Carg08119 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08119
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cyclin-related, putative isoform 1
Location	Cucurbita_argyrosperma_scaffold_050 : 837406 .. 841809 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCATCATCACTTCTCCAGGTTCCCGCGAGACGAAGCCCTAACTTCCCATTCTCTCTGTGTTTCACTTTCTTGTTCCATTTTCTTTGACATAATCAAGAGCGGGAAAGCAAATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAAAGAACCCAGGTACCCTCCTCCTCATCTATAAGAATTTGTTCGGTTTAAATGGATTGTCGTTGTGTCTGCTTCAGTTCGGATTCTGGAATTTCCATGATTTTCCCCCAATATGCTTGAGTGACGTCGCGTGTGGTTTAGTTTGTTTGATGGTATCTTGATGGGAAGGAACACTGTGCATTTGGCGTTCTTATTCATATTCGATTATGGCTCTTTCATTTTTGTTTGGAACGTAAATTTGTTCAATTTGATTCGTCTATTGTTACAGTGTCGATTGATATGATATGTTTAAATGGGTCTCGGGGAATTGGGTTTTATGGAGCTCTTGTGTATGATAGGATGAACTAGTTCATTAATTTTGGAGATCTTTTTTTTTGGAAGATGGAATAGAAATCAACTCATTCCCTCCTTATGTTGGTTGTACCGTCTTTAAGCCTTGCTCCGCTATTTTCTCACTAATGACGTGAGAGGTGGTTTTATTTGTTTAACGAAGTTTGTAAATTTGAGCTGTAAATAGTATCAGTTCAGTATCTATTTTGTATGGAAGGACGAACTAGTTCATTTATTCTTGAGTTTTTTTTTTCTTTTCTTTTTTATGATTGAGAATTATAATCTACAAGTTCTCATCTTATTTCTTTTTTTTATGCTCCATTGTTTTTCACTCTAATGATGTGAGGTTATTCATAAACAAAACTGTAAAAGTGAGATTGGAAATTGTATTTTGAAAGATTAATGTTTGTTCTTAGATAGGAAGCATGGACACATGTTTGACATGGATATGTATTGACATGTGATGGACATTTATCCGACACACCAAATTGTAGAGTGTGTGTATATATATATCTATATATATTATTGTCAACTGACCTGGTCTTTTGTGTTCTTGATGAAACATATTTTTGTTTTTTTGAATGTCAACTTCGTGTTTTTATCTAGTTTGAAATATTAAATATACCAATATGTACACATCTTCTATAAGAAAAAATGTGATGCATTCATGTCATAGTGTATAGAAATTAATGTGTTGCTGTGTTCGTATCATCTCTTTTGTTGTATCTATGCCCCTTTGTCTGCATTTGTGCTTGTGAAGTTCATAGGTGTGAATGGGTAAGTATCTACATTGGTGGTCACTGGTGAAAGCTCCTTATATATTGTTTTTTTATATTACCTTGTTTATTTCCATGTTATGTGCTCGAGTGCTCACATATCTTTTGAAGTGCTTGGACTCTGAAGTGTATGCTAATGTGTAGTCGAAGTGGTTGATGGTTGAATGTTGATTGTTGGATGCTTAATGTTGAATGTATGAGTGAAAATTGTAGTTTGCCAATCAATTTAGAACACACATTTCTTTTATAGTCTCTTTTAGTTGATTGAATGAGCATTCAGTGGAGAGGATCTGCGTATTCTTAGAAAAAGGTTGCTTGCATATATGTATATTTCTAGCTTCAAGCTACCAAGAACATATATTTTGATTGTTACCAAAGAAATGATCGGACAATTGCTTTGGCAATGCTCAGTCTCGTAGTTGCTTATATGTATTAGTTCTAGTTTCAAATTAATTCATGGTTTTTTATGGCTAGTTGGTAGTATGTCGTTGTTATCAGCCCTGCATCATGCCAATTAAATTTCCCCAGTTCTAAAATGGCCAAAACAAATATTTCCAAGTCAAAAGTGAGGACTCTGAAGCTCCTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCATATTTAATTCAAAATAATACTGCAGATTGAATAAGGGAAACCCTAGTTCAAGAAGAATAGGACGGAAGTTAATGCATGTAAGTACCATCTGATACTTAATCATGGAACTCTAATATGACTTAAATACGTTATTTGTTGTTACTAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGCGACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACCAAACGTTCATTGAATCCCACTGAAGCACCACGATCACGATCTTATTTTCAGGTTTGTGCTACATTAATTTTGATAATTTCTTTCTTATTTAGTTTTAAAAATAAAATTAGCATGATTCTAATTTGGCTTCAGTCAATGTTGTTTTGAAGTGAAATAAGGGATTTTTTAGAAGAGATTGTTTAAGGTAGACACCCCCCAGAGCATTTTCTTCCTTAATGAAATAAAGCCTAAGGCATGCACTTTGATGTGGGTCGCCTCAGTAAGGTGCAAGGCGAGATACTTCAGCGACACTCTTCACACTTTTTAAAACTATGTTGTAGCATGTTTTTATGGCTTATGAAGGATGTTTGTCGGGTCAAACAAATATTAATATATTCTTTTGCTACCTTATATTTAGATAGCTGTGGAATTTCCTCATCCATATCAATAACATTAAATAGCTTAGCAAGTAATAATACTCTATTTCTCTCTCCTCCCTTCTCCTGCCTTTTCTATTCTTTGTTGCAACTTAGATTACCCAACATTTTTGCCGGGCTGATGTAATTGGAATCTTGTTCAGCCCTGTGCCTTCAAGTGCATCCGTGTATATAACTTCTTAGGCTTGCCTGTGCATGTCTTATAACAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTTCATCTAGTGGTGGGTTTCTGTACTCCCTTTTAAGCCCAAATTTCAACTTATTTTGAGTTCTTTTCCTTATTTATTCTCTTGTGCAACGGTCATGTTTATATTATAACACTGTTTTAGTATATTCCTCAGAACATTACTAATCATAGCAATTAAGCATGTTTTATTATTCTTATTATATCGACCCTCTTAAATAGATACTATTGTTTTTGTAGTAAATGCATTTACCCTTTTGTTCCCTCGCACTCATGGATCAGTGGTAATATAGGCATTGGCATTGGCATGTCAACACAATTCTAGTGTCAAATTTAAATTTAGGGAGAGAAACTAGTGCAGTTTTGATATGGTGTTCTTTTGCCTTTCATCTTAAATGGAGGACGCGTTCTTATTTTTTCACTGTTGCCCAAATGTTATATATACAATCTTTTAGAGGTTACGTTTCTTTCTTCTGGACTTGTATGATGACAGTGTCTTGCATGGGAAAATTTAGAACATCTCTTCAACCTTTTTATTCTTGCTTCTCCTCATGCTTTAGCATCTTTTTTTTCCATTTTAGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACCGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGCGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAGGATATGGACTAATTAGATGCCATCTGATTTTGTTGAGTCTTTAGTGAATATGGTTATTGAAGCATTTGAAATGATGTAGCTTGTGTTCTTCTAAAACATCCTCTCCTGTTTGTTCTCCTGCTTCTTCTTGTTTGTCACAACTCAATGTAATTGAATTGCCTGATTCTGTTCGACCCAAACTACTGCATTTCATAAGAACCTATCTCATTCGAGGTTCGGTTGTCGATCTTGAAACTCAATATTATGTGGTAAATCGATCTTGTTTCCATTCTGCAGGTGAA

mRNA sequence

TATCATCATCACTTCTCCAGGTTCCCGCGAGACGAAGCCCTAACTTCCCATTCTCTCTGTGTTTCACTTTCTTGTTCCATTTTCTTTGACATAATCAAGAGCGGGAAAGCAAATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAAAGAACCCAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGCGACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACCAAACGTTCATTGAATCCCACTGAAGCACCACGATCACGATCTTATTTTCAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTTCATCTAGTGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACCGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGCGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAGGATATGGACTAATTAGATGCCATCTGATTTTGTTGAGTCTTTAGTGAATATGGTTATTGAAGCATTTGAAATGATGTAGCTTGTGTTCTTCTAAAACATCCTCTCCTGTTTGTTCTCCTGCTTCTTCTTGTTTGTCACAACTCAATGTAATTGAATTGCCTGATTCTGTTCGACCCAAACTACTGCATTTCATAAGAACCTATCTCATTCGAGGTTCGGTTGTCGATCTTGAAACTCAATATTATGTGGTAAATCGATCTTGTTTCCATTCTGCAGGTGAA

Coding sequence (CDS)

ATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAAAGAACCCAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGCGACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACCAAACGTTCATTGAATCCCACTGAAGCACCACGATCACGATCTTATTTTCAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTTCATCTAGTGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACCGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGCGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAG

Protein sequence

MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

Homology

[Close]

BLAST of Carg08119 vs. NCBI nr
Match: XP_022942670.1 (pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_022942671.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 617.8 bits (1592), Expect = 2.1e-173
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
           EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTE PRSRSYFQHDKRGS
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Carg08119 vs. NCBI nr
Match: XP_023521659.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597.8 bits (1540), Expect = 2.3e-167
Identity = 319/338 (94.38%), Postives = 320/338 (94.67%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRRE RESDS R+RSRFD E SPKRSRRDRK LEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREIRESDSNRHRSRFDGESSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTE PRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPH          ER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Carg08119 vs. NCBI nr
Match: XP_022942672.1 (pre-mRNA-splicing factor CWC25-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 585.5 bits (1508), Expect = 1.2e-163
Identity = 325/338 (96.15%), Postives = 325/338 (96.15%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
           EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTE PRSRSYFQHDKRGS
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKR            GGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKR------------GGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 326

[Close]

BLAST of Carg08119 vs. NCBI nr
Match: XP_023548006.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 583.2 bits (1502), Expect = 5.8e-163
Identity = 312/338 (92.31%), Postives = 313/338 (92.60%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFD+EPSPK            LSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKXXXXXXXXXXXXLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTE PRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPH          ER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Carg08119 vs. NCBI nr
Match: XP_022984546.1 (pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima])

HSP 1 Score: 578.9 bits (1491), Expect = 1.1e-161
Identity = 310/338 (91.72%), Postives = 312/338 (92.31%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFD+EPSPK            LSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKXXXXXXXXXXXXLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+LNPTE PRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPH          ER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 338

[Close]

BLAST of Carg08119 vs. TAIR10
Match: AT3G19650.1 (cyclin-related)

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10
Identity = 99/347 (28.53%), Postives = 142/347 (40.92%), Query Frame = 0


Query: 2   SRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKD--RDQKHELR 61
           +RRE+R+SD +R+RSR                   ++       V D  D  ++ +  LR
Sbjct: 3   TRRESRDSDPRRHRSRXXXXXXXXXXXXXXXXXXXRVLSKKDLDVRDGTDTEKNSRQSLR 62

Query: 62  HEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGG----TKRSLNPTEAPRSRSYFQH 121
                    ++ L LD+H       G+ ++S+++  G    TK + + ++ PRSR Y QH
Sbjct: 63  ---------DAPLELDAH-------GSRKDSEKKHSGHHETTKAAPHLSQVPRSRPYSQH 122

Query: 122 DKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDN 181
           D R S G+V     R  +S RG W           R+                       
Sbjct: 123 DDRRSDGKV----DRRPTSVRGSW-----------RSXXXXXXXXXXXXXXXXXXXXXXX 182

Query: 182 HTRTRDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXX 241
                    + +    A +RKRPAFREKKI       E+ G  ++  +  D         
Sbjct: 183 XXXXXXXXXESDDTQGALSRKRPAFREKKIA------EETGNNTDRTRTEDGKDTNLNNR 242

Query: 242 XXXERG-RDTRYSDKLSKHVTG-DMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRF-- 301
              ER  R   +S++  +   G D    RD+ +          G G        RDRF  
Sbjct: 243 RQNERNWRSNTHSERHERPAMGRDRVWNRDDER----------GAGSRQSYQADRDRFNG 302

Query: 302 GGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
            GR G+  S     +KW HDLF EAN+SP    EE+QIAKVEALLAS
Sbjct: 303 NGRSGFSGSWTRNEKKWDHDLFDEANKSPAKATEEEQIAKVEALLAS 302

[Close]

BLAST of Carg08119 vs. TrEMBL
Match: tr|A0A0A0KV12|A0A0A0KV12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.1e-129
Identity = 262/339 (77.29%), Postives = 284/339 (83.78%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKR+RSRFD+EPSPKRS+RDRK LEEKLSRNSSSHVEDNK+RDQKHELR 
Sbjct: 1   MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRL 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
            GQD  PHESSLAL+S PEGG   GANRNSD R+GGTK S+NPTE PRSRSYFQHD+R +
Sbjct: 61  VGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSN 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRS++S RGWWKDSK+ DK+SDRASGK+ TY SQ+RDE PQ  +ED H    
Sbjct: 121 AGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRH---H 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           DGSSKLEVD+  PARKRPAFREKKIT DNE+ EK  M  ESKK +D H          ER
Sbjct: 181 DGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREER 240

Query: 241 GRDTRYSDKL-SKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA 300
           GRD RYS+KL +KH  GDMASKRDEMKR GY VRERYGNG GGGNYRGRDRFGGRQGY  
Sbjct: 241 GRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRT 300

Query: 301 SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           S GTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Sbjct: 301 S-GTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 335

[Close]

BLAST of Carg08119 vs. TrEMBL
Match: tr|A0A1S3BY17|A0A1S3BY17_CUCME (uncharacterized protein LOC103494816 OS=Cucumis melo OX=3656 GN=LOC103494816 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 4.1e-125
Identity = 258/339 (76.11%), Postives = 279/339 (82.30%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKR+RSRFD+EPSPKRS+RDRK LEEKLSRNSSS VEDNKDRDQKHELR 
Sbjct: 1   MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60

Query: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120
            GQD  PHESSLAL+S PEGG   GANR+SD R+GGTK S+NP E PRSRSYFQHD+R +
Sbjct: 61  VGQDMIPHESSLALESKPEGGAGTGANRSSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRS++S RGWWKDSK+ DK+ DR   KT TY SQ+RDE PQ  +ED H    
Sbjct: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDR---KTITYKSQQRDEKPQAAREDRH---H 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXER 240
           +GSSKLEVD+  PARKRPAFREKKIT DNE+ EK  M  ESKK SD H          ER
Sbjct: 181 EGSSKLEVDTLTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREER 240

Query: 241 GRDTRYSDKL-SKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA 300
           GRDTRYS+KL +KH  GDMASKRDEMKR GY VRERYGNG GGGNYRGRDRFGGRQGY  
Sbjct: 241 GRDTRYSEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRT 300

Query: 301 SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           S GTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Sbjct: 301 S-GTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332

[Close]

BLAST of Carg08119 vs. TrEMBL
Match: tr|A0A2R6RC70|A0A2R6RC70_ACTCH (DEAD-box ATP-dependent RNA helicase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07428 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.7e-66
Identity = 172/340 (50.59%), Postives = 221/340 (65.00%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRRE R+SDSKR+RS+FD+EPSPKRSRRD KP  E+ S N +  + ++  RDQKH  R 
Sbjct: 1   MSRREGRDSDSKRHRSKFDREPSPKRSRRDGKPATERPSSNLNLDIGNHSGRDQKH--RR 60

Query: 61  EGQDATPHESSLALDSHPE-GGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRG 120
             QDA P E   A D   E GG SK  ++ ++E+  G K S N TE P+S+S+FQHD+RG
Sbjct: 61  RLQDALPLEVPRASDPKVETGGGSKEFDKRTNEQREGNKNSSNATEVPQSQSFFQHDERG 120

Query: 121 SAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRT 180
           +A QVGR+ GR + S R  W+DSK  D++++RA  KT T + ++RDE  Q    DN    
Sbjct: 121 NARQVGRTTGRGAVSDRR-WRDSK--DQHNERAVEKTTTRDKEQRDEKSQARGADNRVWR 180

Query: 181 RDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXE 240
            DG  ++E D + PARKRP+FREKK+  D+EN +KA   ++  KP+ P           +
Sbjct: 181 HDGFYEIEADQAPPARKRPSFREKKVEVDSENTDKA--PAQPVKPTHPEPTLVGGERRVD 240

Query: 241 R-GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYP 300
           R G + R+SD+  K   GD  + + E  RG +S R+RY   GG  NYR R+RF G +GY 
Sbjct: 241 RGGHNPRFSDRPGKPFLGDREANKGEAHRGSFSSRDRY---GGNSNYRDRERFNGTRGYH 300

Query: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
             GG RVEKWKHDLF E NRSPTPK EEDQIAKVEALLAS
Sbjct: 301 LGGGVRVEKWKHDLFEEGNRSPTPKKEEDQIAKVEALLAS 330

[Close]

BLAST of Carg08119 vs. TrEMBL
Match: tr|A0A2R6R1Z3|A0A2R6R1Z3_ACTCH (Pre-mRNA-splicing factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11298 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.3e-65
Identity = 171/340 (50.29%), Postives = 216/340 (63.53%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRRE R+SDSKR+RS+FD+EPSPKRSRRD KP  E+ S N +  V D  DRDQKH  R 
Sbjct: 1   MSRREGRDSDSKRHRSKFDREPSPKRSRRDGKPATERPSSNLNLDVGDRSDRDQKH--RR 60

Query: 61  EGQDATPHESSLALDSHPEG-GVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRG 120
             QDA P E   A D   E  G SK  ++  + +  G K S N TE PRSRS+F HD+RG
Sbjct: 61  RLQDALPLEVPPASDPKVEAVGGSKEFDKRINGQREGNKNSSNATEVPRSRSFFLHDERG 120

Query: 121 SAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRT 180
           + GQV R+  R ++S R  W+DSK  D++++RA+GKT   +++RRDE  QT   DN    
Sbjct: 121 NGGQVSRTADRRAASDRR-WRDSK--DQHTERAAGKTTPRDTERRDEKSQTRGVDNRVWR 180

Query: 181 RDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXE 240
            DG  ++E D + P RKRP+FREKK+  D+EN +KA   +   KP+ P           E
Sbjct: 181 HDGFYEIEADQAPPVRKRPSFREKKVEVDSENADKA--PAHPVKPTHPEPPLLGGERRVE 240

Query: 241 R-GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYP 300
           R G +  +SD+  K   GD  + + E +RG +  R+RY +     NYRGR+RF G +GY 
Sbjct: 241 RGGHNPHFSDRSEKPFVGDREANKGEAQRGSFPSRDRYDD---NSNYRGRERFNGTRGYR 300

Query: 301 ASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
             GG RVEKWKHDLF E NRSPTPK EEDQIAKVEALLAS
Sbjct: 301 PGGGVRVEKWKHDLFEEGNRSPTPKKEEDQIAKVEALLAS 330

[Close]

BLAST of Carg08119 vs. TrEMBL
Match: tr|M5VL67|M5VL67_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G144600 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 170/339 (50.15%), Postives = 223/339 (65.78%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRR++R+SDS+R+RSRFD+EPSPKRSRRD K  +E+++   +S      D+DQKH+ R 
Sbjct: 1   MSRRDSRDSDSRRHRSRFDREPSPKRSRRDGKDEKERVTSKINSESAKQSDQDQKHQPRL 60

Query: 61  EGQDATPHESSLALDSHPEGGVS-KGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRG 120
             QD  P ES LA DS  E G S K +++       GTK S +PT+ PRS+SYFQHD+RG
Sbjct: 61  --QDTLPLESPLATDSRVENGASRKESDKKPSGHLEGTKLSSDPTDVPRSQSYFQHDERG 120

Query: 121 SAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRT 180
           +A QV RS  R S++ RG W+DSK  D++ DR   KT T +S+ R+E P+   ++N T  
Sbjct: 121 NARQVDRSSRRGSAAERGSWRDSK--DRHDDRTVSKTTTNDSRPRNEKPK--GDENRTWR 180

Query: 181 RDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHXXXXXXXXXXE 240
            +G  ++E  +  P RKRPAFREKKI+ ++EN +K    +E+ K +  H          E
Sbjct: 181 HNGFFEMEA-NPPPERKRPAFREKKISLESENGDKT--TAETAKSN--HPDAEGSRKREE 240

Query: 241 RGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA 300
           RG + R+ D+  K   G+    R + +RG +  RERY   G   NYRGRDRF GRQG+ +
Sbjct: 241 RGNNPRHLDRSEKQFAGERLPYRGDAQRGSFPSRERY-TDGASRNYRGRDRFSGRQGFQS 300

Query: 301 SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
           SGG R EKWKHDL+HEANRSPTPKNEEDQIAKVE LLAS
Sbjct: 301 SGG-RGEKWKHDLYHEANRSPTPKNEEDQIAKVETLLAS 326

The following BLAST results are available for this feature:

BLAST of Carg08119 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942670.1	2.1e-173	99.70	pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_02294267...	[more]
XP_023521659.1	2.3e-167	94.38	pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942672.1	1.2e-163	96.15	pre-mRNA-splicing factor CWC25-like isoform X2 [Cucurbita moschata]	[more]
XP_023548006.1	5.8e-163	92.31	pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1...	[more]
XP_022984546.1	1.1e-161	91.72	pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg08119 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19650.1	3.6e-10	28.53	cyclin-related	[more]

BLAST of Carg08119 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08119 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KV12\|A0A0A0KV12_CUCSA	2.1e-129	77.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1	[more]
tr\|A0A1S3BY17\|A0A1S3BY17_CUCME	4.1e-125	76.11	uncharacterized protein LOC103494816 OS=Cucumis melo OX=3656 GN=LOC103494816 PE=...	[more]
tr\|A0A2R6RC70\|A0A2R6RC70_ACTCH	5.7e-66	50.59	DEAD-box ATP-dependent RNA helicase OS=Actinidia chinensis var. chinensis OX=159...	[more]
tr\|A0A2R6R1Z3\|A0A2R6R1Z3_ACTCH	6.3e-65	50.29	Pre-mRNA-splicing factor like OS=Actinidia chinensis var. chinensis OX=1590841 G...	[more]
tr\|M5VL67\|M5VL67_PRUPE	1.7e-62	50.15	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G144600 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08119-RA	Carg08119-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..151
None	No IPR available	PANTHER	PTHR36364	FAMILY NOT NAMED	coord: 1..338

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08119	Cla006436	Watermelon (97103) v1	carwmB0366
Carg08119	Csa4G000750	Cucumber (Chinese Long) v2	carcuB0402
Carg08119	MELO3C018010	Melon (DHL92) v3.5.1	carmeB0383
Carg08119	ClCG10G010280	Watermelon (Charleston Gray)	carwcgB0365
Carg08119	CSPI04G00240	Wild cucumber (PI 183967)	carcpiB0407
Carg08119	Cucsa.298350	Cucumber (Gy14) v1	carcgyB0439
Carg08119	CmaCh16G003160	Cucurbita maxima (Rimu)	carcmaB0526
Carg08119	CmaCh04G004490	Cucurbita maxima (Rimu)	carcmaB0529
Carg08119	CmoCh04G004810	Cucurbita moschata (Rifu)	carcmoB0514
Carg08119	CmoCh16G003350	Cucurbita moschata (Rifu)	carcmoB0509
Carg08119	Lsi03G010180	Bottle gourd (USVL1VR-Ls)	carlsiB341
Carg08119	Cp4.1LG01g02630	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08119	MELO3C018010.2	Melon (DHL92) v3.6.1	carmedB0387
Carg08119	CsaV3_4G000230	Cucumber (Chinese Long) v3	carcucB0406
Carg08119	Cla97C10G193230	Watermelon (97103) v2	carwmbB0391
Carg08119	Bhi11G000932	Wax gourd	carwgoB0456

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08119	Carg19689	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08119	Silver-seed gourd	carcarB217
Carg08119	Silver-seed gourd	carcarB401
Carg08119	Silver-seed gourd	carcarB402
Carg08119	Silver-seed gourd	carcarB404
Carg08119	Cucumber (Gy14) v2	carcgybB0383
Carg08119	Cucumber (Gy14) v2	carcgybB0388
Carg08119	Cucumber (Gy14) v2	carcgybB0389
Carg08119	Cucumber (Gy14) v1	carcgyB0433
Carg08119	Cucurbita maxima (Rimu)	carcmaB0528
Carg08119	Cucurbita maxima (Rimu)	carcmaB0525
Carg08119	Cucurbita moschata (Rifu)	carcmoB0508
Carg08119	Cucurbita moschata (Rifu)	carcmoB0516
Carg08119	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08119	Cucurbita pepo (Zucchini)	carcpeB0526
Carg08119	Cucurbita pepo (Zucchini)	carcpeB0529
Carg08119	Cucumber (Chinese Long) v2	carcuB0407
Carg08119	Cucumber (Chinese Long) v2	carcuB0409
Carg08119	Cucumber (Chinese Long) v2	carcuB0410
Carg08119	Cucumber (Chinese Long) v3	carcucB0410
Carg08119	Bottle gourd (USVL1VR-Ls)	carlsiB340
Carg08119	Bottle gourd (USVL1VR-Ls)	carlsiB342
Carg08119	Melon (DHL92) v3.5.1	carmeB0386
Carg08119	Melon (DHL92) v3.6.1	carmedB0390
Carg08119	Watermelon (Charleston Gray)	carwcgB0368
Carg08119	Watermelon (97103) v1	carwmB0375
Carg08119	Watermelon (97103) v2	carwmbB0394
Carg08119	Watermelon (97103) v2	carwmbB0399
Carg08119	Wax gourd	carwgoB0464
Carg08119	Wax gourd	carwgoB0466