CmoCh16G003350 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G003350
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCyclin-related family protein
LocationCmo_Chr16 : 1551786 .. 1556776 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATGTCGACATGTCAATCACAGCCTTCAAACTCCCGCCATCAATGGAGCTCACAGTCCCAATTCCCCGAATCCCCCAAAATTTCTTCCCAATTCACAGAGCCCTAACTAAATTCCACGTCAATTCCTCATCCTCATCCAAAAGCCCTAATTTCCAATTACCGCTTCCATCAAAATCGCCCAAGCCACCGAAAACCCTAATCGCTCCAAGAGGCGAAGAATTTCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCCCAGAATATAAGCCTCCGGCTGCAAACGTTGGGGCCGTTTTTCCGAATAACGGCGAAAAGTTTGGAATCGCAGCGAGAGATTGGGAAGGCCGAGGGATTGATAAGAGTGTGGTTGCGAGGGAGGATTCTTCACCTGGATTCAATTCGATTGAAGCGAGAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATTCGGTATGGGTATGACTGTGGGTGCAAGACGGCGGAGTTATTGGCCATCAATGACTCCGATCTTTACCATTCTAAGGTTGTTTTTTCTCTCTCATTTTTTACCTTTTTTCTGGATAGAATTTGTCAGTAATTTAAAACATAACTAAAATTGACATTACAGTTTTTATATAAAATTGATATTTTGAGACGAAACTAATATTAAAGTTAAAAAATATTTTTTTTAATAAAATTCTAAAGGATTGGGGCAGATTATAATATTTTTTAAATTTATTTCTATTTTTTATTTCAATTAAAATAACTCGACGTAATCCAATCCTACCCATTATTCCAATTATTTATTTTAATTTTTTTTAGTAATAAATTTTTATTTTACTAAAGTGAAATGTTTTAATTTTTAAATATTTAATTAAAATTTGGGAGTAAAAAATCATATTTTTAATAATAATTTGAGTATGTTCGTTAATCTACCTTTACAGAAAAGAAATTAATGAACTGCAATTTAATTGATAAAATTTTTCATTAATTTGACCTTAATTTTTTATTTTATTTTATGTTTTTATTTTTATCATCAACTCTTTTACATGTCATATTTTATATATTTTGAATGAAAAGAAATGTATCGAGGTTTAATATTGGCTACGTGTTTGGCAGCTCGTTAGATTCTACACAAGGATCGGGTTCAAGAGTGTGTATGAAGTGAGTGGTTCGAAGATAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCTCCCATTGAAGCCCTTCTACTTAAATGGTGTTCACGGTTCAAATCCCGGTCGTCCTAACCCACTAAACTTCCTTTGATGATGTACAACGTATCGTACACTTAGTTCGAGCTTATATTGAGAAAAATGTATTTGTACGTTAATTCAATATATTTATTTAATGTAAATGACGGAAGTTAAAATATTTTTTCAGATTAAATATTTACATGGTTAATTTTTATATAATTTTAACCAAAGAAATTAGTATTTAAAATATTTAAAGAATTACATTAAAATTTTATTAATCTAACATTTATATTGAAAAAAGGGTTGAATTAAATAATAATTATGTAATTTGAATATAACTTATGAGAGTCAAATTTCCATATAATTATTAATTACATCCTTGATTAATAAATAATAAGTTTTCTTTTATTTATTTATTTTTCTGGTAGTTTGACACGTCACTTCACCTTCCCGCGAGATGAAGCCCTAACTTCCCACCCTCTGTTTTAGTGTTTTTCACTTTCTTTCATTTTTTTTCTTTGACACAGAGAACAAAACGGCGCGAAGCAAATGTCGCGTCGTGAAATTCGGGAATCCGATTCCAATCGTCATCGTTCCAGATTCGATGGAGAACCCAGGTACCTTACCTCTCTTTGTCTGATTGTATTTCCATTTCTCTTAAGTTCATTGACTTTTGTTCGGTTTAAATGGTTTGTCTTTGTGTTAGCTTCCATTAAGGTTCCGGAATTTCCATAATTTTGCCCCAGTATGCTAGAGTGTCGGCGTGTGTGAAGTTTGTTGATGATGTTTGCTTTGATGTTGTCGTATTTCAAGCTTCAAGTTACGTAGAACATGTATTTTGATTGTTACCAAAGAAATGATTCGACAATTGCTTTTGCAATGCGCAGTCTAGTACTGCTTATGTCTATTAGTTCTAGTTTCAGATTAGTTCATGGTTATTGATGGCTACTCAGTACCACGCCATTGTTATCAGCCCTGCATTATGCCAATTCAATTTCCTCTAGTTCCAAAACGCTCTAAACAAATATTAATTTTCACTTTTTTGCATAGTCAAAAGTGAGGGATGTGAAGAGAAATGCATTACCATATTTGGATATTGCAGCAATAAGATGGCTTCATTCTTTTCCTTCCAATTGAATCAAAACAATACTGAGATAGAACAAGCGATTAATGTGTTTTAAGTATCGTGTTATACTTAATCATGGAACTCTAGTATGACATGAATATGTGGCTTATTGTTACTAGTCCCAAGAGGTCAAGGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGGGCTTCAACATGAGGGGCAAGATATGATACCCCATGAGTGTTCATCACCACTTGATTCTAAGCCAGAATATGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATAGGAGGGATAGAGGGACAAAACATTCAGTGAATCCCACTGAAGTACCACGATCAAGATCTTATTTACAGGTTTGTGCTACATTAAAGATAGTTTTTCAATTAATTTTGATAATTTCTTCCTTAGTTTTTGAAAAATTAATATTAGTCTAGTTTGATTGTACTAAATTTCATGGTTTTATCTCAATAATTATTGGCAGCATCTTAAGGCTCAGCATTGATATGCTTTACCATTTTGTTGTCTGTCATCTCAATCCCAAGTCACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCACCCCACACACACACACACACACACACACTATGATATATAATAAGGCTGGAAGCTTCAAAACGTTGTGTATTTTTATGGCTGAATTTAGCTGTAATTGCTATTATTCATTGCTTCTTTTCATATGAGCTGCTGAAGGGGGACTGCTGCAAAATATGGGCATAAAAATTACCTGACTTGGTCTTCTTCGAGATATCGTTGTACCTTCCCGGATATAAATGAACTATTGTGGGGATTTCCTATGAATTTCATGAAATTCATGATCTACATTATATTTCATTCAAATATGTTGGATGCAATAAAAGTGGTCATAAACCGCAGCCAATGTCTTCTTGAAGTGAAATGAGGGATTTTTTTAAGAGATTGTTTAAAGTAGGCATCTCAGCCAGAGCATTTCCTTCCTTTATAAAGTAAAGCCGTAGGATATGTTGTAACATGCTTTTTGTTGGGTCAACAAATGAATACATATATTTTTTGGGATCTTTTATTTTGATAGCTATGGAATTTCATCATCCACATTACTAAAACTAAATAGCTTATCTCAGTAATAATTCTCTCTTCTCTATATTTCTCTCTCCTTCCCCTGCTTTTCCCATTCTTTGCTGCAATTTAGATTCCCCAACATTTTGCTGGGCTGATGTTATTGAAATCTTGTTCAGCCCTGTGCCTTCAAGTGCATCCATGTATATTACTTAGGCTTGCCTGTGCATGTCTTATAACAGCATGTCAAACGTGGTAATGACGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGGGGTGGGTTTCTTACTTACTTTTAAGCCCCAATTCCAACTTTTTTTCAAGTTCTCTTCCTTATTTTTTCTCTTGTTACACGCCATGAGTACAGGTACACAAAGGACACGATGTTTAGTCTACTCCTTGTAACGTTACTGATCAAAGCTATTGCGCATGTATTGTTGTTGTTGTTATTATTGTTATTGTTATTTCGACTCTCATAAACGTTATTCTAAATATTTGGAGCAACTAAAAGATACTATTGTTTTTGTAGTTTATGTAGTCGTGCATGGGAAACTTTAGAATATCTCTTCAATCTTTCCATTCTTGTTTCTCTTCTCATGATTTAGTATCTGGGTTTGCCTTCTTTTTAGAGCGTGGTTGGTGGAAGGACTCAAGGGAGAAGGAGAAGGATAACGATAGGGCATCTGGGAAGGCAACAGCTTATAATTCACAGCAAAGAGATGAGATGCCACAAGCCGTGAGAGACGATAGCCACCGTGATGAGTCCTCGAAACAGGAGGTTGATGCACCCACATCTGCTTGGAAAAAGGCCTGCATTTAGGGAGAAGAAGATCACAGTAGGCGATGAAAATGGTGAGAAAGCAGCTACTGTATCAGAGATTCAGATATCGAGTGATCCACACCAGCCTCGGGATGGAAGGGAACGAAGAGAAGAAAGAGGCTGTCATACCCTTTATTTCAAAAATAAGAACTTGAAGGATACTTTTGAAAGAAAATTAACTAATTTCCTTCTAAATTAATGGTAAATGTATTTTTTTTTTTTAAAATTA

mRNA sequence

CCATGTCGACATGTCAATCACAGCCTTCAAACTCCCGCCATCAATGGAGCTCACAGTCCCAATTCCCCGAATCCCCCAAAATTTCTTCCCAATTCACAGAGCCCTAACTAAATTCCACGTCAATTCCTCATCCTCATCCAAAAGCCCTAATTTCCAATTACCGCTTCCATCAAAATCGCCCAAGCCACCGAAAACCCTAATCGCTCCAAGAGGCGAAGAATTTCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCCCAGAATATAAGCCTCCGGCTGCAAACGTTGGGGCCGTTTTTCCGAATAACGGCGAAAAGTTTGGAATCGCAGCGAGAGATTGGGAAGGCCGAGGGATTGATAAGAGTGTGGTTGCGAGGGAGGATTCTTCACCTGGATTCAATTCGATTGAAGCGAGAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATTCGGTATGGGTATGACTGTGGGTGCAAGACGGCGGAGTTATTGGCCATCAATGACTCCGATCTTTACCATTCTAAGCTCGTTAGATTCTACACAAGGATCGGGTTCAAGAGTGTGTATGAAGTGAGTGGTTCGAAGATAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCTCCCATTGAAGCCCTTCTACTTAAATGGTGTTCACGAGAACAAAACGGCGCGAAGCAAATGTCGCGTCGTGAAATTCGGGAATCCGATTCCAATCGTCATCGTTCCAGATTCGATGGAGAACCCAGTCCCAAGAGGTCAAGGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGGGCTTCAACATGAGGGGCAAGATATGATACCCCATGAGTGTTCATCACCACTTGATTCTAAGCCAGAATATGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATAGGAGGGATAGAGGGACAAAACATTCAGTGAATCCCACTGAAGTACCACGATCAAGATCTTATTTACAGCATGTCAAACGTGGTAATGACGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGGGAGCGTGGTTGGTGGAAGGACTCAAGGGAGAAGGAGAAGGATAACGATAGGGCATCTGGGAAGGCAACAGCTTATAATTCACAGCAAAGAGATGAGATGCCACAAGCCGTGAGAGACGATAGCCACCGTGATGAGTCCTCGAAACAGGAGGTTGATGCACCCACATCTGCTTGGAAAAAGGCCTGCATTTAGGGAGAAGAAGATCACAGTAGGCGATGAAAATGGTGAGAAAGCAGCTACTGTATCAGAGATTCAGATATCGAGTGATCCACACCAGCCTCGGGATGGAAGGGAACGAAGAGAAGAAAGAGGCTGTCATACCCTTTATTTCAAAAATAAGAACTTGAAGGATACTTTTGAAAGAAAATTAACTAATTTCCTTCTAAATTAATGGTAAATGTATTTTTTTTTTTTAAAATTA

Coding sequence (CDS)

ATGTCAATCACAGCCTTCAAACTCCCGCCATCAATGGAGCTCACAGTCCCAATTCCCCGAATCCCCCAAAATTTCTTCCCAATTCACAGAGCCCTAACTAAATTCCACGTCAATTCCTCATCCTCATCCAAAAGCCCTAATTTCCAATTACCGCTTCCATCAAAATCGCCCAAGCCACCGAAAACCCTAATCGCTCCAAGAGGCGAAGAATTTCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCCCAGAATATAAGCCTCCGGCTGCAAACGTTGGGGCCGTTTTTCCGAATAACGGCGAAAAGTTTGGAATCGCAGCGAGAGATTGGGAAGGCCGAGGGATTGATAAGAGTGTGGTTGCGAGGGAGGATTCTTCACCTGGATTCAATTCGATTGAAGCGAGAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATTCGGTATGGGTATGACTGTGGGTGCAAGACGGCGGAGTTATTGGCCATCAATGACTCCGATCTTTACCATTCTAAGCTCGTTAGATTCTACACAAGGATCGGGTTCAAGAGTGTGTATGAAGTGAGTGGTTCGAAGATAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCTCCCATTGAAGCCCTTCTACTTAAATGGTGTTCACGAGAACAAAACGGCGCGAAGCAAATGTCGCGTCGTGAAATTCGGGAATCCGATTCCAATCGTCATCGTTCCAGATTCGATGGAGAACCCAGTCCCAAGAGGTCAAGGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGGGCTTCAACATGAGGGGCAAGATATGATACCCCATGAGTGTTCATCACCACTTGATTCTAAGCCAGAATATGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATAGGAGGGATAGAGGGACAAAACATTCAGTGAATCCCACTGAAGTACCACGATCAAGATCTTATTTACAGCATGTCAAACGTGGTAATGACGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGGGAGCGTGGTTGGTGGAAGGACTCAAGGGAGAAGGAGAAGGATAACGATAGGGCATCTGGGAAGGCAACAGCTTATAATTCACAGCAAAGAGATGAGATGCCACAAGCCGTGAGAGACGATAGCCACCGTGATGAGTCCTCGAAACAGGAGGTTGATGCACCCACATCTGCTTGGAAAAAGGCCTGCATTTAG
Homology
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BLAST of CmoCh16G003350 vs. TrEMBL
Match: A0A0A0KT41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000740 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.2e-91
Identity = 179/222 (80.63%), Postives = 194/222 (87.39%), Query Frame = 1 

Query: 12  MEL-TVPIPRIPQNFFPIHRALTKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEE 71
           MEL T+ IPRIP    PIHR LTK H  +SSSSKSPN QLPLPSK  +  +  I      
Sbjct: 1   MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNENNI------ 60

Query: 72  FPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDS 131
            PTMAEIVAAGEAQN+SLRLQTLGPFFRITAKSL ++REIGKAEGL+RVWL G+ILHLDS
Sbjct: 61  -PTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRVWLGGKILHLDS 120

Query: 132 IRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 191
           IRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG
Sbjct: 121 IRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 180

Query: 192 FKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSR 233
           FKS+YEVSGSK+ DIGDMLVWGG+GTRMDAPI++LLLKWC+R
Sbjct: 181 FKSMYEVSGSKLKDIGDMLVWGGIGTRMDAPIDSLLLKWCTR 213

[Close]
BLAST of CmoCh16G003350 vs. TrEMBL
Match: B9HMZ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09130g PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.8e-72
Identity = 141/206 (68.45%), Postives = 164/206 (79.61%), Query Frame = 1 

Query: 27  PIHRALTKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEEFPTMAEIVAAGEAQNI 86
           P     TK H NSS      N Q  + + + K             PTM E++AA +AQN+
Sbjct: 76  PDQMTTTKTHFNSS------NIQYEINTNNIK---------NVAVPTMTEVLAASKAQNL 135

Query: 87  SLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDSIRLKRESLGMEKSIFG 146
            L+LQTLGPFFRITAKSLE+Q E+G+AEGLIRVWL+G+ILHLDSIRL+RE+LGMEKSIFG
Sbjct: 136 DLQLQTLGPFFRITAKSLETQNELGRAEGLIRVWLKGKILHLDSIRLRRETLGMEKSIFG 195

Query: 147 LGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSVYEVSGSKIGDIG 206
           +GLFIGAVAIRYGYD GCKTAELLAINDSDLYHSKLVRFYTRIGFK+VYEV+GS IGD+ 
Sbjct: 196 IGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLP 255

Query: 207 DMLVWGGVGTRMDAPIEALLLKWCSR 233
            MLVWGG+GTRMDA +E LL+KWC+R
Sbjct: 256 HMLVWGGIGTRMDADVEELLIKWCAR 266

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BLAST of CmoCh16G003350 vs. TrEMBL
Match: M5VIM7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026361mg PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70
Identity = 128/176 (72.73%), Postives = 154/176 (87.50%), Query Frame = 1 

Query: 61  KTLIAPRGEEFPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVW 120
           K   A  G   PTM+EI+A+  AQN+ L+LQTLGPFFRITAKSLE+Q+E+GKAEGLIR W
Sbjct: 1   KNTEASSGATMPTMSEILASSRAQNLDLQLQTLGPFFRITAKSLETQKELGKAEGLIRFW 60

Query: 121 LRGRILHLDSIRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHS 180
           L G+ILHL+SIRL+RE+LGMEKSIFG+GLFIGAVAIRYGYDCGC+TAELLAINDSD++H 
Sbjct: 61  LSGKILHLESIRLQRETLGMEKSIFGIGLFIGAVAIRYGYDCGCRTAELLAINDSDIFHH 120

Query: 181 KLVRFYTRIGFKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSREQNG 237
           KLVRFY+RIGFK+V+EV+GS  GD   MLVWGG+GTRMDA +E LL+KWC+R ++G
Sbjct: 121 KLVRFYSRIGFKAVHEVTGSTFGDYAHMLVWGGIGTRMDASVEELLIKWCTRFKSG 176

[Close]
BLAST of CmoCh16G003350 vs. TrEMBL
Match: F6H657_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00850 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.7e-70
Identity = 130/175 (74.29%), Postives = 151/175 (86.29%), Query Frame = 1 

Query: 58  KPPKTLIAPRGEEFPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLI 117
           KP            PTM+EI+ +  AQN++L+LQTLGPFFRITAKSLE+Q E+G+AEGLI
Sbjct: 42  KPHYNAAHKNSNSIPTMSEIMDSSRAQNLNLQLQTLGPFFRITAKSLETQGELGRAEGLI 101

Query: 118 RVWLRGRILHLDSIRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDL 177
           RVWL GRILHLDSIRL+RE+LGMEKSIFG+GLFIGAVAIRYGYD GC+TAELLAINDSDL
Sbjct: 102 RVWLGGRILHLDSIRLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCRTAELLAINDSDL 161

Query: 178 YHSKLVRFYTRIGFKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSR 233
           YHSKLVRFYTRIGFK+V+EV+GS +GD+  MLVWGG+GTRMDA IE LL++WC R
Sbjct: 162 YHSKLVRFYTRIGFKAVHEVTGSSMGDLAHMLVWGGIGTRMDAKIEELLVRWCKR 216

[Close]
BLAST of CmoCh16G003350 vs. TrEMBL
Match: A0A0A0KV12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000750 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69
Identity = 149/194 (76.80%), Postives = 161/194 (82.99%), Query Frame = 1 

Query: 240 MSRREIRESDSNRHRSRFDGEPSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQH 299
           MSRRE RESDS RHRSRFD EPSPKRS+RDRKTLEEKLSRNSSSHVEDNK+RDQKH L+ 
Sbjct: 1   MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRL 60

Query: 300 EGQDMIPHECSSPLDSKPEYGVSKGANRNSDRRDRGTKHSVNPTEVPRSRSYLQHVKRGN 359
            GQDMIPHE S  L+SKPE G   GANRNSD RD GTKHSVNPTEVPRSRSY QH +R N
Sbjct: 61  VGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSN 120

Query: 360 DGQVGRSFGRSATRERGWWKDSREKEKDNDRASGKATAYNSQQRDEMPQAVRDDSHRDES 419
            GQVGRSFGRSAT ERGWWKDS++ +KD+DRASGK+  Y SQQRDE PQA R+D H D S
Sbjct: 121 AGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGS 180

Query: 420 SKQEVDAPTSAWKK 434
           SK EVDA T A K+
Sbjct: 181 SKLEVDALTPARKR 194

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BLAST of CmoCh16G003350 vs. TAIR10
Match: AT3G19650.1 (AT3G19650.1 cyclin-related)

HSP 1 Score: 59.7 bits (143), Expect = 5.2e-09
Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1 

Query: 241 SRREIRESDSNRHRSRFDGEPSPKRSRRDRKTLEEKLSRNSSSHVEDNKD--RDQKHGLQ 300
           +RRE R+SD  RHRSR D EPSPKRSRRD K   E++       V D  D  ++ +  L+
Sbjct: 3   TRRESRDSDPRRHRSRIDREPSPKRSRRDGKPEAERVLSKKDLDVRDGTDTEKNSRQSLR 62

Query: 301 HEGQDMIPHECSSPLDSKPEYGVSKGANRNSDRRDRG----TKHSVNPTEVPRSRSYLQH 360
               ++  H                G+ ++S+++  G    TK + + ++VPRSR Y QH
Sbjct: 63  DAPLELDAH----------------GSRKDSEKKHSGHHETTKAAPHLSQVPRSRPYSQH 122

Query: 361 VKRGNDGQVGRSFGRSATRERGWWKDSREKEKDNDRASGKATAYNSQQRDEMPQAVRDDS 420
             R +DG+V     R  T  RG W+ SR  ++ N RA       +  ++DE   + R D 
Sbjct: 123 DDRRSDGKV----DRRPTSVRGSWRSSR--DQSNRRAGDDEK--SQHRKDEDKSSWRHDR 166

Query: 421 HRDESSKQ 423
            R+    Q
Sbjct: 183 FRESDDTQ 166

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BLAST of CmoCh16G003350 vs. NCBI nr
Match: gi|659108807|ref|XP_008454398.1| (PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 182/225 (80.89%), Postives = 197/225 (87.56%), Query Frame = 1 

Query: 12  MEL-TVPIPRIPQNFFPIHRALTKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEE 71
           MEL T+ IPRIP    PIHR LTK H  +SSSSK PN QLPLPSKS      LI  RG+ 
Sbjct: 1   MELFTITIPRIPHKISPIHRTLTKIH--ASSSSKYPNSQLPLPSKS------LITTRGQN 60

Query: 72  ---FPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILH 131
               PTMAEIVAAGE+QN+SLRLQTLGPFFRITAKSLE++REIGKAEGL+RVWL G+ILH
Sbjct: 61  ENNIPTMAEIVAAGESQNLSLRLQTLGPFFRITAKSLETEREIGKAEGLVRVWLGGKILH 120

Query: 132 LDSIRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYT 191
           LDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYT
Sbjct: 121 LDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYT 180

Query: 192 RIGFKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSR 233
           RIGFKS+YEVSGSK+ DIGDM+VWGG+GTRMDAPIE+LLLKWC+R
Sbjct: 181 RIGFKSMYEVSGSKLKDIGDMVVWGGIGTRMDAPIESLLLKWCTR 217

[Close]
BLAST of CmoCh16G003350 vs. NCBI nr
Match: gi|778689175|ref|XP_004152376.2| (PREDICTED: uncharacterized protein LOC101217699 isoform X1 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 179/222 (80.63%), Postives = 194/222 (87.39%), Query Frame = 1 

Query: 12  MEL-TVPIPRIPQNFFPIHRALTKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEE 71
           MEL T+ IPRIP    PIHR LTK H  +SSSSKSPN QLPLPSK  +  +  I      
Sbjct: 1   MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNENNI------ 60

Query: 72  FPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDS 131
            PTMAEIVAAGEAQN+SLRLQTLGPFFRITAKSL ++REIGKAEGL+RVWL G+ILHLDS
Sbjct: 61  -PTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRVWLGGKILHLDS 120

Query: 132 IRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 191
           IRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG
Sbjct: 121 IRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 180

Query: 192 FKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSR 233
           FKS+YEVSGSK+ DIGDMLVWGG+GTRMDAPI++LLLKWC+R
Sbjct: 181 FKSMYEVSGSKLKDIGDMLVWGGIGTRMDAPIDSLLLKWCTR 213

[Close]
BLAST of CmoCh16G003350 vs. NCBI nr
Match: gi|224105727|ref|XP_002313913.1| (hypothetical protein POPTR_0009s09130g [Populus trichocarpa])

HSP 1 Score: 280.8 bits (717), Expect = 4.1e-72
Identity = 141/206 (68.45%), Postives = 164/206 (79.61%), Query Frame = 1 

Query: 27  PIHRALTKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEEFPTMAEIVAAGEAQNI 86
           P     TK H NSS      N Q  + + + K             PTM E++AA +AQN+
Sbjct: 76  PDQMTTTKTHFNSS------NIQYEINTNNIK---------NVAVPTMTEVLAASKAQNL 135

Query: 87  SLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDSIRLKRESLGMEKSIFG 146
            L+LQTLGPFFRITAKSLE+Q E+G+AEGLIRVWL+G+ILHLDSIRL+RE+LGMEKSIFG
Sbjct: 136 DLQLQTLGPFFRITAKSLETQNELGRAEGLIRVWLKGKILHLDSIRLRRETLGMEKSIFG 195

Query: 147 LGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSVYEVSGSKIGDIG 206
           +GLFIGAVAIRYGYD GCKTAELLAINDSDLYHSKLVRFYTRIGFK+VYEV+GS IGD+ 
Sbjct: 196 IGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLP 255

Query: 207 DMLVWGGVGTRMDAPIEALLLKWCSR 233
            MLVWGG+GTRMDA +E LL+KWC+R
Sbjct: 256 HMLVWGGIGTRMDADVEELLIKWCAR 266

[Close]
BLAST of CmoCh16G003350 vs. NCBI nr
Match: gi|743795183|ref|XP_011001969.1| (PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica])

HSP 1 Score: 280.8 bits (717), Expect = 4.1e-72
Identity = 142/206 (68.93%), Postives = 164/206 (79.61%), Query Frame = 1 

Query: 27  PIHRALTKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEEFPTMAEIVAAGEAQNI 86
           P     TK H+NSS      N Q  + + +          R    PTM E++AA +AQN+
Sbjct: 38  PDQMTTTKTHLNSS------NIQYEINTNNI---------RNVAVPTMTEVLAASKAQNL 97

Query: 87  SLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDSIRLKRESLGMEKSIFG 146
            L+LQ LGPFFRITAKSLE+Q E+G+AEGLIRVWL+G+ILHLDSIRL+RE+LGMEKSIFG
Sbjct: 98  DLQLQILGPFFRITAKSLETQNELGRAEGLIRVWLKGKILHLDSIRLRRETLGMEKSIFG 157

Query: 147 LGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSVYEVSGSKIGDIG 206
           +GLFIGAVAIRYGYD GCKTAELLAINDSDLYHSKLVRFYTRIGFK+VYEV+GS IGD+ 
Sbjct: 158 IGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLP 217

Query: 207 DMLVWGGVGTRMDAPIEALLLKWCSR 233
            MLVWGG+GTRMDA IE LLLKWC+R
Sbjct: 218 HMLVWGGIGTRMDADIEELLLKWCAR 228

[Close]
BLAST of CmoCh16G003350 vs. NCBI nr
Match: gi|743938690|ref|XP_011013784.1| (PREDICTED: uncharacterized protein LOC105117727 [Populus euphratica])

HSP 1 Score: 279.6 bits (714), Expect = 9.1e-72
Identity = 131/161 (81.37%), Postives = 151/161 (93.79%), Query Frame = 1 

Query: 72  PTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDSI 131
           PTM E++AA +AQN+ L+LQTLGPFFRITAKSLE+Q E+G+AEGLIRVWL+G+ILHLDSI
Sbjct: 68  PTMTEVLAASKAQNLDLQLQTLGPFFRITAKSLETQNELGRAEGLIRVWLKGKILHLDSI 127

Query: 132 RLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGF 191
           RL+RE+LGMEKSIFG+GLFIGAVAIRYGYD GCKTAELLAINDSDLYHSKLVRFYTRIGF
Sbjct: 128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGF 187

Query: 192 KSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSR 233
           ++VYEV+GS IGD+  MLVWGG+GTRMDA IE LL+KWC+R
Sbjct: 188 EAVYEVTGSTIGDLPHMLVWGGIGTRMDADIEELLIKWCAR 228

The following BLAST results are available for this feature:
BLAST of CmoCh16G003350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G003350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT41_CUCSA1.2e-9180.63Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000740 PE=4 SV=1[more]
B9HMZ7_POPTR2.8e-7268.45Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09130g PE=4 SV=1[more]
M5VIM7_PRUPE2.0e-7072.73Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026361mg PE=4 S... [more]
F6H657_VITVI7.7e-7074.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00850 PE=4 SV=... [more]
A0A0A0KV12_CUCSA1.3e-6976.80Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000750 PE=4 SV=1[more]
BLAST of CmoCh16G003350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19650.15.2e-0932.98 cyclin-related[more]
BLAST of CmoCh16G003350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108807|ref|XP_008454398.1|1.4e-9380.89PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo][more]
gi|778689175|ref|XP_004152376.2|1.8e-9180.63PREDICTED: uncharacterized protein LOC101217699 isoform X1 [Cucumis sativus][more]
gi|224105727|ref|XP_002313913.1|4.1e-7268.45hypothetical protein POPTR_0009s09130g [Populus trichocarpa][more]
gi|743795183|ref|XP_011001969.1|4.1e-7268.93PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica][more]
gi|743938690|ref|XP_011013784.1|9.1e-7281.37PREDICTED: uncharacterized protein LOC105117727 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G003350.1CmoCh16G003350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36897FAMILY NOT NAMEDcoord: 71..245
score: 5.3E
NoneNo IPR availablePANTHERPTHR36897:SF1SUBFAMILY NOT NAMEDcoord: 71..245
score: 5.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G003350Cucsa.298350Cucumber (Gy14) v1cgycmoB0818
CmoCh16G003350CmaCh16G003150Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G003350CmaCh04G004490Cucurbita maxima (Rimu)cmacmoB701
CmoCh16G003350Cla006437Watermelon (97103) v1cmowmB287
CmoCh16G003350Csa4G000740Cucumber (Chinese Long) v2cmocuB322
CmoCh16G003350MELO3C018010Melon (DHL92) v3.5.1cmomeB298
CmoCh16G003350ClCG10G010270Watermelon (Charleston Gray)cmowcgB273
CmoCh16G003350CSPI04G00230Wild cucumber (PI 183967)cmocpiB329
CmoCh16G003350Lsi03G010170Bottle gourd (USVL1VR-Ls)cmolsiB294
CmoCh16G003350Cp4.1LG14g04580Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G003350Cp4.1LG01g02630Cucurbita pepo (Zucchini)cmocpeB311
CmoCh16G003350MELO3C018010.2Melon (DHL92) v3.6.1cmomedB342
CmoCh16G003350CsaV3_4G000220Cucumber (Chinese Long) v3cmocucB0385
CmoCh16G003350Cla97C10G193220Watermelon (97103) v2cmowmbB316
CmoCh16G003350Bhi11G000931Wax gourdcmowgoB0405
CmoCh16G003350CsGy4G000240Cucumber (Gy14) v2cgybcmoB465
CmoCh16G003350Carg08119Silver-seed gourdcarcmoB0509
CmoCh16G003350Carg19690Silver-seed gourdcarcmoB0402
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G003350CmoCh04G004810Cucurbita moschata (Rifu)cmocmoB286
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G003350Cucumber (Chinese Long) v3cmocucB0369
CmoCh16G003350Cucumber (Chinese Long) v3cmocucB0391
CmoCh16G003350Cucumber (Chinese Long) v3cmocucB0408
CmoCh16G003350Cucumber (Chinese Long) v3cmocucB0409
CmoCh16G003350Watermelon (97103) v2cmowmbB333
CmoCh16G003350Wax gourdcmowgoB0444
CmoCh16G003350Cucurbita moschata (Rifu)cmocmoB010
CmoCh16G003350Cucurbita moschata (Rifu)cmocmoB096
CmoCh16G003350Cucurbita moschata (Rifu)cmocmoB296
CmoCh16G003350Cucumber (Gy14) v1cgycmoB0219
CmoCh16G003350Cucumber (Gy14) v1cgycmoB0625
CmoCh16G003350Cucumber (Gy14) v1cgycmoB0964
CmoCh16G003350Cucurbita maxima (Rimu)cmacmoB133
CmoCh16G003350Cucurbita maxima (Rimu)cmacmoB502
CmoCh16G003350Wild cucumber (PI 183967)cmocpiB336
CmoCh16G003350Wild cucumber (PI 183967)cmocpiB344
CmoCh16G003350Cucumber (Chinese Long) v2cmocuB328
CmoCh16G003350Cucumber (Chinese Long) v2cmocuB337
CmoCh16G003350Cucumber (Chinese Long) v2cmocuB338
CmoCh16G003350Melon (DHL92) v3.5.1cmomeB304
CmoCh16G003350Melon (DHL92) v3.5.1cmomeB280
CmoCh16G003350Cucurbita pepo (Zucchini)cmocpeB321
CmoCh16G003350Bottle gourd (USVL1VR-Ls)cmolsiB291
CmoCh16G003350Bottle gourd (USVL1VR-Ls)cmolsiB298
CmoCh16G003350Cucumber (Gy14) v2cgybcmoB471
CmoCh16G003350Cucumber (Gy14) v2cgybcmoB732
CmoCh16G003350Melon (DHL92) v3.6.1cmomedB349
CmoCh16G003350Melon (DHL92) v3.6.1cmomedB317
CmoCh16G003350Melon (DHL92) v3.6.1cmomedB341
CmoCh16G003350Silver-seed gourdcarcmoB0258