CmaCh20G006530 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G006530
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMyb domain protein 15, putative
LocationCma_Chr20 : 3013752 .. 3014795 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAAATGGTGAAAATGGAAGAAAAAAGGGTAAATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGGTAATTCATTCATTCTGAACTAATTATTTCATGTTTGGTCACTTAGTTTTGCTAATAAACATGAACATGGAACCATTTAGGTCTATCCCGATGTGGAAAAAGTTGTAGATTGCGTTGGATGAACTACTTGAGACCTGATATCAAAAGAGGGAACTTCCAGAAGGAAGAGGATCAAACCATCCTTCGATTGCAAGCAACTCTCGGCAATAGGTATCTTTGTTGAGGATTGTGTAAGGAATAATAATATGATATTGTCTATTTTGAGCCTACATCTCTATTGGTACGAGGCCTTTTGTACTTGTTGGGAGTAAGTCTCACATTGGCTAATGTAGGGAATGATCATGAGTTTATAACTAAATGAATACATTTTCATTGGTATAAGGTCTTGGGAAGCCCAAAGCAAAGTCATAAAGTGAATAATATCGTACTATTGTCGAAAACCCTACTCTTACATATGCATAATGAATTTGGGCAGGTGGTCTGCCATTGCTACTTATTTACCAGGAAGAACAGATAATGAAATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAGAACCCGTCAAACACGGAGGTTGAAGATGCAGCAGCTAGTTCATGCTCGGAACTAAGAATCCGAGAAGAAGAAGAAGAATTGGATGAAACCCTTATTGTTTTGAATTCAGAAATGGCAACCCCAGAATTAGCAGCCAAGCATGAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAAGTCGGCGGCAACTTGTGGACCGATCCTTTTGTTTTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTTGAACATTATGAAATGTTTCCTCCCAGTAATTGA

mRNA sequence

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAAATGGTGAAAATGGAAGAAAAAAGGGTAAATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGGTCTATCCCGATGTGGAAAAAGTTGTAGATTGCGTTGGATGAACTACTTGAGACCTGATATCAAAAGAGGGAACTTCCAGAAGGAAGAGGATCAAACCATCCTTCGATTGCAAGCAACTCTCGGCAATAGGTGGTCTGCCATTGCTACTTATTTACCAGGAAGAACAGATAATGAAATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAGAACCCGTCAAACACGGAGGTTGAAGATGCAGCAGCTAGTTCATGCTCGGAACTAAGAATCCGAGAAGAAGAAGAAGAATTGGATGAAACCCTTATTGTTTTGAATTCAGAAATGGCAACCCCAGAATTAGCAGCCAAGCATGAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAAGTCGGCGGCAACTTGTGGACCGATCCTTTTGTTTTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTTGAACATTATGAAATGTTTCCTCCCAGTAATTGA

Coding sequence (CDS)

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAAATGGTGAAAATGGAAGAAAAAAGGGTAAATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGGTCTATCCCGATGTGGAAAAAGTTGTAGATTGCGTTGGATGAACTACTTGAGACCTGATATCAAAAGAGGGAACTTCCAGAAGGAAGAGGATCAAACCATCCTTCGATTGCAAGCAACTCTCGGCAATAGGTGGTCTGCCATTGCTACTTATTTACCAGGAAGAACAGATAATGAAATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAGAACCCGTCAAACACGGAGGTTGAAGATGCAGCAGCTAGTTCATGCTCGGAACTAAGAATCCGAGAAGAAGAAGAAGAATTGGATGAAACCCTTATTGTTTTGAATTCAGAAATGGCAACCCCAGAATTAGCAGCCAAGCATGAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAAGTCGGCGGCAACTTGTGGACCGATCCTTTTGTTTTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTTGAACATTATGAAATGTTTCCTCCCAGTAATTGA

Protein sequence

MEEEGDERERENGENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDAAASSCSELRIREEEEELDETLIVLNSEMATPELAAKHEGMNFGETETWVVGLNAEHSMEVGGNLWTDPFVFEDPLSLDNNPTHVPMDLFEHYEMFPPSN
Homology
[Close]
BLAST of CmaCh20G006530 vs. Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.2e-39
Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 1 

Query: 16  GRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNF 75
           G KKG W+ EED+ L A++ ++G  NWR +PK AGL RCGKSCRLRW+NYLRPDIKRGNF
Sbjct: 11  GLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNF 70

Query: 76  QKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLD 123
            KEE+ TI+ L   LGNRWSAIA  LPGRTDNEIKN WHT+LKK LD
Sbjct: 71  SKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLD 117

[Close]
BLAST of CmaCh20G006530 vs. Swiss-Prot
Match: MYB80_ORYSJ (Transcription factor MYB80 OS=Oryza sativa subsp. japonica GN=MYB80 PE=2 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 18  KKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNFQK 77
           K+G+W+ EED KL +Y+T+YG+ NWRLIPK AGL RCGKSCRLRW NYLRPD+K G F  
Sbjct: 13  KRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGEFTD 72

Query: 78  EEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLL 122
            E+QTI++L + +GNRWS IA  LPGRTDN++KNHW+T LKK L
Sbjct: 73  AEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKL 116

[Close]
BLAST of CmaCh20G006530 vs. Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-37
Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           + G KKG W  EED+KL AY+ + G  NWR +PK AGL+RCGKSCRLRWMNYLRPDI+RG
Sbjct: 10  DKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRG 69

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQ 124
            F   E+ TI+RL A LGN+WS IA +LPGRTDNEIKN+W+T+++K L Q
Sbjct: 70  KFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQ 119

[Close]
BLAST of CmaCh20G006530 vs. Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-37
Identity = 73/110 (66.36%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           E G KKG W+ EED+KL AY+  +G   WR +P+ AGL RCGKSCRLRW NYLRPDIKRG
Sbjct: 9   EEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKAGLKRCGKSCRLRWANYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQ 124
            F  EED TI++L A  GN+W+AIAT L GRTDNEIKN+W+TNLKK L Q
Sbjct: 69  EFSPEEDDTIIKLHALKGNKWAAIATSLAGRTDNEIKNYWNTNLKKRLKQ 118

[Close]
BLAST of CmaCh20G006530 vs. Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.9e-36
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = 1 

Query: 19  KGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNFQKE 78
           KG W+KEED+ L  Y+ K+G   WR +P+ AGL RCGKSCRLRWMNYLRPD+KRGNF +E
Sbjct: 14  KGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEE 73

Query: 79  EDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLK-KLLDQ--NPSNTEVEDAAA 138
           ED+ I++L + LGN+WS IA  LPGRTDNEIKN+W+T++K KLL +  +P++  + + + 
Sbjct: 74  EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRGIDPNSHRLINESV 133

Query: 139 SSCSELRIREEEEELDETLIVLNSEMATPELAAKHEGM-------------NFGETETWV 186
            S S L     + ++ ET+ +  S    PE   +  GM             ++G  E WV
Sbjct: 134 VSPSSL-----QNDVVETIHLDFSGPVKPEPVREEIGMVNNCESSGTTSEKDYGNEEDWV 191

[Close]
BLAST of CmaCh20G006530 vs. TrEMBL
Match: A0A059DFF5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01766 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 108/227 (47.58%), Postives = 139/227 (61.23%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED+KLRAYV++YG WNWR +PK+AGLSRCGKSCRLRWMNYLRPDIKRG
Sbjct: 9   KNGMKKGTWTPEEDKKLRAYVSRYGYWNWRKLPKYAGLSRCGKSCRLRWMNYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDA 133
           N+ KEE+ TI+RLQ  LGN+WSAIA++LPGRTDNE+KNHWHTNL+K L QN S T  ++A
Sbjct: 69  NYTKEEEDTIIRLQGLLGNKWSAIASHLPGRTDNEVKNHWHTNLRKRLSQNTSLTSPQEA 128

Query: 134 AASSCSELRIREEEEELDET-----------------------LIVLNSEMATPELAAKH 193
             +      +    + + ET                        + L+S      L+   
Sbjct: 129 TITENRSCDLEVGPKNMSETSPNNIFDFPINCPMPPQIVEGSASLHLSSSSRETSLSRCI 188

Query: 194 EGMNFGETETWVVGLNAEHSMEVGGNLWTDPFV----FEDPLSLDNN 214
           E ++F  TE         +  E  G+ WT+PF+     E  LSLD +
Sbjct: 189 EAVDFSNTE--CEASCDTYIAESSGSFWTEPFITDNNIESWLSLDES 233

[Close]
BLAST of CmaCh20G006530 vs. TrEMBL
Match: A0A151SVG1_CAJCA (Myb-related protein Myb4 OS=Cajanus cajan GN=KK1_014179 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 104/225 (46.22%), Postives = 143/225 (63.56%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED KL AY+TKYG WNWRL+PKFAGL+RCGKSCRLRW+NYLRPD+KRG
Sbjct: 9   QNGLKKGAWTPEEDRKLIAYITKYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPDVKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDA 133
           NF +EE++TI++L   LGNRWSAIA  LPGRTDNEIKNHWHT LKK +++  S  + E A
Sbjct: 69  NFSREEEETIVKLHEKLGNRWSAIAAELPGRTDNEIKNHWHTALKKRIEKKSSEAKRETA 128

Query: 134 AASSCSELRIREEEEELDETLIVLNSEMATPELAAKHEGMNFGETETWVVGLNAEHSMEV 193
                     +E+  +  ET++  +S+  T + AA     N    E WV  ++ ++   V
Sbjct: 129 ----------KEKLPKSMETVLENHSDSYTTDAAAAAAATN---RENWVPEIDDDYFFSV 188

Query: 194 G--------GNLWTDPFVFEDPLSLDNN--PTHVPMDLFEHYEMF 229
                     + WT+P++      +DN+  P    ++L+   E++
Sbjct: 189 DAYTESAVCADFWTEPYL------VDNSYVPPEYDVELWSQNELY 214

[Close]
BLAST of CmaCh20G006530 vs. TrEMBL
Match: A0A059DGA2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01767 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.2e-47
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED KL+AYV+KYG WNWR +PK+AGLSRCGKSCRLRWMNYLRPDIKRG
Sbjct: 9   KNGMKKGTWTPEEDRKLKAYVSKYGFWNWRQLPKYAGLSRCGKSCRLRWMNYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQN--PSNT 129
           N+ KEE+ TI+RLQ  LGN+WSAIA+ LPGRTDNE+KNHWHTNLKK L+QN  PS+T
Sbjct: 69  NYTKEEEDTIVRLQGLLGNKWSAIASQLPGRTDNEVKNHWHTNLKKRLNQNTQPSST 125

[Close]
BLAST of CmaCh20G006530 vs. TrEMBL
Match: A0A0D2NGT1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G016800 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-46
Identity = 97/202 (48.02%), Postives = 134/202 (66.34%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           ++G ++G W+ EED KL AYVT+YG WNWR +PKFAGL+RCGKSCRLRWMNYLRP++KRG
Sbjct: 9   KSGLRQGTWTAEEDRKLTAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDA 133
           NF KEED+TI+ L  +LGNRWSAIA  LPGRTDNEIKNHWHTNLKK     PS T++ D 
Sbjct: 69  NFTKEEDETIITLHESLGNRWSAIAAMLPGRTDNEIKNHWHTNLKKHAKHKPSTTKLHDK 128

Query: 134 AASSCSELRIREEEEELDETLIVLNSEMATPELAAKHEGMNFGETETWVVGLNAEHSMEV 193
             ++     + ++  +++  +  L  E + P   + +   +F  T+  V    A+     
Sbjct: 129 YTNN---QNLNDDHLQINPIIPPLILESSPPPPLSTNTQSSFTTTDNSVESTKADSV--- 188

Query: 194 GGNLWTDPFVFEDPLSLDNNPT 216
             + W++PF+ +  +  D+ PT
Sbjct: 189 -SDFWSEPFLLD--ILSDDLPT 201

[Close]
BLAST of CmaCh20G006530 vs. TrEMBL
Match: K7M2T3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G303200 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-46
Identity = 108/226 (47.79%), Postives = 137/226 (60.62%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED KL  YVTKYG WNWRL+PKFAGL+RCGKSCRLRW+NYLRPD+KRG
Sbjct: 9   KNGLKKGPWTPEEDRKLIDYVTKYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPDVKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPS---NTEV 133
           NF  EE++TI+RL   LGNRWSAIA  LPGRTDNEIKNHWHT LKK  ++ P     TE 
Sbjct: 69  NFSHEEEETIVRLHEKLGNRWSAIAAELPGRTDNEIKNHWHTALKKRFERKPKAKRRTEK 128

Query: 134 EDAAASSCSELRIREEEEE-----LDETLIVLNSEMATPELAAKHEGMNFGETETWVVGL 193
           E    S   E  + E   E      D    + N E +   L     G++F +T T     
Sbjct: 129 EGNVVSKSMERVVLENCSEYAVITTDAAAAITNHENSV--LEGDDYGLSFLDTYT----- 188

Query: 194 NAEHSMEVGGNLWTDPFVFEDPLSLDNN---PTHVPMDLFEHYEMF 229
                 +V  N WT+P++      +DN+   P    ++L+ H +++
Sbjct: 189 ----EPDVCANFWTEPYL------IDNSYVPPEGDVVELWSHNDLY 217

[Close]
BLAST of CmaCh20G006530 vs. TAIR10
Match: AT2G31180.1 (AT2G31180.1 myb domain protein 14)

HSP 1 Score: 161.8 bits (408), Expect = 5.2e-40
Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 1 

Query: 16  GRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNF 75
           G K+G W+ EED+ L  Y+  YG  NWR +PK AGL RCGKSCRLRW+NYLRPDIKRGNF
Sbjct: 11  GVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINYLRPDIKRGNF 70

Query: 76  QKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSN 128
             +E+QTI+ L  +LGNRWSAIA  LPGRTDNEIKN WHT+LKK L +N +N
Sbjct: 71  TPQEEQTIINLHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLSKNLNN 122

[Close]
BLAST of CmaCh20G006530 vs. TAIR10
Match: AT5G16770.1 (AT5G16770.1 myb domain protein 9)

HSP 1 Score: 161.4 bits (407), Expect = 6.8e-40
Identity = 73/110 (66.36%), Postives = 92/110 (83.64%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           ENG KKG W++EED+KL  ++ K+G  +WR +PK AGL+RCGKSCRLRW NYLRPDIKRG
Sbjct: 9   ENGLKKGPWTQEEDDKLIDHIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQ 124
           NF +EE+QTI+ L + LGN+WS+IA  LPGRTDNEIKN+W+T+L+K L Q
Sbjct: 69  NFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHLRKKLLQ 118

[Close]
BLAST of CmaCh20G006530 vs. TAIR10
Match: AT1G34670.1 (AT1G34670.1 myb domain protein 93)

HSP 1 Score: 161.4 bits (407), Expect = 6.8e-40
Identity = 75/110 (68.18%), Postives = 88/110 (80.00%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           ENG KKG W+ EED+KL  Y+ K+G  +WR +PK A L+RCGKSCRLRW NYLRPDIKRG
Sbjct: 9   ENGLKKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQ 124
            F  EE+QTIL L + LGN+WSAIAT+L GRTDNEIKN W+T+LKK L Q
Sbjct: 69  KFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKLIQ 118

[Close]
BLAST of CmaCh20G006530 vs. TAIR10
Match: AT1G06180.1 (AT1G06180.1 myb domain protein 13)

HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 1 

Query: 16  GRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNF 75
           G KKG WS EED  L  Y++ +G  NWR +PK AGL RCGKSCRLRW+NYLRPDIKRGNF
Sbjct: 11  GLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNF 70

Query: 76  QKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDAAA 135
              E+ TI+ L   LGNRWSAIA  LPGRTDNEIKN WHT+LKK L  +      ED  +
Sbjct: 71  TPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHSQDQNNKEDFVS 130

Query: 136 SSCSELRIREEEE 149
           ++ +E+    +++
Sbjct: 131 TTAAEMPTSPQQQ 143

[Close]
BLAST of CmaCh20G006530 vs. TAIR10
Match: AT5G15310.1 (AT5G15310.1 myb domain protein 16)

HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1 

Query: 16  GRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRGNF 75
           G KKG W+ EED+KL AY+ ++G  +WR +P+ AGL RCGKSCRLRW NYLRPDIKRG F
Sbjct: 11  GLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKF 70

Query: 76  QKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLL 122
             +E+QTI++L A LGNRWSAIAT+LP RTDNEIKN+W+T+LKK L
Sbjct: 71  NLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL 116

[Close]
BLAST of CmaCh20G006530 vs. NCBI nr
Match: gi|702254179|ref|XP_010069815.1| (PREDICTED: myb-related protein Myb4-like [Eucalyptus grandis])

HSP 1 Score: 203.8 bits (517), Expect = 3.4e-49
Identity = 108/227 (47.58%), Postives = 139/227 (61.23%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED+KLRAYV++YG WNWR +PK+AGLSRCGKSCRLRWMNYLRPDIKRG
Sbjct: 9   KNGMKKGTWTPEEDKKLRAYVSRYGYWNWRKLPKYAGLSRCGKSCRLRWMNYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDA 133
           N+ KEE+ TI+RLQ  LGN+WSAIA++LPGRTDNE+KNHWHTNL+K L QN S T  ++A
Sbjct: 69  NYTKEEEDTIIRLQGLLGNKWSAIASHLPGRTDNEVKNHWHTNLRKRLSQNTSLTSPQEA 128

Query: 134 AASSCSELRIREEEEELDET-----------------------LIVLNSEMATPELAAKH 193
             +      +    + + ET                        + L+S      L+   
Sbjct: 129 TITENRSCDLEVGPKNMSETSPNNIFDFPINCPMPPQIVEGSASLHLSSSSRETSLSRCI 188

Query: 194 EGMNFGETETWVVGLNAEHSMEVGGNLWTDPFV----FEDPLSLDNN 214
           E ++F  TE         +  E  G+ WT+PF+     E  LSLD +
Sbjct: 189 EAVDFSNTE--CEASCDTYIAESSGSFWTEPFITDNNIESWLSLDES 233

[Close]
BLAST of CmaCh20G006530 vs. NCBI nr
Match: gi|698510945|ref|XP_009800612.1| (PREDICTED: myb-related protein Myb4-like [Nicotiana sylvestris])

HSP 1 Score: 199.1 bits (505), Expect = 8.3e-48
Identity = 104/208 (50.00%), Postives = 138/208 (66.35%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           ENG+KKG W+ EED KL AYVTKYG WNWR +PK AGL+RCGKSCRLRWMNYLRP+IKRG
Sbjct: 9   ENGKKKGTWTPEEDRKLAAYVTKYGCWNWRQLPKHAGLARCGKSCRLRWMNYLRPNIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLD---QNPSNTEV 133
           N+ KEED  IL+L A LGNRWS IA +LPGR+DNEIKNHWHT+LKK  +    N S++E 
Sbjct: 69  NYTKEEDDIILKLHAQLGNRWSTIAAHLPGRSDNEIKNHWHTSLKKRANYYAPNSSDSES 128

Query: 134 EDAAASSCSELRIREEEEELDETLIVLNSEMATPELAAKHEGMNFGETETWVVGLNAEHS 193
           +    +S +  +  E +  +  T + L+S+M+  +  +  E ++   T+  V+       
Sbjct: 129 KSMNEASGTRRKSVENQNAISPTNLELSSQMSPKQ--SSSEQLSCYTTDYQVI-QEEGIL 188

Query: 194 MEVGGNLWTDPFVFEDPLSLDNNPTHVP 219
           ME  G+ WT+PF+ +   S  +    VP
Sbjct: 189 MENSGSFWTEPFLVDTSFSSRSTDYVVP 213

[Close]
BLAST of CmaCh20G006530 vs. NCBI nr
Match: gi|1012347567|gb|KYP58758.1| (Myb-related protein Myb4 [Cajanus cajan])

HSP 1 Score: 198.0 bits (502), Expect = 1.8e-47
Identity = 104/225 (46.22%), Postives = 143/225 (63.56%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED KL AY+TKYG WNWRL+PKFAGL+RCGKSCRLRW+NYLRPD+KRG
Sbjct: 9   QNGLKKGAWTPEEDRKLIAYITKYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPDVKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDA 133
           NF +EE++TI++L   LGNRWSAIA  LPGRTDNEIKNHWHT LKK +++  S  + E A
Sbjct: 69  NFSREEEETIVKLHEKLGNRWSAIAAELPGRTDNEIKNHWHTALKKRIEKKSSEAKRETA 128

Query: 134 AASSCSELRIREEEEELDETLIVLNSEMATPELAAKHEGMNFGETETWVVGLNAEHSMEV 193
                     +E+  +  ET++  +S+  T + AA     N    E WV  ++ ++   V
Sbjct: 129 ----------KEKLPKSMETVLENHSDSYTTDAAAAAAATN---RENWVPEIDDDYFFSV 188

Query: 194 G--------GNLWTDPFVFEDPLSLDNN--PTHVPMDLFEHYEMF 229
                     + WT+P++      +DN+  P    ++L+   E++
Sbjct: 189 DAYTESAVCADFWTEPYL------VDNSYVPPEYDVELWSQNELY 214

[Close]
BLAST of CmaCh20G006530 vs. NCBI nr
Match: gi|702244495|ref|XP_010051469.1| (PREDICTED: myb-related protein Myb4-like [Eucalyptus grandis])

HSP 1 Score: 197.2 bits (500), Expect = 3.1e-47
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           +NG KKG W+ EED KL+AYV+KYG WNWR +PK+AGLSRCGKSCRLRWMNYLRPDIKRG
Sbjct: 9   KNGMKKGTWTPEEDRKLKAYVSKYGFWNWRQLPKYAGLSRCGKSCRLRWMNYLRPDIKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQN--PSNT 129
           N+ KEE+ TI+RLQ  LGN+WSAIA+ LPGRTDNE+KNHWHTNLKK L+QN  PS+T
Sbjct: 69  NYTKEEEDTIVRLQGLLGNKWSAIASQLPGRTDNEVKNHWHTNLKKRLNQNTQPSST 125

[Close]
BLAST of CmaCh20G006530 vs. NCBI nr
Match: gi|970040313|ref|XP_015081535.1| (PREDICTED: myb-related protein Myb4-like [Solanum pennellii])

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 106/229 (46.29%), Postives = 140/229 (61.14%), Query Frame = 1 

Query: 14  ENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYLRPDIKRG 73
           ENGRKKG W+ EED+KL AY+TKYG WNWR +PK+AGL+RCGKSCRLRWMN+LRP++KRG
Sbjct: 9   ENGRKKGTWTPEEDKKLEAYITKYGCWNWRQLPKYAGLARCGKSCRLRWMNHLRPNVKRG 68

Query: 74  NFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLDQNPSNTEVEDA 133
           N+ KEED+ IL L A LGNRWSAIA +LPGR+DNEIKNHWHT+LKK  + N S    + +
Sbjct: 69  NYTKEEDELILNLHAQLGNRWSAIAIHLPGRSDNEIKNHWHTSLKKRANYNSSEGSKKCS 128

Query: 134 AASSCSELRIREEEEELDETL----------IVLNSEMATPELAAKHEGMNFGETETWVV 193
             +S   ++ +   E  +             IVL S   +P+ ++  E  ++   +  V 
Sbjct: 129 NKNSGRNIKRKSSVENQNSISANNNSNMHENIVLESSDWSPKESSSEELSSYQHEQHEVF 188

Query: 194 GLNAEHSMEVGGNLWTDPFVFEDPLSLDNNPTHVPMDLFEHYE-MFPPS 232
            L         GN WT+PF  +   S  N+         ++Y  M PPS
Sbjct: 189 QLKLALEEISNGNFWTEPFEVD---SFINSKIDFVAPSIDYYGLMCPPS 234

The following BLAST results are available for this feature:
BLAST of CmaCh20G006530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB4_ORYSJ3.2e-3970.09Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2[more]
MYB80_ORYSJ1.2e-3866.35Transcription factor MYB80 OS=Oryza sativa subsp. japonica GN=MYB80 PE=2 SV=2[more]
MYB39_ARATH3.0e-3764.55Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1[more]
MYB34_ARATH3.0e-3766.36Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1[more]
MYB3_ARATH1.9e-3645.90Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1[more]
BLAST of CmaCh20G006530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059DFF5_EUCGR2.3e-4947.58Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01766 PE=4 SV=1[more]
A0A151SVG1_CAJCA1.3e-4746.22Myb-related protein Myb4 OS=Cajanus cajan GN=KK1_014179 PE=4 SV=1[more]
A0A059DGA2_EUCGR2.2e-4776.07Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01767 PE=4 SV=1[more]
A0A0D2NGT1_GOSRA1.4e-4648.02Uncharacterized protein OS=Gossypium raimondii GN=B456_002G016800 PE=4 SV=1[more]
K7M2T3_SOYBN1.4e-4647.79Uncharacterized protein OS=Glycine max GN=GLYMA_13G303200 PE=4 SV=1[more]
BLAST of CmaCh20G006530 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G31180.15.2e-4066.96 myb domain protein 14[more]
AT5G16770.16.8e-4066.36 myb domain protein 9[more]
AT1G34670.16.8e-4068.18 myb domain protein 93[more]
AT1G06180.12.6e-3957.14 myb domain protein 13[more]
AT5G15310.12.6e-3967.92 myb domain protein 16[more]
BLAST of CmaCh20G006530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|702254179|ref|XP_010069815.1|3.4e-4947.58PREDICTED: myb-related protein Myb4-like [Eucalyptus grandis][more]
gi|698510945|ref|XP_009800612.1|8.3e-4850.00PREDICTED: myb-related protein Myb4-like [Nicotiana sylvestris][more]
gi|1012347567|gb|KYP58758.1|1.8e-4746.22Myb-related protein Myb4 [Cajanus cajan][more]
gi|702244495|ref|XP_010051469.1|3.1e-4776.07PREDICTED: myb-related protein Myb4-like [Eucalyptus grandis][more]
gi|970040313|ref|XP_015081535.1|5.4e-4746.29PREDICTED: myb-related protein Myb4-like [Solanum pennellii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0010196 nonphotochemical quenching
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0015979 photosynthesis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0003677 DNA binding
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0009496 plastoquinol--plastocyanin reductase activity
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G006530.1CmaCh20G006530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 19..66
score: 6.5E-16coord: 72..116
score: 1.0
IPR001005SANT/Myb domainSMARTSM00717santcoord: 71..119
score: 4.0E-15coord: 18..68
score: 9.4
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 20..73
score: 8.3E-25coord: 74..119
score: 1.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 16..113
score: 6.25
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 71..121
score: 20.611coord: 14..70
score: 25
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 14..123
score: 1.2E-79coord: 140..154
score: 1.2
NoneNo IPR availablePANTHERPTHR10641:SF541SUBFAMILY NOT NAMEDcoord: 14..123
score: 1.2E-79coord: 140..154
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G006530CmoCh19G009840Cucurbita moschata (Rifu)cmacmoB547
CmaCh20G006530CmoCh20G005930Cucurbita moschata (Rifu)cmacmoB552
CmaCh20G006530Lsi11G015030Bottle gourd (USVL1VR-Ls)cmalsiB513
CmaCh20G006530Cp4.1LG16g04710Cucurbita pepo (Zucchini)cmacpeB562
CmaCh20G006530MELO3C028590.2Melon (DHL92) v3.6.1cmamedB590
CmaCh20G006530CsaV3_7G004040Cucumber (Chinese Long) v3cmacucB0684
CmaCh20G006530Cla97C02G027860Watermelon (97103) v2cmawmbB582
CmaCh20G006530Carg03158Silver-seed gourdcarcmaB0472
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh20G006530CmaCh11G018510Cucurbita maxima (Rimu)cmacmaB157
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G006530Cucurbita moschata (Rifu)cmacmoB540
CmaCh20G006530Cucurbita moschata (Rifu)cmacmoB561
CmaCh20G006530Watermelon (Charleston Gray)cmawcgB487
CmaCh20G006530Watermelon (Charleston Gray)cmawcgB494
CmaCh20G006530Watermelon (97103) v1cmawmB525
CmaCh20G006530Watermelon (97103) v1cmawmB528
CmaCh20G006530Cucurbita pepo (Zucchini)cmacpeB574
CmaCh20G006530Cucurbita pepo (Zucchini)cmacpeB578
CmaCh20G006530Bottle gourd (USVL1VR-Ls)cmalsiB505
CmaCh20G006530Melon (DHL92) v3.6.1cmamedB586
CmaCh20G006530Silver-seed gourdcarcmaB0041
CmaCh20G006530Silver-seed gourdcarcmaB1215
CmaCh20G006530Watermelon (97103) v2cmawmbB574
CmaCh20G006530Wax gourdcmawgoB0681
CmaCh20G006530Cucurbita maxima (Rimu)cmacmaB443
CmaCh20G006530Cucurbita maxima (Rimu)cmacmaB477