGACGAACGGATAACGAAATCAAGAATTATTGGCATACCCATTTGAAGAAGGTAAAAGCTAGCAAGGTTAAAAAGAAGCAACAAAACGAGGCAATTTCCATGAAAGAAAGAGAGACAGAAATGAAAGCCAATTTGATAAGCGAAGTTCCCTCTCATGAAATCTTGGAAAGCTCTCCATTTTCGCCGTTGTCCTCTGAAATCTCCACTGTCTGTTCCAACCAAGAATCGACACAAGACAGCCCTCCAACGACATTCAAGTTCCAAGAAACAAGTAATAACAACAATGGAGATTTCTGGGATGTTCCATTTTTAGTAGACAATTTGGAAGCTCAAAGTCAAGACCCAATGTTCTTCCATATTAACTACGATTTCGAGTTTGATCAAGCTGACTTGTTCTATCAAGTAATGAAGGAATTGCCCGAGAATTATCAACCCTATTTGTATCCCTCCTGAAAAAACGTCGTGTATCTGTATCTATATCCAAATCTATCTCTATACAGTAATAATGATAGAATTTCACTATATCTATCTATGCCCAAATTTCTTAA

mRNA sequence

CTTCTGGGTCCCTCTCTGTCGTCTCGAGCCAGCAGTAATTTCTACAATTTTTTAGTCAGAGATATATAAATTGTTGGTGGACTCTGAGTCTTCTTCTTCATCAGACCAAACTTCCAGTTCACAGCCATGGTTCGAGCCCCGTATTTTGATGAAAATGGACTCAAAAAAGGTGCATGGAGTCCTGATGAAGATGAGAAGCTCAAAGCTTACGTTCATAAACATGGCCATTGCAATTGGCGAGAGCTCCCTAGATTTGCAGGTTTGTCGAGGTGTGGCAAAAGTTGCCGATTACGTTGGATCAATTACCTTTGTCCAGACGTGAAGAGAGGAAACTACTCGAAAGAAGAAGAACGATTAATCCTTCAATTGCATCAAGAACATGGAAACAAATGGTCACTGATGGCTACAAAATTACCGGGACGAACGGATAACGAAATCAAGAATTATTGGCATACCCATTTGAAGAAGGTAAAAGCTAGCAAGGTTAAAAAGAAGCAACAAAACGAGGCAATTTCCATGAAAGAAAGAGAGACAGAAATGAAAGCCAATTTGATAAGCGAAGTTCCCTCTCATGAAATCTTGGAAAGCTCTCCATTTTCGCCGTTGTCCTCTGAAATCTCCACTGTCTGTTCCAACCAAGAATCGACACAAGACAGCCCTCCAACGACATTCAAGTTCCAAGAAACAAGTAATAACAACAATGGAGATTTCTGGGATGTTCCATTTTTAGTAGACAATTTGGAAGCTCAAAGTCAAGACCCAATGTTCTTCCATATTAACTACGATTTCGAGTTTGATCAAGCTGACTTGTTCTATCAAGTAATGAAGGAATTGCCCGAGAATTATCAACCCTATTTGTATCCCTCCTGAAAAAACGTCGTGTATCTGTATCTATATCCAAATCTATCTCTATACAGTAATAATGATAGAATTTCACTATATCTATCTATGCCCAAATTTCTTAA

Coding sequence (CDS)

ATGGTTCGAGCCCCGTATTTTGATGAAAATGGACTCAAAAAAGGTGCATGGAGTCCTGATGAAGATGAGAAGCTCAAAGCTTACGTTCATAAACATGGCCATTGCAATTGGCGAGAGCTCCCTAGATTTGCAGGTTTGTCGAGGTGTGGCAAAAGTTGCCGATTACGTTGGATCAATTACCTTTGTCCAGACGTGAAGAGAGGAAACTACTCGAAAGAAGAAGAACGATTAATCCTTCAATTGCATCAAGAACATGGAAACAAATGGTCACTGATGGCTACAAAATTACCGGGACGAACGGATAACGAAATCAAGAATTATTGGCATACCCATTTGAAGAAGGTAAAAGCTAGCAAGGTTAAAAAGAAGCAACAAAACGAGGCAATTTCCATGAAAGAAAGAGAGACAGAAATGAAAGCCAATTTGATAAGCGAAGTTCCCTCTCATGAAATCTTGGAAAGCTCTCCATTTTCGCCGTTGTCCTCTGAAATCTCCACTGTCTGTTCCAACCAAGAATCGACACAAGACAGCCCTCCAACGACATTCAAGTTCCAAGAAACAAGTAATAACAACAATGGAGATTTCTGGGATGTTCCATTTTTAGTAGACAATTTGGAAGCTCAAAGTCAAGACCCAATGTTCTTCCATATTAACTACGATTTCGAGTTTGATCAAGCTGACTTGTTCTATCAAGTAATGAAGGAATTGCCCGAGAATTATCAACCCTATTTGTATCCCTCCTGA
BLAST of CmoCh19G009840 vs. Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-42
Identity = 91/206 (44.17%), Postives = 122/206 (59.22%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           M RAP  ++ GLKKG W+P+ED+ L A++ +HGH NWR LP+ AGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKK------ 120
           L PD+KRGN+SKEEE  I+ LH+  GN+WS +A +LPGRTDNEIKN WHTHLKK      
Sbjct: 61  LRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPA 120

Query: 121 -------------VKASKVKKKQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLS 180
                         K    KK     A      E    +++     +  + E    + +S
Sbjct: 121 QGGHVAASGGKKHKKPKSAKKPAAAAAAPPASPERSASSSVTESSMASSVAEEHGNAGIS 180

Query: 181 SEISTVCSNQESTQDSPPTTFKFQET 188
           S  ++VC+ +ES+  S    F+  ++
Sbjct: 181 SASASVCAKEESSFTSASEEFQIDDS 206

BLAST of CmoCh19G009840 vs. Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.7e-41
Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = 1

Query: 3   RAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINYLC 62
           RAP   + GL +G+W+P ED +L AY+ KHGH NWR LP+ AGL RCGKSCRLRWINYL 
Sbjct: 5   RAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLR 64

Query: 63  PDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASKVKK 122
           PD+KRGN++ EEE  I++LH   GNKWS +A  LPGRTDNEIKN W+THLKK  A + KK
Sbjct: 65  PDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKK 124

Query: 123 K 124
           K
Sbjct: 125 K 125

BLAST of CmoCh19G009840 vs. Swiss-Prot
Match: MYB51_ARATH (Transcription factor MYB51 OS=Arabidopsis thaliana GN=MYB51 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 6.1e-41
Identity = 75/115 (65.22%), Postives = 91/115 (79.13%), Query Frame = 1

Query: 1   MVRAPYFD-ENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWIN 60
           MVR P    E GLKKGAW+P+ED+KL +Y+++HG   WR LP  AGL RCGKSCRLRW N
Sbjct: 1   MVRTPCCKAELGLKKGAWTPEEDQKLLSYLNRHGEGGWRTLPEKAGLKRCGKSCRLRWAN 60

Query: 61  YLCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKK 115
           YL PD+KRG ++++EER I+ LH  HGNKWS +A  LPGRTDNEIKNYW+TH+KK
Sbjct: 61  YLRPDIKRGEFTEDEERSIISLHALHGNKWSAIARGLPGRTDNEIKNYWNTHIKK 115

BLAST of CmoCh19G009840 vs. Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVR P   E G+KKGAW+P+ED+KL AY+H HG   WR LP  AGL RCGKSCRLRW NY
Sbjct: 1   MVRTPCCKEEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKAGLKRCGKSCRLRWANY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKK 115
           L PD+KRG +S EE+  I++LH   GNKW+ +AT L GRTDNEIKNYW+T+LKK
Sbjct: 61  LRPDIKRGEFSPEEDDTIIKLHALKGNKWAAIATSLAGRTDNEIKNYWNTNLKK 114

BLAST of CmoCh19G009840 vs. Swiss-Prot
Match: MYB29_ARATH (Transcription factor MYB29 OS=Arabidopsis thaliana GN=MYB29 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-40
Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           M R P     GLKKGAW+ +ED+KL +Y+H+HG   WR++P+ AGL RCGKSCRLRW NY
Sbjct: 1   MSRKPCCVGEGLKKGAWTAEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASK 120
           L PD+KRG +S EEE++I+ LH   GNKWS++A  LP RTDNEIKNYW+THLKK+   K
Sbjct: 61  LKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEIKNYWNTHLKKLLIDK 119

BLAST of CmoCh19G009840 vs. TrEMBL
Match: A0A067JXL7_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_26464 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 137/262 (52.29%), Postives = 168/262 (64.12%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP+FD+NGLKKGAWS +ED+KL+AYV ++GH NWRELP+FAGLSRCGKSCRLRWINY
Sbjct: 1   MVRAPFFDKNGLKKGAWSQEEDDKLRAYVQRYGHWNWRELPKFAGLSRCGKSCRLRWINY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLK-KVKASK 120
           L P VK GNYSKEEE LI++LH++ GNKWS +A KLPGRTDNEIKNYWH+HLK + K S+
Sbjct: 61  LRPGVKHGNYSKEEEDLIIRLHEQFGNKWSKIAAKLPGRTDNEIKNYWHSHLKRRAKKSE 120

Query: 121 VKKKQQNEAISMKERETEMKANL-----ISEVP-SHEILESSPFS--PLSSEISTVCSNQ 180
                + +  +    E     NL     I++ P SH ILES P S  P SSE+S + S  
Sbjct: 121 SSNGMKEQCSTETLCEVSQTRNLKIESYIAKTPYSHPILESYPLSAEPSSSEVSHLSSAD 180

Query: 181 ESTQDSPPTTFKFQ-------ETSNNNNGDFWDVPFLVDN-------LEAQSQDPMFFHI 240
                +  T+   +       ET  + +GDFW  PF+ D        L+     P F   
Sbjct: 181 SCLVTASATSCNVEDRVSYSFETFEDTSGDFWTQPFVADQDGYILSVLDGGFTSPSF--T 240

BLAST of CmoCh19G009840 vs. TrEMBL
Match: A0A067EY03_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042846mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-58
Identity = 128/246 (52.03%), Postives = 163/246 (66.26%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP +DENG+KKGAWS +ED+KL+AY+ K+GH NW ELP+FAGLSRCGKSCRLRW+NY
Sbjct: 1   MVRAPTYDENGMKKGAWSKEEDDKLRAYILKYGHWNWGELPKFAGLSRCGKSCRLRWMNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVK---- 120
           L PD+K GNY+KEEE  I++L Q+HGNKWSL+A KLPGRTDNEIKNYWHTHLKK K    
Sbjct: 61  LRPDIKHGNYTKEEEDTIIRLRQQHGNKWSLIAAKLPGRTDNEIKNYWHTHLKKRKNKDP 120

Query: 121 ---ASKVKKKQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQES 180
              +S  +    NE  S  ++    + NL    P   +LESSP SP     ST+ S+   
Sbjct: 121 ASSSSTQEHSYNNEETSQSDQAESERLNLADHTPL-AVLESSPISP-----STLSSSDHH 180

Query: 181 TQDSPPTTFKFQETSNNNNGDFWDVPFLVDNLEAQSQDPMFFHINYDFEF-DQADLFYQV 239
            + +  +  K      + NGDFW  PFL DN    +Q+  +  ++YD  + D  D FYQ 
Sbjct: 181 HRHAIASGAK--SLFEDINGDFWTQPFLSDN--NYNQNNHYSSLSYDSCYEDSIDQFYQA 236

BLAST of CmoCh19G009840 vs. TrEMBL
Match: V4W3W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017677mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-58
Identity = 127/246 (51.63%), Postives = 163/246 (66.26%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP +DENG+KKGAWS +ED+KL+AY+ K+GH NWRE+P+FAGLSRCGKSCRLRW+NY
Sbjct: 1   MVRAPTYDENGMKKGAWSKEEDDKLRAYILKYGHWNWREIPKFAGLSRCGKSCRLRWMNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVK---- 120
           L PD+K G+Y+KEEE  I++L Q+HGNKWSL+A KLPGRTDNEIKNYWHTHLKK K    
Sbjct: 61  LRPDIKHGSYTKEEEDTIIRLRQQHGNKWSLIAAKLPGRTDNEIKNYWHTHLKKRKNKDP 120

Query: 121 ---ASKVKKKQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQES 180
              +S  +    NE  S  ++    + NL    P   +LESSP SP     ST  S+   
Sbjct: 121 ASSSSTQEHSYNNEETSQSDQAESERLNLADHTPL-AVLESSPISP-----STTSSSDHH 180

Query: 181 TQDSPPTTFKFQETSNNNNGDFWDVPFLVDNLEAQSQDPMFFHINYDFEF-DQADLFYQV 239
            + +  +  K      + NGDFW  PFL DN    +Q+  +  ++YD  + D  D FYQ 
Sbjct: 181 HRHAVASGAK--NLFEDINGDFWTQPFLSDN--NYNQNNHYSSLSYDSCYEDSIDQFYQA 236

BLAST of CmoCh19G009840 vs. TrEMBL
Match: B9INU4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14130g PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.8e-56
Identity = 128/267 (47.94%), Postives = 165/267 (61.80%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAPYFD+NG+KKGAWS +ED+KL+ ++ K+G  NWRE+P+FAGLSRCGKSCRLRW+NY
Sbjct: 1   MVRAPYFDKNGVKKGAWSEEEDDKLREHIEKYGLWNWREIPKFAGLSRCGKSCRLRWMNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASK- 120
           L PDVK GNY+KEEE LIL+LH++HGNKWS++A KLPGRTDNE+KNYWH HLKK    K 
Sbjct: 61  LRPDVKHGNYTKEEEDLILKLHEKHGNKWSIIAAKLPGRTDNEVKNYWHAHLKKRTVEKQ 120

Query: 121 ---VKKKQQNEAISMKE---RETEMKA-NLISEVPSHEILESSPFSPLSSEISTVCSNQE 180
              V K++ +   S  E      EM+A  ++S  PS+ ILES+P SP      T CS   
Sbjct: 121 NTLVLKEKSSGFTSESEGSQMNKEMEAKTVVSYTPSNPILESTPLSP-----ETSCSELS 180

Query: 181 STQDSPPTTFKFQETSNNNN----------------GDFWDVPFLVDNLEAQSQDP-MFF 240
           +              +N NN                G+FW  PF+ D+   Q   P + F
Sbjct: 181 NLSTDFAPKLPVSAGTNRNNIAEDVLSSVPTFDESIGNFWTEPFVADSAYDQDNFPGLSF 240

BLAST of CmoCh19G009840 vs. TrEMBL
Match: A0A067JNK2_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_03738 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 130/250 (52.00%), Postives = 165/250 (66.00%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVR    D+NGLKKGAWS +ED+KL+AY+ K GHCNWRELP+FAGLSRCGKSCRLRW+NY
Sbjct: 1   MVRTASVDKNGLKKGAWSREEDDKLRAYIMKRGHCNWRELPKFAGLSRCGKSCRLRWVNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKK--VKAS 120
           L P VK GN+S+EEE LI+QLHQE GNKWS +A KLPGRTDNEIKN+WHT LKK  ++ +
Sbjct: 61  LRPGVKHGNFSEEEENLIIQLHQELGNKWSRIAMKLPGRTDNEIKNHWHTRLKKLLLEQT 120

Query: 121 KVKKKQQNEAIS--MKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQEST-- 180
           +V  +Q  E  S     +  E ++  I+  PS  I+  S  SPLS+EIS   S Q S+  
Sbjct: 121 QVATEQVKEQSSEIPPSQNIEAESVDIAVTPSLPIILES--SPLSNEISDYSSVQTSSNC 180

Query: 181 --QDSPPTTFK---FQETSNNNNGDFWDVPFLVDNLEAQSQDPMFFHINYDFEFDQADLF 240
             +D+   T     F+ET      DFW  PF+ D++  Q      + + YD   D  D  
Sbjct: 181 VAEDAHSFTSMMGIFEETGE----DFWTAPFVEDHIYNQDFYASSYSLYYD---DNMDFI 240

BLAST of CmoCh19G009840 vs. TAIR10
Match: AT5G65230.1 (AT5G65230.1 myb domain protein 53)

HSP 1 Score: 177.9 bits (450), Expect = 7.4e-45
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           M R+P  DE GLKKG W P+ED+KL  Y+HKHGH +W  LP+ AGL+RCGKSCRLRW NY
Sbjct: 1   MGRSPSSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLRWTNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKK 115
           L PD+KRG +S EEE  IL LH   GNKWS++A+ LPGRTDNEIKN+W+THLKK
Sbjct: 61  LRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKK 114

BLAST of CmoCh19G009840 vs. TAIR10
Match: AT3G23250.1 (AT3G23250.1 myb domain protein 15)

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-44
Identity = 94/179 (52.51%), Postives = 122/179 (68.16%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           M RAP  ++ GLK+G W+P+ED+ L +++  HGH NWR LP+ AGL RCGKSCRLRW+NY
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLK------- 120
           L PD+KRGN++KEEE  I+ LHQ  GN+WS +A KLPGRTDNEIKN WHTHLK       
Sbjct: 61  LKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLEDYQ 120

Query: 121 --KVKASKVKK--KQQNEAISMKERETEMKANLI-SEVPSHEILESSPFSPLSSEISTV 168
             K K S  KK  K ++E++      T  ++ L  S  PS E L S+  SP +SE+S++
Sbjct: 121 PAKPKTSNKKKGTKPKSESVITSSNSTRSESELADSSNPSGESLFST--SPSTSEVSSM 177

BLAST of CmoCh19G009840 vs. TAIR10
Match: AT1G16490.1 (AT1G16490.1 myb domain protein 58)

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-44
Identity = 94/175 (53.71%), Postives = 116/175 (66.29%), Query Frame = 1

Query: 3   RAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINYLC 62
           RAP  D+  +K+G WS DED KL +++HK+GH NWR LP+ AGL RCGKSCRLRWINYL 
Sbjct: 5   RAPCCDKTKVKRGPWSHDEDLKLISFIHKNGHENWRSLPKQAGLLRCGKSCRLRWINYLR 64

Query: 63  PDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASKVKK 122
           PDVKRGN+S EEE  I++LHQ  GNKWS +A+KLPGRTDNEIKN WHTHLKK  +S+   
Sbjct: 65  PDVKRGNFSAEEEDTIIKLHQSFGNKWSKIASKLPGRTDNEIKNVWHTHLKKRLSSET-- 124

Query: 123 KQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQESTQDS 178
                  ++   E   K +L  E  S    ESSP + +S   S + S  +  Q S
Sbjct: 125 -------NLNADEAGSKGSLNEEENSQ---ESSPNASMSFAGSNISSKDDDAQIS 167

BLAST of CmoCh19G009840 vs. TAIR10
Match: AT3G02940.1 (AT3G02940.1 myb domain protein 107)

HSP 1 Score: 172.2 bits (435), Expect = 4.1e-43
Identity = 93/209 (44.50%), Postives = 129/209 (61.72%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           M R+P  DE+GLKKG W+P+ED+KL  ++ KHGH +WR LP+ AGL+RCGKSCRLRW NY
Sbjct: 1   MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASKV 120
           L PD+KRGN++ EEE+ I+ LH   GNKWS +A  LPGRTDNEIKNYW+TH++       
Sbjct: 61  LRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIR------- 120

Query: 121 KKKQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQESTQDSPPT 180
           KK  Q     +  R      N+++ +P  ++L ++ F+ L +    +  +  S   +   
Sbjct: 121 KKLIQMGIDPVTHRPRTDHLNVLAALP--QLLAAANFNNLLNLNQNIQLDATSVAKAQLL 180

Query: 181 TFKFQETSNNNNGDFWDVPFLVDNLEAQS 210
               Q  SNNN    +D+    +NL  QS
Sbjct: 181 HSMIQVLSNNNTSSSFDIHHTTNNLFGQS 200

BLAST of CmoCh19G009840 vs. TAIR10
Match: AT4G21440.1 (AT4G21440.1 MYB-like 102)

HSP 1 Score: 171.4 bits (433), Expect = 6.9e-43
Identity = 73/114 (64.04%), Postives = 91/114 (79.82%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           M R+P  ++NGLKKG W+ +ED+KL  Y+ KHG+ NWR LP+ AGL RCGKSCRLRW NY
Sbjct: 1   MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKK 115
           L PD+KRG +S EEE  I+QLH   GNKWS +A +LPGRTDNEIKN+W+TH++K
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRK 114

BLAST of CmoCh19G009840 vs. NCBI nr
Match: gi|659110699|ref|XP_008455365.1| (PREDICTED: transcription factor WER-like [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 3.3e-87
Identity = 183/270 (67.78%), Postives = 213/270 (78.89%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP++D+NG+KKGAWS +EDEKL+AYV +HGHCNWRELPR+AGL RCGKSCRLRWINY
Sbjct: 1   MVRAPFYDKNGIKKGAWSAEEDEKLRAYVQEHGHCNWRELPRYAGLLRCGKSCRLRWINY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASKV 120
           L PDVKRGNYSKEEE+LILQLHQ++GNKWS++ATKLPGRTDNEIKNYWHTHLKKVK++K 
Sbjct: 61  LRPDVKRGNYSKEEEQLILQLHQQYGNKWSMIATKLPGRTDNEIKNYWHTHLKKVKSNKN 120

Query: 121 KKKQQNEAI-----SMKERET----EMKANLISEVP--SHEILESSPFSPLSSEISTVCS 180
            KK QNE I     S+++RET    E K NL +E+   SH+I ESSP S LSSEISTV S
Sbjct: 121 TKKHQNEEISGNNKSIQKRETTIISENKTNLTNEIMPLSHQIFESSPISTLSSEISTVTS 180

Query: 181 NQESTQDSPPT-TFKFQET--SNNNNGDFWDVP-FLVDN-LEAQS-QDPM------FFHI 240
           NQESTQDSPPT  FKFQE    ++NNGD W  P F+ +N LEA+S Q+P+       F+ 
Sbjct: 181 NQESTQDSPPTPLFKFQEEPYDHHNNGDLWVNPLFVAENYLEAESDQNPINFGFIGGFNQ 240

Query: 241 NYDFE-FDQADLFYQVMKELPENYQPYLYP 247
            YDFE  D+  LF Q MKELPENYQ  LYP
Sbjct: 241 PYDFELLDENYLFCQAMKELPENYQSQLYP 270

BLAST of CmoCh19G009840 vs. NCBI nr
Match: gi|449438468|ref|XP_004137010.1| (PREDICTED: transcription repressor MYB6-like [Cucumis sativus])

HSP 1 Score: 312.4 bits (799), Expect = 7.1e-82
Identity = 175/269 (65.06%), Postives = 202/269 (75.09%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP++DENG+KKGAWS +EDEKL+AYV ++GHCNWRELPR+AGL RCGKSCRLRWINY
Sbjct: 1   MVRAPFYDENGIKKGAWSAEEDEKLRAYVQEYGHCNWRELPRYAGLLRCGKSCRLRWINY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVKASKV 120
           L PDVKRGNYSKEEE+LILQLHQ++GNKWS++ATKLPGRTDNEIKNYWHTHLKKVK++K 
Sbjct: 61  LRPDVKRGNYSKEEEQLILQLHQQYGNKWSMIATKLPGRTDNEIKNYWHTHLKKVKSNKN 120

Query: 121 KKKQQNEAI-----SMKERET----EMKANLISEV--PSHEILESSPFSPLSSEISTVCS 180
            KK + E I      +++RET    E K  L  E+   SH+I ESS FS LSSEISTV S
Sbjct: 121 AKKHEEEEICSNKKPIQKRETTITSEDKTILTKEILPLSHQIFESSSFSTLSSEISTVTS 180

Query: 181 NQESTQDSPPT-TFKFQET--SNNNNGDFWDVP-FLVDN-LEAQSQDPMF-------FHI 240
           NQESTQDSPPT  FKFQE    ++NNGDFW  P F  +N  EA+S            F+ 
Sbjct: 181 NQESTQDSPPTPLFKFQEEPYDHHNNGDFWANPLFEAENYFEAESDQNSINFGFTGGFNH 240

Query: 241 NYDFE-FDQADLFYQVMKELPENYQPYLY 246
            YDFE  D+  L  Q MKELPENYQ  LY
Sbjct: 241 TYDFELLDENYLLDQAMKELPENYQSQLY 269

BLAST of CmoCh19G009840 vs. NCBI nr
Match: gi|802749940|ref|XP_012087685.1| (PREDICTED: myb-related protein Myb4-like [Jatropha curcas])

HSP 1 Score: 238.0 bits (606), Expect = 1.7e-59
Identity = 137/262 (52.29%), Postives = 168/262 (64.12%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP+FD+NGLKKGAWS +ED+KL+AYV ++GH NWRELP+FAGLSRCGKSCRLRWINY
Sbjct: 1   MVRAPFFDKNGLKKGAWSQEEDDKLRAYVQRYGHWNWRELPKFAGLSRCGKSCRLRWINY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLK-KVKASK 120
           L P VK GNYSKEEE LI++LH++ GNKWS +A KLPGRTDNEIKNYWH+HLK + K S+
Sbjct: 61  LRPGVKHGNYSKEEEDLIIRLHEQFGNKWSKIAAKLPGRTDNEIKNYWHSHLKRRAKKSE 120

Query: 121 VKKKQQNEAISMKERETEMKANL-----ISEVP-SHEILESSPFS--PLSSEISTVCSNQ 180
                + +  +    E     NL     I++ P SH ILES P S  P SSE+S + S  
Sbjct: 121 SSNGMKEQCSTETLCEVSQTRNLKIESYIAKTPYSHPILESYPLSAEPSSSEVSHLSSAD 180

Query: 181 ESTQDSPPTTFKFQ-------ETSNNNNGDFWDVPFLVDN-------LEAQSQDPMFFHI 240
                +  T+   +       ET  + +GDFW  PF+ D        L+     P F   
Sbjct: 181 SCLVTASATSCNVEDRVSYSFETFEDTSGDFWTQPFVADQDGYILSVLDGGFTSPSF--T 240

BLAST of CmoCh19G009840 vs. NCBI nr
Match: gi|567910201|ref|XP_006447414.1| (hypothetical protein CICLE_v10017677mg [Citrus clementina])

HSP 1 Score: 233.0 bits (593), Expect = 5.5e-58
Identity = 127/246 (51.63%), Postives = 163/246 (66.26%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP +DENG+KKGAWS +ED+KL+AY+ K+GH NWRE+P+FAGLSRCGKSCRLRW+NY
Sbjct: 1   MVRAPTYDENGMKKGAWSKEEDDKLRAYILKYGHWNWREIPKFAGLSRCGKSCRLRWMNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVK---- 120
           L PD+K G+Y+KEEE  I++L Q+HGNKWSL+A KLPGRTDNEIKNYWHTHLKK K    
Sbjct: 61  LRPDIKHGSYTKEEEDTIIRLRQQHGNKWSLIAAKLPGRTDNEIKNYWHTHLKKRKNKDP 120

Query: 121 ---ASKVKKKQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQES 180
              +S  +    NE  S  ++    + NL    P   +LESSP SP     ST  S+   
Sbjct: 121 ASSSSTQEHSYNNEETSQSDQAESERLNLADHTPL-AVLESSPISP-----STTSSSDHH 180

Query: 181 TQDSPPTTFKFQETSNNNNGDFWDVPFLVDNLEAQSQDPMFFHINYDFEF-DQADLFYQV 239
            + +  +  K      + NGDFW  PFL DN    +Q+  +  ++YD  + D  D FYQ 
Sbjct: 181 HRHAVASGAK--NLFEDINGDFWTQPFLSDN--NYNQNNHYSSLSYDSCYEDSIDQFYQA 236

BLAST of CmoCh19G009840 vs. NCBI nr
Match: gi|641836861|gb|KDO55821.1| (hypothetical protein CISIN_1g042846mg [Citrus sinensis])

HSP 1 Score: 233.0 bits (593), Expect = 5.5e-58
Identity = 128/246 (52.03%), Postives = 163/246 (66.26%), Query Frame = 1

Query: 1   MVRAPYFDENGLKKGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINY 60
           MVRAP +DENG+KKGAWS +ED+KL+AY+ K+GH NW ELP+FAGLSRCGKSCRLRW+NY
Sbjct: 1   MVRAPTYDENGMKKGAWSKEEDDKLRAYILKYGHWNWGELPKFAGLSRCGKSCRLRWMNY 60

Query: 61  LCPDVKRGNYSKEEERLILQLHQEHGNKWSLMATKLPGRTDNEIKNYWHTHLKKVK---- 120
           L PD+K GNY+KEEE  I++L Q+HGNKWSL+A KLPGRTDNEIKNYWHTHLKK K    
Sbjct: 61  LRPDIKHGNYTKEEEDTIIRLRQQHGNKWSLIAAKLPGRTDNEIKNYWHTHLKKRKNKDP 120

Query: 121 ---ASKVKKKQQNEAISMKERETEMKANLISEVPSHEILESSPFSPLSSEISTVCSNQES 180
              +S  +    NE  S  ++    + NL    P   +LESSP SP     ST+ S+   
Sbjct: 121 ASSSSTQEHSYNNEETSQSDQAESERLNLADHTPL-AVLESSPISP-----STLSSSDHH 180

Query: 181 TQDSPPTTFKFQETSNNNNGDFWDVPFLVDNLEAQSQDPMFFHINYDFEF-DQADLFYQV 239
            + +  +  K      + NGDFW  PFL DN    +Q+  +  ++YD  + D  D FYQ 
Sbjct: 181 HRHAIASGAK--SLFEDINGDFWTQPFLSDN--NYNQNNHYSSLSYDSCYEDSIDQFYQA 236

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB4_ORYSJ4.2e-4244.17Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2[more]
MYB1_MAIZE4.7e-4164.46Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYB51_ARATH6.1e-4165.22Transcription factor MYB51 OS=Arabidopsis thaliana GN=MYB51 PE=1 SV=2[more]
MYB34_ARATH1.4e-4064.91Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1[more]
MYB29_ARATH2.3e-4061.34Transcription factor MYB29 OS=Arabidopsis thaliana GN=MYB29 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A067JXL7_JATCU1.2e-5952.29MYB family protein OS=Jatropha curcas GN=JCGZ_26464 PE=4 SV=1[more]
A0A067EY03_CITSI3.8e-5852.03Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042846mg PE=4 SV=1[more]
V4W3W2_9ROSI3.8e-5851.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017677mg PE=4 SV=1[more]
B9INU4_POPTR2.8e-5647.94Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14130g PE=4 SV=1[more]
A0A067JNK2_JATCU1.8e-5552.00MYB family protein OS=Jatropha curcas GN=JCGZ_03738 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G65230.17.4e-4567.54 myb domain protein 53[more]
AT3G23250.12.8e-4452.51 myb domain protein 15[more]
AT1G16490.13.7e-4453.71 myb domain protein 58[more]
AT3G02940.14.1e-4344.50 myb domain protein 107[more]
AT4G21440.16.9e-4364.04 MYB-like 102[more]
Match NameE-valueIdentityDescription
gi|659110699|ref|XP_008455365.1|3.3e-8767.78PREDICTED: transcription factor WER-like [Cucumis melo][more]
gi|449438468|ref|XP_004137010.1|7.1e-8265.06PREDICTED: transcription repressor MYB6-like [Cucumis sativus][more]
gi|802749940|ref|XP_012087685.1|1.7e-5952.29PREDICTED: myb-related protein Myb4-like [Jatropha curcas][more]
gi|567910201|ref|XP_006447414.1|5.5e-5851.63hypothetical protein CICLE_v10017677mg [Citrus clementina][more]
gi|641836861|gb|KDO55821.1|5.5e-5852.03hypothetical protein CISIN_1g042846mg [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009733 response to auxin
biological_process GO:0009414 response to water deprivation
biological_process GO:0009611 response to wounding
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G009840.1CmoCh19G009840.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..61
score: 4.2E-16coord: 67..112
score: 1.3
IPR001005SANT/Myb domainSMARTSM00717santcoord: 66..114
score: 5.2E-17coord: 13..63
score: 1.9
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 69..114
score: 2.5E-25coord: 15..68
score: 2.0
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..108
score: 2.26
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..61
score: 17.004coord: 62..116
score: 23
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..204
score: 1.2
NoneNo IPR availablePANTHERPTHR10641:SF541SUBFAMILY NOT NAMEDcoord: 1..204
score: 1.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G009840CmoCh13G007030Cucurbita moschata (Rifu)cmocmoB177
CmoCh19G009840CmoCh20G005930Cucurbita moschata (Rifu)cmocmoB381
CmoCh19G009840CmoCh02G001360Cucurbita moschata (Rifu)cmocmoB389