CmoCh19G006930 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G006930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Dehydrin protein
Location	Cmo_Chr19 : 7319650 .. 7321257 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGATGAGAATGGCGAAAATGGCTGATATACAGGACGAGTATGGCAACCCCATCCAACTCAACGACGAGCATGGCAACCCGGTTGTGTTGACTGATGAACATGGCAACCCCGTGAGGCTCTCTGGCATTGCAACCAAGGTCGGCACGACACTCGGGTCGCTGATCTTTGGCAGTGGTGATGAGGATGGTGGTGGCCATGGCAGTGCTTGTGATGCTGAAGGTAGTTCAGGTGGTGGCAATGGCGACGGCGAGCAGGAGCTGATGCCGGTCGTGGAGCATGAAGATGGCGGCTCAGGTACACATGTTGGCTCGGCCACTTCAGGCTCTAGTCCGGTGAGTCCAAGTTTTTGAATTATAATTAGCAGTTGGACTTTCGTATTCTCGCTCAGACTCTCGAGATTTTCATTCTGTTCTGGCGTCGCTTAATCATTTTCTCTACAAAGTACACTATAAGGCCTAACCTCTTTGAGGCCTATGGAGTCCTCGAATAGTCTCTCTTAATTGAGACTCGATACCTTTTTTGGAGTCCTTGAGCAAAGGGTCTTTATTCGACACTTGAGGATTCTATTGACATGATTAAATCAAAGGCATGACTTTGATATTAAGTTACAAACGACGACTCTCTACAATAGTATAATATTGTCTATTTTGAGCATAAGCTTTCAGGGCTTTACTTTGGATTTCTCTATGACCCTCGTACCAATGAACATACATTTTTTACCATTTATGATCATCTTTAATCGAAAGACGTGTCGATTTTATTTAATCCATTTTTTTTCTAAAGAAATGCAATTACAATTTTTAAAACAATATTAATAAAATAAAATTATGGTATTCAAAATGAACTTTTTGACGTATCCAACTTGGTACAGATGGTTCGATGCTGAACGAGCGCGTATTACGTTATTAATCAAATTGAGGAATTAAATGGGTTACAATTTAATTGTAATATCCATTATGTTAATCCTAATTTAAGTTTGTAATAAATTAGATAATTAAATATCATTCATAGGATTAATTTATTTCCATTTCCAGTCTGAGGAAGAAGAACAAAGTGAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAAGGACTGAATCAAAAGATAAAAGAGAAGCTAACAGGAGGGAAGCATAGAGAGGAGCAACCTCAAGCTTCTTCCCCTCCGACCACCACCGCAACTACAACCGCCTCTCCGATCACCACAAACAAAATTCACTATGGGGAACCCGCTCATAATATTCTCTGAATTGCTTTTGGTTCGTGTACTTGAAGACCTGACTGTATTTTCAAAGATTTTGATTGTATTTTCAAAGATTTTGATTCGGTTTCAAAGTTGGTAGATCATATTTTAGTTCGTGGACTTTTCATCCATGAGGTAAATTGATATTTTTATTAAACCGAAAAAAAAAATGATAGAATATAAGAGAAAGTAATTTTTTATAAAACTGAGATTGGTTGTGAAATTTAAGGGTGTAGAAACTTATTCTATCCGTCTTAAAATATGAGGCAAAACAGATAATATCTACTAGTGGTGTGTTTGAATTATTACAAATGATATGTTTGAACCAGATATCGAGCGGTGTATCAGCGAGAATGCTGG

mRNA sequence

ATGGAAGGGATGAGAATGGCGAAAATGGCTGATATACAGGACGAGTATGGCAACCCCATCCAACTCAACGACGAGCATGGCAACCCGGTTGTGTTGACTGATGAACATGGCAACCCCGTGAGGCTCTCTGGCATTGCAACCAAGGTCGGCACGACACTCGGGTCGCTGATCTTTGGCAGTGGTGATGAGGATGGTGGTGGCCATGGCAGTGCTTGTGATGCTGAAGGTAGTTCAGGTGGTGGCAATGGCGACGGCGAGCAGGAGCTGATGCCGGTCGTGGAGCATGAAGATGGCGGCTCAGGTACACATGTTGGCTCGGCCACTTCAGGCTCTAGTCCGTCTGAGGAAGAAGAACAAAGTGAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAAGGACTGAATCAAAAGATAAAAGAGAAGCTAACAGGAGGGAAGCATAGAGAGGAGCAACCTCAAGCTTCTTCCCCTCCGACCACCACCGCAACTACAACCGCCTCTCCGATCACCACAAACAAAATTCACTATGGGGAACCCGCTCATAATATTCTCTGAATTGCTTTTGGTTCGTGTACTTGAAGACCTGACTGTATTTTCAAAGATTTTGATTGTATTTTCAAAGATTTTGATTCGGTTTCAAAGTTGGTAGATCATATTTTAGTTCGTGGACTTTTCATCCATGAGGTAAATTGATATTTTTATTAAACCGAAAAAAAAAATGATAGAATATAAGAGAAAGTAATTTTTTATAAAACTGAGATTGGTTGTGAAATTTAAGGGTGTAGAAACTTATTCTATCCGTCTTAAAATATGAGGCAAAACAGATAATATCTACTAGTGGTGTGTTTGAATTATTACAAATGATATGTTTGAACCAGATATCGAGCGGTGTATCAGCGAGAATGCTGG

Coding sequence (CDS)

ATGGAAGGGATGAGAATGGCGAAAATGGCTGATATACAGGACGAGTATGGCAACCCCATCCAACTCAACGACGAGCATGGCAACCCGGTTGTGTTGACTGATGAACATGGCAACCCCGTGAGGCTCTCTGGCATTGCAACCAAGGTCGGCACGACACTCGGGTCGCTGATCTTTGGCAGTGGTGATGAGGATGGTGGTGGCCATGGCAGTGCTTGTGATGCTGAAGGTAGTTCAGGTGGTGGCAATGGCGACGGCGAGCAGGAGCTGATGCCGGTCGTGGAGCATGAAGATGGCGGCTCAGGTACACATGTTGGCTCGGCCACTTCAGGCTCTAGTCCGTCTGAGGAAGAAGAACAAAGTGAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAAGGACTGAATCAAAAGATAAAAGAGAAGCTAACAGGAGGGAAGCATAGAGAGGAGCAACCTCAAGCTTCTTCCCCTCCGACCACCACCGCAACTACAACCGCCTCTCCGATCACCACAAACAAAATTCACTATGGGGAACCCGCTCATAATATTCTCTGA

Homology

[Close]

BLAST of CmoCh19G006930 vs. Swiss-Prot
Match: ECP40_DAUCA (Embryogenic cell protein 40 OS=Daucus carota GN=ECP40 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.9e-11
Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGH 68
           MAD++DE GNPIQL D+HGNPV LTDE+GNPV ++G+AT   TT        G  D G  
Sbjct: 1   MADLRDEKGNPIQLTDQHGNPVQLTDEYGNPVHITGVATTGATT--------GHHDHGVG 60

Query: 69  GSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPS 115
           G++    GS+G G   G   L           G+H G+ T G  P+
Sbjct: 61  GASHGGVGSTGLGGVAGAAGLAGATAAAATHGGSHGGTGTHGVGPT 98

[Close]

BLAST of CmoCh19G006930 vs. Swiss-Prot
Match: DHLE_RAPSA (Late embryogenesis abundant protein OS=Raphanus sativus PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-10
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKV----GTTLGSLIFGSGDED 68
           MAD++DE GNPI L D +GNPV L+DE GNP+ ++G+A+       +  G++     +  
Sbjct: 1   MADLKDERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQYKDSVTGNIAEYPTEAP 60

Query: 69  GGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHV-GSATSGSSPSEEEEQSEKR 128
             G  +   A  ++  G    E       +   G  G H+  S +S SS SE++ Q  +R
Sbjct: 61  PAGVAAGTGAAATTAAGVTTSE---TTTGQEHHGSLGEHLRRSGSSSSSSSEDDGQGGRR 120

Query: 129 KKKKKKKKGLNQKIKEKLTGGKHREEQPQASSP---PTTTATTTAS 167
                 KK +  KIK+KL GGKH++EQ   ++    PTTT TTT +
Sbjct: 121 ------KKSIKDKIKDKLGGGKHKDEQTPTTATTTGPTTTTTTTGA 157

[Close]

BLAST of CmoCh19G006930 vs. Swiss-Prot
Match: DHLEA_ARATH (Probable dehydrin LEA OS=Arabidopsis thaliana GN=LEA PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-09
Identity = 67/184 (36.41%), Postives = 91/184 (49.46%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVV-LTDEHGNPVRLSGIATKVG---------------TT 68
           MAD++DE GNPI L D  GNP+V LTDEHGNP+ L+G+ +                  +T
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 69  LGSLIFGSGDEDGGGHGSACDAEGSSGGGNGD--GEQELMPVVEHEDGGSGTHVGSATSG 128
           +G     +    G G  +A  A G S G      G+Q    + EH          S +S 
Sbjct: 61  VGET-HPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRR-------SGSSS 120

Query: 129 SSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITT 175
           SS SE++ Q        ++KK + +KIKEK   GKH++EQ  A      TATTT  P TT
Sbjct: 121 SSSSEDDGQGG------RRKKSIKEKIKEKFGSGKHKDEQTPA------TATTT-GPATT 163

[Close]

BLAST of CmoCh19G006930 vs. TrEMBL
Match: V9M5C3_MANES (Dehydrin protein OS=Manihot esculenta GN=LTI30 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDG--- 68
           MAD++DEYGNPIQL DEHGNPV LTDEHGNPV ++G+AT    TLG+L+       G   
Sbjct: 1   MADLRDEYGNPIQLTDEHGNPVELTDEHGNPVHITGVATSKPPTLGTLMENEVPATGLLA 60

Query: 69  GGHGSACDAEGSSGGGNGDGEQELMPVVE-HEDGGSGTHVGSATSGSSPSEEEEQSEKRK 128
             +G+   ++G +G      ++E  P  +  E  GSG    S+TS SS SE++ Q  +RK
Sbjct: 61  SSNGTDHTSKGHAGDEENHRKEEPQPQPQPQEQQGSGEIERSSTSSSSSSEDDGQGGRRK 120

Query: 129 KKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTT 161
           KK     GL +KIKEKLTGGKH+EEQ   +S  T T
Sbjct: 121 KK-----GLREKIKEKLTGGKHKEEQRHKASVSTET 151

[Close]

BLAST of CmoCh19G006930 vs. TrEMBL
Match: G4XR61_9ROSI (Dehydrin 4 OS=Vitis yeshanensis PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.3e-17
Identity = 79/190 (41.58%), Postives = 101/190 (53.16%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIAT--KVGTTLGSLI--------- 68
           MAD++DE+GNPIQL D+HGNPV LTDEHGNP+ L+G+A+   + TT  + +         
Sbjct: 1   MADLRDEHGNPIQLTDQHGNPVQLTDEHGNPMHLTGVASTHPITTTTAAPVHDADALKTT 60

Query: 69  -------FGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSG 128
                  FG G  D   HG A  A   + GG G        VV HE   S       +S 
Sbjct: 61  GESHPPTFGHGTADQAMHGGAPVAAEPAEGGGG--------VVHHEKRES-------SSS 120

Query: 129 SSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQ---PQASSPPTTTATTTASP 178
           SS SE++ Q  +R      KKGL +KIKEKLTGGKH+EEQ   P      TTT TT ++ 
Sbjct: 121 SSSSEDDGQGGRR------KKGLKEKIKEKLTGGKHKEEQGHAPTTGVAITTTTTTGSAT 169

[Close]

BLAST of CmoCh19G006930 vs. TrEMBL
Match: A0A0D2VZT1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G154800 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 76/166 (45.78%), Postives = 99/166 (59.64%), Query Frame = 1


Query: 4   MRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDE 63
           +R+ KMAD++DE+GNPIQL DEHGNPV LTDEHGNP+ ++GIATK  TT  SL   SG  
Sbjct: 15  LRIRKMADLRDEHGNPIQLTDEHGNPVQLTDEHGNPIYVTGIATKHPTTTTSL---SGLM 74

Query: 64  DGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKR 123
            G G GSA   + S         Q+  P+     G       S++S SS S E++    R
Sbjct: 75  -GYGTGSAVATDQSQQQLQPPPPQQTQPLHYEVSGKEKIQRSSSSSSSSSSSEDDGMGGR 134

Query: 124 KKKKKKKKGLNQKIKEKLTGGKHREE---QPQASSPPTTTATTTAS 167
           +K     KGL +K+KEKLT GK +EE   Q + S+  TT +TTT +
Sbjct: 135 RK-----KGLKEKVKEKLTSGKKKEEDQSQTKTSAVKTTASTTTTT 171

[Close]

BLAST of CmoCh19G006930 vs. TrEMBL
Match: B9RH90_RICCO (Late embryogenesis abundant protein, putative OS=Ricinus communis GN=RCOM_1448770 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-16
Identity = 76/177 (42.94%), Postives = 97/177 (54.80%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATK----VGTTL-------GSLI 68
           MADI+DE+GNP+QL DEHGNPV LTDE G PV L+G AT       TT+         L+
Sbjct: 1   MADIRDEFGNPVQLTDEHGNPVQLTDEQGKPVHLTGFATTEPPIASTTVVQSEVPPTGLL 60

Query: 69  FGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPSEEE 128
             SG E+     +     G  G     G+++     E  D GS     S++S SS SE++
Sbjct: 61  ASSGKEEVTESRTTAPIAGEHGAA---GDEDKYKKEEKMDEGSKDVQRSSSSSSSSSEDD 120

Query: 129 EQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIH 175
            Q  +RKKK     GL +KIKEKLTGGKH+EE  Q  S  TT  TT  +P   ++ H
Sbjct: 121 GQGGRRKKK-----GLKEKIKEKLTGGKHKEEHGQTESVSTT--TTATAPAEAHQAH 167

[Close]

BLAST of CmoCh19G006930 vs. TrEMBL
Match: E7BXD8_JATCU (Dehydrin OS=Jatropha curcas GN=DHN-1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGH 68
           MAD++DEYGNPI+L DEHGNPV LTDEHGNPV ++G+AT    T+ +++     + G   
Sbjct: 1   MADLRDEYGNPIRLTDEHGNPVELTDEHGNPVHITGLATSKPATIANVLQIDVPDTGLLA 60

Query: 69  GSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKK 128
            +    +G +G   G  E E +   + +         S++S SS SE++EQ  +RKKK  
Sbjct: 61  STEEPPKGHTGEHVGGAEPEPVKAEQPQQQQQELERSSSSSSSS-SEDDEQGGRRKKK-- 120

Query: 129 KKKGLNQKIKEKLTGGKHREEQPQASSPPTT 160
              GL +KIKEKLTGGKH+EE  Q +   TT
Sbjct: 121 ---GLKEKIKEKLTGGKHKEEHKQTAITETT 145

[Close]

BLAST of CmoCh19G006930 vs. TAIR10
Match: AT2G21490.1 (AT2G21490.1 dehydrin LEA)

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 67/184 (36.41%), Postives = 91/184 (49.46%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVV-LTDEHGNPVRLSGIATKVG---------------TT 68
           MAD++DE GNPI L D  GNP+V LTDEHGNP+ L+G+ +                  +T
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 69  LGSLIFGSGDEDGGGHGSACDAEGSSGGGNGD--GEQELMPVVEHEDGGSGTHVGSATSG 128
           +G     +    G G  +A  A G S G      G+Q    + EH          S +S 
Sbjct: 61  VGET-HPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRR-------SGSSS 120

Query: 129 SSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITT 175
           SS SE++ Q        ++KK + +KIKEK   GKH++EQ  A      TATTT  P TT
Sbjct: 121 SSSSEDDGQGG------RRKKSIKEKIKEKFGSGKHKDEQTPA------TATTT-GPATT 163

[Close]

BLAST of CmoCh19G006930 vs. TAIR10
Match: AT4G39130.1 (AT4G39130.1 Dehydrin family protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 1


Query: 9  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKV 50
          MAD++DE GNPI L D HG P  L DE GN + L+G+AT V
Sbjct: 1  MADLKDERGNPIYLTDAHGEPAQLMDEFGNAMHLTGVATTV 41

[Close]

BLAST of CmoCh19G006930 vs. NCBI nr
Match: gi|442022395|gb|AGC51773.1| (dehydrin protein [Manihot esculenta])

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDG--- 68
           MAD++DEYGNPIQL DEHGNPV LTDEHGNPV ++G+AT    TLG+L+       G   
Sbjct: 1   MADLRDEYGNPIQLTDEHGNPVELTDEHGNPVHITGVATSKPPTLGTLMENEVPATGLLA 60

Query: 69  GGHGSACDAEGSSGGGNGDGEQELMPVVE-HEDGGSGTHVGSATSGSSPSEEEEQSEKRK 128
             +G+   ++G +G      ++E  P  +  E  GSG    S+TS SS SE++ Q  +RK
Sbjct: 61  SSNGTDHTSKGHAGDEENHRKEEPQPQPQPQEQQGSGEIERSSTSSSSSSEDDGQGGRRK 120

Query: 129 KKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTT 161
           KK     GL +KIKEKLTGGKH+EEQ   +S  T T
Sbjct: 121 KK-----GLREKIKEKLTGGKHKEEQRHKASVSTET 151

[Close]

BLAST of CmoCh19G006930 vs. NCBI nr
Match: gi|349844874|gb|AEQ19906.1| (dehydrin 4 [Vitis yeshanensis])

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 79/190 (41.58%), Postives = 101/190 (53.16%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIAT--KVGTTLGSLI--------- 68
           MAD++DE+GNPIQL D+HGNPV LTDEHGNP+ L+G+A+   + TT  + +         
Sbjct: 1   MADLRDEHGNPIQLTDQHGNPVQLTDEHGNPMHLTGVASTHPITTTTAAPVHDADALKTT 60

Query: 69  -------FGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSG 128
                  FG G  D   HG A  A   + GG G        VV HE   S       +S 
Sbjct: 61  GESHPPTFGHGTADQAMHGGAPVAAEPAEGGGG--------VVHHEKRES-------SSS 120

Query: 129 SSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQ---PQASSPPTTTATTTASP 178
           SS SE++ Q  +R      KKGL +KIKEKLTGGKH+EEQ   P      TTT TT ++ 
Sbjct: 121 SSSSEDDGQGGRR------KKGLKEKIKEKLTGGKHKEEQGHAPTTGVAITTTTTTGSAT 169

[Close]

BLAST of CmoCh19G006930 vs. NCBI nr
Match: gi|763810848|gb|KJB77750.1| (hypothetical protein B456_012G154800 [Gossypium raimondii])

HSP 1 Score: 94.4 bits (233), Expect = 2.3e-16
Identity = 76/166 (45.78%), Postives = 99/166 (59.64%), Query Frame = 1


Query: 4   MRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDE 63
           +R+ KMAD++DE+GNPIQL DEHGNPV LTDEHGNP+ ++GIATK  TT  SL   SG  
Sbjct: 15  LRIRKMADLRDEHGNPIQLTDEHGNPVQLTDEHGNPIYVTGIATKHPTTTTSL---SGLM 74

Query: 64  DGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKR 123
            G G GSA   + S         Q+  P+     G       S++S SS S E++    R
Sbjct: 75  -GYGTGSAVATDQSQQQLQPPPPQQTQPLHYEVSGKEKIQRSSSSSSSSSSSEDDGMGGR 134

Query: 124 KKKKKKKKGLNQKIKEKLTGGKHREE---QPQASSPPTTTATTTAS 167
           +K     KGL +K+KEKLT GK +EE   Q + S+  TT +TTT +
Sbjct: 135 RK-----KGLKEKVKEKLTSGKKKEEDQSQTKTSAVKTTASTTTTT 171

[Close]

BLAST of CmoCh19G006930 vs. NCBI nr
Match: gi|255543773|ref|XP_002512949.1| (PREDICTED: embryogenic cell protein 40 [Ricinus communis])

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 76/177 (42.94%), Postives = 97/177 (54.80%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATK----VGTTL-------GSLI 68
           MADI+DE+GNP+QL DEHGNPV LTDE G PV L+G AT       TT+         L+
Sbjct: 1   MADIRDEFGNPVQLTDEHGNPVQLTDEQGKPVHLTGFATTEPPIASTTVVQSEVPPTGLL 60

Query: 69  FGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPSEEE 128
             SG E+     +     G  G     G+++     E  D GS     S++S SS SE++
Sbjct: 61  ASSGKEEVTESRTTAPIAGEHGAA---GDEDKYKKEEKMDEGSKDVQRSSSSSSSSSEDD 120

Query: 129 EQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIH 175
            Q  +RKKK     GL +KIKEKLTGGKH+EE  Q  S  TT  TT  +P   ++ H
Sbjct: 121 GQGGRRKKK-----GLKEKIKEKLTGGKHKEEHGQTESVSTT--TTATAPAEAHQAH 167

[Close]

BLAST of CmoCh19G006930 vs. NCBI nr
Match: gi|821324906|ref|NP_001295705.1| (embryogenic cell protein 40-like [Jatropha curcas])

HSP 1 Score: 93.6 bits (231), Expect = 3.9e-16
Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 9   MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGH 68
           MAD++DEYGNPI+L DEHGNPV LTDEHGNPV ++G+AT    T+ +++     + G   
Sbjct: 1   MADLRDEYGNPIRLTDEHGNPVELTDEHGNPVHITGLATSKPATIANVLQIDVPDTGLLA 60

Query: 69  GSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKK 128
            +    +G +G   G  E E +   + +         S++S SS SE++EQ  +RKKK  
Sbjct: 61  STEEPPKGHTGEHVGGAEPEPVKAEQPQQQQQELERSSSSSSSS-SEDDEQGGRRKKK-- 120

Query: 129 KKKGLNQKIKEKLTGGKHREEQPQASSPPTT 160
              GL +KIKEKLTGGKH+EE  Q +   TT
Sbjct: 121 ---GLKEKIKEKLTGGKHKEEHKQTAITETT 145

The following BLAST results are available for this feature:

BLAST of CmoCh19G006930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ECP40_DAUCA	4.9e-11	43.40	Embryogenic cell protein 40 OS=Daucus carota GN=ECP40 PE=1 SV=1	[more]
DHLE_RAPSA	2.4e-10	35.54	Late embryogenesis abundant protein OS=Raphanus sativus PE=2 SV=1	[more]
DHLEA_ARATH	6.0e-09	36.41	Probable dehydrin LEA OS=Arabidopsis thaliana GN=LEA PE=2 SV=1	[more]

BLAST of CmoCh19G006930 vs. TrEMBL


Match Name	E-value	Identity	Description
V9M5C3_MANES	1.1e-20	48.72	Dehydrin protein OS=Manihot esculenta GN=LTI30 PE=2 SV=1	[more]
G4XR61_9ROSI	9.3e-17	41.58	Dehydrin 4 OS=Vitis yeshanensis PE=2 SV=1	[more]
A0A0D2VZT1_GOSRA	1.6e-16	45.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G154800 PE=3 SV=1	[more]
B9RH90_RICCO	2.1e-16	42.94	Late embryogenesis abundant protein, putative OS=Ricinus communis GN=RCOM_144877...	[more]
E7BXD8_JATCU	2.7e-16	44.37	Dehydrin OS=Jatropha curcas GN=DHN-1 PE=2 SV=1	[more]

BLAST of CmoCh19G006930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21490.1	3.4e-10	36.41	dehydrin LEA	[more]
AT4G39130.1	1.2e-07	58.54	Dehydrin family protein	[more]

BLAST of CmoCh19G006930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|442022395\|gb\|AGC51773.1\|	1.5e-20	48.72	dehydrin protein [Manihot esculenta]	[more]
gi\|349844874\|gb\|AEQ19906.1\|	1.3e-16	41.58	dehydrin 4 [Vitis yeshanensis]	[more]
gi\|763810848\|gb\|KJB77750.1\|	2.3e-16	45.78	hypothetical protein B456_012G154800 [Gossypium raimondii]	[more]
gi\|255543773\|ref\|XP_002512949.1\|	3.0e-16	42.94	PREDICTED: embryogenic cell protein 40 [Ricinus communis]	[more]
gi\|821324906\|ref\|NP_001295705.1\|	3.9e-16	44.37	embryogenic cell protein 40-like [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000167	Dehydrin

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress
GO:0009415	response to water

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0009415	response to water
biological_process	GO:0016114	terpenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G006930.1	CmoCh19G006930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 20..165 score: 6.2
None	No IPR available	unknown	Coil	Coil	coord: 116..136 scor
None	No IPR available	PANTHER	PTHR33346	FAMILY NOT NAMED	coord: 9..177 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G006930	Cucsa.109370	Cucumber (Gy14) v1	cgycmoB0251
CmoCh19G006930	CmaCh20G008280	Cucurbita maxima (Rimu)	cmacmoB548
CmoCh19G006930	Cla015906	Watermelon (97103) v1	cmowmB496
CmoCh19G006930	Csa2G249810	Cucumber (Chinese Long) v2	cmocuB495
CmoCh19G006930	MELO3C013444	Melon (DHL92) v3.5.1	cmomeB453
CmoCh19G006930	ClCG02G004780	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G006930	CSPI02G12490	Wild cucumber (PI 183967)	cmocpiB500
CmoCh19G006930	Lsi11G011220	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G006930	Cp4.1LG16g02640	Cucurbita pepo (Zucchini)	cmocpeB484
CmoCh19G006930	CsaV3_2G015030	Cucumber (Chinese Long) v3	cmocucB0590
CmoCh19G006930	Cla97C02G031760	Watermelon (97103) v2	cmowmbB512
CmoCh19G006930	Bhi10G001578	Wax gourd	cmowgoB0665
CmoCh19G006930	Bhi05G001121	Wax gourd	cmowgoB0641
CmoCh19G006930	CsGy2G012510	Cucumber (Gy14) v2	cgybcmoB202
CmoCh19G006930	Carg19398	Silver-seed gourd	carcmoB0433

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G006930	CmoCh20G008370	Cucurbita moschata (Rifu)	cmocmoB382

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G006930	Silver-seed gourd	carcmoB0246
CmoCh19G006930	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G006930	Cucurbita moschata (Rifu)	cmocmoB111
CmoCh19G006930	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh19G006930	Cucumber (Gy14) v1	cgycmoB1037
CmoCh19G006930	Cucurbita maxima (Rimu)	cmacmoB146
CmoCh19G006930	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G006930	Cucurbita maxima (Rimu)	cmacmoB599
CmoCh19G006930	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G006930	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G006930	Watermelon (Charleston Gray)	cmowcgB455
CmoCh19G006930	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G006930	Cucurbita pepo (Zucchini)	cmocpeB495
CmoCh19G006930	Cucurbita pepo (Zucchini)	cmocpeB499
CmoCh19G006930	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G006930	Melon (DHL92) v3.6.1	cmomedB522