CmoCh18G002570 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCACCGTGTAACAATTAGGAAATGGCCTCATAACCTTCCATGAAATGCCCCAAACTTCATCACTGAGTTCACCAAAAAGCAGAGAAGAAACAGAACAAACCAGCTCTGTTTATTAGCTCAGCCAGAGAAACAATGGTTCGAGGCATTATCAGCCCCCCAAGATCCCGATCTTCCCCCAGAGAAAGCAGACCATTCAACAACAATGGAGCCACCAATCCACCGTCCAGACCCAATTACATGTCCCCACGCCGCCGCCCAACGACACCCATTAACCCCAACGAGCTGCGAACCCATAGAAAAGAACCCCAACCCACCGTCGTGAAACGCCCAACCAAACCCACCGATAGATCTTCAAACCCTCCACGCATCGACCCATCAAGACCCAATTCAAAGCTTGCCCCCTCAAGGCCAGCAGCCCCAAGCCCAAATGAGAGGAAATTAGACACCAAAACAGCGCCTAAAACCACCACTAGATTCTCTTCCCCTCGCCCAACCAAACCAATAACTCCGCCGTCGAAGAGCAATGGAAAAGGAGCAAGTGGGTCTGGTTCAAGATCCGATTTTTCTCGTGCCAAACCAAGCGATTCTCAAAAGGGTACTCCCAAAAACTTGCGGAGCGGTCGGTTGAATGATCAGCAAGATGAACAAATTGTTCGTAGTTATTCGGATGGATCTTATGGTGCTCGTACTCTTAGCGACCCTGATGTTCATAAGTTACATCAGCTTTCTCTTGATGGTAAGCCTTTACCCATTTTCAGATTCAAAAGGTTTATGTATGTATTTTGTGTTGAGGATTGTTGGTAGAAAGTCCCACATTCGCCAATTTAGAGAATGTTATATCTTCGTTGGTATGAGCAATATCGTACCAATGTAGAGACCTGCGATTCTTAACATGGTATCAGAGTCATGCCCTTAATTTAGTCATGTCAATAAAATCTTCAAGTATCGAACAAAGAAATTGCTAGTGTCGAAGGAGTCGTCAAAAGTGATTCATGTGTCGAACAAAGAGTGTACTTTGTTCGAGAGCTCCAAAGAAAGGAGTCGAGTCTCGATTAAGGAGAAATTGTTCGAGGGAAACATAGACCTCAAGGAAGGCTCTATGGTATACTTTGTTCGAGGGGAGGATTGTTGGGAGGGAGTCCCACATTGGCTAGTTTAGGAATGATCGTGGATTTATAAGTAAAGAATATATCATACCAATGTGGAGATCCGTGATCCCTAACGTTCTTGAAAATTTTATGTAGATAAGGATCTTGCGAACATCGTTCTTCATGCAAATTTGGTATACGAATCACTCGCCTCAGAAACAAAGGAAGAAGAATGTTCTTCCCAAGGCAATAATAGTTCAAGAATGTTTCAAATTTACAAGGAAATTGCATCCCATCATCAAGGAAACTCATCCATTACATCTTACATTACAAAGCTGAAGGCTTTATGGGATGAACTCGAGGCCTACATTGACACCCCCAAATGTTCTTGCGGTTCAACAGAGAAACAGAGTGAGCAAATTGAAAGGGAAAAAGTCATGCAATTTCTTATAGGATTAAACGATTCTTATTCCACCATTTGTGCTCAAATTCTTCATATGAAGCCATTTCCAACGGTGGAGAAAGCTTGTTGTGCAATACTTCGTGAAGAAAAACGCAGGGAATTGGTGTTATCATTGGAGATTGTTGCCGCCAAAGTGATCCAAAACAATTGGCTTCTTCAAAATGGTCATTCGATCAATGGTGATAATGAAGAAGTTGATCATATGAATCTTCAGGACCTGAAAGCTGATCAAAATGAAGCTATGAGTATTCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTGTTCGATGTTGAATGTTTTCAGCTCAAGAGAGGTTAGCTCCATGACTGGTGAGTAGCAGCTTGTACTCATTTATTAAATGCAATAGATATCGTTGAATTAATGCAAACAACCCATATCTTGAACTGAATAGCTATTTTTTACTTTCTAAGGTAGAGGGACGTTTAGTTTATTCTTCAAAAGTAAGTAATTATGTTGAAAAGTTTCAATTATCTCATCTTCTTAA CCCACCGTGTAACAATTAGGAAATGGCCTCATAACCTTCCATGAAATGCCCCAAACTTCATCACTGAGTTCACCAAAAAGCAGAGAAGAAACAGAACAAACCAGCTCTGTTTATTAGCTCAGCCAGAGAAACAATGGTTCGAGGCATTATCAGCCCCCCAAGATCCCGATCTTCCCCCAGAGAAAGCAGACCATTCAACAACAATGGAGCCACCAATCCACCGTCCAGACCCAATTACATGTCCCCACGCCGCCGCCCAACGACACCCATTAACCCCAACGAGCTGCGAACCCATAGAAAAGAACCCCAACCCACCGTCGTGAAACGCCCAACCAAACCCACCGATAGATCTTCAAACCCTCCACGCATCGACCCATCAAGACCCAATTCAAAGCTTGCCCCCTCAAGGCCAGCAGCCCCAAGCCCAAATGAGAGGAAATTAGACACCAAAACAGCGCCTAAAACCACCACTAGATTCTCTTCCCCTCGCCCAACCAAACCAATAACTCCGCCGTCGAAGAGCAATGGAAAAGGAGCAAGTGGGTCTGGTTCAAGATCCGATTTTTCTCGTGCCAAACCAAGCGATTCTCAAAAGGGTACTCCCAAAAACTTGCGGAGCGGTCGGTTGAATGATCAGCAAGATGAACAAATTGTTCGTAGTTATTCGGATGGATCTTATGGTGCTCGTACTCTTAGCGACCCTGATGTTCATAAGTTACATCAGCTTTCTCTTGATGATAAGGATCTTGCGAACATCGTTCTTCATGCAAATTTGGTATACGAATCACTCGCCTCAGAAACAAAGGAAGAAGAATGTTCTTCCCAAGGCAATAATAGTTCAAGAATGTTTCAAATTTACAAGGAAATTGCATCCCATCATCAAGGAAACTCATCCATTACATCTTACATTACAAAGCTGAAGGCTTTATGGGATGAACTCGAGGCCTACATTGACACCCCCAAATGTTCTTGCGGTTCAACAGAGAAACAGAGTGAGCAAATTGAAAGGGAAAAAGTCATGCAATTTCTTATAGGATTAAACGATTCTTATTCCACCATTTGTGCTCAAATTCTTCATATGAAGCCATTTCCAACGGTGGAGAAAGCTTGTTGTGCAATACTTCGTGAAGAAAAACGCAGGGAATTGGTGTTATCATTGGAGATTGTTGCCGCCAAAGTGATCCAAAACAATTGGCTTCTTCAAAATGGTCATTCGATCAATGGTGATAATGAAGAAGTTGATCATATGAATCTTCAGGACCTGAAAGCTGATCAAAATGAAGCTATGAGTATTCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTGTTCGATGTTGAATGTTTTCAGCTCAAGAGAGGTTAGCTCCATGACTGGTGAGTAGCAGCTTGTACTCATTTATTAAATGCAATAGATATCGTTGAATTAATGCAAACAACCCATATCTTGAACTGAATAGCTATTTTTTACTTTCTAAGGTAGAGGGACGTTTAGTTTATTCTTCAAAAGTAAGTAATTATGTTGAAAAGTTTCAATTATCTCATCTTCTTAA ATGGTTCGAGGCATTATCAGCCCCCCAAGATCCCGATCTTCCCCCAGAGAAAGCAGACCATTCAACAACAATGGAGCCACCAATCCACCGTCCAGACCCAATTACATGTCCCCACGCCGCCGCCCAACGACACCCATTAACCCCAACGAGCTGCGAACCCATAGAAAAGAACCCCAACCCACCGTCGTGAAACGCCCAACCAAACCCACCGATAGATCTTCAAACCCTCCACGCATCGACCCATCAAGACCCAATTCAAAGCTTGCCCCCTCAAGGCCAGCAGCCCCAAGCCCAAATGAGAGGAAATTAGACACCAAAACAGCGCCTAAAACCACCACTAGATTCTCTTCCCCTCGCCCAACCAAACCAATAACTCCGCCGTCGAAGAGCAATGGAAAAGGAGCAAGTGGGTCTGGTTCAAGATCCGATTTTTCTCGTGCCAAACCAAGCGATTCTCAAAAGGGTACTCCCAAAAACTTGCGGAGCGGTCGGTTGAATGATCAGCAAGATGAACAAATTGTTCGTAGTTATTCGGATGGATCTTATGGTGCTCGTACTCTTAGCGACCCTGATGTTCATAAGTTACATCAGCTTTCTCTTGATGATAAGGATCTTGCGAACATCGTTCTTCATGCAAATTTGGTATACGAATCACTCGCCTCAGAAACAAAGGAAGAAGAATGTTCTTCCCAAGGCAATAATAGTTCAAGAATGTTTCAAATTTACAAGGAAATTGCATCCCATCATCAAGGAAACTCATCCATTACATCTTACATTACAAAGCTGAAGGCTTTATGGGATGAACTCGAGGCCTACATTGACACCCCCAAATGTTCTTGCGGTTCAACAGAGAAACAGAGTGAGCAAATTGAAAGGGAAAAAGTCATGCAATTTCTTATAGGATTAAACGATTCTTATTCCACCATTTGTGCTCAAATTCTTCATATGAAGCCATTTCCAACGGTGGAGAAAGCTTGTTGTGCAATACTTCGTGAAGAAAAACGCAGGGAATTGGTGTTATCATTGGAGATTGTTGCCGCCAAAGTGATCCAAAACAATTGGCTTCTTCAAAATGGTCATTCGATCAATGGTGATAATGAAGAAGTTGATCATATGAATCTTCAGGACCTGAAAGCTGATCAAAATGAAGCTATGAGTATTCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTGTTCGATGTTGA
BLAST of CmoCh18G002570 vs. TrEMBL
Match: A0A0A0LRE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058680 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30 Identity = 133/372 (35.75%), Postives = 198/372 (53.23%), Query Frame = 1
BLAST of CmoCh18G002570 vs. TrEMBL
Match: A0A0A0LU31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058670 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30 Identity = 130/351 (37.04%), Postives = 184/351 (52.42%), Query Frame = 1
BLAST of CmoCh18G002570 vs. TrEMBL
Match: A0A0A0LRX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059720 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.9e-23 Identity = 65/151 (43.05%), Postives = 108/151 (71.52%), Query Frame = 1
BLAST of CmoCh18G002570 vs. TrEMBL
Match: A5BC87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006992 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.9e-22 Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 1
BLAST of CmoCh18G002570 vs. TrEMBL
Match: A5BCQ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025518 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of CmoCh18G002570 vs. NCBI nr
Match: gi|778658332|ref|XP_011652531.1| (PREDICTED: protein ENL-like [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30 Identity = 133/372 (35.75%), Postives = 198/372 (53.23%), Query Frame = 1
BLAST of CmoCh18G002570 vs. NCBI nr
Match: gi|700209388|gb|KGN64484.1| (hypothetical protein Csa_1G058670 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30 Identity = 130/351 (37.04%), Postives = 184/351 (52.42%), Query Frame = 1
BLAST of CmoCh18G002570 vs. NCBI nr
Match: gi|449474397|ref|XP_004154160.1| (PREDICTED: uncharacterized protein LOC101211799 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23 Identity = 102/266 (38.35%), Postives = 147/266 (55.26%), Query Frame = 1
BLAST of CmoCh18G002570 vs. NCBI nr
Match: gi|700209397|gb|KGN64493.1| (hypothetical protein Csa_1G059720 [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 4.2e-23 Identity = 65/151 (43.05%), Postives = 108/151 (71.52%), Query Frame = 1
BLAST of CmoCh18G002570 vs. NCBI nr
Match: gi|645241889|ref|XP_008227293.1| (PREDICTED: uncharacterized protein LOC103326824 [Prunus mume]) HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22 Identity = 76/186 (40.86%), Postives = 112/186 (60.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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