CmoCh13G007890 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G007890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Stigma-specific Stig1 family protein, putative
Location	Cmo_Chr13 : 7525711 .. 7528017 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGTTTTGTAAGGCTTTTGTTCGTGGTGGCCTTGGCCTTGGCCTTGTTAGCGCCTCTTGCCATGGCTCATGCAGCCAAAGAAGATTTGAAGGTTGCATCACTGTGGGGGAGGGGCGGGTTCTTCTCTTATCGGTATAGGCCTTACCAAGCGGCGGTGACATGCGATAGGAGTATCAAGGTGTGCCGTGCCAAGGGCAGCCGTGGGCGCAATTGCTGCAAGAAAATGTGCGTGGATTTGAAGACGGATAGATACAATTGCGGCAAGTGTGGGAAGAAATGTAAGTACTCGGAGATATGTTGTAAAGGGAAGTGTGTGAATCCAATGTTTAATAGGAACAATTGTGGCGGCTGCAATAATAAGTGTAGTAGAGGAAGCTCGTGCGTTTATGGGATGTGCGGCTACGCGTAAATAACGATGGATTGTTTTGATTATTCGTTGTTGGTTACTTGAAAGTTGTTGATTCAGTTCATATTGATTAATGTCATATATCAATGAATTAATGGATTTGTTTTAAGTTGATGTTGTTTTGTTTATAATCTTGTTTTGATTAATGGATTCCTCTTTTTCTGAATCATATGATCAATGGGACTATGGAAGCTACATATCATTCTCATATGAAACAACTCGTTTGATATAACATATCAAGTCATGGGTATAACGTCGATCCAATCCAATCGATAAAGTTTGGGTTGAAGTATGAACTTATTTGAATTGGGATTGGTTTAAATAAATGAAATTTTTATAGATTGAATTCTTTAATGGTTCCTCTGAACTTAGTTAACTTTAAAAAAAAAAAATTGCTTACCACATGTCGTTTTCAATGAAGATCATCATGGTGGTCCTTCGAAAATGTAGTACTGTTGGATTTCGGGATGCTAGAATAAAAAAGACCTGATTGTGAGTCACTCTCAACCCGAGTCAAAAAAGCTACACAAAACCCTTTTGACAGGAAAAAAAAAGCACAAGGCCTACGACCGGTTAACGAATAGTGATGCATGTCGCTCCAATGCATATATACATATATTTATTTTATTTTCATTTAGTATCATAATTATTTTATTATTATTATTATTATGGTTCAACAACTCTTAAAAAAAAAAAAAAAAAAAAAAATCTATTTGGTGCATCCACTTGTAAATGATCCAAACACAAACTAACCTACTAAAAAATTTATGGCTGAGTTAATAAACGTTGTTTAAGTTCAACTTTTTGGTTATCTGTAAAAATGTTCTAATTCGACTTCCCTCCCACTTTTCTCTCTCACTTCACACTTTAACTCACCGTTCTTACAGAGAGACGCTTTCACATCTTCTTAACTCAAAATGGTAAATGGTTGGGGTGAGGAAAGATTTTTTTTTTTATAGTGTAACCGAGAACATATCCAGTGGAGATGGGGTGGGGCCTATAGCTCAGAGGATTAGAACATGTGGTTACGAACCCACAACCGGCCAAAAAGGAATGACTTTTTCCTCTGGGAATAGGAAAATCATGATGAGATAGCGAACCCAAAGCTATGCAACACAAACTAAGAAGCGTTTTATAATTGAGTGAAGTTGAAATTTTTTGCACTAAATTTGTGTCTTCTTGGCAATTCAGCAGCCTGAAAGATTCAAGGATCAAAAGGTGAAATTAGATGAAAGAAAGGTGGCTGATAGAAAGAGAGAATTAGATTAGAACATGAAATGCATGGGAAACCAACAAAGTTAGAGAAAATTCAAAGGTGAAAGAAAGAATAATAAATAAAGGCGTGTTAGGCACATGGAGGCCTCGTTTCCATTGCCTACCACCTTTTAATCCAATTCTTAATGGACGCTATTTTAGACTCATCCACTATCATTCCATATAAATACATACCCACATCTTCTCTACACCCTCATACCCAACAAAATGAGCTTCTTTGCAAAGCTACTATTTGCGGTGGCCTTGTGCGCATCTCTCTCCGCGTCTGCCGCAGCCAAGTTAGAGGACGACGAAGGGTTGGAAGCTTTAAGGCTACTTAGCTCGCTTCGGGCCAGGAGGGGCTTCTTCGCTTACATGTTTAGGCCTTACCAGGCGCCGAGGACATGCGATAGGAATGTAGAGGTGTGTCGGGGCAAAGGCAGCTGCTGCGGCAACAAGTGTGTGGATTTGAAGAGGGACAGAGTTAATTGTGGGAGGTGCGGGAAGAGATGCAAGTACTCCGAGATGTGCTGCAATGGAAGGTGTGTGAGGCCCTTGTTCGATAGGAACCATTGTGGAGGCTGCAATAATAAGTGTGGCAGAGGTAGCTTGTGCGTCTATGGGATGTGTGGCTATGCATGA

mRNA sequence

ATGAGGAGTTTTGTAAGGCTTTTGTTCGTGGTGGCCTTGGCCTTGGCCTTGTTAGCGCCTCTTGCCATGGCTCATGCAGCCAAAGAAGATTTGAAGGTTGCATCACTGTGGGGGAGGGGCGGGTTCTTCTCTTATCGGTATAGGCCTTACCAAGCGGCGGTGACATGCGATAGGAGTATCAAGGTGTGCCGTGCCAAGGGCAGCCGTGGGCGCAATTGCTGCAAGAAAATGTGCGTGGATTTGAAGACGGATAGATACAATTGCGGCAAGTGTGGGAAGAAATCCAAGTTAGAGGACGACGAAGGGTTGGAAGCTTTAAGGCTACTTAGCTCGCTTCGGGCCAGGAGGGGCTTCTTCGCTTACATGTTTAGGCCTTACCAGGCGCCGAGGACATGCGATAGGAATGTAGAGGTGTGTCGGGGCAAAGGCAGCTGCTGCGGCAACAAGTGTGTGGATTTGAAGAGGGACAGAGTTAATTGTGGGAGGTGCGGGAAGAGATGCAAGTACTCCGAGATGTGCTGCAATGGAAGGTGTGTGAGGCCCTTGTTCGATAGGAACCATTGTGGAGGCTGCAATAATAAGTGTGGCAGAGGTAGCTTGTGCGTCTATGGGATGTGTGGCTATGCATGA

Coding sequence (CDS)

ATGAGGAGTTTTGTAAGGCTTTTGTTCGTGGTGGCCTTGGCCTTGGCCTTGTTAGCGCCTCTTGCCATGGCTCATGCAGCCAAAGAAGATTTGAAGGTTGCATCACTGTGGGGGAGGGGCGGGTTCTTCTCTTATCGGTATAGGCCTTACCAAGCGGCGGTGACATGCGATAGGAGTATCAAGGTGTGCCGTGCCAAGGGCAGCCGTGGGCGCAATTGCTGCAAGAAAATGTGCGTGGATTTGAAGACGGATAGATACAATTGCGGCAAGTGTGGGAAGAAATCCAAGTTAGAGGACGACGAAGGGTTGGAAGCTTTAAGGCTACTTAGCTCGCTTCGGGCCAGGAGGGGCTTCTTCGCTTACATGTTTAGGCCTTACCAGGCGCCGAGGACATGCGATAGGAATGTAGAGGTGTGTCGGGGCAAAGGCAGCTGCTGCGGCAACAAGTGTGTGGATTTGAAGAGGGACAGAGTTAATTGTGGGAGGTGCGGGAAGAGATGCAAGTACTCCGAGATGTGCTGCAATGGAAGGTGTGTGAGGCCCTTGTTCGATAGGAACCATTGTGGAGGCTGCAATAATAAGTGTGGCAGAGGTAGCTTGTGCGTCTATGGGATGTGTGGCTATGCATGA

Homology

[Close]

BLAST of CmoCh13G007890 vs. Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.6e-20
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 1


Query: 132 CDRNVEVCRGKG--------SCCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLF 191
           C+RN E+C   G        +CC NKC+D+  D  NCG C  +CK+S+ CC G+CV   +
Sbjct: 67  CNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAY 126

Query: 192 DRNHCGGCNNKCGRGSLCVYGMCGYA 210
           D+ HCG CN+ C  G  CVYG+C YA
Sbjct: 127 DKRHCGQCNHPCELGEFCVYGLCNYA 152

[Close]

BLAST of CmoCh13G007890 vs. Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 1


Query: 124 RPYQAPRTCDRNVEVCRGKG------SCCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGR 183
           R   A   C++  E+C+ +G      +CC NKCVDL  D  NCG C  +CK+++ CC G 
Sbjct: 63  RNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGE 122

Query: 184 CVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           CV   +D+ HCG CN+ C  G  CVYG+C YA
Sbjct: 123 CVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

[Close]

BLAST of CmoCh13G007890 vs. Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1


Query: 132 CDRNVEVCRGKG---------SCCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPL 191
           C+++ E+C             +CC NKC+DL  D  NCG C  +CK+ + CC G+CV   
Sbjct: 77  CNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVA 136

Query: 192 FDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           +D+ HCG CN++C  G  CVYG+C YA
Sbjct: 137 YDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]

BLAST of CmoCh13G007890 vs. Swiss-Prot
Match: GRI_ARATH (Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 1


Query: 145 CCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYG 204
           CC   C ++  DR NCGRCG +C + + CC G C    F+ NHCG C  KC  G  C YG
Sbjct: 104 CCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYG 163

Query: 205 MCGYA 210
            CGYA
Sbjct: 164 YCGYA 168

[Close]

BLAST of CmoCh13G007890 vs. Swiss-Prot
Match: STGL4_ARATH (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana GN=At1g50650 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 1


Query: 145 CCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYG 204
           CC N+CVD+  D  +C  C K C+++  CC+G CV    D ++CG C N+C  G+ C +G
Sbjct: 74  CCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFG 133

Query: 205 MCGYA 210
           MCGYA
Sbjct: 134 MCGYA 138

[Close]

BLAST of CmoCh13G007890 vs. TrEMBL
Match: A0A0A0LUQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059710 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.6e-43
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 98  EDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS----CCGNKCVDL 157
           ++ E +E +  L+SLR RRGFF+Y FRP+QA  TCDRN++VCR +GS    CC  KCVDL
Sbjct: 24  QEHEKMEDVVTLTSLRGRRGFFSYKFRPFQAAMTCDRNIKVCRAEGSPGRNCCQKKCVDL 83

Query: 158 KRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           KRDR NCGRCGK+CKYSE+CC G+CV  +F+R HCGGCNNKC RGSLCVYGMCGYA
Sbjct: 84  KRDRYNCGRCGKKCKYSEVCCKGKCVNTMFNRKHCGGCNNKCNRGSLCVYGMCGYA 139

[Close]

BLAST of CmoCh13G007890 vs. TrEMBL
Match: A0A118K5P0_CYNCS (Stigma-specific protein Stig1 OS=Cynara cardunculus var. scolymus GN=Ccrd_012239 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-36
Identity = 77/185 (41.62%), Postives = 109/185 (58.92%), Query Frame = 1


Query: 54  VTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKSK----------------- 113
           V C+++ ++CRAKGS G +CCKK CV++ TD+ NCG CGKK +                 
Sbjct: 249 VKCNKNPRLCRAKGSPGPDCCKKTCVNVMTDKQNCGMCGKKCRRQEICCKGKCVNPTMDK 308

Query: 114 --------LEDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS---- 173
                   +EDD+  +    +S+  + RG   ++ +       CD+N  +CR K S    
Sbjct: 309 PINLSATPIEDDDEDD----VSAFGSLRGASRFLAQHSTGLVKCDKNPRLCRAKTSPGPD 368

Query: 174 CCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYG 210
           CC  KCV++K D+ NCG CGK+CK+ E+CCNG+CV  + D+ HCGGCNN+C RG+ C YG
Sbjct: 369 CCKKKCVNVKTDKQNCGLCGKKCKHQEICCNGKCVNTMMDKRHCGGCNNRCKRGNSCRYG 428

[Close]

BLAST of CmoCh13G007890 vs. TrEMBL
Match: A0A0D2ULK3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G180700 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 1


Query: 98  EDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS-CCGNKCVDLKRD 157
           + D  L   ++ +S R   GF    FRP+    TCD+  E+C  KG  CC  +CVDLK +
Sbjct: 28  KSDHPLGNSQMAASFRGAGGFPTQGFRPFL---TCDKQPEICSMKGLFCCNRRCVDLKTE 87

Query: 158 RVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           + NCGRCGK C YS +CC G+CV PLFD NHCGGCNN CG+GS CVYGMC YA
Sbjct: 88  QFNCGRCGKTCNYSSICCEGKCVSPLFDENHCGGCNNSCGKGSSCVYGMCNYA 137

[Close]

BLAST of CmoCh13G007890 vs. TrEMBL
Match: A0A061GFX6_THECC (Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030272 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-28
Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 1


Query: 107 RLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS----CCGNKCVDLKRDRVNCGR 166
           R+ +S+R    F A      +A  TCD+N +VCR KGS    CC  KCVDLK DR NCG+
Sbjct: 48  RVPTSIRGAGRFLAQSSS--RAALTCDKNPKVCRTKGSQGPSCCSKKCVDLKTDRFNCGK 107

Query: 167 CGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           CGK+CKYS++CC G+CV PL +  HCGGCNN CG G+ C+YGMC YA
Sbjct: 108 CGKKCKYSKICCQGKCVNPLSNSKHCGGCNNSCGNGNACLYGMCSYA 152

[Close]

BLAST of CmoCh13G007890 vs. TrEMBL
Match: A0A0A0LWX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058155 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-28
Identity = 62/123 (50.41%), Postives = 81/123 (65.85%), Query Frame = 1


Query: 95  SKLEDDEGLEALRLLSSLRARRGFFAYMFRPYQAPR----TCDRNVEVCRGKGS----CC 154
           + L DDE    L  +    +  G    +  P+Q+ +    TC++   VCR KGS    CC
Sbjct: 35  TNLSDDEVSNHLASIEDEDSPLGLARRLLFPFQSLQKGLLTCNKYPRVCRRKGSAGPDCC 94

Query: 155 GNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMC 210
             KCV+++RDR NCGRCGK+CKYS++CC G+CV PLF+R HCGGCN +C +GS CVYGMC
Sbjct: 95  KKKCVNVERDRNNCGRCGKKCKYSKICCKGKCVNPLFNRKHCGGCNIECSKGSFCVYGMC 154

[Close]

BLAST of CmoCh13G007890 vs. TAIR10
Match: AT1G11925.1 (AT1G11925.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 128 APRTCDRNVEVCRGKGS----CCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLF 187
           A  TCD++ +VCR KGS    CC  KCVDL+ +++NCGRCGK C+YSE+CCNG CV P+F
Sbjct: 55  ATLTCDKSSKVCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMF 114

Query: 188 DRNHCGGCNNKCGRGSLCVYGMCGYA 210
           DR HCGGC  KC +G  C YGMC YA
Sbjct: 115 DRRHCGGCFKKCKKGRSCAYGMCSYA 140

[Close]

BLAST of CmoCh13G007890 vs. TAIR10
Match: AT4G26880.1 (AT4G26880.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 1


Query: 132 CDRNVEVCRGKG--------SCCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLF 191
           C+RN E+C   G        +CC NKC+D+  D  NCG C  +CK+S+ CC G+CV   +
Sbjct: 67  CNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAY 126

Query: 192 DRNHCGGCNNKCGRGSLCVYGMCGYA 210
           D+ HCG CN+ C  G  CVYG+C YA
Sbjct: 127 DKRHCGQCNHPCELGEFCVYGLCNYA 152

[Close]

BLAST of CmoCh13G007890 vs. TAIR10
Match: AT1G50720.1 (AT1G50720.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 98.2 bits (243), Expect = 6.3e-21
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 1


Query: 124 RPYQAPRTCDRNVEVCRGKG------SCCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGR 183
           R   A   C++  E+C+ +G      +CC NKCVDL  D  NCG C  +CK+++ CC G 
Sbjct: 63  RNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGE 122

Query: 184 CVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           CV   +D+ HCG CN+ C  G  CVYG+C YA
Sbjct: 123 CVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

[Close]

BLAST of CmoCh13G007890 vs. TAIR10
Match: AT5G55110.1 (AT5G55110.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1


Query: 132 CDRNVEVCRGKG---------SCCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPL 191
           C+++ E+C             +CC NKC+DL  D  NCG C  +CK+ + CC G+CV   
Sbjct: 77  CNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVA 136

Query: 192 FDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           +D+ HCG CN++C  G  CVYG+C YA
Sbjct: 137 YDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]

BLAST of CmoCh13G007890 vs. TAIR10
Match: AT1G53130.1 (AT1G53130.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-15
Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 1


Query: 145 CCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYG 204
           CC   C ++  DR NCGRCG +C + + CC G C    F+ NHCG C  KC  G  C YG
Sbjct: 104 CCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYG 163

Query: 205 MCGYA 210
            CGYA
Sbjct: 164 YCGYA 168

[Close]

BLAST of CmoCh13G007890 vs. NCBI nr
Match: gi|778658347|ref|XP_011652551.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 9.4e-43
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 98  EDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS----CCGNKCVDL 157
           ++ E +E +  L+SLR RRGFF+Y FRP+QA  TCDRN++VCR +GS    CC  KCVDL
Sbjct: 24  QEHEKMEDVVTLTSLRGRRGFFSYKFRPFQAAMTCDRNIKVCRAEGSPGRNCCQKKCVDL 83

Query: 158 KRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           KRDR NCGRCGK+CKYSE+CC G+CV  +F+R HCGGCNNKC RGSLCVYGMCGYA
Sbjct: 84  KRDRYNCGRCGKKCKYSEVCCKGKCVNTMFNRKHCGGCNNKCNRGSLCVYGMCGYA 139

[Close]

BLAST of CmoCh13G007890 vs. NCBI nr
Match: gi|659067693|ref|XP_008440806.1| (PREDICTED: uncharacterized protein LOC103485113 [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 6.1e-42
Identity = 76/116 (65.52%), Postives = 95/116 (81.90%), Query Frame = 1


Query: 98  EDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS----CCGNKCVDL 157
           ++ + +E + +L+SLR RRGFF+Y F+P+QA  TCDRN++VCR +GS    CC  KCVDL
Sbjct: 24  KEHDKMEDVVMLTSLRGRRGFFSYKFKPFQAAMTCDRNIKVCRAEGSPGRNCCQKKCVDL 83

Query: 158 KRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           KRDR NCGRCG++CKYSE+CC G+CV  +F+R HCGGCNNKC RGSLCVYGMCGYA
Sbjct: 84  KRDRYNCGRCGRKCKYSEVCCKGKCVNTMFNRKHCGGCNNKCNRGSLCVYGMCGYA 139

[Close]

BLAST of CmoCh13G007890 vs. NCBI nr
Match: gi|694351238|ref|XP_009357476.1| (PREDICTED: uncharacterized protein LOC103948204 [Pyrus x bretschneideri])

HSP 1 Score: 173.3 bits (438), Expect = 4.4e-40
Identity = 87/178 (48.88%), Postives = 103/178 (57.87%), Query Frame = 1


Query: 55  TCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKSKLED--------------- 114
           TCD   ++CRAK S G +CCKK CVD+KTDRYNCG CG + K  +               
Sbjct: 78  TCDNFPRICRAKNSLGPDCCKKKCVDVKTDRYNCGICGYRCKYTEICCRGQEESFFEEEN 137

Query: 115 ----DEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS----CCGNKCV 174
               DE    L   +SLR    F A       A  TCD+   VCR  GS    CC  KCV
Sbjct: 138 NDPNDETKSQLEKSTSLRGTSRFLASR----AAVMTCDKKPSVCRVSGSGGPDCCKKKCV 197

Query: 175 DLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           +   DRVNCG+CGK+CKY+E+CC G+CV P  DR +CGGCNNKC +GS C YGMC YA
Sbjct: 198 NTNTDRVNCGKCGKKCKYAEICCKGKCVNPRSDRKNCGGCNNKCKKGSSCAYGMCSYA 251

[Close]

BLAST of CmoCh13G007890 vs. NCBI nr
Match: gi|976925471|gb|KVI09375.1| (Stigma-specific protein Stig1 [Cynara cardunculus var. scolymus])

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-36
Identity = 77/185 (41.62%), Postives = 109/185 (58.92%), Query Frame = 1


Query: 54  VTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKSK----------------- 113
           V C+++ ++CRAKGS G +CCKK CV++ TD+ NCG CGKK +                 
Sbjct: 249 VKCNKNPRLCRAKGSPGPDCCKKTCVNVMTDKQNCGMCGKKCRRQEICCKGKCVNPTMDK 308

Query: 114 --------LEDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS---- 173
                   +EDD+  +    +S+  + RG   ++ +       CD+N  +CR K S    
Sbjct: 309 PINLSATPIEDDDEDD----VSAFGSLRGASRFLAQHSTGLVKCDKNPRLCRAKTSPGPD 368

Query: 174 CCGNKCVDLKRDRVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYG 210
           CC  KCV++K D+ NCG CGK+CK+ E+CCNG+CV  + D+ HCGGCNN+C RG+ C YG
Sbjct: 369 CCKKKCVNVKTDKQNCGLCGKKCKHQEICCNGKCVNTMMDKRHCGGCNNRCKRGNSCRYG 428

[Close]

BLAST of CmoCh13G007890 vs. NCBI nr
Match: gi|763789849|gb|KJB56845.1| (hypothetical protein B456_009G180700 [Gossypium raimondii])

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-29
Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 1


Query: 98  EDDEGLEALRLLSSLRARRGFFAYMFRPYQAPRTCDRNVEVCRGKGS-CCGNKCVDLKRD 157
           + D  L   ++ +S R   GF    FRP+    TCD+  E+C  KG  CC  +CVDLK +
Sbjct: 28  KSDHPLGNSQMAASFRGAGGFPTQGFRPFL---TCDKQPEICSMKGLFCCNRRCVDLKTE 87

Query: 158 RVNCGRCGKRCKYSEMCCNGRCVRPLFDRNHCGGCNNKCGRGSLCVYGMCGYA 210
           + NCGRCGK C YS +CC G+CV PLFD NHCGGCNN CG+GS CVYGMC YA
Sbjct: 88  QFNCGRCGKTCNYSSICCEGKCVSPLFDENHCGGCNNSCGKGSSCVYGMCNYA 137

The following BLAST results are available for this feature:

BLAST of CmoCh13G007890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STGL1_ARATH	8.6e-20	46.51	Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 S...	[more]
STGL3_ARATH	1.1e-19	44.57	Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 S...	[more]
STGL2_ARATH	2.1e-18	42.53	Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 S...	[more]
GRI_ARATH	1.2e-13	49.23	Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1	[more]
STGL4_ARATH	1.1e-11	46.15	Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana GN=At1g50650 PE=3 S...	[more]

BLAST of CmoCh13G007890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUQ5_CUCSA	6.6e-43	68.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059710 PE=4 SV=1	[more]
A0A118K5P0_CYNCS	2.7e-36	41.62	Stigma-specific protein Stig1 OS=Cynara cardunculus var. scolymus GN=Ccrd_012239...	[more]
A0A0D2ULK3_GOSRA	1.1e-29	54.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G180700 PE=4 SV=1	[more]
A0A061GFX6_THECC	4.6e-28	56.07	Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030272 ...	[more]
A0A0A0LWX5_CUCSA	4.6e-28	50.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058155 PE=4 SV=1	[more]

BLAST of CmoCh13G007890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11925.1	6.3e-29	61.63	Stigma-specific Stig1 family protein	[more]
AT4G26880.1	4.8e-21	46.51	Stigma-specific Stig1 family protein	[more]
AT1G50720.1	6.3e-21	44.57	Stigma-specific Stig1 family protein	[more]
AT5G55110.1	1.2e-19	42.53	Stigma-specific Stig1 family protein	[more]
AT1G53130.1	6.8e-15	49.23	Stigma-specific Stig1 family protein	[more]

BLAST of CmoCh13G007890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658347\|ref\|XP_011652551.1\|	9.4e-43	68.10	PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]	[more]
gi\|659067693\|ref\|XP_008440806.1\|	6.1e-42	65.52	PREDICTED: uncharacterized protein LOC103485113 [Cucumis melo]	[more]
gi\|694351238\|ref\|XP_009357476.1\|	4.4e-40	48.88	PREDICTED: uncharacterized protein LOC103948204 [Pyrus x bretschneideri]	[more]
gi\|976925471\|gb\|KVI09375.1\|	3.8e-36	41.62	Stigma-specific protein Stig1 [Cynara cardunculus var. scolymus]	[more]
gi\|763789849\|gb\|KJB56845.1\|	1.6e-29	54.87	hypothetical protein B456_009G180700 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006969	Stig1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G007890.1	CmoCh13G007890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006969	Stigma-specific protein Stig1	PANTHER	PTHR33227	FAMILY NOT NAMED	coord: 97..209 score: 4.9
IPR006969	Stigma-specific protein Stig1	PFAM	PF04885	Stig1	coord: 32..98 score: 3.7E-13coord: 112..209 score: 2.7
None	No IPR available	PRODOM	PD936484		coord: 132..185 score: 0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G007890	Cucsa.085560	Cucumber (Gy14) v1	cgycmoB0157
CmoCh13G007890	CmaCh18G002750	Cucurbita maxima (Rimu)	cmacmoB393
CmoCh13G007890	CmaCh13G007580	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G007890	Cla019356	Watermelon (97103) v1	cmowmB176
CmoCh13G007890	Csa1G058150	Cucumber (Chinese Long) v2	cmocuB203
CmoCh13G007890	MELO3C002433	Melon (DHL92) v3.5.1	cmomeB179
CmoCh13G007890	ClCG03G004450	Watermelon (Charleston Gray)	cmowcgB187
CmoCh13G007890	CSPI01G10250	Wild cucumber (PI 183967)	cmocpiB205
CmoCh13G007890	Lsi02G005640	Bottle gourd (USVL1VR-Ls)	cmolsiB200
CmoCh13G007890	Lsi02G005710	Bottle gourd (USVL1VR-Ls)	cmolsiB197
CmoCh13G007890	Cp4.1LG09g09220	Cucurbita pepo (Zucchini)	cmocpeB182
CmoCh13G007890	Cp4.1LG20g03410	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G007890	MELO3C002423.2	Melon (DHL92) v3.6.1	cmomedB201
CmoCh13G007890	CsaV3_1G010310	Cucumber (Chinese Long) v3	cmocucB0235
CmoCh13G007890	Cla97C03G055610	Watermelon (97103) v2	cmowmbB212
CmoCh13G007890	Bhi08G001480	Wax gourd	cmowgoB0262
CmoCh13G007890	CsGy1G010270	Cucumber (Gy14) v2	cgybcmoB068
CmoCh13G007890	Carg07559	Silver-seed gourd	carcmoB1349
CmoCh13G007890	Carg06837	Silver-seed gourd	carcmoB0672

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G007890	CmoCh18G002560	Cucurbita moschata (Rifu)	cmocmoB170

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G007890	Cucurbita moschata (Rifu)	cmocmoB166
CmoCh13G007890	Cucurbita maxima (Rimu)	cmacmoB394
CmoCh13G007890	Cucurbita pepo (Zucchini)	cmocpeB184
CmoCh13G007890	Silver-seed gourd	carcmoB0670