Cla97C03G055550 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G055550
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	UBN2_3 domain-containing protein
Location	Cla97Chr03 : 4538596 .. 4540654 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTAAGAGGAATTATCAGTCCCCCAAGATTCCGATCTTCTCCCAGAGAAGGCAGATCTCACAATAATGCAACCATCAATCCACCTTCCAAACCCACTTCAAAGAAACCAAACAATCATAATAATCCCAACCGAAGCCAAAGAAAAGAAACCCAACTCACTGCTACCCGTCCAACCAAAAGCAACAACGTTAATACATCTTCAAAAAATACTTCACGAATCAACCCTTCAACAAAACCCACTTCAAAGCTCGTATCTTCAAATCCTAGCCACAAGAAATTAGAAAACAATTCAACTACTAAAATCCACCCATCAAAACGGACGCGACCGACGTCTTCAAAGAGCAATGTAAAAGGGGAGATTGCGATTGGTTCTGGTTCAAGATCTGAGCTTTCTTCTGCTGGGAAACCAACGGCCATTGCTAAGGATAAATATTTTGATTCTCGATATGGGTCTCCTAACCCTTATTCGCCTGCACAGTTTGCTACTCTGCACGATCTTGACGTTCTTGATCAGTTACAACGTTTTTCTATCGACGGTGAGGTTTTTATGATTTCGCTCACTTTTTTTTTTTCTTTTTTTTTTTTTTCTGTGAAGATTCTCTGTTTTTGAGCTTGAAAATCTTGCAAATGCTTGGTTTGAATTTCTTCGAATCTGTTCCATACTGCAAAGGTTTTCTTCGGGAGATATATATTCTTGGGCTATGCTTAAATCTCCTCCCATTTAAAACTTTGGCTTGATTTTTTAAAATATTGGTAGAAATTAGATAATAAAGCAAGAAATTTAGAAATAGAATGACAGTTTATAAACTTAATTTTCAAAAATAAAATACCAAAAACCAAAAACTAAATAGTTACAAAATGGGTCATACAATGTTATCACTAACCTTACATGTACATTTTAGAACTATATTAGATATCAAAATTAATTATAATGCGAGACGAAAATTGAGACCTGAAATAATGGTCTCGTAATTTGATATACGAATCAAGACCAGAATGCTACTATAGCGATTCCAGATCTGAATTTTCATCTAAAAGATTTCCATGTAGCTTTGAAACAGTTATAAAAGATTAGGAGTGATATTACAACTTTTAAAATAATGAGTATTTTTTTAAATAATGAAAAGGTTCAGGTGTATTATTTTGCAATTTAGTCTTTATTTTTTAATTATTATTTTTATGGTCTATCATCGGTGGATTTGTAAATTAGCCTAATATCTAGCAGGTGATTGTTAGTATTAATTTCCGAAGAAATTACATTTTCAATAAAAAAAAAAAAAAAAAAAAAAAAGCTGAGAAAGGGGTAATTTTTACATTCTTATATATTTTATTTTATTGTTTTAAAATTTTGAAAATTTAAGGAAACAAATTAGTAAGAAAACATAGAATGTAAGACCATCTAGATATGTTTTTTTATGGTAAAAAAAATTCTGTGTGTAGGTAAAGATCTTGCAAGCATTGTCCTTCATGAATCAATGGGATCGGATACAAAGGAAGAAAGTTATTCTCAAAGCAATGATTCGAGAATGTTTCAAATTTACAAGGAAATTGCATCTCATCGTCAAGAAAACTCATCCATTACATCTTACTTCACAAAGCTCGAGGCATTATGGAATGAACTCGCCACCTTCAATACCGATTTGCCTCAATGTTCTTGCGGTGGTGTAACTGAAAAGCTAAGTGAGTATATGGAGAGAGAAAGGGTTATGCAATTTCTTGTGGGACTAAACGATTCTTATTCCAAAATGTGCAACCAAATCCTTATTACCCCTCCATTTCCAACGGTGGAGAAAGCCTATTATGCAATTATTCGAGAAGAAAAACGTAGGGAATTGCTTGCTGCATTAGAAACTGTTGCGGAAAAAGTAATTCAAAACAATTGGCTTGATCTTCAGAATCAGAATGCTCATTCCAACAATGGTGATAACTATGATGGTGTTCAAGGATTAGTTGATAGTAATAATCTTCACCAGCACCAATTTGATCAAAATCTAGTTACAAGCTTCCCCATTGACCCATTGCTAACAGACCTTGGATCTCCTGTGCGATGCTAA

mRNA sequence

ATGGTGTTAAGAGGAATTATCAGTCCCCCAAGATTCCGATCTTCTCCCAGAGAAGGCAGATCTCACAATAATGCAACCATCAATCCACCTTCCAAACCCACTTCAAAGAAACCAAACAATCATAATAATCCCAACCGAAGCCAAAGAAAAGAAACCCAACTCACTGCTACCCGTCCAACCAAAAGCAACAACGTTAATACATCTTCAAAAAATACTTCACGAATCAACCCTTCAACAAAACCCACTTCAAAGCTCGTATCTTCAAATCCTAGCCACAAGAAATTAGAAAACAATTCAACTACTAAAATCCACCCATCAAAACGGACGCGACCGACGTCTTCAAAGAGCAATGTAAAAGGGGAGATTGCGATTGGTTCTGGTTCAAGATCTGAGCTTTCTTCTGCTGGGAAACCAACGGCCATTGCTAAGGATAAATATTTTGATTCTCGATATGGGTCTCCTAACCCTTATTCGCCTGCACAGTTTGCTACTCTGCACGATCTTGACGTTCTTGATCAGTTACAACGTTTTTCTATCGACGGTAAAGATCTTGCAAGCATTGTCCTTCATGAATCAATGGGATCGGATACAAAGGAAGAAAGTTATTCTCAAAGCAATGATTCGAGAATGTTTCAAATTTACAAGGAAATTGCATCTCATCGTCAAGAAAACTCATCCATTACATCTTACTTCACAAAGCTCGAGGCATTATGGAATGAACTCGCCACCTTCAATACCGATTTGCCTCAATGTTCTTGCGGTGGTGTAACTGAAAAGCTAAGTGAGTATATGGAGAGAGAAAGGGTTATGCAATTTCTTGTGGGACTAAACGATTCTTATTCCAAAATGTGCAACCAAATCCTTATTACCCCTCCATTTCCAACGGTGGAGAAAGCCTATTATGCAATTATTCGAGAAGAAAAACGTAGGGAATTGCTTGCTGCATTAGAAACTGTTGCGGAAAAAGTAATTCAAAACAATTGGCTTGATCTTCAGAATCAGAATGCTCATTCCAACAATGGTGATAACTATGATGGTGTTCAAGGATTAGTTGATAGTAATAATCTTCACCAGCACCAATTTGATCAAAATCTAGTTACAAGCTTCCCCATTGACCCATTGCTAACAGACCTTGGATCTCCTGTGCGATGCTAA

Coding sequence (CDS)

ATGGTGTTAAGAGGAATTATCAGTCCCCCAAGATTCCGATCTTCTCCCAGAGAAGGCAGATCTCACAATAATGCAACCATCAATCCACCTTCCAAACCCACTTCAAAGAAACCAAACAATCATAATAATCCCAACCGAAGCCAAAGAAAAGAAACCCAACTCACTGCTACCCGTCCAACCAAAAGCAACAACGTTAATACATCTTCAAAAAATACTTCACGAATCAACCCTTCAACAAAACCCACTTCAAAGCTCGTATCTTCAAATCCTAGCCACAAGAAATTAGAAAACAATTCAACTACTAAAATCCACCCATCAAAACGGACGCGACCGACGTCTTCAAAGAGCAATGTAAAAGGGGAGATTGCGATTGGTTCTGGTTCAAGATCTGAGCTTTCTTCTGCTGGGAAACCAACGGCCATTGCTAAGGATAAATATTTTGATTCTCGATATGGGTCTCCTAACCCTTATTCGCCTGCACAGTTTGCTACTCTGCACGATCTTGACGTTCTTGATCAGTTACAACGTTTTTCTATCGACGGTAAAGATCTTGCAAGCATTGTCCTTCATGAATCAATGGGATCGGATACAAAGGAAGAAAGTTATTCTCAAAGCAATGATTCGAGAATGTTTCAAATTTACAAGGAAATTGCATCTCATCGTCAAGAAAACTCATCCATTACATCTTACTTCACAAAGCTCGAGGCATTATGGAATGAACTCGCCACCTTCAATACCGATTTGCCTCAATGTTCTTGCGGTGGTGTAACTGAAAAGCTAAGTGAGTATATGGAGAGAGAAAGGGTTATGCAATTTCTTGTGGGACTAAACGATTCTTATTCCAAAATGTGCAACCAAATCCTTATTACCCCTCCATTTCCAACGGTGGAGAAAGCCTATTATGCAATTATTCGAGAAGAAAAACGTAGGGAATTGCTTGCTGCATTAGAAACTGTTGCGGAAAAAGTAATTCAAAACAATTGGCTTGATCTTCAGAATCAGAATGCTCATTCCAACAATGGTGATAACTATGATGGTGTTCAAGGATTAGTTGATAGTAATAATCTTCACCAGCACCAATTTGATCAAAATCTAGTTACAAGCTTCCCCATTGACCCATTGCTAACAGACCTTGGATCTCCTGTGCGATGCTAA

Protein sequence

MVLRGIISPPRFRSSPREGRSHNNATINPPSKPTSKKPNNHNNPNRSQRKETQLTATRPTKSNNVNTSSKNTSRINPSTKPTSKLVSSNPSHKKLENNSTTKIHPSKRTRPTSSKSNVKGEIAIGSGSRSELSSAGKPTAIAKDKYFDSRYGSPNPYSPAQFATLHDLDVLDQLQRFSIDGKDLASIVLHESMGSDTKEESYSQSNDSRMFQIYKEIASHRQENSSITSYFTKLEALWNELATFNTDLPQCSCGGVTEKLSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPTVEKAYYAIIREEKRRELLAALETVAEKVIQNNWLDLQNQNAHSNNGDNYDGVQGLVDSNNLHQHQFDQNLVTSFPIDPLLTDLGSPVRC

Homology

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BLAST of Cla97C03G055550 vs. NCBI nr
Match: XP_022954810.1 (serine/arginine repetitive matrix protein 1-like [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 201/416 (48.32%), Postives = 232/416 (55.77%), Query Frame = 0


Query: 2   VLRGIISPPRFRSSPREGRS-HNNATINPPSKPT----SKKXXXXXXXXXXXXXXXXXXX 61
           ++RGIISPPR RSSPRE R  +NN   NPPS+P      ++                   
Sbjct: 1   MVRGIISPPRSRSSPRESRPFNNNGATNPPSRPNYMSPRRRPTTPINPNELRTHRKEPQP 60

Query: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKIHPSKRT-----RP 121
                                       XXXXXX          TK  P   T     RP
Sbjct: 61  TVVKRPTKPTDRSSNPPRIDPSRPNSKLXXXXXXAPSPNERKLDTKTAPKTTTRFSSPRP 120

Query: 122 TS-----SKSNVKGEIAIGSGSRSELSSAGKPTAIAKDKYFDSRYGSPN---------PY 181
           T      SKSN KG  A GSGSRS+ S A KP+   K    + R G  N          Y
Sbjct: 121 TKPITPPSKSNGKG--ASGSGSRSDFSRA-KPSDSQKGTPKNLRSGRLNDQQDEQIVRSY 180

Query: 182 SPAQFA--TLHDLDVLDQLQRFSIDGKDLASIVLH-----ESMGSDTKEESYSQ--SNDS 241
           S   +   TL D DV  +L + S+D KDLA+IVLH     ES+ S+TKEE  S   +N S
Sbjct: 181 SDGSYGARTLSDPDV-HKLHQLSLDDKDLANIVLHANLVYESLASETKEEECSSQGNNSS 240

Query: 242 RMFQIYKEIASHRQENSSITSYFTKLEALWNELATFNTDLPQCSCGGVTEKLSEYMERER 301
           RMFQIYKEIASH Q NSSITSY TKL+ALW+EL  +  D P+CSCG  TEK SE +ERE+
Sbjct: 241 RMFQIYKEIASHHQGNSSITSYITKLKALWDELEAY-IDTPKCSCGS-TEKQSEQIEREK 300

Query: 302 VMQFLVGLNDSYSKMCNQILITPPFPTVEKAYYAIIREEKRRELLAALETVAEKVIQNNW 361
           VMQFL+GLNDSYS +C QIL   PFPTVEKA  AI+REEKRREL+ +LE VA KVIQNNW
Sbjct: 301 VMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREEKRRELVLSLEIVAAKVIQNNW 360

Query: 362 LDLQNQNAHSNNGDNYDGVQGLVDSNNLHQHQFDQNLVTSFPIDPLLTDLGSPVRC 385
           L    QN HS NGDN +     VD  NL   + DQN   S PI+PLL DLGSPVRC
Sbjct: 361 L---LQNGHSINGDNEE-----VDHMNLQDLKADQNEAMSIPIEPLLIDLGSPVRC 402

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BLAST of Cla97C03G055550 vs. NCBI nr
Match: XP_022137024.1 (uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137026.1 uncharacterized protein LOC111008588 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 170/427 (39.81%), Postives = 219/427 (51.29%), Query Frame = 0


Query: 1   MVLRGIISPPRFRSSPREGRSHNNATINPPSKP---TSKKXXXXXXXXXXXXXXXXXXXX 60
           M LRG+ISPPR RSSPR+ R HNN   NPPS+P   + ++                    
Sbjct: 47  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATA 106

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKIHPSKRTRPTSSKSN 120
                                                       KI  +K + P +    
Sbjct: 107 TRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQPQR 166

Query: 121 VKGEIAIGSGSRSELSSAGKPTAIAKD----------------------------KYFDS 180
           ++  +    G          PT I+K+                            K+  S
Sbjct: 167 LRNGVEPPRG----------PTPISKNTXXXXXXXXXXXXXXXXXXXXXXXXXXSKHLPS 226

Query: 181 RYGSP-------NPYSPAQFATLHDLDVLDQLQRFSIDGKDLASIVLH-----ESMGSDT 240
              +        +PYS   +  L D  + + LQR SIDGKDLASI+LH     ES+GSDT
Sbjct: 227 PGSAQHHDMKNHSPYSGGTYTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDT 286

Query: 241 KEESYSQSNDSRMFQIYKEIASHRQENSSITSYFTKLEALWNELATFNTDLPQCSCGGVT 300
            EES+ QSN  R+FQIYK+IASHRQENSS+TSYFTKL+ LW+EL T++ D+PQC   G  
Sbjct: 287 MEESF-QSNAPRIFQIYKDIASHRQENSSVTSYFTKLKILWDELETYSDDVPQCCSCGAM 346

Query: 301 EKLSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPTVEKAYYAIIREEKRRELLAALE 360
           EKLS ++ERE+VMQFL+GLN+SYS +C QIL+  PFPT+EKAY  IIREEKR EL+ +LE
Sbjct: 347 EKLSGHVEREKVMQFLMGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLE 406

Query: 361 TVAEKVIQNNWLDLQNQNAHSNNGDNYDGVQGLVDSNNLHQHQFDQNLVTSFPIDPLLTD 385
            VA KV++N WL    QN  S+NG + DG+   V+ N       D   + SFP + LL D
Sbjct: 407 MVAAKVMENKWL---LQNDQSSNGYD-DGIHEEVNGNT-----EDNVEIPSFPNESLLID 453

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BLAST of Cla97C03G055550 vs. NCBI nr
Match: XP_023542694.1 (uncharacterized protein LOC111802521 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 6.1e-60
Identity = 176/414 (42.51%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 2   VLRGIISPPRFRSSPREGRS-HNNATINPPSKPT----SKKXXXXXXXXXXXXXXXXXXX 61
           ++RGIISPPR RSSPRE R  +NN   NPPS+P      ++                   
Sbjct: 1   MVRGIISPPRSRSSPRESRPFNNNGATNPPSRPNYMSPRRRPTTPINANELRTHRKEPQP 60

Query: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKIHPSKRTRPTSSKS 121
                                                       TK  P   TR +S + 
Sbjct: 61  TVVKRPTKPTDRSSNPPRIDPSRPNSKLVPSRPAAPSPNERKLDTKTAPKTTTRFSSPRP 120

Query: 122 NVKGEIAIGSGSRSELSSAGKPTAIAKDKYFDSRYGSP-----------------NPYSP 181
                                     + K  DS+ G+P                   YS 
Sbjct: 121 TKPIXXXXXXXXXXXXXXXXXXXXXXRAKPSDSQKGTPKNLRSGRLNDQQDEQIVRSYSD 180

Query: 182 AQFA--TLHDLDVLDQLQRFSIDGKDLASIVLH-----ESMGSDTKEESYSQ--SNDSRM 241
             +   TL D DV  +L + S+D KDLA+IVLH     ES+ S+TKEE  S   +N SRM
Sbjct: 181 GSYGARTLSDPDV-HKLHQLSLDDKDLANIVLHANLVYESLASETKEEECSSQGNNSSRM 240

Query: 242 FQIYKEIASHRQENSSITSYFTKLEALWNELATFNTDLPQCSCGGVTEKLSEYMERERVM 301
           FQIYKEIASH Q NSSITSY TKL+ALW+EL  +  D+P+CSCG  T+K SE +ERE+VM
Sbjct: 241 FQIYKEIASHHQGNSSITSYITKLKALWDELEAY-IDIPKCSCGS-TQKQSEEIEREKVM 300

Query: 302 QFLVGLNDSYSKMCNQILITPPFPTVEKAYYAIIREEKRRELLAALETVAEKVIQNNWLD 361
           QFL+GL+DSYS +C QIL   PFPTVEKA  AI+REEKRREL+ +LE VA KVIQNNWL 
Sbjct: 301 QFLIGLDDSYSTICAQILHMKPFPTVEKACCAILREEKRRELVLSLEIVAAKVIQNNWL- 360

Query: 362 LQNQNAHSNNGDNYDGVQGLVDSNNLHQHQFDQNLVTSFPIDPLLTDLGSPVRC 385
              QN HS NGDN +     VD  NL + + DQN   S PI+PLL DLGSPVRC
Sbjct: 361 --LQNGHSINGDNEE-----VDHMNLQELKADQNEAMSVPIEPLLIDLGSPVRC 403

[Close]

BLAST of Cla97C03G055550 vs. NCBI nr
Match: XP_022137569.1 (uncharacterized protein LOC111008986 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 7.5e-34
Identity = 120/312 (38.46%), Postives = 146/312 (46.79%), Query Frame = 0


Query: 4   RGIISPPRFRSSPREGRSHNNATINPPSKPT--SKKXXXXXXXXXXXXXXXXXXXXXXXX 63
           RG+ISPP+ R S  E  S NNA  NPPS P   S                          
Sbjct: 7   RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFG 66

Query: 64  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKIHPSKRTRPTSSKSNVKGE 123
                                                  TK+  +K T  TS  SNV G 
Sbjct: 67  SNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKIT--TSRNSNVNGV 126

Query: 124 IAIGSGSRSELSSAGKPTAIAKDKYFDSRYGSPNPYSPAQFATLHDLDVLDQLQRFSIDG 183
                G    L S    ++                        +    V++QLQ+ SIDG
Sbjct: 127 QQQPRG--PTLISVASGSSHGSXXXXXXXXXXXXXXXXXXXXVIGHPHVINQLQQLSIDG 186

Query: 184 KDLASIV-----LHESMGSDTKEESYSQSNDSRMFQIYKEIASHRQENSSITSYFTKLEA 243
           K  A +V     + ES+G  TKEE   QSN  R+ +IYK+IASHRQ NSSITSYFTKLE 
Sbjct: 187 KHHAKMVFRANSMDESVGPYTKEECSPQSNAERILEIYKDIASHRQGNSSITSYFTKLET 246

Query: 244 LWNELATFNTDLPQ-CSCGGVTEKLSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPT 303
           LW EL T+ +DLPQ CS     +K S+ +ERE+VMQFLVGLNDSYS +C+QIL+  PFPT
Sbjct: 247 LWEELETY-SDLPQCCSYSATDQKPSKLVEREKVMQFLVGLNDSYSTICSQILLIRPFPT 306

Query: 304 VEKAYYAIIREE 308
           VEKAY  II +E
Sbjct: 307 VEKAYSIIIMQE 313

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BLAST of Cla97C03G055550 vs. NCBI nr
Match: XP_022137556.1 (uncharacterized protein LOC111008978 [Momordica charantia])

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-33
Identity = 82/146 (56.16%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 182 KDLASIVLHES-----MGSDTKEESYSQSNDSRMFQIYKEIASHRQENSSITSYFTKLEA 241
           K +A+IVL E+     +GS+TK+E  SQSNDS +FQIYK  ASHRQ++SS+TSYF KL+ 
Sbjct: 219 KHVANIVLRENSIYKPVGSNTKQEWSSQSNDSEIFQIYKGFASHRQKSSSVTSYFKKLKI 278

Query: 242 LWNELATFNTDLPQCSCGGVTEKLSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPTV 301
           LW++L  + +DLPQC   G  +KLSE++ERE+V+QFLVGLNDSYS + +QIL   P PTV
Sbjct: 279 LWDQLRNY-SDLPQCYSLGAKQKLSEHVEREKVIQFLVGLNDSYSTIVSQILQIRPLPTV 338

Query: 302 EKAYYAIIREEKRRELLAALETVAEK 323
           EKAY+  I+EEK+R L + L+ + +K
Sbjct: 339 EKAYFLTIQEEKQRALNSPLKLLQQK 363

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BLAST of Cla97C03G055550 vs. TrEMBL
Match: tr|A0A0A0LRE6|A0A0A0LRE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.2e-33
Identity = 96/208 (46.15%), Postives = 136/208 (65.38%), Query Frame = 0


Query: 155 NPYSPAQFATLHDL-DVLDQLQRFSIDGKDLASIV----LHESMGSDTKEESYSQSNDSR 214
           +P+SP    + HD+ D L  LQR S +GKDL  I+    + + MGS+ ++E  S  N S 
Sbjct: 160 DPHSPGYSDSSHDIGDRL--LQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSS 219

Query: 215 M--FQIYKEIASHRQENSSITSYFTKLEALWNELATFNTDLPQCSCGGVTEKLSEYMERE 274
           +   QIY++IASHRQ N S+  YF KL+ LWN++  ++++    S  G+    SE  ER+
Sbjct: 220 LAILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYSSE----SVEGIA-FWSELTERD 279

Query: 275 RVMQFLVGLNDSYSKMCNQILITPPFPTVEKAYYAIIREEKRRELLAALETVAEKVIQNN 334
           +V+QF +GLND YS +C+QIL+  PFPTVE+AY  IIREEKRREL  AL TVA +VIQ++
Sbjct: 280 KVIQFFIGLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSS 339

Query: 335 WLDLQNQNAHSNNGDNYD-GVQGLVDSN 355
           +     QN  SNNGDN + G+   +D++
Sbjct: 340 Y-----QNGSSNNGDNKNLGIDQEIDTS 355

[Close]

BLAST of Cla97C03G055550 vs. TrEMBL
Match: tr|A0A0A0LU31|A0A0A0LU31_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 103/239 (43.10%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 112 TSSKSNVKGEIAIGSGSRSELSSAGKPTAIAKDKYFDSRYGSPNPYSPAQFATLHDLDVL 171
           +SSK+NV   I   + +  + S    PT+   D +  +   +  P SPA     +D+   
Sbjct: 130 SSSKNNVVRRIY--NDNSPKASPKISPTS-GSDCHEKAVKTTAYPNSPASSDPSNDIG-H 189

Query: 172 DQLQRFSIDGKDLASIV----LHESMGSDTKEESYSQSNDSRM--FQIYKEIASHRQENS 231
             LQ  S +GKDL  I+    + + MGS+ K+E  S  N S +   QIY++IASHRQ N 
Sbjct: 190 RLLQGLSFEGKDLDDILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNL 249

Query: 232 SITSYFTKLEALWNELATFNTDLPQ-CSCGGVTEKLSEYMERERVMQFLVGLNDSYSKMC 291
           S+  YF KL+ LWN++ T+++D  Q  S  G     SE  ER++VMQF +GLND YS +C
Sbjct: 250 SVERYFKKLKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIIC 309

Query: 292 NQILITPPFPTVEKAYYAIIREEKRRELLAALETVAEKVIQNNWLDLQNQNAHSNNGDN 344
           +QIL+  PFPTVE+AY  IIREEKRREL  AL  +A +VIQ+++     Q   SNNGDN
Sbjct: 310 SQILVNQPFPTVEEAYSEIIREEKRRELFVALGIMAAQVIQSSY-----QYGSSNNGDN 359

[Close]

BLAST of Cla97C03G055550 vs. TrEMBL
Match: tr|A0A0A0LRX9|A0A0A0LRX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059720 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24
Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 0


Query: 145 KYFDSRYGSPNPYSPAQFATLHDLDVLDQLQRFSIDGKDL-ASIVLHESMGSDTKEESYS 204
           K+ DS   SP+P   A     + L  L   +   +   ++  S  +H+S+ SDT  E ++
Sbjct: 57  KFSDSPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHN 116

Query: 205 QSNDS--RMFQIYKEIASHRQENSSITSYFTKLEALWNELA--TFNTDLPQCSCGGVTEK 264
             ++S   + +IY+ IASHR+ N+SI SYF  L+ALWNE A  + N + PQ S     E+
Sbjct: 117 SESNSPTMLLKIYELIASHRKGNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEE 176

Query: 265 LSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPTVEKAYYAIIREEKRRE 312
            SE+MERE++MQFL+GLNDSYS +C+QIL   P PTV++AY  I+ E+K R+
Sbjct: 177 RSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQKTRK 228

[Close]

BLAST of Cla97C03G055550 vs. TrEMBL
Match: tr|A5BC87|A5BC87_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006992 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.4e-22
Identity = 59/130 (45.38%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 183 DLASIVLHESMGSD---TKEESYSQSNDSRMFQIYKEIASHRQENSSITSYFTKLEALWN 242
           D+AS V++    S+      E +SQ NDSR++QI ++I  HRQ   SI+ Y+TKL+A W+
Sbjct: 95  DIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLKAFWD 154

Query: 243 ELATFNTDLPQCSCGGVTEKLSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPTVEKA 302
           EL++++ ++  CSCGG+ EKL E  E+ERVMQFL+GLNDSY+ +  QIL+  P P   + 
Sbjct: 155 ELSSYH-EVLSCSCGGL-EKLKEMDEKERVMQFLMGLNDSYAAIRGQILLMQPLPDTRRV 214

Query: 303 YYAIIREEKR 310
           Y  ++++EK+
Sbjct: 215 YSLVLQQEKQ 222

[Close]

BLAST of Cla97C03G055550 vs. TrEMBL
Match: tr|A0A2I4FG43|A0A2I4FG43_9ROSI (uncharacterized protein LOC108998522 OS=Juglans regia OX=51240 GN=LOC108998522 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.7e-21
Identity = 55/134 (41.04%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 182 KDLASIVLHESMGSDT---KEESYSQSNDSRMFQIYKEIASHRQENSSITSYFTKLEALW 241
           K++AS +L+  + +D     +E +SQ N  R+FQ+ K I+S  QE  S++ YFT+L+A W
Sbjct: 97  KNIASSILYIDVAADVWKDLQEHFSQRNRPRIFQLKKAISSLTQEQQSVSDYFTQLKAYW 156

Query: 242 NELATFNTDLPQCSCGGVTEKLSEYMERERVMQFLVGLNDSYSKMCNQILITPPFPTVEK 301
           +ELA +   LPQC+C G+ +K  E+ + E +MQFL+GLNDS++ +  QIL+  P P++ +
Sbjct: 157 DELANYR-QLPQCTC-GIVKKFLEFQQEEYIMQFLMGLNDSFTSIRGQILLLDPLPSMNQ 216

Query: 302 AYYAIIREEKRREL 313
            +  +++EEK+RE+
Sbjct: 217 VFSLVVQEEKQREI 228

[Close]

BLAST of Cla97C03G055550 vs. TAIR10
Match: AT1G21280.1 (Retrotransposon gag protein (InterPro:IPR005162))

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-09
Identity = 43/164 (26.22%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 146 YFDSRYGSPNPYSPAQFATLHDLDVLDQLQRFSIDGKDLASIVLHES---MGSDTKEESY 205
           + D     P+P+SP          ++      S+  K L S++  E+   M  D +   +
Sbjct: 61  FIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLR-RVF 120

Query: 206 SQSNDSRMFQIYKEIASHRQENSSITSYFTKLEALWNELATFNTDLPQCSCGG----VTE 265
               D +++Q+ + +A+ RQ   S+  YF KL  +W EL+ +   +P+C CGG     T+
Sbjct: 121 VPCVDLKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEY-APIPECKCGGCNCECTK 180

Query: 266 KLSEYMERERVMQFLVG--LNDSYSKMCNQILITPPFPTVEKAY 301
           +  E  E+E+  +FL+G  LN  +  +  +I+   P P++ +A+
Sbjct: 181 RAEEAREKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAF 222

The following BLAST results are available for this feature:

BLAST of Cla97C03G055550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954810.1	2.6e-66	48.32	serine/arginine repetitive matrix protein 1-like [Cucurbita moschata]	[more]
XP_022137024.1	1.6e-60	39.81	uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncha...	[more]
XP_023542694.1	6.1e-60	42.51	uncharacterized protein LOC111802521 [Cucurbita pepo subsp. pepo]	[more]
XP_022137569.1	7.5e-34	38.46	uncharacterized protein LOC111008986 [Momordica charantia]	[more]
XP_022137556.1	2.2e-33	56.16	uncharacterized protein LOC111008978 [Momordica charantia]	[more]

BLAST of Cla97C03G055550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRE6\|A0A0A0LRE6_CUCSA	4.2e-33	46.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1	[more]
tr\|A0A0A0LU31\|A0A0A0LU31_CUCSA	1.0e-31	43.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1	[more]
tr\|A0A0A0LRX9\|A0A0A0LRX9_CUCSA	1.2e-24	42.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059720 PE=4 SV=1	[more]
tr\|A5BC87\|A5BC87_VITVI	4.4e-22	45.38	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006992 PE=4 SV=1	[more]
tr\|A0A2I4FG43\|A0A2I4FG43_9ROSI	3.7e-21	41.04	uncharacterized protein LOC108998522 OS=Juglans regia OX=51240 GN=LOC108998522 P...	[more]

BLAST of Cla97C03G055550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C03G055550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21280.1	2.1e-09	26.22	Retrotransposon gag protein (InterPro:IPR005162)	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G055550.1	Cla97C03G055550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..136
None	No IPR available	PANTHER	PTHR37610:SF2	SUBFAMILY NOT NAMED	coord: 199..309
None	No IPR available	PANTHER	PTHR37610	FAMILY NOT NAMED	coord: 199..309

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G055550	Csa1G058670	Cucumber (Chinese Long) v2	cuwmbB032
Cla97C03G055550	MELO3C002435	Melon (DHL92) v3.5.1	mewmbB155
Cla97C03G055550	ClCG03G004370	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G055550	CSPI01G10370	Wild cucumber (PI 183967)	cpiwmbB041
Cla97C03G055550	CSPI01G10310	Wild cucumber (PI 183967)	cpiwmbB032
Cla97C03G055550	Cucsa.085580	Cucumber (Gy14) v1	cgywmbB092
Cla97C03G055550	CmaCh18G002740	Cucurbita maxima (Rimu)	cmawmbB417
Cla97C03G055550	CmoCh18G002570	Cucurbita moschata (Rifu)	cmowmbB394
Cla97C03G055550	CsGy1G010300	Cucumber (Gy14) v2	cgybwmbB032
Cla97C03G055550	MELO3C002428.2	Melon (DHL92) v3.6.1	medwmbB145
Cla97C03G055550	MELO3C002435.2	Melon (DHL92) v3.6.1	medwmbB144
Cla97C03G055550	Carg06838	Silver-seed gourd	carwmbB0517
Cla97C03G055550	CsaV3_1G010350	Cucumber (Chinese Long) v3	cucwmbB030
Cla97C03G055550	CsaV3_1G010460	Cucumber (Chinese Long) v3	cucwmbB040
Cla97C03G055550	Bhi08G001474	Wax gourd	wgowmbB473

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G055550	Cucumber (Gy14) v1	cgywmbB221
Cla97C03G055550	Cucurbita maxima (Rimu)	cmawmbB227
Cla97C03G055550	Cucurbita moschata (Rifu)	cmowmbB211
Cla97C03G055550	Bottle gourd (USVL1VR-Ls)	lsiwmbB176
Cla97C03G055550	Melon (DHL92) v3.5.1	mewmbB156
Cla97C03G055550	Melon (DHL92) v3.5.1	mewmbB158
Cla97C03G055550	Watermelon (97103) v1	wmwmbB124
Cla97C03G055550	Silver-seed gourd	carwmbB1060