CmoCh18G002570.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G002570.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8
Location	Cmo_Chr18 : 1709535 .. 1711596 (+)
Sequence length	1554

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACCGTGTAACAATTAGGAAATGGCCTCATAACCTTCCATGAAATGCCCCAAACTTCATCACTGAGTTCACCAAAAAGCAGAGAAGAAACAGAACAAACCAGCTCTGTTTATTAGCTCAGCCAGAGAAACAATGGTTCGAGGCATTATCAGCCCCCCAAGATCCCGATCTTCCCCCAGAGAAAGCAGACCATTCAACAACAATGGAGCCACCAATCCACCGTCCAGACCCAATTACATGTCCCCACGCCGCCGCCCAACGACACCCATTAACCCCAACGAGCTGCGAACCCATAGAAAAGAACCCCAACCCACCGTCGTGAAACGCCCAACCAAACCCACCGATAGATCTTCAAACCCTCCACGCATCGACCCATCAAGACCCAATTCAAAGCTTGCCCCCTCAAGGCCAGCAGCCCCAAGCCCAAATGAGAGGAAATTAGACACCAAAACAGCGCCTAAAACCACCACTAGATTCTCTTCCCCTCGCCCAACCAAACCAATAACTCCGCCGTCGAAGAGCAATGGAAAAGGAGCAAGTGGGTCTGGTTCAAGATCCGATTTTTCTCGTGCCAAACCAAGCGATTCTCAAAAGGGTACTCCCAAAAACTTGCGGAGCGGTCGGTTGAATGATCAGCAAGATGAACAAATTGTTCGTAGTTATTCGGATGGATCTTATGGTGCTCGTACTCTTAGCGACCCTGATGTTCATAAGTTACATCAGCTTTCTCTTGATGGTAAGCCTTTACCCATTTTCAGATTCAAAAGGTTTATGTATGTATTTTGTGTTGAGGATTGTTGGTAGAAAGTCCCACATTCGCCAATTTAGAGAATGTTATATCTTCGTTGGTATGAGCAATATCGTACCAATGTAGAGACCTGCGATTCTTAACATGGTATCAGAGTCATGCCCTTAATTTAGTCATGTCAATAAAATCTTCAAGTATCGAACAAAGAAATTGCTAGTGTCGAAGGAGTCGTCAAAAGTGATTCATGTGTCGAACAAAGAGTGTACTTTGTTCGAGAGCTCCAAAGAAAGGAGTCGAGTCTCGATTAAGGAGAAATTGTTCGAGGGAAACATAGACCTCAAGGAAGGCTCTATGGTATACTTTGTTCGAGGGGAGGATTGTTGGGAGGGAGTCCCACATTGGCTAGTTTAGGAATGATCGTGGATTTATAAGTAAAGAATATATCATACCAATGTGGAGATCCGTGATCCCTAACGTTCTTGAAAATTTTATGTAGATAAGGATCTTGCGAACATCGTTCTTCATGCAAATTTGGTATACGAATCACTCGCCTCAGAAACAAAGGAAGAAGAATGTTCTTCCCAAGGCAATAATAGTTCAAGAATGTTTCAAATTTACAAGGAAATTGCATCCCATCATCAAGGAAACTCATCCATTACATCTTACATTACAAAGCTGAAGGCTTTATGGGATGAACTCGAGGCCTACATTGACACCCCCAAATGTTCTTGCGGTTCAACAGAGAAACAGAGTGAGCAAATTGAAAGGGAAAAAGTCATGCAATTTCTTATAGGATTAAACGATTCTTATTCCACCATTTGTGCTCAAATTCTTCATATGAAGCCATTTCCAACGGTGGAGAAAGCTTGTTGTGCAATACTTCGTGAAGAAAAACGCAGGGAATTGGTGTTATCATTGGAGATTGTTGCCGCCAAAGTGATCCAAAACAATTGGCTTCTTCAAAATGGTCATTCGATCAATGGTGATAATGAAGAAGTTGATCATATGAATCTTCAGGACCTGAAAGCTGATCAAAATGAAGCTATGAGTATTCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTGTTCGATGTTGAATGTTTTCAGCTCAAGAGAGGTTAGCTCCATGACTGGTGAGTAGCAGCTTGTACTCATTTATTAAATGCAATAGATATCGTTGAATTAATGCAAACAACCCATATCTTGAACTGAATAGCTATTTTTTACTTTCTAAGGTAGAGGGACGTTTAGTTTATTCTTCAAAAGTAAGTAATTATGTTGAAAAGTTTCAATTATCTCATCTTCTTAA

mRNA sequence

CCCACCGTGTAACAATTAGGAAATGGCCTCATAACCTTCCATGAAATGCCCCAAACTTCATCACTGAGTTCACCAAAAAGCAGAGAAGAAACAGAACAAACCAGCTCTGTTTATTAGCTCAGCCAGAGAAACAATGGTTCGAGGCATTATCAGCCCCCCAAGATCCCGATCTTCCCCCAGAGAAAGCAGACCATTCAACAACAATGGAGCCACCAATCCACCGTCCAGACCCAATTACATGTCCCCACGCCGCCGCCCAACGACACCCATTAACCCCAACGAGCTGCGAACCCATAGAAAAGAACCCCAACCCACCGTCGTGAAACGCCCAACCAAACCCACCGATAGATCTTCAAACCCTCCACGCATCGACCCATCAAGACCCAATTCAAAGCTTGCCCCCTCAAGGCCAGCAGCCCCAAGCCCAAATGAGAGGAAATTAGACACCAAAACAGCGCCTAAAACCACCACTAGATTCTCTTCCCCTCGCCCAACCAAACCAATAACTCCGCCGTCGAAGAGCAATGGAAAAGGAGCAAGTGGGTCTGGTTCAAGATCCGATTTTTCTCGTGCCAAACCAAGCGATTCTCAAAAGGGTACTCCCAAAAACTTGCGGAGCGGTCGGTTGAATGATCAGCAAGATGAACAAATTGTTCGTAGTTATTCGGATGGATCTTATGGTGCTCGTACTCTTAGCGACCCTGATGTTCATAAGTTACATCAGCTTTCTCTTGATGATAAGGATCTTGCGAACATCGTTCTTCATGCAAATTTGGTATACGAATCACTCGCCTCAGAAACAAAGGAAGAAGAATGTTCTTCCCAAGGCAATAATAGTTCAAGAATGTTTCAAATTTACAAGGAAATTGCATCCCATCATCAAGGAAACTCATCCATTACATCTTACATTACAAAGCTGAAGGCTTTATGGGATGAACTCGAGGCCTACATTGACACCCCCAAATGTTCTTGCGGTTCAACAGAGAAACAGAGTGAGCAAATTGAAAGGGAAAAAGTCATGCAATTTCTTATAGGATTAAACGATTCTTATTCCACCATTTGTGCTCAAATTCTTCATATGAAGCCATTTCCAACGGTGGAGAAAGCTTGTTGTGCAATACTTCGTGAAGAAAAACGCAGGGAATTGGTGTTATCATTGGAGATTGTTGCCGCCAAAGTGATCCAAAACAATTGGCTTCTTCAAAATGGTCATTCGATCAATGGTGATAATGAAGAAGTTGATCATATGAATCTTCAGGACCTGAAAGCTGATCAAAATGAAGCTATGAGTATTCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTGTTCGATGTTGAATGTTTTCAGCTCAAGAGAGGTTAGCTCCATGACTGGTGAGTAGCAGCTTGTACTCATTTATTAAATGCAATAGATATCGTTGAATTAATGCAAACAACCCATATCTTGAACTGAATAGCTATTTTTTACTTTCTAAGGTAGAGGGACGTTTAGTTTATTCTTCAAAAGTAAGTAATTATGTTGAAAAGTTTCAATTATCTCATCTTCTTAA

Coding sequence (CDS)

ATGGTTCGAGGCATTATCAGCCCCCCAAGATCCCGATCTTCCCCCAGAGAAAGCAGACCATTCAACAACAATGGAGCCACCAATCCACCGTCCAGACCCAATTACATGTCCCCACGCCGCCGCCCAACGACACCCATTAACCCCAACGAGCTGCGAACCCATAGAAAAGAACCCCAACCCACCGTCGTGAAACGCCCAACCAAACCCACCGATAGATCTTCAAACCCTCCACGCATCGACCCATCAAGACCCAATTCAAAGCTTGCCCCCTCAAGGCCAGCAGCCCCAAGCCCAAATGAGAGGAAATTAGACACCAAAACAGCGCCTAAAACCACCACTAGATTCTCTTCCCCTCGCCCAACCAAACCAATAACTCCGCCGTCGAAGAGCAATGGAAAAGGAGCAAGTGGGTCTGGTTCAAGATCCGATTTTTCTCGTGCCAAACCAAGCGATTCTCAAAAGGGTACTCCCAAAAACTTGCGGAGCGGTCGGTTGAATGATCAGCAAGATGAACAAATTGTTCGTAGTTATTCGGATGGATCTTATGGTGCTCGTACTCTTAGCGACCCTGATGTTCATAAGTTACATCAGCTTTCTCTTGATGATAAGGATCTTGCGAACATCGTTCTTCATGCAAATTTGGTATACGAATCACTCGCCTCAGAAACAAAGGAAGAAGAATGTTCTTCCCAAGGCAATAATAGTTCAAGAATGTTTCAAATTTACAAGGAAATTGCATCCCATCATCAAGGAAACTCATCCATTACATCTTACATTACAAAGCTGAAGGCTTTATGGGATGAACTCGAGGCCTACATTGACACCCCCAAATGTTCTTGCGGTTCAACAGAGAAACAGAGTGAGCAAATTGAAAGGGAAAAAGTCATGCAATTTCTTATAGGATTAAACGATTCTTATTCCACCATTTGTGCTCAAATTCTTCATATGAAGCCATTTCCAACGGTGGAGAAAGCTTGTTGTGCAATACTTCGTGAAGAAAAACGCAGGGAATTGGTGTTATCATTGGAGATTGTTGCCGCCAAAGTGATCCAAAACAATTGGCTTCTTCAAAATGGTCATTCGATCAATGGTGATAATGAAGAAGTTGATCATATGAATCTTCAGGACCTGAAAGCTGATCAAAATGAAGCTATGAGTATTCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTGTTCGATGTTGA

Homology

[Close]

BLAST of CmoCh18G002570.1 vs. TrEMBL
Match: A0A0A0LRE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058680 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 133/372 (35.75%), Postives = 198/372 (53.23%), Query Frame = 1


Query: 3   RGIISPPRSRSSPRESRPFNNNGATNPPSRPNYMSPRRRPTTPINPNELRTHRKEPQPTV 62
           RGI+ P RS+ SP+ +R            +P  + P  + +   NP      +K+P    
Sbjct: 4   RGIMGPKRSQFSPKPNR------------KP--IDPEAKKSAKKNP------KKDPNFPS 63

Query: 63  VKRPTKPTDRSSNP-PRIDPSRPNSKLAPSRPAAPSPNERKLDTKTAPKTTTRFSSPRPT 122
             +P KP   ++NP    + + PNS+   S P  P         K+ P T +    P   
Sbjct: 64  SSKP-KPQAAATNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLP 123

Query: 123 KPITPPSKSNGKGAS-GSGSRSDFSRAKPSD-SQKGTPKNLRSGRLNDQQDEQIVRSYSD 182
             ++PP +S  + A+  S S+ +F R   +D S K  PK   +   + +Q    V++ +D
Sbjct: 124 HNLSPPRRSKSQPATPSSASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKH--VKTTAD 183

Query: 183 GSYGARTLSDPDV--HKLHQLSLDDKDLANIVLHANLVYESLASETKEEECSSQGNNSSR 242
                 + S  D+    L +LS + KDL +I L  N + + + S  ++EE SS+  +S  
Sbjct: 184 PHSPGYSDSSHDIGDRLLQRLSSEGKDLDDI-LKGNTIDDLMGSNNRKEESSSRNVSSLA 243

Query: 243 MFQIYKEIASHHQGNSSITSYITKLKALWDELEAYIDTPKCSCGSTEKQSEQIEREKVMQ 302
           + QIY++IASH QGN S+  Y  KLK LW+++  Y      S       SE  ER+KV+Q
Sbjct: 244 ILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYSSE---SVEGIAFWSELTERDKVIQ 303

Query: 303 FLIGLNDSYSTICAQILHMKPFPTVEKACCAILREEKRRELVLSLEIVAAKVIQNNWLLQ 362
           F IGLND YS IC+QIL  +PFPTVE+A   I+REEKRREL ++L  VAA+VIQ+++  Q
Sbjct: 304 FFIGLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSY--Q 346

Query: 363 NGHSINGDNEEV 370
           NG S NGDN+ +
Sbjct: 364 NGSSNNGDNKNL 346

[Close]

BLAST of CmoCh18G002570.1 vs. TrEMBL
Match: A0A0A0LU31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058670 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 130/351 (37.04%), Postives = 184/351 (52.42%), Query Frame = 1


Query: 33  PNYMSPRRRPTTPINPNELRTHRK-EPQPTVVKRPTK-PTDRSSNPPRIDP----SRPNS 92
           P++ SP  R     +PN  +     E + +  K P K P   SS+ P+       S PNS
Sbjct: 17  PHFKSPVNRRKINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKPKPQAAARNSNPNS 76

Query: 93  KLAPSRPAAPS---PNERKLDTKTAPKTTTRFSSPRPTKPITPPSKSNGKGA--SGSGSR 152
             APS PA P    P  RK  TK+ P T +    P P+   +P  K+  +    S S   
Sbjct: 77  NSAPSSPAPPPTPIPTTRK--TKSQPPTPSPALPPTPSPTPSPTRKTKCQPTMPSSSSKN 136

Query: 153 SDFSRAKPSDSQKGTPKNLRSGRLNDQQDEQIVRSYSDGSYGARTLSDPDVHKLHQLSLD 212
           +   R    +S K +PK   +   +  +      +Y +    +   +D     L  LS +
Sbjct: 137 NVVRRIYNDNSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIGHRLLQGLSFE 196

Query: 213 DKDLANIVLHANLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITK 272
            KDL +I L  N + + + S  K+EE S +  +S  + QIY++IASH QGN S+  Y  K
Sbjct: 197 GKDLDDI-LKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNLSVERYFKK 256

Query: 273 LKALWDELEAYIDT---PKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKP 332
           LK LW+++  Y         S G+    SE  ER+KVMQF IGLND YS IC+QIL  +P
Sbjct: 257 LKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIICSQILVNQP 316

Query: 333 FPTVEKACCAILREEKRRELVLSLEIVAAKVIQNNWLLQNGHSINGDNEEV 370
           FPTVE+A   I+REEKRREL ++L I+AA+VIQ+++  Q G S NGDN+ +
Sbjct: 317 FPTVEEAYSEIIREEKRRELFVALGIMAAQVIQSSY--QYGSSNNGDNKNL 362

[Close]

BLAST of CmoCh18G002570.1 vs. TrEMBL
Match: A0A0A0LRX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059720 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.9e-23
Identity = 65/151 (43.05%), Postives = 108/151 (71.52%), Query Frame = 1


Query: 193 HKLHQLSLDDKD--LANIVLHANLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQ 252
           ++LH LS+ + +  +AN V  +  +++S++S+T  E+ +S+ N+ + + +IY+ IASH +
Sbjct: 78  NQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRK 137

Query: 253 GNSSITSYITKLKALWDELEAY---IDTPKCSCGST-EKQSEQIEREKVMQFLIGLNDSY 312
           GN+SI SY   LKALW+E  A    +++P+ S  +  E++SE +EREK+MQFL+GLNDSY
Sbjct: 138 GNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSY 197

Query: 313 STICAQILHMKPFPTVEKACCAILREEKRRE 338
           S +C+QIL ++P PTV++A   I+ E+K R+
Sbjct: 198 SLLCSQILAVRPSPTVDQAYSLIVGEQKTRK 228

[Close]

BLAST of CmoCh18G002570.1 vs. TrEMBL
Match: A5BC87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006992 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.9e-22
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 1


Query: 204 DLANIVLHANLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLK 263
           D+A+ V++A    E  A      E  SQGN+S R++QI ++I  H QG  SI+ Y TKLK
Sbjct: 95  DIASSVIYAETTSEIWADL---RERFSQGNDS-RIYQIKRDIVEHRQGQQSISVYYTKLK 154

Query: 264 ALWDELEAYIDTPKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVE 323
           A WDEL +Y +   CSCG  EK  E  E+E+VMQFL+GLNDSY+ I  QIL M+P P   
Sbjct: 155 AFWDELSSYHEVLSCSCGGLEKLKEMDEKERVMQFLMGLNDSYAAIRGQILLMQPLPDTR 214

Query: 324 KACCAILREEK-----RRELVLSLEIVAAKVIQNNWLLQN---GHSINGDNEEV---DHM 383
           +    +L++EK     +  L  S        I+  + L     GH ++G N +     H 
Sbjct: 215 RVYSLVLQQEKQVQKQKTPLHCSYCDRDYHSIEKCYYLHGFPIGHKLHGKNVKXPNQHHS 274

Query: 384 NLQDLKADQNEAM 386
           N  ++K + N+AM
Sbjct: 275 NANNVKVETNKAM 283

[Close]

BLAST of CmoCh18G002570.1 vs. TrEMBL
Match: A5BCQ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025518 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21
Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 1


Query: 226 EECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDELEAYIDTPKCSCGSTEK 285
           E    QGN+S R++QI ++I  H QG  SI+ Y TKLKA WDEL +Y +   CSCG  EK
Sbjct: 152 ENVFRQGNDS-RIYQIKRDIVEHRQGQQSISVYYTKLKAFWDELSSYHEVLSCSCGGLEK 211

Query: 286 QSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREEKRRELVLS 342
             E+ E+E+VMQFL+GLNDSY+ I  QIL M P P   +    +L++EK+ E+ L+
Sbjct: 212 LKERDEKERVMQFLMGLNDSYAAIRGQILLMHPLPDTRRVYSLVLQQEKQVEVSLN 266

[Close]

BLAST of CmoCh18G002570.1 vs. NCBI nr
Match: gi|778658332|ref|XP_011652531.1| (PREDICTED: protein ENL-like [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 133/372 (35.75%), Postives = 198/372 (53.23%), Query Frame = 1


Query: 3   RGIISPPRSRSSPRESRPFNNNGATNPPSRPNYMSPRRRPTTPINPNELRTHRKEPQPTV 62
           RGI+ P RS+ SP+ +R            +P  + P  + +   NP      +K+P    
Sbjct: 4   RGIMGPKRSQFSPKPNR------------KP--IDPEAKKSAKKNP------KKDPNFPS 63

Query: 63  VKRPTKPTDRSSNP-PRIDPSRPNSKLAPSRPAAPSPNERKLDTKTAPKTTTRFSSPRPT 122
             +P KP   ++NP    + + PNS+   S P  P         K+ P T +    P   
Sbjct: 64  SSKP-KPQAAATNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLP 123

Query: 123 KPITPPSKSNGKGAS-GSGSRSDFSRAKPSD-SQKGTPKNLRSGRLNDQQDEQIVRSYSD 182
             ++PP +S  + A+  S S+ +F R   +D S K  PK   +   + +Q    V++ +D
Sbjct: 124 HNLSPPRRSKSQPATPSSASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKH--VKTTAD 183

Query: 183 GSYGARTLSDPDV--HKLHQLSLDDKDLANIVLHANLVYESLASETKEEECSSQGNNSSR 242
                 + S  D+    L +LS + KDL +I L  N + + + S  ++EE SS+  +S  
Sbjct: 184 PHSPGYSDSSHDIGDRLLQRLSSEGKDLDDI-LKGNTIDDLMGSNNRKEESSSRNVSSLA 243

Query: 243 MFQIYKEIASHHQGNSSITSYITKLKALWDELEAYIDTPKCSCGSTEKQSEQIEREKVMQ 302
           + QIY++IASH QGN S+  Y  KLK LW+++  Y      S       SE  ER+KV+Q
Sbjct: 244 ILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYSSE---SVEGIAFWSELTERDKVIQ 303

Query: 303 FLIGLNDSYSTICAQILHMKPFPTVEKACCAILREEKRRELVLSLEIVAAKVIQNNWLLQ 362
           F IGLND YS IC+QIL  +PFPTVE+A   I+REEKRREL ++L  VAA+VIQ+++  Q
Sbjct: 304 FFIGLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSY--Q 346

Query: 363 NGHSINGDNEEV 370
           NG S NGDN+ +
Sbjct: 364 NGSSNNGDNKNL 346

[Close]

BLAST of CmoCh18G002570.1 vs. NCBI nr
Match: gi|700209388|gb|KGN64484.1| (hypothetical protein Csa_1G058670 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 130/351 (37.04%), Postives = 184/351 (52.42%), Query Frame = 1


Query: 33  PNYMSPRRRPTTPINPNELRTHRK-EPQPTVVKRPTK-PTDRSSNPPRIDP----SRPNS 92
           P++ SP  R     +PN  +     E + +  K P K P   SS+ P+       S PNS
Sbjct: 17  PHFKSPVNRRKINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKPKPQAAARNSNPNS 76

Query: 93  KLAPSRPAAPS---PNERKLDTKTAPKTTTRFSSPRPTKPITPPSKSNGKGA--SGSGSR 152
             APS PA P    P  RK  TK+ P T +    P P+   +P  K+  +    S S   
Sbjct: 77  NSAPSSPAPPPTPIPTTRK--TKSQPPTPSPALPPTPSPTPSPTRKTKCQPTMPSSSSKN 136

Query: 153 SDFSRAKPSDSQKGTPKNLRSGRLNDQQDEQIVRSYSDGSYGARTLSDPDVHKLHQLSLD 212
           +   R    +S K +PK   +   +  +      +Y +    +   +D     L  LS +
Sbjct: 137 NVVRRIYNDNSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIGHRLLQGLSFE 196

Query: 213 DKDLANIVLHANLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITK 272
            KDL +I L  N + + + S  K+EE S +  +S  + QIY++IASH QGN S+  Y  K
Sbjct: 197 GKDLDDI-LKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNLSVERYFKK 256

Query: 273 LKALWDELEAYIDT---PKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKP 332
           LK LW+++  Y         S G+    SE  ER+KVMQF IGLND YS IC+QIL  +P
Sbjct: 257 LKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIICSQILVNQP 316

Query: 333 FPTVEKACCAILREEKRRELVLSLEIVAAKVIQNNWLLQNGHSINGDNEEV 370
           FPTVE+A   I+REEKRREL ++L I+AA+VIQ+++  Q G S NGDN+ +
Sbjct: 317 FPTVEEAYSEIIREEKRRELFVALGIMAAQVIQSSY--QYGSSNNGDNKNL 362

[Close]

BLAST of CmoCh18G002570.1 vs. NCBI nr
Match: gi|449474397|ref|XP_004154160.1| (PREDICTED: uncharacterized protein LOC101211799 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23
Identity = 102/266 (38.35%), Postives = 147/266 (55.26%), Query Frame = 1


Query: 79  IDPSRPNSKLAPSRPAAPSPNERKLDTKTAPKTTTRFSSPRPTKPITPPSKSNGKG-ASG 138
           I P R   K  P      S +  +L  ++   +TT  S+ R TK  + PS S  KG A G
Sbjct: 7   ISPRRSKPKKTPPAHLPGSTSAPELTIQSEIPSTT--SNRRTTKSASQPSPSTKKGKAGG 66

Query: 139 SGSRSDFSRAKPSDSQKGTPKNLRSGRLNDQQDEQIVRSYSDGSYGARTLSDPDVHKLHQ 198
           SGSR D S +  S  +                D     S S        L  P    L Q
Sbjct: 67  SGSRKDGSGSGSSHKKNS--------------DYSPNHSPSPAKTRDHLLQSP----LQQ 126

Query: 199 LSLDD-KDLANIVLHANLVYESLASETK-EEECSSQGNNSSRMFQIYKEIASHHQGNSSI 258
           LS+ D  D+AN V  +  ++++++S+T  E++ +S+ N ++ +F+IY  IASH QGN+SI
Sbjct: 127 LSIHDVNDVANNVHQSRSIHKTVSSDTIIEQQHNSESNAATMLFKIYGVIASHRQGNTSI 186

Query: 259 TSYITKLKALWDELEA---YIDTPKCSCGSTE-KQSEQIEREKVMQFLIGLNDSYSTICA 318
            SY   LKALWDE  A   + ++P+ S  +T  +QS  +EREK+MQFL+GLNDSYS++C+
Sbjct: 187 KSYFKNLKALWDEAAASSIHTNSPQSSSNNTTVEQSGLMEREKLMQFLLGLNDSYSSLCS 246

Query: 319 QILHMKPFPTVEKACCAILREEKRRE 338
           QIL  +P PTV++A   I+ EEK R+
Sbjct: 247 QILLERPSPTVDQAYSLIILEEKTRK 252

[Close]

BLAST of CmoCh18G002570.1 vs. NCBI nr
Match: gi|700209397|gb|KGN64493.1| (hypothetical protein Csa_1G059720 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 4.2e-23
Identity = 65/151 (43.05%), Postives = 108/151 (71.52%), Query Frame = 1


Query: 193 HKLHQLSLDDKD--LANIVLHANLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQ 252
           ++LH LS+ + +  +AN V  +  +++S++S+T  E+ +S+ N+ + + +IY+ IASH +
Sbjct: 78  NQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRK 137

Query: 253 GNSSITSYITKLKALWDELEAY---IDTPKCSCGST-EKQSEQIEREKVMQFLIGLNDSY 312
           GN+SI SY   LKALW+E  A    +++P+ S  +  E++SE +EREK+MQFL+GLNDSY
Sbjct: 138 GNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSY 197

Query: 313 STICAQILHMKPFPTVEKACCAILREEKRRE 338
           S +C+QIL ++P PTV++A   I+ E+K R+
Sbjct: 198 SLLCSQILAVRPSPTVDQAYSLIVGEQKTRK 228

[Close]

BLAST of CmoCh18G002570.1 vs. NCBI nr
Match: gi|645241889|ref|XP_008227293.1| (PREDICTED: uncharacterized protein LOC103326824 [Prunus mume])

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22
Identity = 76/186 (40.86%), Postives = 112/186 (60.22%), Query Frame = 1


Query: 161 RSGRLNDQQDEQIVRSYSDGSYGARTLSDPDVHKLHQLSLDDKDLANIV--LHANLVYES 220
           RS RLN     +I   + DGS  A T +D   H + Q   +D  L+ I+  +H ++    
Sbjct: 44  RSMRLNLSAKNKI--GFVDGSVKAPTSTDAK-HSIWQ-RCNDMVLSWILNSVHPDITGSV 103

Query: 221 LASETKEE------ECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDELEAY 280
           +  ET  E      E  SQGN+S R++QI +EI  H QG  S+++Y TK+KALWDEL +Y
Sbjct: 104 IYVETAAEVWNYLKERFSQGNDS-RIYQIQQEIVEHRQGQQSVSTYYTKIKALWDELSSY 163

Query: 281 IDTPKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILRE 339
            DT  C CG  ++ + + E+E+VMQFLIGLN++Y+ +  QIL M+PFP   K    IL++
Sbjct: 164 HDTLSCMCGGLKEVAARQEKERVMQFLIGLNETYAAVRGQILMMQPFPDTRKVHALILQQ 223

The following BLAST results are available for this feature:

BLAST of CmoCh18G002570.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh18G002570.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRE6_CUCSA	2.5e-30	35.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058680 PE=4 SV=1	[more]
A0A0A0LU31_CUCSA	2.5e-30	37.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058670 PE=4 SV=1	[more]
A0A0A0LRX9_CUCSA	2.9e-23	43.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059720 PE=4 SV=1	[more]
A5BC87_VITVI	1.9e-22	39.38	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006992 PE=4 SV=1	[more]
A5BCQ9_VITVI	2.1e-21	49.14	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025518 PE=4 SV=1	[more]

BLAST of CmoCh18G002570.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh18G002570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658332\|ref\|XP_011652531.1\|	3.6e-30	35.75	PREDICTED: protein ENL-like [Cucumis sativus]	[more]
gi\|700209388\|gb\|KGN64484.1\|	3.6e-30	37.04	hypothetical protein Csa_1G058670 [Cucumis sativus]	[more]
gi\|449474397\|ref\|XP_004154160.1\|	1.1e-23	38.35	PREDICTED: uncharacterized protein LOC101211799 [Cucumis sativus]	[more]
gi\|700209397\|gb\|KGN64493.1\|	4.2e-23	43.05	hypothetical protein Csa_1G059720 [Cucumis sativus]	[more]
gi\|645241889\|ref\|XP_008227293.1\|	1.6e-22	40.86	PREDICTED: uncharacterized protein LOC103326824 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh18G002570	CmoCh18G002570	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002570.1	CmoCh18G002570.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002570.1.exon.1	CmoCh18G002570.1.exon.1	exon
CmoCh18G002570.1.exon.2	CmoCh18G002570.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002570.1.five_prime_UTR.1	CmoCh18G002570.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002570.1.CDS.1	CmoCh18G002570.1.CDS.1	CDS
CmoCh18G002570.1.CDS.2	CmoCh18G002570.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002570.1.three_prime_UTR.1	CmoCh18G002570.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 233..347 score: 6.8
None	No IPR available	PANTHER	PTHR34222:SF2	SUBFAMILY NOT NAMED	coord: 233..347 score: 6.8