Cp4.1LG20g03410 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g03410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionStigma-specific Stig1 family protein
LocationCp4.1LG20 : 1961737 .. 1962150 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGTTTTGTAAGGCTTTTGTTCGTGGTGGCCTTGGCCTTGGCCTTGTTAGCGCCTGTTGCCATGGCTCGTGCAGCCAAAGAAGAATTGAAGGTTGCATCGGTGTGGGGGAGGGGCGGGTTCTTCTCTTATCGGTATAGGCCTTACCAAGCGGCGGTGACATGCGATAGGAGTATCAAGGTGTGCCGTGCCAAGGGCAGCCGTGGGCGCAATTGCTGCAAGAAAATGTGCGTGGATTTGAAGACGGATAGGTACAATTGCGGGAAGTGTGGGAAGAAATGTAAGTACTCGGAGATATGTTGTAAAGGGAAGTGTGTGAATCCAATGTTTAATAGGAACAATTGTGGCGGCTGCAATAATAAGTGTAGTAGAGGAAGCTCGTGCGTTTATGGGATGTGCGGCTACGCGTAA

mRNA sequence

ATGAGGAGTTTTGTAAGGCTTTTGTTCGTGGTGGCCTTGGCCTTGGCCTTGTTAGCGCCTGTTGCCATGGCTCGTGCAGCCAAAGAAGAATTGAAGGTTGCATCGGTGTGGGGGAGGGGCGGGTTCTTCTCTTATCGGTATAGGCCTTACCAAGCGGCGGTGACATGCGATAGGAGTATCAAGGTGTGCCGTGCCAAGGGCAGCCGTGGGCGCAATTGCTGCAAGAAAATGTGCGTGGATTTGAAGACGGATAGGTACAATTGCGGGAAGTGTGGGAAGAAATGTAAGTACTCGGAGATATGTTGTAAAGGGAAGTGTGTGAATCCAATGTTTAATAGGAACAATTGTGGCGGCTGCAATAATAAGTGTAGTAGAGGAAGCTCGTGCGTTTATGGGATGTGCGGCTACGCGTAA

Coding sequence (CDS)

ATGAGGAGTTTTGTAAGGCTTTTGTTCGTGGTGGCCTTGGCCTTGGCCTTGTTAGCGCCTGTTGCCATGGCTCGTGCAGCCAAAGAAGAATTGAAGGTTGCATCGGTGTGGGGGAGGGGCGGGTTCTTCTCTTATCGGTATAGGCCTTACCAAGCGGCGGTGACATGCGATAGGAGTATCAAGGTGTGCCGTGCCAAGGGCAGCCGTGGGCGCAATTGCTGCAAGAAAATGTGCGTGGATTTGAAGACGGATAGGTACAATTGCGGGAAGTGTGGGAAGAAATGTAAGTACTCGGAGATATGTTGTAAAGGGAAGTGTGTGAATCCAATGTTTAATAGGAACAATTGTGGCGGCTGCAATAATAAGTGTAGTAGAGGAAGCTCGTGCGTTTATGGGATGTGCGGCTACGCGTAA

Protein sequence

MRSFVRLLFVVALALALLAPVAMARAAKEELKVASVWGRGGFFSYRYRPYQAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA
Homology
[Close]
BLAST of Cp4.1LG20g03410 vs. Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.0e-18
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 1 

Query: 52  AAVTCDRSIKVCRAKGSRGRN----CCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCV 111
           AA  C+R+ ++C   G  G N    CC   C+D+ +D  NCG C  KCK+S+ CC+G+CV
Sbjct: 63  AADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCV 122

Query: 112 NPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
              +++ +CG CN+ C  G  CVYG+C YA
Sbjct: 123 YVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152

[Close]
BLAST of Cp4.1LG20g03410 vs. Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.6e-17
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 52  AAVTCDRSIKVCRAKG-SRGRN----CCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKC 111
           AA  C++  ++C +   S G N    CC   C+DL TD  NCG C  KCK+ + CC+G+C
Sbjct: 73  AADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQC 132

Query: 112 VNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           V   +++ +CG CN++C  G  CVYG+C YA
Sbjct: 133 VYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]
BLAST of Cp4.1LG20g03410 vs. Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1 

Query: 48  RPYQAAVTCDRSIKVCRAKGSRGRN--CCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGK 107
           R   AA  C++  ++C+++G       CC   CVDL  D  NCG C  +CK+++ CC+G+
Sbjct: 63  RNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGE 122

Query: 108 CVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           CV   +++ +CG CN+ C  G  CVYG+C YA
Sbjct: 123 CVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

[Close]
BLAST of Cp4.1LG20g03410 vs. Swiss-Prot
Match: GRI_ARATH (Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 

Query: 47  YRPYQAAVTCD-RSIKVCRA----KGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEIC 106
           Y+  +  + C   S  +C      KG+   +CCKK C ++  DR NCG+CG KC + + C
Sbjct: 73  YKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRC 132

Query: 107 CKGKCVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           C G C    FN N+CG C  KC+ G  C YG CGYA
Sbjct: 133 CGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168

[Close]
BLAST of Cp4.1LG20g03410 vs. Swiss-Prot
Match: STIG1_TOBAC (Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 33/77 (42.86%), Postives = 41/77 (53.25%), Query Frame = 1 

Query: 61  KVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGGCN 120
           K C+    R   C    CVD+ T+R+NCG CG  C     CC G CV+   +  NCG C+
Sbjct: 70  KTCKRLSERNTCCFNYSCVDVSTNRFNCGSCGLVCNLGTRCCGGICVDIQKDNGNCGKCS 129

Query: 121 NKCSRGSSCVYGMCGYA 138
           N CS G  C +G C YA
Sbjct: 130 NVCSPGQKCSFGFCDYA 146

[Close]
BLAST of Cp4.1LG20g03410 vs. TrEMBL
Match: A0A0A0LUQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059710 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-48
Identity = 96/139 (69.06%), Postives = 113/139 (81.29%), Query Frame = 1 

Query: 1   MRSFVRLLFVVALALALLAPVAMARAAKEE--LKVASVWGRGGFFSYRYRPYQAAVTCDR 60
           M  FV+L FVV L  +LL+  A     K E  + + S+ GR GFFSY++RP+QAA+TCDR
Sbjct: 1   MMCFVKLFFVVVLFTSLLSSHAAQEHEKMEDVVTLTSLRGRRGFFSYKFRPFQAAMTCDR 60

Query: 61  SIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGG 120
           +IKVCRA+GS GRNCC+K CVDLK DRYNCG+CGKKCKYSE+CCKGKCVN MFNR +CGG
Sbjct: 61  NIKVCRAEGSPGRNCCQKKCVDLKRDRYNCGRCGKKCKYSEVCCKGKCVNTMFNRKHCGG 120

Query: 121 CNNKCSRGSSCVYGMCGYA 138
           CNNKC+RGS CVYGMCGYA
Sbjct: 121 CNNKCNRGSLCVYGMCGYA 139

[Close]
BLAST of Cp4.1LG20g03410 vs. TrEMBL
Match: B9HZ88_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01370g PE=4 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 60/87 (68.97%), Postives = 76/87 (87.36%), Query Frame = 1 

Query: 51  QAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPM 110
           +A +TCD++ +VCR +GS G +CCKKMCV+  TD +NCGKCGKKC+Y+EICCKGKCVNPM
Sbjct: 67  RAFMTCDKNPRVCRVQGSPGPDCCKKMCVNQMTDWFNCGKCGKKCRYTEICCKGKCVNPM 126

Query: 111 FNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           +N+N+CGGCNNKC +GS+C YGMC YA
Sbjct: 127 YNKNHCGGCNNKCKKGSACQYGMCSYA 153

[Close]
BLAST of Cp4.1LG20g03410 vs. TrEMBL
Match: U5G0D4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01320g PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 60/87 (68.97%), Postives = 76/87 (87.36%), Query Frame = 1 

Query: 51  QAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPM 110
           +A +TCD++ +VCR +GS G +CCKKMCV+  TD +NCGKCGKKC+Y+EICCKGKCVNPM
Sbjct: 67  RAFMTCDKNPRVCRVQGSPGPDCCKKMCVNQMTDWFNCGKCGKKCRYTEICCKGKCVNPM 126

Query: 111 FNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           +N+N+CGGCNNKC +GS+C YGMC YA
Sbjct: 127 YNKNHCGGCNNKCKKGSACQYGMCSYA 153

[Close]
BLAST of Cp4.1LG20g03410 vs. TrEMBL
Match: M5X0S4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013138mg PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-32
Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 1 

Query: 32  KVASVWGRGGFFSYRYRPYQAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKC 91
           K  S+ GR  F + R      A+TCDR  KVCRA GS G +CCKK CVD  TDR NCGKC
Sbjct: 37  KSTSLRGRSRFLASR----PPAMTCDRYPKVCRASGSAGPDCCKKKCVDRNTDRANCGKC 96

Query: 92  GKKCKYSEICCKGKCVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           G+KCKY+EICCKGKCVNP  ++ NCG CNNKC +GSSC YGMC YA
Sbjct: 97  GRKCKYAEICCKGKCVNPRSDKKNCGSCNNKCKKGSSCAYGMCSYA 138

[Close]
BLAST of Cp4.1LG20g03410 vs. TrEMBL
Match: W9R9E7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014177 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-32
Identity = 64/90 (71.11%), Postives = 72/90 (80.00%), Query Frame = 1 

Query: 48  RPYQAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCV 107
           R   AA+TCD+  KVCRAKGS G +CCKK CVD   DR NCGKCGKKCK+SEICCKGKCV
Sbjct: 67  RRLAAAMTCDKYPKVCRAKGSAGPDCCKKKCVDTSYDRLNCGKCGKKCKFSEICCKGKCV 126

Query: 108 NPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           NP  ++ NCGGCNNKC +GSSC +GMC YA
Sbjct: 127 NPRSDKRNCGGCNNKCKKGSSCSFGMCSYA 156

[Close]
BLAST of Cp4.1LG20g03410 vs. TAIR10
Match: AT1G11925.1 (AT1G11925.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 141.4 bits (355), Expect = 4.3e-34
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 1 

Query: 3   SFVRLLFVVALALALLAPVAMARAAKEELKVASVWGRGGFFSYRYRPYQAA-VTCDRSIK 62
           S+  ++ ++ LA+A+     +   AK + K    WG       + R +  A +TCD+S K
Sbjct: 7   SYFIMVLIMVLAIAITFSEPLTVEAKHQHKYG--WGIAASARNKGRKHLGATLTCDKSSK 66

Query: 63  VCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGGCNN 122
           VCR KGS GRNCC+K CVDL+T++ NCG+CGK C+YSE+CC G CVNPMF+R +CGGC  
Sbjct: 67  VCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRHCGGCFK 126

Query: 123 KCSRGSSCVYGMCGYA 138
           KC +G SC YGMC YA
Sbjct: 127 KCKKGRSCAYGMCSYA 140

[Close]
BLAST of Cp4.1LG20g03410 vs. TAIR10
Match: AT4G26880.1 (AT4G26880.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 1 

Query: 52  AAVTCDRSIKVCRAKGSRGRN----CCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCV 111
           AA  C+R+ ++C   G  G N    CC   C+D+ +D  NCG C  KCK+S+ CC+G+CV
Sbjct: 63  AADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCV 122

Query: 112 NPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
              +++ +CG CN+ C  G  CVYG+C YA
Sbjct: 123 YVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152

[Close]
BLAST of Cp4.1LG20g03410 vs. TAIR10
Match: AT5G55110.1 (AT5G55110.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 88.2 bits (217), Expect = 4.3e-18
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 52  AAVTCDRSIKVCRAKG-SRGRN----CCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKC 111
           AA  C++  ++C +   S G N    CC   C+DL TD  NCG C  KCK+ + CC+G+C
Sbjct: 73  AADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQC 132

Query: 112 VNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           V   +++ +CG CN++C  G  CVYG+C YA
Sbjct: 133 VYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]
BLAST of Cp4.1LG20g03410 vs. TAIR10
Match: AT1G50720.1 (AT1G50720.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 87.4 bits (215), Expect = 7.3e-18
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1 

Query: 48  RPYQAAVTCDRSIKVCRAKGSRGRN--CCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGK 107
           R   AA  C++  ++C+++G       CC   CVDL  D  NCG C  +CK+++ CC+G+
Sbjct: 63  RNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGE 122

Query: 108 CVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           CV   +++ +CG CN+ C  G  CVYG+C YA
Sbjct: 123 CVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

[Close]
BLAST of Cp4.1LG20g03410 vs. TAIR10
Match: AT1G53130.1 (AT1G53130.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 84.0 bits (206), Expect = 8.1e-17
Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 

Query: 47  YRPYQAAVTCD-RSIKVCRA----KGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEIC 106
           Y+  +  + C   S  +C      KG+   +CCKK C ++  DR NCG+CG KC + + C
Sbjct: 73  YKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRC 132

Query: 107 CKGKCVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           C G C    FN N+CG C  KC+ G  C YG CGYA
Sbjct: 133 CGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168

[Close]
BLAST of Cp4.1LG20g03410 vs. NCBI nr
Match: gi|778658347|ref|XP_011652551.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-48
Identity = 96/139 (69.06%), Postives = 113/139 (81.29%), Query Frame = 1 

Query: 1   MRSFVRLLFVVALALALLAPVAMARAAKEE--LKVASVWGRGGFFSYRYRPYQAAVTCDR 60
           M  FV+L FVV L  +LL+  A     K E  + + S+ GR GFFSY++RP+QAA+TCDR
Sbjct: 1   MMCFVKLFFVVVLFTSLLSSHAAQEHEKMEDVVTLTSLRGRRGFFSYKFRPFQAAMTCDR 60

Query: 61  SIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGG 120
           +IKVCRA+GS GRNCC+K CVDLK DRYNCG+CGKKCKYSE+CCKGKCVN MFNR +CGG
Sbjct: 61  NIKVCRAEGSPGRNCCQKKCVDLKRDRYNCGRCGKKCKYSEVCCKGKCVNTMFNRKHCGG 120

Query: 121 CNNKCSRGSSCVYGMCGYA 138
           CNNKC+RGS CVYGMCGYA
Sbjct: 121 CNNKCNRGSLCVYGMCGYA 139

[Close]
BLAST of Cp4.1LG20g03410 vs. NCBI nr
Match: gi|659067693|ref|XP_008440806.1| (PREDICTED: uncharacterized protein LOC103485113 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47
Identity = 93/139 (66.91%), Postives = 112/139 (80.58%), Query Frame = 1 

Query: 1   MRSFVRLLFVVALALALLAPVAMARAAKEE--LKVASVWGRGGFFSYRYRPYQAAVTCDR 60
           M  FV+L FVV L  +L +  A     K E  + + S+ GR GFFSY+++P+QAA+TCDR
Sbjct: 1   MMCFVKLFFVVVLFTSLFSSHASKEHDKMEDVVMLTSLRGRRGFFSYKFKPFQAAMTCDR 60

Query: 61  SIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGG 120
           +IKVCRA+GS GRNCC+K CVDLK DRYNCG+CG+KCKYSE+CCKGKCVN MFNR +CGG
Sbjct: 61  NIKVCRAEGSPGRNCCQKKCVDLKRDRYNCGRCGRKCKYSEVCCKGKCVNTMFNRKHCGG 120

Query: 121 CNNKCSRGSSCVYGMCGYA 138
           CNNKC+RGS CVYGMCGYA
Sbjct: 121 CNNKCNRGSLCVYGMCGYA 139

[Close]
BLAST of Cp4.1LG20g03410 vs. NCBI nr
Match: gi|764549967|ref|XP_011460009.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-34
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = 1 

Query: 53  AVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCKGKCVNPMFN 112
           A TCD++ KVC+A GS GR+CCKK CVDL+TDR NCGKCGKKCKYSEICCKGKC+NPM +
Sbjct: 75  ATTCDKNPKVCKAAGSAGRDCCKKKCVDLRTDRVNCGKCGKKCKYSEICCKGKCLNPMSD 134

Query: 113 RNNCGGCNNKCSRGSSCVYGMCGYA 138
           + NCG CNNKC +GSSCVYGMC YA
Sbjct: 135 KKNCGSCNNKCKKGSSCVYGMCSYA 159

[Close]
BLAST of Cp4.1LG20g03410 vs. NCBI nr
Match: gi|657959059|ref|XP_008371072.1| (PREDICTED: uncharacterized protein LOC103434485 [Malus domestica])

HSP 1 Score: 148.3 bits (373), Expect = 9.9e-33
Identity = 69/114 (60.53%), Postives = 79/114 (69.30%), Query Frame = 1 

Query: 24  ARAAKEELKVASVWGRGGFFSYRYRPYQAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKT 83
           A  + +  K  S+ GR  F + R     A  TCD+  +VCRA GS GR+CCKK CVD  T
Sbjct: 41  ATKSMQSEKTTSLIGRSRFLASR----AAVPTCDKYPRVCRATGSAGRDCCKKKCVDTNT 100

Query: 84  DRYNCGKCGKKCKYSEICCKGKCVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           DR NCGKCGKKCKY E CCKGKCVNP  ++ NCG CNNKC +GSSCVYGMC YA
Sbjct: 101 DRVNCGKCGKKCKYGETCCKGKCVNPRSDKKNCGSCNNKCKKGSSCVYGMCSYA 150

[Close]
BLAST of Cp4.1LG20g03410 vs. NCBI nr
Match: gi|764526088|ref|XP_011457947.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 77/154 (50.00%), Postives = 98/154 (63.64%), Query Frame = 1 

Query: 1   MRSFVRLLFVVALALALLAPVAMARAAKEELKV-----------------ASVWGRGGFF 60
           M+  +++LF++A+ +AL A    A A +E+ +                   S+ G   F 
Sbjct: 1   MKGSIQVLFLLAMLMALAAITLSASAPEEDREEWFSDEDNDLPATLSQMKTSLRGASRFL 60

Query: 61  SYRYRPYQAAVTCDRSIKVCRAKGSRGRNCCKKMCVDLKTDRYNCGKCGKKCKYSEICCK 120
           + R        TCD++ KVC+A GS GR+CCKK CVDLKTDR NCGKCGKKCKYSEICCK
Sbjct: 61  ATR----ATTTTCDKNPKVCKAAGSVGRDCCKKKCVDLKTDRVNCGKCGKKCKYSEICCK 120

Query: 121 GKCVNPMFNRNNCGGCNNKCSRGSSCVYGMCGYA 138
           GKC+  M ++ NCG CNNKC +GSSCVYGMC YA
Sbjct: 121 GKCLKSMSDKKNCGSCNNKCKKGSSCVYGMCSYA 150

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g03410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
STGL1_ARATH4.0e-1843.33Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 S... [more]
STGL2_ARATH7.6e-1742.86Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 S... [more]
STGL3_ARATH1.3e-1640.22Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 S... [more]
GRI_ARATH1.4e-1541.67Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1[more]
STIG1_TOBAC1.1e-1242.86Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1[more]
BLAST of Cp4.1LG20g03410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUQ5_CUCSA1.2e-4869.06Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059710 PE=4 SV=1[more]
B9HZ88_POPTR1.5e-3268.97Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01370g PE=4 SV=2[more]
U5G0D4_POPTR1.5e-3268.97Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01320g PE=4 SV=1[more]
M5X0S4_PRUPE2.0e-3264.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013138mg PE=4 SV=1[more]
W9R9E7_9ROSA2.6e-3271.11Uncharacterized protein OS=Morus notabilis GN=L484_014177 PE=4 SV=1[more]
BLAST of Cp4.1LG20g03410 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11925.14.3e-3450.00 Stigma-specific Stig1 family protein[more]
AT4G26880.12.3e-1943.33 Stigma-specific Stig1 family protein[more]
AT5G55110.14.3e-1842.86 Stigma-specific Stig1 family protein[more]
AT1G50720.17.3e-1840.22 Stigma-specific Stig1 family protein[more]
AT1G53130.18.1e-1741.67 Stigma-specific Stig1 family protein[more]
BLAST of Cp4.1LG20g03410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658347|ref|XP_011652551.1|1.7e-4869.06PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus][more]
gi|659067693|ref|XP_008440806.1|3.2e-4766.91PREDICTED: uncharacterized protein LOC103485113 [Cucumis melo][more]
gi|764549967|ref|XP_011460009.1|2.4e-3476.47PREDICTED: stigma-specific STIG1-like protein 1 [Fragaria vesca subsp. vesca][more]
gi|657959059|ref|XP_008371072.1|9.9e-3360.53PREDICTED: uncharacterized protein LOC103434485 [Malus domestica][more]
gi|764526088|ref|XP_011457947.1|1.3e-3250.00PREDICTED: stigma-specific STIG1-like protein 1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006969Stig1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g03410.1Cp4.1LG20g03410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006969Stigma-specific protein Stig1PANTHERPTHR33227FAMILY NOT NAMEDcoord: 1..137
score: 2.3
IPR006969Stigma-specific protein Stig1PFAMPF04885Stig1coord: 30..137
score: 1.7
NoneNo IPR availablePANTHERPTHR33227:SF4F12F1.21 PROTEINcoord: 1..137
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g03410Cucsa.085560Cucumber (Gy14) v1cgycpeB0159
Cp4.1LG20g03410CmaCh13G007580Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g03410CmoCh13G007890Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g03410CmoCh18G002560Cucurbita moschata (Rifu)cmocpeB403
Cp4.1LG20g03410Cla019356Watermelon (97103) v1cpewmB503
Cp4.1LG20g03410Csa1G058150Cucumber (Chinese Long) v2cpecuB506
Cp4.1LG20g03410MELO3C002433Melon (DHL92) v3.5.1cpemeB477
Cp4.1LG20g03410ClCG03G004450Watermelon (Charleston Gray)cpewcgB463
Cp4.1LG20g03410CSPI01G10250Wild cucumber (PI 183967)cpecpiB506
Cp4.1LG20g03410Lsi02G005710Bottle gourd (USVL1VR-Ls)cpelsiB417
Cp4.1LG20g03410MELO3C002423.2Melon (DHL92) v3.6.1cpemedB559
Cp4.1LG20g03410CsaV3_1G010310Cucumber (Chinese Long) v3cpecucB0624
Cp4.1LG20g03410Bhi08G001480Wax gourdcpewgoB0637
Cp4.1LG20g03410CsGy1G010270Cucumber (Gy14) v2cgybcpeB070
Cp4.1LG20g03410Carg07559Silver-seed gourdcarcpeB1401
Cp4.1LG20g03410Carg06837Silver-seed gourdcarcpeB0697
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g03410Cucurbita pepo (Zucchini)cpecpeB045
Cp4.1LG20g03410Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g03410Cucurbita maxima (Rimu)cmacpeB443
Cp4.1LG20g03410Cucurbita maxima (Rimu)cmacpeB677
Cp4.1LG20g03410Cucurbita moschata (Rifu)cmocpeB405
Cp4.1LG20g03410Cucurbita moschata (Rifu)cmocpeB631
Cp4.1LG20g03410Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g03410Bottle gourd (USVL1VR-Ls)cpelsiB415
Cp4.1LG20g03410Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g03410Watermelon (97103) v1cpewmB513
Cp4.1LG20g03410Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g03410Silver-seed gourdcarcpeB0698