CSPI04G00230 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTTTACGAGTATAATAAACGACTGATAATTTTAAAAGCACTTTTATCCATCAAAGTATATGATTGAGAGTTGGATGAAAGATGGAATTCCCCAACCTATGAAACAACACCTTCCCCAATTTGCATTTCCATGTTTCCTCACTAAATTCAATACCTTCAAAACTCCCGCCATTAATGGAGTTATTCACAATCACAATTCCCCGAATCCCCCATAAAAATTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCTCATCCAAATCCCCTAATTCACAATTACCACTTCCATCAAAATTCGGGCGGCAAAATGAAAACAACATTCCGACGATGGCAGAGATTGTGGCAGCGGGGGAGGCCCAGAATCTGAGCCTCCGTCTGCAAACATTGGGGCCGTTTTTCCGAATAACAGCGAAAAGCTTGGGAACGGAGAGAGAGATCGGGAAGGCGGAAGGTTTGGTGAGAGTGTGGTTGGGAGGGAAGATTCTTCATCTTGATTCGATTCGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCCATCTTTGGGCTTGGATTGTTCATCGGTGCTGTTGCGATTCGGTATGGGTATGATTGTGGTTGCAAAACGGCGGAGTTATTGGCCATTAATGACTCCGATCTTTACCATTCCAAGGTTTTTTTTCTTCTTATCTCTTTCATTTTACTTTTTACATCTTTCTGGATAGAATTTGATTGAAGAAGGCCATGCACAGTAATTAACACACACACCACCACATGGTCAAACGGCAAAAAATTGCATACAGTCCACTCAAGATAAACTCTAATTGATTTTATAATAAGTTCATGTGTGTGTTAACAACTTGTCTTTCATGCTTGTGTAACAATTGAAGTGGTAAAGCCTTAACTCTTGAAGATAACAATTGGGTGATAGATAGCCTGATAGGATGTCAGTTACTCTTTCTATTTTTTCTAGTAGTTCAACAATTACATACGGGGATGGCTAACAATAATCCTTACCATTCTAGTTACAAATTAAGCAATTTTTTTAGGCGAGTTAAGGAGAAATGTGTGAAAGTTATTTTAAAATAAAAACAAAACAAAGGTAATGACATTGAAGATTGGACGCAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTGGTTCAAAGTTAAAAGACATTGGAGACATGCTGGTGTGGGGAGGGATTGGGACTAGAATGGATGCTCCCATTGACTCCCTTCTACTTAAATGGTGCACAAGGTTTAAACCTCACTAGTTCCTTTTTTTCCTTTTCTTTTGTTAATTTATAAGTAAGATGTATGATTTGTATGCATAGTTCACACTTAGGTTAAAGATG ATGGAGTTATTCACAATCACAATTCCCCGAATCCCCCATAAAAATTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCTCATCCAAATCCCCTAATTCACAATTACCACTTCCATCAAAATTCGGGCGGCAAAATGAAAACAACATTCCGACGATGGCAGAGATTGTGGCAGCGGGGGAGGCCCAGAATCTGAGCCTCCGTCTGCAAACATTGGGGCCGTTTTTCCGAATAACAGCGAAAAGCTTGGGAACGGAGAGAGAGATCGGGAAGGCGGAAGGTTTGGTGAGAGTGTGGTTGGGAGGGAAGATTCTTCATCTTGATTCGATTCGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCCATCTTTGGGCTTGGATTGTTCATCGGTGCTGTTGCGATTCGGTATGGGTATGATTGTGGTTGCAAAACGGCGGAGTTATTGGCCATTAATGACTCCGATCTTTACCATTCCAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTGGTTCAAAGTTAAAAGACATTGGAGACATGCTGGTGTGGGGAGGGATTGGGACTAGAATGGATGCTCCCATTGACTCCCTTCTACTTAAATGGTGCACAAGGTTTAAACCTCACTAG ATGGAGTTATTCACAATCACAATTCCCCGAATCCCCCATAAAAATTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCTCATCCAAATCCCCTAATTCACAATTACCACTTCCATCAAAATTCGGGCGGCAAAATGAAAACAACATTCCGACGATGGCAGAGATTGTGGCAGCGGGGGAGGCCCAGAATCTGAGCCTCCGTCTGCAAACATTGGGGCCGTTTTTCCGAATAACAGCGAAAAGCTTGGGAACGGAGAGAGAGATCGGGAAGGCGGAAGGTTTGGTGAGAGTGTGGTTGGGAGGGAAGATTCTTCATCTTGATTCGATTCGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCCATCTTTGGGCTTGGATTGTTCATCGGTGCTGTTGCGATTCGGTATGGGTATGATTGTGGTTGCAAAACGGCGGAGTTATTGGCCATTAATGACTCCGATCTTTACCATTCCAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTGGTTCAAAGTTAAAAGACATTGGAGACATGCTGGTGTGGGGAGGGATTGGGACTAGAATGGATGCTCCCATTGACTCCCTTCTACTTAAATGGTGCACAAGGTTTAAACCTCACTAG
BLAST of CSPI04G00230 vs. TrEMBL
Match: A0A0A0KT41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000740 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 1.4e-120 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1
BLAST of CSPI04G00230 vs. TrEMBL
Match: B9HMZ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09130g PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 4.9e-73 Identity = 144/213 (67.61%), Postives = 167/213 (78.40%), Query Frame = 1
BLAST of CSPI04G00230 vs. TrEMBL
Match: F6H657_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00850 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.9e-72 Identity = 130/169 (76.92%), Postives = 154/169 (91.12%), Query Frame = 1
BLAST of CSPI04G00230 vs. TrEMBL
Match: M5VIM7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026361mg PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.7e-70 Identity = 125/164 (76.22%), Postives = 148/164 (90.24%), Query Frame = 1
BLAST of CSPI04G00230 vs. TrEMBL
Match: M1CF29_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025744 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 3.0e-70 Identity = 139/217 (64.06%), Postives = 167/217 (76.96%), Query Frame = 1
BLAST of CSPI04G00230 vs. NCBI nr
Match: gi|778689175|ref|XP_004152376.2| (PREDICTED: uncharacterized protein LOC101217699 isoform X1 [Cucumis sativus]) HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-120 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1
BLAST of CSPI04G00230 vs. NCBI nr
Match: gi|659108807|ref|XP_008454398.1| (PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo]) HSP 1 Score: 406.8 bits (1044), Expect = 2.5e-110 Identity = 206/219 (94.06%), Postives = 209/219 (95.43%), Query Frame = 1
BLAST of CSPI04G00230 vs. NCBI nr
Match: gi|778689178|ref|XP_011652914.1| (PREDICTED: uncharacterized protein LOC101217699 isoform X2 [Cucumis sativus]) HSP 1 Score: 323.9 bits (829), Expect = 2.1e-85 Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI04G00230 vs. NCBI nr
Match: gi|743795183|ref|XP_011001969.1| (PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica]) HSP 1 Score: 283.5 bits (724), Expect = 3.1e-73 Identity = 146/213 (68.54%), Postives = 167/213 (78.40%), Query Frame = 1
BLAST of CSPI04G00230 vs. NCBI nr
Match: gi|224105727|ref|XP_002313913.1| (hypothetical protein POPTR_0009s09130g [Populus trichocarpa]) HSP 1 Score: 282.3 bits (721), Expect = 7.0e-73 Identity = 144/213 (67.61%), Postives = 167/213 (78.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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