CmaCh02G001350 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCGATCACCGATTGTTGATAAGGATGGAGTCAAGAGAGGTGCTTGGAGTTCTGAAGAAGATGATAAGCTCATGGGTTATGTTCAGAAACATGGCCCTCGGAAATGGCGGCAGGTTCCCTGCGTTCCAGGTACGTTTATAAATCGAACCACGGTTCTCCCTAATGACATTGTTAAGAATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAATGCAAATATCTAATATTTGCCTTATTATCATAGGTATTTTTCCATTTATTATTATTTCCATATATAATGCAAATATCTAATATTTGCCTTATTATCATAGGTATTTTTCCATTTATTATTATTTCCATATCCTTGTAATTAATTTGATTATAAATAAATTATCATAGGTATTTTTCCATTTATTATTATTTCCATATCCTTGTAATTAATTTGATTATAAATAACATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACATGGTATCAGAGCCCTCTCAGTTTAACAACCCAATCCTTTCTTTTCAATGGCTTTTGAATCCTCTAATCTTCTTCTCCACCACTCCTGCTGGTTTTGACGCCGCAGGGGCAGTCTTCATGGCTGCTGCAGGCGGAGCCGATTGATTACTCTTCAGCTCCACCCTATTGACCTCCAAATCACCTTTCGTCATACTCTGTACATACAACCTCACCTTTTCCAACCCAATCGGTTTTCCCCTTGGCCAATATAGTCTCTCTCATTTTCTTCCCAATCAACCTTCATCCTTCACATAAACCCTAACCTAAACCTATCAACCTTTTGCAGAGATTTACCTTCGGAATCTGGGTGCCGCACTGGCCTATNGCGACAATCCCTCTTCATGGGTTAGACATATTCTCGCCGAAGCCAAGGCAGCATCGCCGCTGAGCGGCGATCCCTCTGCAATTTTTGATGGCCAAGAACCGGGTTGTTAGCATCTTCAAGAAAAGTGTTTCTCAACCTCTTTGAATTTTTCAGATTCAAGCTTCACGTTCGTTTAAATCCGACGCTTAGCTTGCGGTGGGGTGTTAAGAATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAATGCAAATATCTAATATTTGCCTTATTATCATAGGTATTTTTTCCATTTATTATTATTTCCATATCCTTGTAATTAATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACAGACATGATATTGTCCACTTTGAGCATGAGCTATCGTAACTTTACTTTTAGTTTTCTCAAAAGACCTCGTACTAATGAAGAGGTATTCCTTTGACATGACTAAGCTCAGGGAATGAAGAAGTACTTCTAATACCACCGGTACCATATATTGTCTTTTAGTTTTCTCGTAACTTTACTTTCGAAACCCACAACTTTTTTGTTCGATATTTAAGAATTCTATTGACATGACTAAGCTCAGGGCATGATTCTAATACCATGTTAGGAGCCACAACTCTCTACAATGGTATGATATTGTCCACGATGAGCATAAACTCTCATAACTTTGCTTTTAATTAGTCAATATGGTATGAAATTCTGACCTGGGTTTGGGCAATTACACAGGGTTGGCAAGATGCGGCAAGAGTTGTAGACTGCGTTGGTTGAACTATCTCCGCCCCGGTCTCAAGAAAGGAAACTACACAGATGAAGAGAATGACTTAATCTGCAAATTGCATGAAATGCATGGCAATAGGTAGCTCTAAATGCCATATCTCTCTCGCTCCCAACTCTCAACTTTTTAATCAGAGTTGTAATGTCTCGCATTGTGTTTTAGATGGTCAATGATTGCGACGAAACTACCTGAAAGAACGGACAATGAAATAAAGAATCATTGGAACACTCACCTAAAAAAACTAAAGAAACAAGTAGAGCGTATATCAGAACCATCAACTCAGCCAAAACCGAAGAAATTAAGGCCCAACATAGCGTCTGATTTGGAAGCAAAAACAGAAGAGTTTACGGGGTATTGCTCCACCAAATTTGGGATTGTAGAGAGCTCTTCATTGTCGCTACAAACGTCTTCGACTTCCAGTGATGCCAATTTTGGGAGGCTGAATTGGGCGGTGGAAGAATATGATCAGAGCGGCTATGGAGATCTGTGGAATGAACCATTTATTTGGGATGGAGACGATGTGAGCTATGTTCTTGATGGCTCCATGCAGTTCTCACCAGACAATGGAATGTTTTCTCCTCAAGTGCATGAGACAACCTACGACGATTACATAGATTTGTTCTGCTCTTTGCTGTAA ATGGTGCGATCACCGATTGTTGATAAGGATGGAGTCAAGAGAGGTGCTTGGAGTTCTGAAGAAGATGATAAGCTCATGGGTTATGTTCAGAAACATGGCCCTCGGAAATGGCGGCAGAGTTGTAGACTGCGTTGGTTGAACTATCTCCGCCCCGGTCTCAAGAAAGGAAACTACACAGATGAAGAGAATGACTTAATCTGCAAATTGCATGAAATGCATGGCAATAGATGGTCAATGATTGCGACGAAACTACCTGAAAGAACGGACAATGAAATAAAGAATCATTGGAACACTCACCTAAAAAAACTAAAGAAACAAGTAGAGCGTATATCAGAACCATCAACTCAGCCAAAACCGAAGAAATTAAGGCCCAACATAGCGTCTGATTTGGAAGCAAAAACAGAAGAGTTTACGGGGTATTGCTCCACCAAATTTGGGATTGTAGAGAGCTCTTCATTGTCGCTACAAACGTCTTCGACTTCCAGTGATGCCAATTTTGGGAGGCTGAATTGGGCGGTGGAAGAATATGATCAGAGCGGCTATGGAGATCTGTGGAATGAACCATTTATTTGGGATGGAGACGATGTGAGCTATGTTCTTGATGGCTCCATGCAGTTCTCACCAGACAATGGAATGTTTTCTCCTCAAGTGCATGAGACAACCTACGACGATTACATAGATTTGTTCTGCTCTTTGCTGTAA ATGGTGCGATCACCGATTGTTGATAAGGATGGAGTCAAGAGAGGTGCTTGGAGTTCTGAAGAAGATGATAAGCTCATGGGTTATGTTCAGAAACATGGCCCTCGGAAATGGCGGCAGAGTTGTAGACTGCGTTGGTTGAACTATCTCCGCCCCGGTCTCAAGAAAGGAAACTACACAGATGAAGAGAATGACTTAATCTGCAAATTGCATGAAATGCATGGCAATAGATGGTCAATGATTGCGACGAAACTACCTGAAAGAACGGACAATGAAATAAAGAATCATTGGAACACTCACCTAAAAAAACTAAAGAAACAAGTAGAGCGTATATCAGAACCATCAACTCAGCCAAAACCGAAGAAATTAAGGCCCAACATAGCGTCTGATTTGGAAGCAAAAACAGAAGAGTTTACGGGGTATTGCTCCACCAAATTTGGGATTGTAGAGAGCTCTTCATTGTCGCTACAAACGTCTTCGACTTCCAGTGATGCCAATTTTGGGAGGCTGAATTGGGCGGTGGAAGAATATGATCAGAGCGGCTATGGAGATCTGTGGAATGAACCATTTATTTGGGATGGAGACGATGTGAGCTATGTTCTTGATGGCTCCATGCAGTTCTCACCAGACAATGGAATGTTTTCTCCTCAAGTGCATGAGACAACCTACGACGATTACATAGATTTGTTCTGCTCTTTGCTGTAA MVRSPIVDKDGVKRGAWSSEEDDKLMGYVQKHGPRKWRQSCRLRWLNYLRPGLKKGNYTDEENDLICKLHEMHGNRWSMIATKLPERTDNEIKNHWNTHLKKLKKQVERISEPSTQPKPKKLRPNIASDLEAKTEEFTGYCSTKFGIVESSSLSLQTSSTSSDANFGRLNWAVEEYDQSGYGDLWNEPFIWDGDDVSYVLDGSMQFSPDNGMFSPQVHETTYDDYIDLFCSLL
BLAST of CmaCh02G001350 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34 Identity = 73/148 (49.32%), Postives = 100/148 (67.57%), Query Frame = 1
BLAST of CmaCh02G001350 vs. Swiss-Prot
Match: MY122_ARATH (Transcription factor MYB122 OS=Arabidopsis thaliana GN=MYB122 PE=1 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33 Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1
BLAST of CmaCh02G001350 vs. Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32 Identity = 69/150 (46.00%), Postives = 98/150 (65.33%), Query Frame = 1
BLAST of CmaCh02G001350 vs. Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 8.4e-32 Identity = 65/127 (51.18%), Postives = 90/127 (70.87%), Query Frame = 1
BLAST of CmaCh02G001350 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31 Identity = 65/127 (51.18%), Postives = 87/127 (68.50%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TrEMBL
Match: A0A0A0KAD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121970 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.9e-63 Identity = 145/255 (56.86%), Postives = 178/255 (69.80%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TrEMBL
Match: A0A067JXL7_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_26464 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 6.9e-41 Identity = 107/263 (40.68%), Postives = 148/263 (56.27%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TrEMBL
Match: M5XF33_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025095mg PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.5e-40 Identity = 97/206 (47.09%), Postives = 128/206 (62.14%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TrEMBL
Match: V4W3W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017677mg PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 8.4e-39 Identity = 97/245 (39.59%), Postives = 136/245 (55.51%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TrEMBL
Match: A0A067EY03_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042846mg PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38 Identity = 97/245 (39.59%), Postives = 134/245 (54.69%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TAIR10
Match: AT4G34990.1 (AT4G34990.1 myb domain protein 32) HSP 1 Score: 147.9 bits (372), Expect = 7.8e-36 Identity = 73/148 (49.32%), Postives = 100/148 (67.57%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TAIR10
Match: AT1G74080.1 (AT1G74080.1 myb domain protein 122) HSP 1 Score: 144.8 bits (364), Expect = 6.6e-35 Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TAIR10
Match: AT1G35515.1 (AT1G35515.1 high response to osmotic stress 10) HSP 1 Score: 141.0 bits (354), Expect = 9.5e-34 Identity = 74/177 (41.81%), Postives = 103/177 (58.19%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TAIR10
Match: AT5G16770.1 (AT5G16770.1 myb domain protein 9) HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33 Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 1
BLAST of CmaCh02G001350 vs. TAIR10
Match: AT4G28110.1 (AT4G28110.1 myb domain protein 41) HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33 Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = 1
BLAST of CmaCh02G001350 vs. NCBI nr
Match: gi|659094749|ref|XP_008448223.1| (PREDICTED: transcription repressor MYB6-like [Cucumis melo]) HSP 1 Score: 251.1 bits (640), Expect = 1.8e-63 Identity = 142/254 (55.91%), Postives = 172/254 (67.72%), Query Frame = 1
BLAST of CmaCh02G001350 vs. NCBI nr
Match: gi|778712704|ref|XP_004140052.2| (PREDICTED: transcription repressor MYB6-like [Cucumis sativus]) HSP 1 Score: 250.0 bits (637), Expect = 4.1e-63 Identity = 145/255 (56.86%), Postives = 178/255 (69.80%), Query Frame = 1
BLAST of CmaCh02G001350 vs. NCBI nr
Match: gi|802749940|ref|XP_012087685.1| (PREDICTED: myb-related protein Myb4-like [Jatropha curcas]) HSP 1 Score: 175.6 bits (444), Expect = 9.9e-41 Identity = 107/263 (40.68%), Postives = 148/263 (56.27%), Query Frame = 1
BLAST of CmaCh02G001350 vs. NCBI nr
Match: gi|595953222|ref|XP_007216491.1| (hypothetical protein PRUPE_ppa025095mg, partial [Prunus persica]) HSP 1 Score: 172.9 bits (437), Expect = 6.4e-40 Identity = 97/206 (47.09%), Postives = 128/206 (62.14%), Query Frame = 1
BLAST of CmaCh02G001350 vs. NCBI nr
Match: gi|645248212|ref|XP_008230194.1| (PREDICTED: myb-related protein Myb4-like [Prunus mume]) HSP 1 Score: 169.5 bits (428), Expect = 7.1e-39 Identity = 95/206 (46.12%), Postives = 125/206 (60.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |