CSPI07G04190 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAGAGCTCCATTTTATGATGAAAATGGAATTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAAAAGCTCAGAGCTTATGTTCAAGAATATGGTCATTGCAATTGGCGAGAGCTTCCTAGATATGCTGGTAATTCGTTCGCTAAAGTTACTAAGTTAATTCATTGATTAATTGATTGATGATTGATTCATATAAACCTCCAAAATCCCTTTTGGGTATAATATGTAATTGACAAATTAAAGAACTAATGACCCATTTGAAAAAAAATATATGGCTCCTTATACTTGGTTTTGTTTTCAATTGCTTTACTAAAACCTTGTAGAGAGATGGACTATACCATAACTTACAAAGTATTATGATCCTTTTGAGTTCATATTTGATCTTGATCTTCTTTTCTCTCAAGTTCTCTTGTAAAATTCAAAACATCCATTTAAAAAGAAAATGGCCCTCTTTTACTTAATTTCAGTTTAAATTTCTTTAATTATATACACCTTATTGTGAGATGAACTGGATATCCCCCATTAATTAAGTTTAATTTTGATTTTCTTCTTTCTTTGAAATTAATTATTTAGTAAAACCCCAAATAACCCACTTAAAAAAAATAGCCCTTTTTACTTAACTTTGTTTTTTTCGACTGCTTCAATAAAAACCTTATAGATAGACGAATCAGATAGTTTCATTTTAGGGTTTATTCTTCTTTCTTTGAAGTTAGTAAAAACAAAAACAATAACCCAGCTGGAATCAAAGAGGGCTCCTTTAGTTTTAGTATAGTTTAGGTTTTAATAGAGAAATTAATAATTGAGAATATCACCTTAGTGTTCAATCCATATCTTCTTCTTTCCTATGAAGTTTGTTTTGTAGAATCTCATTTCCAAAAGATGTCTTCTTTTTCTAATTACTTTAATAAACCAAGTTATGCATATAACTTAATTACATATTCTTGATGAACATGGTATAATTAATTTAATTAAACAAGTATTCTATTGAGATACTGAGATTTGGTTGTGATTTTTTTCATGATTAGGTTTGTTGAGGTGTGGTAAAAGTTGTCGACTGCGTTGGACCAATTACCTTCGTCCAGATGTGAAAAGAGGCAATTACTCCAAAGAAGAAGAACAATTAATCCTACAATTGCATCAACAATATGGAAACAAGTATGATTTTTTCTTTCTAAGTATTAATTTCATCAAACATTAATATCACATGTTTTCAATATATATATGCATCTCTCTTATGATATATCATTACCAATGTTACTTCTGATAACTAGAGAGCTTTCCTTTAATTTAATCACTCCTTTATACATTTCTTGTATGCTATCAATGAATCATCCTTTTTCAATAAATAAAAGAAAATACATTTCATCTTCAGAAGAACGATTAGATTAGAATTAAGGTTAAGTATCCTTCCATTTGAGTATTAGCTAATTTTGTTCAAATAATTAATCTATTCAAATATTTTTTTTTAGGTTGAACGGATTTGTCATAGTTATGCTATACAATAGTTTTGTGTAGTTAAATTAGTTAAAATATGTCCGAAAAATTCTCTTATCGTAATATTAGTTATATTTATAATGTATGATTAATTTTTTCTTCAGATGGTCAATGATAGCTACAAAATTACCCGGACGAACCGATAACGAAATAAAGAATTATTGGCATACCCATTTAAAGAAGGTGAAAAGCAACAAGAATGCAAAGAAGCATGAGGAGGAGGAAATTTGCAGTAATAAAAAACCCATCCAAAAGAGAGAAACTACAATAACATCAGAAGACAAAACCATTCTGACCAATGAAATACTGCCATTATCTCATCAGATATTTGAAAGCTCTTCATTTTCGACTTTGTCCTCTGAAATTTCCACAGTGACCTCGAATCAAGAATCCACACAAGATAGCCCTCCAACACCATTATTCAAGTTTCAAGAAGAACCATATGATCATCATAACAATGGAGATTTTTGGGCTAATCCATTGTTTGAAGCTGAAAATTATTTTGAAGCTGAAAGTGATCAAAACTCAATCAACTTTGGTTTTACTGGAGGCTTCAATCACACTTATGATTTTGAGTTACTTGATGAAAACTACTTGTTAGATCAAGCAATGAAAGAATTGCCTGAAAATTATCAATCCCAATTGTATCTCTTTTGA ATGGTTAGAGCTCCATTTTATGATGAAAATGGAATTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAAAAGCTCAGAGCTTATGTTCAAGAATATGGTCATTGCAATTGGCGAGAGCTTCCTAGATATGCTGGTTTGTTGAGGTGTGGTAAAAGTTGTCGACTGCGTTGGACCAATTACCTTCGTCCAGATGTGAAAAGAGGCAATTACTCCAAAGAAGAAGAACAATTAATCCTACAATTGCATCAACAATATGGAAACAAATGGTCAATGATAGCTACAAAATTACCCGGACGAACCGATAACGAAATAAAGAATTATTGGCATACCCATTTAAAGAAGGTGAAAAGCAACAAGAATGCAAAGAAGCATGAGGAGGAGGAAATTTGCAGTAATAAAAAACCCATCCAAAAGAGAGAAACTACAATAACATCAGAAGACAAAACCATTCTGACCAATGAAATACTGCCATTATCTCATCAGATATTTGAAAGCTCTTCATTTTCGACTTTGTCCTCTGAAATTTCCACAGTGACCTCGAATCAAGAATCCACACAAGATAGCCCTCCAACACCATTATTCAAGTTTCAAGAAGAACCATATGATCATCATAACAATGGAGATTTTTGGGCTAATCCATTGTTTGAAGCTGAAAATTATTTTGAAGCTGAAAGTGATCAAAACTCAATCAACTTTGGTTTTACTGGAGGCTTCAATCACACTTATGATTTTGAGTTACTTGATGAAAACTACTTGTTAGATCAAGCAATGAAAGAATTGCCTGAAAATTATCAATCCCAATTGTATCTCTTTTGA ATGGTTAGAGCTCCATTTTATGATGAAAATGGAATTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAAAAGCTCAGAGCTTATGTTCAAGAATATGGTCATTGCAATTGGCGAGAGCTTCCTAGATATGCTGGTTTGTTGAGGTGTGGTAAAAGTTGTCGACTGCGTTGGACCAATTACCTTCGTCCAGATGTGAAAAGAGGCAATTACTCCAAAGAAGAAGAACAATTAATCCTACAATTGCATCAACAATATGGAAACAAATGGTCAATGATAGCTACAAAATTACCCGGACGAACCGATAACGAAATAAAGAATTATTGGCATACCCATTTAAAGAAGGTGAAAAGCAACAAGAATGCAAAGAAGCATGAGGAGGAGGAAATTTGCAGTAATAAAAAACCCATCCAAAAGAGAGAAACTACAATAACATCAGAAGACAAAACCATTCTGACCAATGAAATACTGCCATTATCTCATCAGATATTTGAAAGCTCTTCATTTTCGACTTTGTCCTCTGAAATTTCCACAGTGACCTCGAATCAAGAATCCACACAAGATAGCCCTCCAACACCATTATTCAAGTTTCAAGAAGAACCATATGATCATCATAACAATGGAGATTTTTGGGCTAATCCATTGTTTGAAGCTGAAAATTATTTTGAAGCTGAAAGTGATCAAAACTCAATCAACTTTGGTTTTACTGGAGGCTTCAATCACACTTATGATTTTGAGTTACTTGATGAAAACTACTTGTTAGATCAAGCAATGAAAGAATTGCCTGAAAATTATCAATCCCAATTGTATCTCTTTTGA
BLAST of CSPI07G04190 vs. Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 2.3e-41 Identity = 92/195 (47.18%), Postives = 126/195 (64.62%), Query Frame = 1
BLAST of CSPI07G04190 vs. Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40 Identity = 75/121 (61.98%), Postives = 95/121 (78.51%), Query Frame = 1
BLAST of CSPI07G04190 vs. Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.7e-40 Identity = 71/114 (62.28%), Postives = 93/114 (81.58%), Query Frame = 1
BLAST of CSPI07G04190 vs. Swiss-Prot
Match: MY122_ARATH (Transcription factor MYB122 OS=Arabidopsis thaliana GN=MYB122 PE=1 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.7e-40 Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 1
BLAST of CSPI07G04190 vs. Swiss-Prot
Match: MYB29_ARATH (Transcription factor MYB29 OS=Arabidopsis thaliana GN=MYB29 PE=1 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 9.7e-40 Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of CSPI07G04190 vs. TrEMBL
Match: A0A067JXL7_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_26464 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 9.8e-55 Identity = 133/272 (48.90%), Postives = 164/272 (60.29%), Query Frame = 1
BLAST of CSPI07G04190 vs. TrEMBL
Match: M5XF33_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025095mg PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 5.4e-53 Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 1
BLAST of CSPI07G04190 vs. TrEMBL
Match: A0A067EY03_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042846mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.5e-52 Identity = 124/262 (47.33%), Postives = 160/262 (61.07%), Query Frame = 1
BLAST of CSPI07G04190 vs. TrEMBL
Match: V4W3W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017677mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.5e-52 Identity = 122/262 (46.56%), Postives = 162/262 (61.83%), Query Frame = 1
BLAST of CSPI07G04190 vs. TrEMBL
Match: A0A0B2S367_GLYSO (Myb-related protein Myb4 OS=Glycine soja GN=glysoja_017220 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52 Identity = 109/229 (47.60%), Postives = 150/229 (65.50%), Query Frame = 1
BLAST of CSPI07G04190 vs. TAIR10
Match: AT5G16770.1 (AT5G16770.1 myb domain protein 9) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-45 Identity = 78/114 (68.42%), Postives = 95/114 (83.33%), Query Frame = 1
BLAST of CSPI07G04190 vs. TAIR10
Match: AT3G23250.1 (AT3G23250.1 myb domain protein 15) HSP 1 Score: 178.3 bits (451), Expect = 6.3e-45 Identity = 103/238 (43.28%), Postives = 139/238 (58.40%), Query Frame = 1
BLAST of CSPI07G04190 vs. TAIR10
Match: AT1G79180.1 (AT1G79180.1 myb domain protein 63) HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44 Identity = 97/206 (47.09%), Postives = 132/206 (64.08%), Query Frame = 1
BLAST of CSPI07G04190 vs. TAIR10
Match: AT4G21440.1 (AT4G21440.1 MYB-like 102) HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44 Identity = 75/114 (65.79%), Postives = 96/114 (84.21%), Query Frame = 1
BLAST of CSPI07G04190 vs. TAIR10
Match: AT1G16490.1 (AT1G16490.1 myb domain protein 58) HSP 1 Score: 175.3 bits (443), Expect = 5.3e-44 Identity = 80/124 (64.52%), Postives = 97/124 (78.23%), Query Frame = 1
BLAST of CSPI07G04190 vs. NCBI nr
Match: gi|449438468|ref|XP_004137010.1| (PREDICTED: transcription repressor MYB6-like [Cucumis sativus]) HSP 1 Score: 552.7 bits (1423), Expect = 3.5e-154 Identity = 269/271 (99.26%), Postives = 269/271 (99.26%), Query Frame = 1
BLAST of CSPI07G04190 vs. NCBI nr
Match: gi|659110699|ref|XP_008455365.1| (PREDICTED: transcription factor WER-like [Cucumis melo]) HSP 1 Score: 498.4 bits (1282), Expect = 7.7e-138 Identity = 244/271 (90.04%), Postives = 249/271 (91.88%), Query Frame = 1
BLAST of CSPI07G04190 vs. NCBI nr
Match: gi|802749940|ref|XP_012087685.1| (PREDICTED: myb-related protein Myb4-like [Jatropha curcas]) HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54 Identity = 133/272 (48.90%), Postives = 164/272 (60.29%), Query Frame = 1
BLAST of CSPI07G04190 vs. NCBI nr
Match: gi|595953222|ref|XP_007216491.1| (hypothetical protein PRUPE_ppa025095mg, partial [Prunus persica]) HSP 1 Score: 216.1 bits (549), Expect = 7.7e-53 Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 1
BLAST of CSPI07G04190 vs. NCBI nr
Match: gi|645248212|ref|XP_008230194.1| (PREDICTED: myb-related protein Myb4-like [Prunus mume]) HSP 1 Score: 215.7 bits (548), Expect = 1.0e-52 Identity = 117/228 (51.32%), Postives = 156/228 (68.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |