CmoCh16G001940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G001940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant invertase/pectin methylesterase inhibitor
Location	Cmo_Chr16 : 863688 .. 864546 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACACGACCCTCATAGATTCTATACGCAGAGATATAATGAAATCCTTGCTAATCCTTTTCTTCTTCATTTTAACTGCCACATTCACCACCTCCGCCGTGCCTTCTTCTCCCTCCGCCGTGCCTTCTTCTTCCTCCGCCATTCAGCCGGTGAAACCACACATCAAAAAGGCCTGCAGGCCGACGCCATATCCACGCCTTTGCGAGACCGCGCTCTCCTTATATTCTTCACAAACCAAAACAACCCAACAAGAGCTTTGTAGGGCTGCCGTGGTTTCTTCCCTCAAAGCTGCACAAAACGCCACCTCCATAATCTCCAAATTATCTCGCCGGAAGGTGTCGCCCTATGAAGCCGAGGTCATCGGAGATTGCATCGATAATCTCAAAGACTCCGTCTACGAGCTTCGTAGAGCTACCACTGCTATCAAAAGTTTGAATCGTGCTAACAACGTGGAGTTTCAGGTTGTTAATCATAAACTTTCAATTTCATCCGATTACTTTAAATTAGATTCTAATGAATATGTTCTTAACCAGTTGAGTAGTATCAAGACGTGGTTGAGCGCGGCAGGGACCGACATTGTGACATGCACCGATGGGTTGAGCGGGGGCGCGGGGTGGAAGGTGAGATCGACGGTGAAGAAAGAGGTGAAGAAATGTAGTGTGAATGTAATAAGGCAGACTAGTAACGCCTTGTCTCTCATTAGCAACTTGAAGTACAAATGATGAGGTGAGTTTTAGAAGAAACATCGTGAGAAGATGTTTGATGAATGAATTATTATGATATATAGTTGCAGCTTTTAATCTTGTTTACAACCCTTTTAAAACTATATAATATAATTTCATTAAAACTATATAATTGAG

mRNA sequence

TAACACGACCCTCATAGATTCTATACGCAGAGATATAATGAAATCCTTGCTAATCCTTTTCTTCTTCATTTTAACTGCCACATTCACCACCTCCGCCGTGCCTTCTTCTCCCTCCGCCGTGCCTTCTTCTTCCTCCGCCATTCAGCCGGTGAAACCACACATCAAAAAGGCCTGCAGGCCGACGCCATATCCACGCCTTTGCGAGACCGCGCTCTCCTTATATTCTTCACAAACCAAAACAACCCAACAAGAGCTTTGTAGGGCTGCCGTGGTTTCTTCCCTCAAAGCTGCACAAAACGCCACCTCCATAATCTCCAAATTATCTCGCCGGAAGGTGTCGCCCTATGAAGCCGAGGTCATCGGAGATTGCATCGATAATCTCAAAGACTCCGTCTACGAGCTTCGTAGAGCTACCACTGCTATCAAAAGTTTGAATCGTGCTAACAACGTGGAGTTTCAGTTGAGTAGTATCAAGACGTGGTTGAGCGCGGCAGGGACCGACATTGTGACATGCACCGATGGGTTGAGCGGGGGCGCGGGGTGGAAGGTGAGATCGACGGTGAAGAAAGAGGTGAAGAAATGTAGTGTGAATGTAATAAGGCAGACTAGTAACGCCTTGTCTCTCATTAGCAACTTGAAGTACAAATGATGAGGTGAGTTTTAGAAGAAACATCGTGAGAAGATGTTTGATGAATGAATTATTATGATATATAGTTGCAGCTTTTAATCTTGTTTACAACCCTTTTAAAACTATATAATATAATTTCATTAAAACTATATAATTGAG

Coding sequence (CDS)

ATGAAATCCTTGCTAATCCTTTTCTTCTTCATTTTAACTGCCACATTCACCACCTCCGCCGTGCCTTCTTCTCCCTCCGCCGTGCCTTCTTCTTCCTCCGCCATTCAGCCGGTGAAACCACACATCAAAAAGGCCTGCAGGCCGACGCCATATCCACGCCTTTGCGAGACCGCGCTCTCCTTATATTCTTCACAAACCAAAACAACCCAACAAGAGCTTTGTAGGGCTGCCGTGGTTTCTTCCCTCAAAGCTGCACAAAACGCCACCTCCATAATCTCCAAATTATCTCGCCGGAAGGTGTCGCCCTATGAAGCCGAGGTCATCGGAGATTGCATCGATAATCTCAAAGACTCCGTCTACGAGCTTCGTAGAGCTACCACTGCTATCAAAAGTTTGAATCGTGCTAACAACGTGGAGTTTCAGTTGAGTAGTATCAAGACGTGGTTGAGCGCGGCAGGGACCGACATTGTGACATGCACCGATGGGTTGAGCGGGGGCGCGGGGTGGAAGGTGAGATCGACGGTGAAGAAAGAGGTGAAGAAATGTAGTGTGAATGTAATAAGGCAGACTAGTAACGCCTTGTCTCTCATTAGCAACTTGAAGTACAAATGA

Homology

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BLAST of CmoCh16G001940 vs. Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19
Identity = 61/177 (34.46%), Postives = 104/177 (58.76%), Query Frame = 1


Query: 31  SSSAIQPVKPHIKKACRPTPYPRLCETALSLYSSQTKTTQQELCRAAVVSSLKAAQNATS 90
           ++++  P    IK +C  T YP +CE +LS Y+   +   QEL   A+  SL   Q A +
Sbjct: 18  AAASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQT 77

Query: 91  IISKLSRRK-VSPYEAEVIGDCIDNLKDSVYELRRATTAIKSLNRA--NNVEFQLSSIKT 150
            + +L++ K +   +   I DC++ ++DS+  + R+   +K+L+ A  N+  F++S+++T
Sbjct: 78  FMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVET 137

Query: 151 WLSAAGTDIVTCTDGLSG-GAGWKVRSTVKKEVKKCSVNVIRQTSNALSLISNLKYK 204
           W+SAA TD  TC DG +G G   K++ +V+ +V    V V R TSNAL+L++N   K
Sbjct: 138 WVSAALTDETTCMDGFAGKGMDGKIKESVRAQV----VAVARVTSNALALVNNFAAK 190

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BLAST of CmoCh16G001940 vs. Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 8.7e-09
Identity = 57/200 (28.50%), Postives = 99/200 (49.50%), Query Frame = 1


Query: 4   LLILFFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLYS 63
           LL+     + AT T        + + S+S AI      +K  C  T YP LC +A++   
Sbjct: 30  LLLASIVGIAATTTNQNKNQKITTLSSTSHAI------LKSVCSSTLYPELCFSAVAATG 89

Query: 64  SQTKTTQQELCRAAVVSSLKAAQNATSIISKL--SRRKVSPYEAEVIGDCIDNLKDSVYE 123
            +  T+Q+E+  A++  + KA ++    + KL   R+ ++P E   + DC++ + +++ E
Sbjct: 90  GKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDE 149

Query: 124 LRRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLS-GGAGWKVRSTVKKEVK 183
           L  A   +    +  ++      +KT +S+A T+  TC DG S   A  KVR    K + 
Sbjct: 150 LHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVR----KALL 209

Query: 184 KCSVNVIRQTSNALSLISNL 201
           K  V+V    SNAL++I N+
Sbjct: 210 KGQVHVEHMCSNALAMIKNM 219

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BLAST of CmoCh16G001940 vs. TrEMBL
Match: A0A0A0L671_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176250 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.1e-74
Identity = 148/199 (74.37%), Postives = 174/199 (87.44%), Query Frame = 1


Query: 5   LILFFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSS 64
           L++FFFI+  TFT       PSAV SSSS ++PV+PHI+KAC+PTPYPRLCETALSLY+S
Sbjct: 12  LLIFFFIILTTFT-------PSAVSSSSSTVRPVQPHIRKACKPTPYPRLCETALSLYAS 71

Query: 65  QTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRKVSPYEAEVIGDCIDNLKDSVYELRR 124
           QTK  QQELCRAA+VSSLKAAQNATSIISKLSRRK+S YEAEVIGDCIDNLKDSV ELRR
Sbjct: 72  QTKRNQQELCRAAMVSSLKAAQNATSIISKLSRRKMSAYEAEVIGDCIDNLKDSVDELRR 131

Query: 125 ATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKCSV 184
           A+TAIKSL+R+ +V+FQL+SIKTW+SAA TD++TCTDGLSGG+GWKV   +KK+VK CS+
Sbjct: 132 ASTAIKSLSRSKDVDFQLNSIKTWMSAAQTDVITCTDGLSGGSGWKVSKMLKKDVKNCSI 191

Query: 185 NVIRQTSNALSLISNLKYK 204
           NV+RQ SNAL LI+N  YK
Sbjct: 192 NVVRQISNALFLINNFNYK 203

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BLAST of CmoCh16G001940 vs. TrEMBL
Match: M5X0K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011478mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 76/175 (43.43%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 30  SSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSSQTKTTQQELCRAAVVSSLKAAQNAT 89
           ++SS+ Q  K ++K AC  T YP +C  +LS Y+S+ K+  Q+LC  A+  +LKAA+NA+
Sbjct: 37  ATSSSSQTYKTYVKTACNTTTYPLICYKSLSSYASKVKSDPQKLCTYALSVTLKAAKNAS 96

Query: 90  SIISKLSRRK-VSPYEAEVIGDCIDNLKDSVYELRRATTAIKSLN-RANNVEFQLSSIKT 149
           S++SKL +   ++P E  V+ DCI+N+KDS+ EL+++ +++ +L    ++V+ QL  IKT
Sbjct: 97  SVVSKLYKNTGLTPSEKGVVKDCIENIKDSIDELKQSVSSMSNLGVSGSDVQLQLDDIKT 156

Query: 150 WLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKCSVNVIRQTSNALSLISNLKY 203
           W+SA  TD  TCTDG     G KV + VK  ++   VN  R  SNALSLI +L Y
Sbjct: 157 WVSAVITDDATCTDGFD---GVKVSAAVKTAIRNSIVNAARLASNALSLIDSLIY 208

[Close]

BLAST of CmoCh16G001940 vs. TrEMBL
Match: B9R9Q8_RICCO (21 kDa protein, putative OS=Ricinus communis GN=RCOM_1500020 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-27
Identity = 83/201 (41.29%), Postives = 127/201 (63.18%), Query Frame = 1


Query: 3   SLLILFFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLY 62
           S L L  F++  + T +++     A+ ++ ++    K ++K AC  T YP++C   LS Y
Sbjct: 14  STLFLITFLVFISNTQNSL-----AITTTKTSKTTYKNYLKTACNSTTYPKICYNTLSPY 73

Query: 63  SSQTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRK-VSPYEAEVIGDCIDNLKDSVYE 122
           +S  +T   +LC AA+  +LKAA N ++++  LS++K +S  E  VI DC   ++DSV E
Sbjct: 74  TSTIQTNDLKLCNAALTITLKAASNTSAMVKSLSKQKGLSKGEVAVIKDCQYEIEDSVDE 133

Query: 123 LRRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKK 182
           L+++  A+K+L  + ++EFQ+ +IKTW+SAA TD  TCTDG     G KV S VK ++KK
Sbjct: 134 LKQSLKALKNLKGSADMEFQIDNIKTWISAAITDENTCTDGFE---GMKVSSKVKSKIKK 193

Query: 183 CSVNVIRQTSNALSLISNLKY 203
             VNV R TSNAL+LI+ L Y
Sbjct: 194 SIVNVNRLTSNALALINKLSY 206

[Close]

BLAST of CmoCh16G001940 vs. TrEMBL
Match: A0A067JEZ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26238 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 78/203 (38.42%), Postives = 122/203 (60.10%), Query Frame = 1


Query: 3   SLLILFFFILTATFTTSAVPSSPSAVPSSSSAIQPV--KPHIKKACRPTPYPRLCETALS 62
           S+ +L  F+L+     S + SS +A P +++       K ++K AC  T YP+LC  +LS
Sbjct: 10  SINLLITFLLSCLLLISNIQSSVAATPVTTTKTSKTVYKNYLKTACNTTTYPKLCYNSLS 69

Query: 63  LYSSQTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRK-VSPYEAEVIGDCIDNLKDSV 122
            Y+S  KT    LC  A+  ++K A+N + +I +LS+RK +S  EA VI DC D + DS+
Sbjct: 70  PYTSTIKTNDLSLCNTALTITVKVAKNTSGLIKELSKRKGLSKSEAAVIKDCKDEISDSI 129

Query: 123 YELRRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEV 182
            EL++A  A+ SL  +N+  + +  IKT++SAA T+  TC DG     G KV ++++ ++
Sbjct: 130 DELKQAIKALASLKSSNSTAYVIDDIKTYVSAAITNDYTCLDGFE---GMKVSASLQSKI 189

Query: 183 KKCSVNVIRQTSNALSLISNLKY 203
           KK   N    TSNAL+LI+ L+Y
Sbjct: 190 KKSVTNFASLTSNALALINKLEY 209

[Close]

BLAST of CmoCh16G001940 vs. TrEMBL
Match: A0A067JJ47_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25384 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-25
Identity = 80/201 (39.80%), Postives = 129/201 (64.18%), Query Frame = 1


Query: 4   LLILFFFILTATFTTSAVPSSPSAVPSSSSAIQP----VKPHIKKACRPTPYPRLCETAL 63
           LL+ F   ++ T  T+A  ++ +   ++++A +      + ++K AC+ T YP+LC ++L
Sbjct: 12  LLLTFVLFISNTKNTAASTTATATTTTTTAATKTSNKTYRNYLKTACKSTTYPKLCYSSL 71

Query: 64  SLYSSQTKTTQQELCRAAVVSSLKAAQNATSIISKLS-RRKVSPYEAEVIGDCIDNLKDS 123
           S YSS  KT    LC  A+  SL+ + N +  ++ LS ++++S  EAEV+ DCID + DS
Sbjct: 72  SSYSSIIKTDDLILCTTALNVSLQISINTSYFMTDLSNQQELSETEAEVVQDCIDEIGDS 131

Query: 124 VYELRRATTAIKSLN-RANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKK 183
           +YEL ++ + + SL+  +++V FQ+S+IKTW+SAA TD   CTDG     G KV S VK 
Sbjct: 132 IYELNQSLSDLSSLDFNSSDVRFQISNIKTWVSAAITDDYGCTDGFD---GTKVSSAVKS 191

Query: 184 EVKKCSVNVIRQTSNALSLIS 199
           ++KK  +NV R TSNAL+L++
Sbjct: 192 KIKKAILNVSRITSNALALVN 209

[Close]

BLAST of CmoCh16G001940 vs. TAIR10
Match: AT5G51520.1 (AT5G51520.1 Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-24
Identity = 73/203 (35.96%), Postives = 114/203 (56.16%), Query Frame = 1


Query: 10  FILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSSQTKTT 69
           + LT  F   A  +      S+SS  Q  K  +K AC  T YP  C  +LS YSS  K+ 
Sbjct: 6   YSLTIVFVFFASTNIQKTSGSASSYSQNHKTFVKTACNSTTYPDKCYKSLSSYSSNIKSD 65

Query: 70  QQELCRAAVVSSLKAAQNATSIISKL----------SRRKVSPYEAEVIGDCIDNLKDSV 129
             +LC  A+  ++K+A+ ATS++SKL           + K+ P EA ++ DC++ +KD++
Sbjct: 66  PIKLCTTALNLNVKSAKEATSVVSKLLKMSQKSTAGRKGKMLP-EALILKDCLEEMKDTI 125

Query: 130 YELRRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEV 189
            EL++A T +K+L    ++   +++++TW+S+A TD  TCTDG       KV    KK+V
Sbjct: 126 IELKQAITEMKNLQDGGSMAEHITNVRTWVSSALTDEGTCTDGFE---EVKVNKETKKKV 185

Query: 190 KKCSVNVIRQTSNALSLISNLKY 203
            K    +   TSN L+LI+NL+Y
Sbjct: 186 NKVVEELATTTSNTLALITNLRY 204

[Close]

BLAST of CmoCh16G001940 vs. TAIR10
Match: AT4G25250.1 (AT4G25250.1 Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 65/198 (32.83%), Postives = 107/198 (54.04%), Query Frame = 1


Query: 6   ILFFFILTATFTTSAVPSS-PSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSS 65
           +L F +L+ T       S+ P    +     Q    ++K AC  T YP +C   LS YSS
Sbjct: 1   MLRFVVLSLTLMVFINSSNFPKTAATPPGTYQNHTTYVKTACNSTTYPTMCYNCLSSYSS 60

Query: 66  QTKTTQQELCRAAVVSSLKAAQNATSIISKL--SRRKVSPYEAEVIGDCIDNLKDSVYEL 125
             K+   +LC  ++  ++K+A+NAT ++S L    +    +E  ++ DC+D +KD++ EL
Sbjct: 61  TIKSDPIKLCTTSLNLNVKSAKNATLVVSNLLQKAKAAKSHEVSILKDCVDEMKDTIDEL 120

Query: 126 RRATTAIKSL-NRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKK 185
           ++A   +K +       E  L ++KTW+S+A TD  TCTDG   G   +V    KK+VKK
Sbjct: 121 KQAVAEMKYVRGGGKTTEEHLKNVKTWVSSALTDEGTCTDGFEEG---RVNVETKKKVKK 180

Query: 186 CSVNVIRQTSNALSLISN 200
               + + TSN L+L+++
Sbjct: 181 AISELSKTTSNTLALLTH 195

[Close]

BLAST of CmoCh16G001940 vs. TAIR10
Match: AT5G62360.1 (AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 55/158 (34.81%), Postives = 97/158 (61.39%), Query Frame = 1


Query: 42  IKKACRPTPYPRLCETALSLYSSQTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRKVS 101
           +K +C  T YPRLC ++LS ++S  +T+ + +  AA+  +L +A+  ++++ +LS  ++ 
Sbjct: 44  VKSSCTFTTYPRLCFSSLSTHASLIQTSPKLMAHAALNITLASAKVTSAMMVRLSNSRLK 103

Query: 102 PYEAEVIGDCIDNLKDSVYELRRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTD 161
           P E   + DC++ L D++ ELR++   +  L+  +N E  +S I+TW+SAA TD+ TCTD
Sbjct: 104 PKEVSAMRDCVEELGDTLEELRKSIGEMCQLS-GSNYEVYISDIQTWVSAALTDVNTCTD 163

Query: 162 GLSGGAGWKVRSTVKKEVKKCSVNVIRQTSNALSLISN 200
           G  G     +   VK  V+   + +   TSNAL+LI++
Sbjct: 164 GFEGE---DMDGKVKVLVRGRILVIAHLTSNALALINH 197

[Close]

BLAST of CmoCh16G001940 vs. TAIR10
Match: AT5G62350.1 (AT5G62350.1 Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 3.7e-18
Identity = 60/195 (30.77%), Postives = 106/195 (54.36%), Query Frame = 1


Query: 8   FFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSSQTK 67
           + F+L +     ++  + +   S + A +     I+ +C+ T YP LC  +LS+Y++  +
Sbjct: 5   YLFVLLSISYLLSLELTAATAASQTGASKKAINFIQSSCKTTTYPALCVHSLSVYANDIQ 64

Query: 68  TTQQELCRAAVVSSLKAAQNATSIISKLSRRK-VSPYEAEVIGDCIDNLKDSVYELRRAT 127
           T+ + L   A+  +L  AQ+    +S+L+R K +   E E I DC++ + D+V  L ++ 
Sbjct: 65  TSPKRLAETAIAVTLSRAQSTKLFVSRLTRMKGLKKREVEAIKDCVEEMNDTVDRLTKSV 124

Query: 128 TAIKSLNRANNVE---FQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKCS 187
             +K    A + +   + +S+ +TW SAA TD  TC+DG SG     +   +K  V+   
Sbjct: 125 QELKLCGSAKDQDQFAYHMSNAQTWTSAALTDENTCSDGFSGRV---MDGRIKNSVRARI 184

Query: 188 VNVIRQTSNALSLIS 199
           +NV  +TSNALSLI+
Sbjct: 185 MNVGHETSNALSLIN 196

[Close]

BLAST of CmoCh16G001940 vs. TAIR10
Match: AT1G62760.1 (AT1G62760.1 Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 63/197 (31.98%), Postives = 106/197 (53.81%), Query Frame = 1


Query: 19  SAVPSSPSAVPSSSSAIQPVKP--------------HIKKACRPTPYPRLCETALSLYSS 78
           S  PSSP   P SSS +  + P              +IK +C  T Y  +C  +LS Y+S
Sbjct: 111 SLSPSSPPPPPPSSSPLSSLSPSSSSSTYSNQTNLDYIKTSCNITLYKTICYNSLSPYAS 170

Query: 79  QTKTTQQELCRAAVVSSLKAAQNATSIISKLSR-RKVSPYEAEVIGDCIDNLKDSVYELR 138
             ++  Q+L   A+  +L +A++A+  +  +S    ++  E   + DC++ + DSV  L+
Sbjct: 171 TIRSNPQKLAVIALNLTLSSAKSASKFVKNISHGGGLTRLEVVAVADCVEEIGDSVTSLQ 230

Query: 139 RATTAIKSLNRANNVEFQ--LSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKK 198
            +   + S+N  ++ +F+  +S ++TW+SAA T+  TC DG S      V++ VK  V++
Sbjct: 231 DSIRELDSINYKDSAKFEMVMSDVETWVSAALTNDDTCMDGFS-----LVKTAVKDLVRR 290

[Close]

BLAST of CmoCh16G001940 vs. NCBI nr
Match: gi|659077238|ref|XP_008439099.1| (PREDICTED: 21 kDa protein-like [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-74
Identity = 152/201 (75.62%), Postives = 173/201 (86.07%), Query Frame = 1


Query: 3   SLLILFFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLY 62
           SL + FFFI+  TFT       PSAV SSSS ++PVKPHI+KAC+PTPYPRLCETALSLY
Sbjct: 9   SLTLFFFFIILTTFT-------PSAVASSSSTVRPVKPHIRKACKPTPYPRLCETALSLY 68

Query: 63  SSQTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRKVSPYEAEVIGDCIDNLKDSVYEL 122
           +SQTK  QQELCRAA+VSSLKAAQNATSIISKLSRRK+S YE EVIGDCID+LKDSV EL
Sbjct: 69  ASQTKRNQQELCRAAMVSSLKAAQNATSIISKLSRRKMSAYETEVIGDCIDDLKDSVDEL 128

Query: 123 RRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKC 182
           RRA+TAIKSL+R+ +V+FQL+SIKTW SAA TDI+TCTDGLSGG+GWKV   VKKEVK C
Sbjct: 129 RRASTAIKSLSRSKDVDFQLNSIKTWTSAALTDIITCTDGLSGGSGWKVNKKVKKEVKNC 188

Query: 183 SVNVIRQTSNALSLISNLKYK 204
           S+NV+RQ SNALSLI+N  YK
Sbjct: 189 SINVVRQISNALSLINNFNYK 202

[Close]

BLAST of CmoCh16G001940 vs. NCBI nr
Match: gi|449460810|ref|XP_004148137.1| (PREDICTED: 21 kDa protein-like [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 5.9e-74
Identity = 148/199 (74.37%), Postives = 174/199 (87.44%), Query Frame = 1


Query: 5   LILFFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSS 64
           L++FFFI+  TFT       PSAV SSSS ++PV+PHI+KAC+PTPYPRLCETALSLY+S
Sbjct: 12  LLIFFFIILTTFT-------PSAVSSSSSTVRPVQPHIRKACKPTPYPRLCETALSLYAS 71

Query: 65  QTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRKVSPYEAEVIGDCIDNLKDSVYELRR 124
           QTK  QQELCRAA+VSSLKAAQNATSIISKLSRRK+S YEAEVIGDCIDNLKDSV ELRR
Sbjct: 72  QTKRNQQELCRAAMVSSLKAAQNATSIISKLSRRKMSAYEAEVIGDCIDNLKDSVDELRR 131

Query: 125 ATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKCSV 184
           A+TAIKSL+R+ +V+FQL+SIKTW+SAA TD++TCTDGLSGG+GWKV   +KK+VK CS+
Sbjct: 132 ASTAIKSLSRSKDVDFQLNSIKTWMSAAQTDVITCTDGLSGGSGWKVSKMLKKDVKNCSI 191

Query: 185 NVIRQTSNALSLISNLKYK 204
           NV+RQ SNAL LI+N  YK
Sbjct: 192 NVVRQISNALFLINNFNYK 203

[Close]

BLAST of CmoCh16G001940 vs. NCBI nr
Match: gi|645257369|ref|XP_008234383.1| (PREDICTED: 21 kDa protein-like [Prunus mume])

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27
Identity = 77/175 (44.00%), Postives = 114/175 (65.14%), Query Frame = 1


Query: 30  SSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSSQTKTTQQELCRAAVVSSLKAAQNAT 89
           ++SS+ Q  K ++K AC  T YP +C  +LS Y+S+ K+   +LC  A+  +LKAA+NA+
Sbjct: 37  ATSSSSQTYKSYVKTACNTTTYPLICYKSLSSYASKVKSDPHKLCTYALSVTLKAAKNAS 96

Query: 90  SIISKLSRRK-VSPYEAEVIGDCIDNLKDSVYELRRATTAIKSLN-RANNVEFQLSSIKT 149
           S++SKL +   ++P E  V+ DCIDN+KDS+ EL+++ +++ +L    ++V+ QL  IKT
Sbjct: 97  SVVSKLYKNTGLTPSEKGVVKDCIDNIKDSIDELKQSVSSMSNLGVSGSDVQLQLDDIKT 156

Query: 150 WLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKCSVNVIRQTSNALSLISNLKY 203
           W+SA  TD  TCTDG     G KV + VK  +K   VN  R  SNALSLI +L Y
Sbjct: 157 WVSAVITDDATCTDGFD---GVKVSTAVKTAIKNSIVNAARLASNALSLIDSLIY 208

[Close]

BLAST of CmoCh16G001940 vs. NCBI nr
Match: gi|596006013|ref|XP_007218408.1| (hypothetical protein PRUPE_ppa011478mg [Prunus persica])

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27
Identity = 76/175 (43.43%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 30  SSSSAIQPVKPHIKKACRPTPYPRLCETALSLYSSQTKTTQQELCRAAVVSSLKAAQNAT 89
           ++SS+ Q  K ++K AC  T YP +C  +LS Y+S+ K+  Q+LC  A+  +LKAA+NA+
Sbjct: 37  ATSSSSQTYKTYVKTACNTTTYPLICYKSLSSYASKVKSDPQKLCTYALSVTLKAAKNAS 96

Query: 90  SIISKLSRRK-VSPYEAEVIGDCIDNLKDSVYELRRATTAIKSLN-RANNVEFQLSSIKT 149
           S++SKL +   ++P E  V+ DCI+N+KDS+ EL+++ +++ +L    ++V+ QL  IKT
Sbjct: 97  SVVSKLYKNTGLTPSEKGVVKDCIENIKDSIDELKQSVSSMSNLGVSGSDVQLQLDDIKT 156

Query: 150 WLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKKCSVNVIRQTSNALSLISNLKY 203
           W+SA  TD  TCTDG     G KV + VK  ++   VN  R  SNALSLI +L Y
Sbjct: 157 WVSAVITDDATCTDGFD---GVKVSAAVKTAIRNSIVNAARLASNALSLIDSLIY 208

[Close]

BLAST of CmoCh16G001940 vs. NCBI nr
Match: gi|255539737|ref|XP_002510933.1| (PREDICTED: 21 kDa protein [Ricinus communis])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27
Identity = 83/201 (41.29%), Postives = 127/201 (63.18%), Query Frame = 1


Query: 3   SLLILFFFILTATFTTSAVPSSPSAVPSSSSAIQPVKPHIKKACRPTPYPRLCETALSLY 62
           S L L  F++  + T +++     A+ ++ ++    K ++K AC  T YP++C   LS Y
Sbjct: 14  STLFLITFLVFISNTQNSL-----AITTTKTSKTTYKNYLKTACNSTTYPKICYNTLSPY 73

Query: 63  SSQTKTTQQELCRAAVVSSLKAAQNATSIISKLSRRK-VSPYEAEVIGDCIDNLKDSVYE 122
           +S  +T   +LC AA+  +LKAA N ++++  LS++K +S  E  VI DC   ++DSV E
Sbjct: 74  TSTIQTNDLKLCNAALTITLKAASNTSAMVKSLSKQKGLSKGEVAVIKDCQYEIEDSVDE 133

Query: 123 LRRATTAIKSLNRANNVEFQLSSIKTWLSAAGTDIVTCTDGLSGGAGWKVRSTVKKEVKK 182
           L+++  A+K+L  + ++EFQ+ +IKTW+SAA TD  TCTDG     G KV S VK ++KK
Sbjct: 134 LKQSLKALKNLKGSADMEFQIDNIKTWISAAITDENTCTDGFE---GMKVSSKVKSKIKK 193

Query: 183 CSVNVIRQTSNALSLISNLKY 203
             VNV R TSNAL+LI+ L Y
Sbjct: 194 SIVNVNRLTSNALALINKLSY 206

The following BLAST results are available for this feature:

BLAST of CmoCh16G001940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
21KD_DAUCA	3.2e-19	34.46	21 kDa protein OS=Daucus carota PE=2 SV=1	[more]
PME2_ARATH	8.7e-09	28.50	Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2	[more]

BLAST of CmoCh16G001940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L671_CUCSA	4.1e-74	74.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176250 PE=4 SV=1	[more]
M5X0K1_PRUPE	1.3e-27	43.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011478mg PE=4 SV=1	[more]
B9R9Q8_RICCO	1.7e-27	41.29	21 kDa protein, putative OS=Ricinus communis GN=RCOM_1500020 PE=4 SV=1	[more]
A0A067JEZ6_JATCU	3.5e-25	38.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26238 PE=4 SV=1	[more]
A0A067JJ47_JATCU	4.6e-25	39.80	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25384 PE=4 SV=1	[more]

BLAST of CmoCh16G001940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51520.1	7.8e-24	35.96	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT4G25250.1	1.0e-20	32.83	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT5G62360.1	2.2e-18	34.81	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT5G62350.1	3.7e-18	30.77	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT1G62760.1	4.1e-17	31.98	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]

BLAST of CmoCh16G001940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077238\|ref\|XP_008439099.1\|	2.0e-74	75.62	PREDICTED: 21 kDa protein-like [Cucumis melo]	[more]
gi\|449460810\|ref\|XP_004148137.1\|	5.9e-74	74.37	PREDICTED: 21 kDa protein-like [Cucumis sativus]	[more]
gi\|645257369\|ref\|XP_008234383.1\|	1.1e-27	44.00	PREDICTED: 21 kDa protein-like [Prunus mume]	[more]
gi\|596006013\|ref\|XP_007218408.1\|	1.9e-27	43.43	hypothetical protein PRUPE_ppa011478mg [Prunus persica]	[more]
gi\|255539737\|ref\|XP_002510933.1\|	2.4e-27	41.29	PREDICTED: 21 kDa protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006501	Pectinesterase_inhib_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004857	enzyme inhibitor activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G001940.1	CmoCh16G001940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	GENE3D	G3DSA:1.20.140.40		coord: 41..200 score: 4.5
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 42..196 score: 1.0
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 37..196 score: 1.1
IPR006501	Pectinesterase inhibitor domain	TIGRFAMs	TIGR01614	TIGR01614	coord: 1..200 score: 9.7
IPR006501	Pectinesterase inhibitor domain	unknown	SSF101148	Plant invertase/pectin methylesterase inhibitor	coord: 40..200 score: 1.96
None	No IPR available	PANTHER	PTHR31080	FAMILY NOT NAMED	coord: 1..200 score: 2.3
None	No IPR available	PANTHER	PTHR31080:SF15	SUBFAMILY NOT NAMED	coord: 1..200 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G001940	CmaCh16G001850	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G001940	Cla006265	Watermelon (97103) v1	cmowmB310
CmoCh16G001940	Csa3G176250	Cucumber (Chinese Long) v2	cmocuB317
CmoCh16G001940	CSPI03G16020	Wild cucumber (PI 183967)	cmocpiB325
CmoCh16G001940	Cp4.1LG14g05620	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G001940	Cp4.1LG01g03680	Cucurbita pepo (Zucchini)	cmocpeB311
CmoCh16G001940	MELO3C006820.2	Melon (DHL92) v3.6.1	cmomedB331
CmoCh16G001940	CsaV3_3G016220	Cucumber (Chinese Long) v3	cmocucB0379
CmoCh16G001940	CsGy3G016100	Cucumber (Gy14) v2	cgybcmoB312
CmoCh16G001940	Carg08008	Silver-seed gourd	carcmoB0509
CmoCh16G001940	Carg16733	Silver-seed gourd	carcmoB1175

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G001940	Cucumber (Gy14) v1	cgycmoB0704
CmoCh16G001940	Cucurbita maxima (Rimu)	cmacmoB701
CmoCh16G001940	Melon (DHL92) v3.5.1	cmomeB289
CmoCh16G001940	Watermelon (Charleston Gray)	cmowcgB290
CmoCh16G001940	Cucurbita pepo (Zucchini)	cmocpeB322
CmoCh16G001940	Bottle gourd (USVL1VR-Ls)	cmolsiB300
CmoCh16G001940	Silver-seed gourd	carcmoB0966
CmoCh16G001940	Watermelon (97103) v2	cmowmbB331
CmoCh16G001940	Wax gourd	cmowgoB0436
CmoCh16G001940	Cucurbita moschata (Rifu)	cmocmoB239
CmoCh16G001940	Cucurbita moschata (Rifu)	cmocmoB286