CSPI01G10310 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G10310
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr1 : 6459339 .. 6461315 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCGTATTTAATTAAGGGGGGGAAGTAGTGAAGGTTTGGGCATTTGACATATAGCCCCAAAATAAAAAGACTCCACTTAATTCATTTTCCATCTGATCAAAGAATTGGGAAAAGTTAAAGGGAGAAAAATGGACGAAAGAGGAATTATGGGTCCAAAAAGATCTCAATTTTCTCCAAAACCAAACAGGAAGCCTATTGATCCAGAGGCTAAAAAATCTGCAAAGAAAAATCCAAAAAAAGATCCCAATTTTCCCAGCTCTTCAAAGCCAAAGCCACAAGCTGCAGCAACCAATCCTAATTCTAACGGCAACAAAACTAATCCCAACTCCGAGACACCTTCTTCTGCTCCACCTCCACCTCCGACTCCGATTTCAACTCCAAAAGCAAAAAGTCAACCTCCCACGCCTTCTTCTGATCATCATCCACCTCTACCTCAGAATCTGAGTCCGCCTCGAAGATCAAAAAGTCAACCCGCCACGCCTTCTTCTGCTTCAAAGATCAACTTTGTAAGACGTATTGATAATGATAATTCTACAAAAGCTTTTCCCAAGACTTCGCCCACCTCTGGGTCAGATCATCGTCAGAAACATGTCAAAACTACTGCTGATCCTCATTCCCCTGGATATTCTGATTCTTCTCATGATATTGGTGATCGGTTGTTACAACGCCTTTCTTCTGAAGGTCAGTTTGATATTTCTTCACACCTTTTTTTTTTCTCTTTTGTAAATTTTTACGGTCATTGAAATGTGTAAGCCCTTTCACACACACCAATATTTATTAATTAAATAACAATATTTTTAAAAAAATGTAAATACAAACCTATTAGTGATAGATGATAGTTAGTATACCATTGTTTATCGGTGATATTTTAATATATTTGTAAATATTATGGTTTATTTTGCTATATTTGAAAATAACTCATAACAAAATCTATCATTAGACTCTCTGTTAGCATAATAATCTATCACAAGTATCAATAATGCTAAAAGCTAGATCTAATTGTGAGACTTTAGAGGGGTTCAGTATACATAAAAGTCAAATAATTTAAAGATAATAGGTTAACTAATGTTTAAAATATTTGAATTTGTCATACATCTTTTGAAATGTCATACTGAATTTTAAGTAAAAGTAAATAAATCTTTTATGAAAATTATTTTCAAATAACAAATTTCTTAAATATATCGTAACATGACTACGTGTGTCTTATCATACTTCGTATAGACATATATAATAGTCTATTGATGATGATATTTTGTTATATTTTATTTTATTTAGTATAGATGGTTAGTTTTATAATTCATTACCCTGCTTAAAAAGTGTATAGTTTTGTTGTACTTATACAATTATGTCATGTTTCATCAAGTTATTAATAATCTCTTCGTGATCCACTGAATATTCTTGATAGATGTGTTTTAAATCTTTTACTCGTGGATAAAAAAACAAAAATTAACATGTGTAGGTAAAGACCTTGATGACATCCTCAAAGGAAACACGATAGATGATTTAATGGGCTCAAATAACAGAAAGGAAGAATCTTCATCTCGAAATGTTTCTAGTTTGGCTATATTACAAATTTACCAGAAAATTGCATCCCATCGACAAGGAAACTTATCCGTTGAACGTTACTTCAAAAAGCTCAAGAAATTATGGAATGATATTGGAATCTATAGCAGTGAGTTTGTTGAAGGAATTGCATTTTGGAGTGAGCTTACAGAAAGAGACAAAGTTATTCAATTTTTTATTGGACTAAATGATTATTATTCCATAATTTGCTCCCAAATCCTTGTTAACCAGCCATTCCCAACAGTGGAGGAAGCTTATTCTGAAATAATTCGAGAAGAAAAACGTAGAGAATTGTTTGTTGCATTAGGAACTGTGGCGGCACAAGTGATTCAAAGTAGTTACCAGAATGGTTCATCCAACAATGGTGATAATAAAAACCTTGGAATTGATCAAGAAATTGACACAAGTATTTAA

mRNA sequence

ATGGACGAAAGAGGAATTATGGGTCCAAAAAGATCTCAATTTTCTCCAAAACCAAACAGGAAGCCTATTGATCCAGAGGCTAAAAAATCTGCAAAGAAAAATCCAAAAAAAGATCCCAATTTTCCCAGCTCTTCAAAGCCAAAGCCACAAGCTGCAGCAACCAATCCTAATTCTAACGGCAACAAAACTAATCCCAACTCCGAGACACCTTCTTCTGCTCCACCTCCACCTCCGACTCCGATTTCAACTCCAAAAGCAAAAAGTCAACCTCCCACGCCTTCTTCTGATCATCATCCACCTCTACCTCAGAATCTGAGTCCGCCTCGAAGATCAAAAAGTCAACCCGCCACGCCTTCTTCTGCTTCAAAGATCAACTTTGTAAGACGTATTGATAATGATAATTCTACAAAAGCTTTTCCCAAGACTTCGCCCACCTCTGGGTCAGATCATCGTCAGAAACATGTCAAAACTACTGCTGATCCTCATTCCCCTGGATATTCTGATTCTTCTCATGATATTGGTGATCGGTTGTTACAACGCCTTTCTTCTGAAGGTAAAGACCTTGATGACATCCTCAAAGGAAACACGATAGATGATTTAATGGGCTCAAATAACAGAAAGGAAGAATCTTCATCTCGAAATGTTTCTAGTTTGGCTATATTACAAATTTACCAGAAAATTGCATCCCATCGACAAGGAAACTTATCCGTTGAACGTTACTTCAAAAAGCTCAAGAAATTATGGAATGATATTGGAATCTATAGCAGTGAGTTTGTTGAAGGAATTGCATTTTGGAGTGAGCTTACAGAAAGAGACAAAGTTATTCAATTTTTTATTGGACTAAATGATTATTATTCCATAATTTGCTCCCAAATCCTTGTTAACCAGCCATTCCCAACAGTGGAGGAAGCTTATTCTGAAATAATTCGAGAAGAAAAACGTAGAGAATTGTTTGTTGCATTAGGAACTGTGGCGGCACAAGTGATTCAAAGTAGTTACCAGAATGGTTCATCCAACAATGGTGATAATAAAAACCTTGGAATTGATCAAGAAATTGACACAAGTATTTAA

Coding sequence (CDS)

ATGGACGAAAGAGGAATTATGGGTCCAAAAAGATCTCAATTTTCTCCAAAACCAAACAGGAAGCCTATTGATCCAGAGGCTAAAAAATCTGCAAAGAAAAATCCAAAAAAAGATCCCAATTTTCCCAGCTCTTCAAAGCCAAAGCCACAAGCTGCAGCAACCAATCCTAATTCTAACGGCAACAAAACTAATCCCAACTCCGAGACACCTTCTTCTGCTCCACCTCCACCTCCGACTCCGATTTCAACTCCAAAAGCAAAAAGTCAACCTCCCACGCCTTCTTCTGATCATCATCCACCTCTACCTCAGAATCTGAGTCCGCCTCGAAGATCAAAAAGTCAACCCGCCACGCCTTCTTCTGCTTCAAAGATCAACTTTGTAAGACGTATTGATAATGATAATTCTACAAAAGCTTTTCCCAAGACTTCGCCCACCTCTGGGTCAGATCATCGTCAGAAACATGTCAAAACTACTGCTGATCCTCATTCCCCTGGATATTCTGATTCTTCTCATGATATTGGTGATCGGTTGTTACAACGCCTTTCTTCTGAAGGTAAAGACCTTGATGACATCCTCAAAGGAAACACGATAGATGATTTAATGGGCTCAAATAACAGAAAGGAAGAATCTTCATCTCGAAATGTTTCTAGTTTGGCTATATTACAAATTTACCAGAAAATTGCATCCCATCGACAAGGAAACTTATCCGTTGAACGTTACTTCAAAAAGCTCAAGAAATTATGGAATGATATTGGAATCTATAGCAGTGAGTTTGTTGAAGGAATTGCATTTTGGAGTGAGCTTACAGAAAGAGACAAAGTTATTCAATTTTTTATTGGACTAAATGATTATTATTCCATAATTTGCTCCCAAATCCTTGTTAACCAGCCATTCCCAACAGTGGAGGAAGCTTATTCTGAAATAATTCGAGAAGAAAAACGTAGAGAATTGTTTGTTGCATTAGGAACTGTGGCGGCACAAGTGATTCAAAGTAGTTACCAGAATGGTTCATCCAACAATGGTGATAATAAAAACCTTGGAATTGATCAAGAAATTGACACAAGTATTTAA

Homology

[Close]

BLAST of CSPI01G10310 vs. TrEMBL
Match: A0A0A0LRE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058680 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 1.0e-189
Identity = 354/356 (99.44%), Postives = 354/356 (99.44%), Query Frame = 1


Query: 1   MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATNPNSNG 60
           MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATNPNSNG
Sbjct: 1   MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATNPNSNG 60

Query: 61  NKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPQNLSPPRRSKSQPATPSS 120
           NKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLP NLSPPRRSKSQPATPSS
Sbjct: 61  NKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPRRSKSQPATPSS 120

Query: 121 ASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQR 180
           ASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQR
Sbjct: 121 ASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQR 180

Query: 181 LSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERY 240
           LSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERY
Sbjct: 181 LSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERY 240

Query: 241 FKKLKKLWNDIGIYSSEFVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPT 300
           FKKLKKLWNDIGIYSSE VEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPT
Sbjct: 241 FKKLKKLWNDIGIYSSESVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPT 300

Query: 301 VEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGIDQEIDTSI 357
           VEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGIDQEIDTSI
Sbjct: 301 VEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGIDQEIDTSI 356

[Close]

BLAST of CSPI01G10310 vs. TrEMBL
Match: A0A0A0LU31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058670 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125
Identity = 269/368 (73.10%), Postives = 290/368 (78.80%), Query Frame = 1


Query: 4   RGIMGP--------KRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATN 63
           RGI  P        ++   SP   +KP D E K SA K+P+KDPNFPSSSKPKPQAAA N
Sbjct: 12  RGIFDPHFKSPVNRRKINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKPKPQAAARN 71

Query: 64  PNSNGNKTNPNSETPSSAPPPPPTPI-STPKAKSQPPTPSSDHHPPLPQNLSPPRRSKSQ 123
                  +NPNS +  S+P PPPTPI +T K KSQPPTPS    P      SP R++K Q
Sbjct: 72  -------SNPNSNSAPSSPAPPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQ 131

Query: 124 PATPSSASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIG 183
           P  PSS+SK N VRRI NDNS KA PK SPTSGSD  +K VKTTA P+SP  SD S+DIG
Sbjct: 132 PTMPSSSSKNNVVRRIYNDNSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIG 191

Query: 184 DRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGN 243
            RLLQ LS EGKDLDDILKGN+IDDLMGSNN+KEESS RNVSSLAILQIYQKIASHRQGN
Sbjct: 192 HRLLQGLSFEGKDLDDILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGN 251

Query: 244 LSVERYFKKLKKLWNDIGIYSSEFVEG------IAFWSELTERDKVIQFFIGLNDYYSII 303
           LSVERYFKKLKKLWNDIG YSS+F +G      IAFWSELTERDKV+QFFIGLNDYYSII
Sbjct: 252 LSVERYFKKLKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSII 311

Query: 304 CSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGI 357
           CSQILVNQPFPTVEEAYSEIIREEKRRELFVALG +AAQVIQSSYQ GSSNNGDNKNLGI
Sbjct: 312 CSQILVNQPFPTVEEAYSEIIREEKRRELFVALGIMAAQVIQSSYQYGSSNNGDNKNLGI 371

[Close]

BLAST of CSPI01G10310 vs. TrEMBL
Match: A0A0A0LRX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059720 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.0e-19
Identity = 68/186 (36.56%), Postives = 105/186 (56.45%), Query Frame = 1


Query: 143 SPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQRLSSEGKDLDDILKGN-----TI 202
           +P  GS H   H  + +  HSP    ++  +    L  LS    +++D++  N     +I
Sbjct: 48  TPKDGSSH---HKFSDSPNHSPSPVKTADHLLQNQLHHLSIH--EVNDVVANNVHQSRSI 107

Query: 203 DDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYS-- 262
              + S+   E+ +S + S   +L+IY+ IASHR+GN S++ YF+ LK LWN+    S  
Sbjct: 108 HKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRKGNTSIKSYFRNLKALWNEAAASSIN 167

Query: 263 -----SEFVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPTVEEAYSEIIR 317
                S     I   SE  ER+K++QF +GLND YS++CSQIL  +P PTV++AYS I+ 
Sbjct: 168 LNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVG 227

[Close]

BLAST of CSPI01G10310 vs. TrEMBL
Match: A0A151TMD2_CAJCA (Copia protein (Fragment) OS=Cajanus cajan GN=KK1_021823 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.9e-11
Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 1


Query: 220 ILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYSSEFVEGIAFWSELTERDKVIQFFI 279
           I Q+ ++IA   Q  L+V  Y+ KLKKLW+++G Y+    + +       +R K++QF +
Sbjct: 36  IFQLEKEIACLTQDQLTVAAYYTKLKKLWDELGSYN----DVVCTCGSNNKRRKLMQFLM 95

Query: 280 GLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVI 330
           GL++ YS++  Q+L+  P P V +AYS II+EEK+R L     T+ A  +
Sbjct: 96  GLDESYSVVRGQLLLMIPLPDVSQAYSFIIQEEKQRNLGTRRETIEASAM 141

[Close]

BLAST of CSPI01G10310 vs. TrEMBL
Match: A5ALL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001215 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.7e-11
Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1


Query: 220 ILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYSSEFVEGIAFWSELTERDKVIQFFI 279
           I +I ++IA HRQ  LS+  Y+ KLK LW+++  Y+       A      ++ +++QF +
Sbjct: 151 IFEIQREIAYHRQEQLSISVYYTKLKSLWDELASYND------ASSGAQQDQQRLMQFLM 210

Query: 280 GLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTV-----AAQVIQSS-Y 339
           GLN+ YS I  QIL+  P P++ +AYS + +EEK+R L     T      AA  ++S+  
Sbjct: 211 GLNESYSAIRGQILLMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQM 270

Query: 340 QNGSSNN 341
           +N S+ N
Sbjct: 271 KNNSAGN 271

[Close]

BLAST of CSPI01G10310 vs. NCBI nr
Match: gi|778658332|ref|XP_011652531.1| (PREDICTED: protein ENL-like [Cucumis sativus])

HSP 1 Score: 670.6 bits (1729), Expect = 1.5e-189
Identity = 354/356 (99.44%), Postives = 354/356 (99.44%), Query Frame = 1


Query: 1   MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATNPNSNG 60
           MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATNPNSNG
Sbjct: 1   MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATNPNSNG 60

Query: 61  NKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPQNLSPPRRSKSQPATPSS 120
           NKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLP NLSPPRRSKSQPATPSS
Sbjct: 61  NKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPRRSKSQPATPSS 120

Query: 121 ASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQR 180
           ASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQR
Sbjct: 121 ASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQR 180

Query: 181 LSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERY 240
           LSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERY
Sbjct: 181 LSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERY 240

Query: 241 FKKLKKLWNDIGIYSSEFVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPT 300
           FKKLKKLWNDIGIYSSE VEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPT
Sbjct: 241 FKKLKKLWNDIGIYSSESVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPT 300

Query: 301 VEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGIDQEIDTSI 357
           VEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGIDQEIDTSI
Sbjct: 301 VEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGIDQEIDTSI 356

[Close]

BLAST of CSPI01G10310 vs. NCBI nr
Match: gi|700209388|gb|KGN64484.1| (hypothetical protein Csa_1G058670 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 2.6e-125
Identity = 269/368 (73.10%), Postives = 290/368 (78.80%), Query Frame = 1


Query: 4   RGIMGP--------KRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATN 63
           RGI  P        ++   SP   +KP D E K SA K+P+KDPNFPSSSKPKPQAAA N
Sbjct: 12  RGIFDPHFKSPVNRRKINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKPKPQAAARN 71

Query: 64  PNSNGNKTNPNSETPSSAPPPPPTPI-STPKAKSQPPTPSSDHHPPLPQNLSPPRRSKSQ 123
                  +NPNS +  S+P PPPTPI +T K KSQPPTPS    P      SP R++K Q
Sbjct: 72  -------SNPNSNSAPSSPAPPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQ 131

Query: 124 PATPSSASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIG 183
           P  PSS+SK N VRRI NDNS KA PK SPTSGSD  +K VKTTA P+SP  SD S+DIG
Sbjct: 132 PTMPSSSSKNNVVRRIYNDNSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIG 191

Query: 184 DRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGN 243
            RLLQ LS EGKDLDDILKGN+IDDLMGSNN+KEESS RNVSSLAILQIYQKIASHRQGN
Sbjct: 192 HRLLQGLSFEGKDLDDILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGN 251

Query: 244 LSVERYFKKLKKLWNDIGIYSSEFVEG------IAFWSELTERDKVIQFFIGLNDYYSII 303
           LSVERYFKKLKKLWNDIG YSS+F +G      IAFWSELTERDKV+QFFIGLNDYYSII
Sbjct: 252 LSVERYFKKLKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSII 311

Query: 304 CSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGI 357
           CSQILVNQPFPTVEEAYSEIIREEKRRELFVALG +AAQVIQSSYQ GSSNNGDNKNLGI
Sbjct: 312 CSQILVNQPFPTVEEAYSEIIREEKRRELFVALGIMAAQVIQSSYQYGSSNNGDNKNLGI 371

[Close]

BLAST of CSPI01G10310 vs. NCBI nr
Match: gi|778664840|ref|XP_011648413.1| (PREDICTED: early nodulin-20-like [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 7.3e-35
Identity = 110/192 (57.29%), Postives = 126/192 (65.62%), Query Frame = 1


Query: 4   RGIMGP--------KRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKPQAAATN 63
           RGI  P        ++   SP   +KP D E K SA K+P+KDPNFPSSSKPKPQAAA N
Sbjct: 12  RGIFDPHFKSPVNRRKINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKPKPQAAARN 71

Query: 64  PNSNGNKTNPNSETPSSAPPPPPTPI-STPKAKSQPPTPSSDHHPPLPQNLSPPRRSKSQ 123
                  +NPNS +  S+P PPPTPI +T K KSQPPTPS    P      SP R++K Q
Sbjct: 72  -------SNPNSNSAPSSPAPPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQ 131

Query: 124 PATPSSASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDIG 183
           P  PSS+SK N VRRI NDNS KA PK SPTSGSD  +K VKTTA P+SP  SD S+DIG
Sbjct: 132 PTMPSSSSKNNVVRRIYNDNSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIG 191

Query: 184 DRLLQRLSSEGK 187
            RLLQ LS EG+
Sbjct: 192 HRLLQGLSFEGQ 196

[Close]

BLAST of CSPI01G10310 vs. NCBI nr
Match: gi|700209397|gb|KGN64493.1| (hypothetical protein Csa_1G059720 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 4.3e-19
Identity = 68/186 (36.56%), Postives = 105/186 (56.45%), Query Frame = 1


Query: 143 SPTSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQRLSSEGKDLDDILKGN-----TI 202
           +P  GS H   H  + +  HSP    ++  +    L  LS    +++D++  N     +I
Sbjct: 48  TPKDGSSH---HKFSDSPNHSPSPVKTADHLLQNQLHHLSIH--EVNDVVANNVHQSRSI 107

Query: 203 DDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYS-- 262
              + S+   E+ +S + S   +L+IY+ IASHR+GN S++ YF+ LK LWN+    S  
Sbjct: 108 HKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRKGNTSIKSYFRNLKALWNEAAASSIN 167

Query: 263 -----SEFVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPTVEEAYSEIIR 317
                S     I   SE  ER+K++QF +GLND YS++CSQIL  +P PTV++AYS I+ 
Sbjct: 168 LNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVG 227

[Close]

BLAST of CSPI01G10310 vs. NCBI nr
Match: gi|778658349|ref|XP_011652556.1| (PREDICTED: uncharacterized protein LOC105435030 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 5.2e-17
Identity = 82/244 (33.61%), Postives = 124/244 (50.82%), Query Frame = 1


Query: 87  KSQPPTPSSDHHPPLPQNLSPPRRSKSQPATPSSASKIN--FVRRIDNDNSTKAFPKTSP 146
           +S P     DH   L   +S P  S    ATP+S   +     + I      K     +P
Sbjct: 11  RSNPRKTPPDH---LSGTISAPE-STIHLATPTSHQHLTKAATQPISLQTRKKKAGIATP 70

Query: 147 TSGSDHRQKHVKTTADPHSPGYSDSSHDIGDRLLQRLSSEGKDLDDILKGN-----TIDD 206
             GS H   H  + +  HSP    ++  +    L  LS    +++D++  N     +I  
Sbjct: 71  KDGSSH---HKFSDSPNHSPSPVKTADHLLQNQLHHLSIH--EVNDVVANNVHQSRSIHK 130

Query: 207 LMGSNNRKEESSSRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWNDIGIYS---- 266
            + S+   E+ +S + S   +L+IY+ IASHR+GN S++ YF+ LK LWN+    S    
Sbjct: 131 SVSSDTIIEQHNSESNSPTMLLKIYELIASHRKGNTSIKSYFRNLKALWNEAAASSINLN 190

Query: 267 ---SEFVEGIAFWSELTERDKVIQFFIGLNDYYSIICSQILVNQPFPTVEEAYSEIIREE 317
              S     I   SE  ER+K++QF +GLND YS++CSQIL  +P PTV++AYS I+ E+
Sbjct: 191 SPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQ 245

The following BLAST results are available for this feature:

BLAST of CSPI01G10310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G10310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRE6_CUCSA	1.0e-189	99.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058680 PE=4 SV=1	[more]
A0A0A0LU31_CUCSA	1.8e-125	73.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058670 PE=4 SV=1	[more]
A0A0A0LRX9_CUCSA	3.0e-19	36.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059720 PE=4 SV=1	[more]
A0A151TMD2_CAJCA	3.9e-11	37.27	Copia protein (Fragment) OS=Cajanus cajan GN=KK1_021823 PE=4 SV=1	[more]
A5ALL8_VITVI	6.7e-11	35.43	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001215 PE=4 SV=1	[more]

BLAST of CSPI01G10310 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI01G10310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658332\|ref\|XP_011652531.1\|	1.5e-189	99.44	PREDICTED: protein ENL-like [Cucumis sativus]	[more]
gi\|700209388\|gb\|KGN64484.1\|	2.6e-125	73.10	hypothetical protein Csa_1G058670 [Cucumis sativus]	[more]
gi\|778664840\|ref\|XP_011648413.1\|	7.3e-35	57.29	PREDICTED: early nodulin-20-like [Cucumis sativus]	[more]
gi\|700209397\|gb\|KGN64493.1\|	4.3e-19	36.56	hypothetical protein Csa_1G059720 [Cucumis sativus]	[more]
gi\|778658349\|ref\|XP_011652556.1\|	5.2e-17	33.61	PREDICTED: uncharacterized protein LOC105435030 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G10310.1	CSPI01G10310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 220..344 score: 5.6
None	No IPR available	PANTHER	PTHR34222:SF2	SUBFAMILY NOT NAMED	coord: 220..344 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G10310	Cla019355	Watermelon (97103) v1	cpiwmB010
CSPI01G10310	MELO3C002420	Melon (DHL92) v3.5.1	cpimeB023
CSPI01G10310	MELO3C002435	Melon (DHL92) v3.5.1	cpimeB036
CSPI01G10310	ClCG03G004370	Watermelon (Charleston Gray)	cpiwcgB038
CSPI01G10310	MELO3C002435.2	Melon (DHL92) v3.6.1	cpimedB020
CSPI01G10310	CsaV3_1G010460	Cucumber (Chinese Long) v3	cpicucB017
CSPI01G10310	Cla97C03G055550	Watermelon (97103) v2	cpiwmbB032
CSPI01G10310	Bhi08G001474	Wax gourd	cpiwgoB033
CSPI01G10310	CmaCh18G002740	Cucurbita maxima (Rimu)	cmacpiB401

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G10310	Wax gourd	cpiwgoB047
CSPI01G10310	Cucurbita pepo (Zucchini)	cpecpiB025
CSPI01G10310	Cucumber (Gy14) v1	cgycpiB192
CSPI01G10310	Cucurbita maxima (Rimu)	cmacpiB219
CSPI01G10310	Cucurbita moschata (Rifu)	cmocpiB205
CSPI01G10310	Cucurbita moschata (Rifu)	cmocpiB383
CSPI01G10310	Cucumber (Chinese Long) v2	cpicuB013
CSPI01G10310	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G10310	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G10310	Cucurbita pepo (Zucchini)	cpecpiB506
CSPI01G10310	Cucurbita pepo (Zucchini)	cpecpiB517
CSPI01G10310	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G10310	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G10310	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G10310	Silver-seed gourd	carcpiB0531
CSPI01G10310	Silver-seed gourd	carcpiB1041
CSPI01G10310	Silver-seed gourd	carcpiB1044
CSPI01G10310	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G10310	Cucumber (Chinese Long) v3	cpicucB009