Lsi02G005640 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G005640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Stigma-specific Stig1 family protein, putative
Location	chr02 : 4993994 .. 4994455 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTCTCAAAGATATTCCTTTTGATATCTTTGATAACCATCTCTCATTATTCAGCTCATGCAGCTGAAGTTGAAATGAGCAACAAAGAGAATGCTACTTCATTGGATGACGAAATTTTCGATCATCTTCCTCCCGAGACCGAAAATTCACCGCCGGGTTCGCTCCGTGGCCTTCTCTTTAACTTCGAGTCTCTGCAGAAGGGAGTGACGTGCAACAAATACCCGAGAGTTTGTCGAGCTAAGGGCAGCAGAGGGCCAGATTGTTGCAACAAGAAATGTGTAAATGTGGAGACGGATAGGAACAACTGTGGGATGTGTGGGAATAAATGCAAGTACTCAAGGATATGTTGCAATGGAAGGTGTGTGAATCCGATGTTCAATAAGAAGCATTGTGGAGGTTGCAACAATGAGTGTAGTAAAGGAAGCTTATGTGCGTATGGGATGTGTGACTATGCTTAA

mRNA sequence

ATGAAGTTCTCAAAGATATTCCTTTTGATATCTTTGATAACCATCTCTCATTATTCAGCTCATGCAGCTGAAGTTGAAATGAGCAACAAAGAGAATGCTACTTCATTGGATGACGAAATTTTCGATCATCTTCCTCCCGAGACCGAAAATTCACCGCCGGGTTCGCTCCGTGGCCTTCTCTTTAACTTCGAGTCTCTGCAGAAGGGAGTGACGTGCAACAAATACCCGAGAGTTTGTCGAGCTAAGGGCAGCAGAGGGCCAGATTGTTGCAACAAGAAATGTGTAAATGTGGAGACGGATAGGAACAACTGTGGGATGTGTGGGAATAAATGCAAGTACTCAAGGATATGTTGCAATGGAAGGTGTGTGAATCCGATGTTCAATAAGAAGCATTGTGGAGGTTGCAACAATGAGTGTAGTAAAGGAAGCTTATGTGCGTATGGGATGTGTGACTATGCTTAA

Coding sequence (CDS)

ATGAAGTTCTCAAAGATATTCCTTTTGATATCTTTGATAACCATCTCTCATTATTCAGCTCATGCAGCTGAAGTTGAAATGAGCAACAAAGAGAATGCTACTTCATTGGATGACGAAATTTTCGATCATCTTCCTCCCGAGACCGAAAATTCACCGCCGGGTTCGCTCCGTGGCCTTCTCTTTAACTTCGAGTCTCTGCAGAAGGGAGTGACGTGCAACAAATACCCGAGAGTTTGTCGAGCTAAGGGCAGCAGAGGGCCAGATTGTTGCAACAAGAAATGTGTAAATGTGGAGACGGATAGGAACAACTGTGGGATGTGTGGGAATAAATGCAAGTACTCAAGGATATGTTGCAATGGAAGGTGTGTGAATCCGATGTTCAATAAGAAGCATTGTGGAGGTTGCAACAATGAGTGTAGTAAAGGAAGCTTATGTGCGTATGGGATGTGTGACTATGCTTAA

Protein sequence

MKFSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLPPETENSPPGSLRGLLFNFESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA

Homology

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BLAST of Lsi02G005640 vs. Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1


Query: 72  CNKYPRVCRAKGSRGPD----CCNKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMF 131
           CN+ P +C   G  G +    CCN KC++V +D NNCG C NKCK+S+ CC G+CV   +
Sbjct: 67  CNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAY 126

Query: 132 NKKHCGGCNNECSKGSLCAYGMCDYA 154
           +K+HCG CN+ C  G  C YG+C+YA
Sbjct: 127 DKRHCGQCNHPCELGEFCVYGLCNYA 152

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BLAST of Lsi02G005640 vs. Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-20
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 1


Query: 3   FSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLPPETENSPPGSLRGLLFN 62
           F K+ + I+L T+   +      + + K    +L+D   D  PP T    P       F 
Sbjct: 4   FMKLLVTIALTTV--VTIAIVTTKTTTKTATFALEDPFKDLTPPGTIKIRPSR-----FL 63

Query: 63  FESLQKGVT-----------CNKYPRVCRAKG-SRGPD----CCNKKCVNVETDRNNCGM 122
            E + KG             CNK   +C +   S G +    CCN KC+++ TD  NCG+
Sbjct: 64  AEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGL 123

Query: 123 CGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           C NKCK+ + CC G+CV   ++K+HCG CN+ C  G  C YG+C+YA
Sbjct: 124 CKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]

BLAST of Lsi02G005640 vs. Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.4e-19
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 1


Query: 62  NFESLQKGVTCNKYPRVCRAKGSRGPD--CCNKKCVNVETDRNNCGMCGNKCKYSRICCN 121
           N  +L     CNK   +C+++G       CC+ KCV++  D +NCG C N+CK+++ CC 
Sbjct: 61  NGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCR 120

Query: 122 GRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           G CV   ++K+HCG CN+ C  G  C YG+C+YA
Sbjct: 121 GECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

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BLAST of Lsi02G005640 vs. Swiss-Prot
Match: GRI_ARATH (Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 57/160 (35.62%), Postives = 76/160 (47.50%), Query Frame = 1


Query: 3   FSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDE---IFDHLPPETENSPPGS-LRG 62
           F K   L+SLI      A +    +   E     DD    I D  P    N    S  R 
Sbjct: 9   FIKATSLLSLILYFLIIATSKSNSVLADEVVDQEDDPEYYILDETPSILSNVTISSKTRL 68

Query: 63  LLFNFESLQKGVTCN-KYPRVCRA----KGSRGPDCCNKKCVNVETDRNNCGMCGNKCKY 122
           L+ +++ ++KG+ C+ +   +C      KG+    CC K C NV  DRNNCG CG+KC +
Sbjct: 69  LVSHYKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGF 128

Query: 123 SRICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
            + CC G C    FN  HCG C  +C+ G  C YG C YA
Sbjct: 129 GQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168

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BLAST of Lsi02G005640 vs. Swiss-Prot
Match: STIG1_TOBAC (Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 1


Query: 1   MKFSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLPPETENSPPGSLRGLL 60
           M F  + +LI ++T+S        +  +N+ NAT+           +    PP  L    
Sbjct: 1   MAFINLLILI-ILTLSSTPITTMSIPETNRRNATTNSYTDVALSARKGAFPPPRKLGE-- 60

Query: 61  FNFESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRICCNG 120
           ++  S    + C    + C+    R   C N  CV+V T+R NCG CG  C     CC G
Sbjct: 61  YSTNSTDYNLIC----KTCKRLSERNTCCFNYSCVDVSTNRFNCGSCGLVCNLGTRCCGG 120

Query: 121 RCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
            CV+   +  +CG C+N CS G  C++G CDYA
Sbjct: 121 ICVDIQKDNGNCGKCSNVCSPGQKCSFGFCDYA 146

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BLAST of Lsi02G005640 vs. TrEMBL
Match: A0A0A0LRD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058150 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.5e-65
Identity = 115/129 (89.15%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 27  MSNKENATSLDDEIFDHLPP--ETENSPPGSLRGLLFNFESLQKGVTCNKYPRVCRAKGS 86
           MSNKEN TSLDDE FD L P  ET+NSP GS+RGLLFNFESLQKGVTCNKYPRVCRAKGS
Sbjct: 1   MSNKENVTSLDDETFDQLSPVEETKNSPSGSVRGLLFNFESLQKGVTCNKYPRVCRAKGS 60

Query: 87  RGPDCCNKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGSL 146
           +GPDCCN+KCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKG+ 
Sbjct: 61  KGPDCCNRKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGNY 120

Query: 147 CAYGMCDYA 154
           CA+GMCDYA
Sbjct: 121 CAFGMCDYA 129

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BLAST of Lsi02G005640 vs. TrEMBL
Match: A0A0A0LWX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058155 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.0e-56
Identity = 110/157 (70.06%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MKFSKIFLLISL-ITISHYSAHAAEVEMSNKENATSL-DDEIFDHLPP-ETENSPPGSLR 60
           MK  K+FL + L I  SHY++HAAEVE ++KENAT+L DDE+ +HL   E E+SP G  R
Sbjct: 1   MKIVKLFLFLVLAIIFSHYASHAAEVETNSKENATNLSDDEVSNHLASIEDEDSPLGLAR 60

Query: 61  GLLFNFESLQKGV-TCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRI 120
            LLF F+SLQKG+ TCNKYPRVCR KGS GPDCC KKCVNVE DRNNCG CG KCKYS+I
Sbjct: 61  RLLFPFQSLQKGLLTCNKYPRVCRRKGSAGPDCCKKKCVNVERDRNNCGRCGKKCKYSKI 120

Query: 121 CCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           CC G+CVNP+FN+KHCGGCN ECSKGS C YGMC YA
Sbjct: 121 CCKGKCVNPLFNRKHCGGCNIECSKGSFCVYGMCGYA 157

[Close]

BLAST of Lsi02G005640 vs. TrEMBL
Match: A0A061GGS8_THECC (Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030273 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 88/159 (55.35%), Postives = 108/159 (67.92%), Query Frame = 1


Query: 1   MKFSKIFLLISLITISHYSAHAA-----EVEMSNKENATSLDDEIFDHLPPETENSPPGS 60
           MK  K+FL+++L+  S  S  AA     E  + N ++A+ + D++   LP       P S
Sbjct: 60  MKLVKVFLMLALLMASAISLSAAAPSEEEPFVDNDDDASEVADDL---LPSADGQEQPTS 119

Query: 61  LRGLL-FNFESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYS 120
           LRG   F  +  +  +TCNKYPRVCR  GS GPDCC KKCVNV+TDR NCGMCG KCKYS
Sbjct: 120 LRGASRFLAQKPRAVMTCNKYPRVCRVAGSPGPDCCKKKCVNVKTDRLNCGMCGKKCKYS 179

Query: 121 RICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
            ICC G+CVNPM +K+HCGGCNN+CSKGS C YGMC YA
Sbjct: 180 EICCKGKCVNPMSHKRHCGGCNNQCSKGSKCLYGMCSYA 215

[Close]

BLAST of Lsi02G005640 vs. TrEMBL
Match: A0A067JDB4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21184 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 85/156 (54.49%), Postives = 108/156 (69.23%), Query Frame = 1


Query: 1   MKFSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLP-PETENSPPGSLRGL 60
           MK  KIFLL++++      A +++ E    +N  +LD+     +P PE + + P SLRG+
Sbjct: 1   MKTLKIFLLVAMLMAFAAIALSSQEESFVDDNDDTLDEN--SDIPWPENQQTTPTSLRGI 60

Query: 61  LFNF--ESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRIC 120
              F  ++ ++ +TC+ YPRVCRAKGS GPDCC KKCVNV TD+ NCG CG KCKY  IC
Sbjct: 61  TNRFLAQASREAMTCDNYPRVCRAKGSPGPDCCKKKCVNVATDKTNCGKCGRKCKYPEIC 120

Query: 121 CNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           C G CVNPM NKKHCGGCNN+C KGS C+YGMC YA
Sbjct: 121 CKGACVNPMSNKKHCGGCNNKCKKGSTCSYGMCSYA 154

[Close]

BLAST of Lsi02G005640 vs. TrEMBL
Match: A0A061GH84_THECC (Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030276 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39
Identity = 86/159 (54.09%), Postives = 106/159 (66.67%), Query Frame = 1


Query: 1   MKFSKIFLLISL-----ITISHYSAHAAEVEMSNKENATSLDDEIFDHLPPETENSPPGS 60
           MK  K+FL++ L     IT+S  +    E  + N ++A+ + D++   LP         S
Sbjct: 1   MKLVKVFLMLVLLMALAITLSAAAPSEEEPLVDNDDDASEVADDL---LPSADGQEQRTS 60

Query: 61  LRGLL-FNFESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYS 120
           LRG   F  +  +  +TCNKYPRVCR  GS GPDCC KKCVNV+TDR NCGMCG KCKYS
Sbjct: 61  LRGASRFLAQKPRAVMTCNKYPRVCRVAGSPGPDCCKKKCVNVKTDRLNCGMCGKKCKYS 120

Query: 121 RICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
            ICC G+CVNPM +K+HCGGCNN+CSKGS C YGMC YA
Sbjct: 121 EICCKGKCVNPMSHKRHCGGCNNQCSKGSKCLYGMCSYA 156

[Close]

BLAST of Lsi02G005640 vs. TAIR10
Match: AT1G11925.1 (AT1G11925.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-30
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 70  VTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNK 129
           +TC+K  +VCR KGS G +CC KKCV++ T++ NCG CG  C+YS +CCNG CVNPMF++
Sbjct: 57  LTCDKSSKVCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDR 116

Query: 130 KHCGGCNNECSKGSLCAYGMCDYA 154
           +HCGGC  +C KG  CAYGMC YA
Sbjct: 117 RHCGGCFKKCKKGRSCAYGMCSYA 140

[Close]

BLAST of Lsi02G005640 vs. TAIR10
Match: AT4G26880.1 (AT4G26880.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-23
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1


Query: 72  CNKYPRVCRAKGSRGPD----CCNKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMF 131
           CN+ P +C   G  G +    CCN KC++V +D NNCG C NKCK+S+ CC G+CV   +
Sbjct: 67  CNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAY 126

Query: 132 NKKHCGGCNNECSKGSLCAYGMCDYA 154
           +K+HCG CN+ C  G  C YG+C+YA
Sbjct: 127 DKRHCGQCNHPCELGEFCVYGLCNYA 152

[Close]

BLAST of Lsi02G005640 vs. TAIR10
Match: AT5G55110.1 (AT5G55110.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 1


Query: 3   FSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLPPETENSPPGSLRGLLFN 62
           F K+ + I+L T+   +      + + K    +L+D   D  PP T    P       F 
Sbjct: 4   FMKLLVTIALTTV--VTIAIVTTKTTTKTATFALEDPFKDLTPPGTIKIRPSR-----FL 63

Query: 63  FESLQKGVT-----------CNKYPRVCRAKG-SRGPD----CCNKKCVNVETDRNNCGM 122
            E + KG             CNK   +C +   S G +    CCN KC+++ TD  NCG+
Sbjct: 64  AEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGL 123

Query: 123 CGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           C NKCK+ + CC G+CV   ++K+HCG CN+ C  G  C YG+C+YA
Sbjct: 124 CKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]

BLAST of Lsi02G005640 vs. TAIR10
Match: AT1G50720.1 (AT1G50720.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 1


Query: 62  NFESLQKGVTCNKYPRVCRAKGSRGPD--CCNKKCVNVETDRNNCGMCGNKCKYSRICCN 121
           N  +L     CNK   +C+++G       CC+ KCV++  D +NCG C N+CK+++ CC 
Sbjct: 61  NGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCR 120

Query: 122 GRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           G CV   ++K+HCG CN+ C  G  C YG+C+YA
Sbjct: 121 GECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

[Close]

BLAST of Lsi02G005640 vs. TAIR10
Match: AT1G53130.1 (AT1G53130.1 Stigma-specific Stig1 family protein)

HSP 1 Score: 87.8 bits (216), Expect = 6.3e-18
Identity = 57/160 (35.62%), Postives = 76/160 (47.50%), Query Frame = 1


Query: 3   FSKIFLLISLITISHYSAHAAEVEMSNKENATSLDDE---IFDHLPPETENSPPGS-LRG 62
           F K   L+SLI      A +    +   E     DD    I D  P    N    S  R 
Sbjct: 9   FIKATSLLSLILYFLIIATSKSNSVLADEVVDQEDDPEYYILDETPSILSNVTISSKTRL 68

Query: 63  LLFNFESLQKGVTCN-KYPRVCRA----KGSRGPDCCNKKCVNVETDRNNCGMCGNKCKY 122
           L+ +++ ++KG+ C+ +   +C      KG+    CC K C NV  DRNNCG CG+KC +
Sbjct: 69  LVSHYKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGF 128

Query: 123 SRICCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
            + CC G C    FN  HCG C  +C+ G  C YG C YA
Sbjct: 129 GQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168

[Close]

BLAST of Lsi02G005640 vs. NCBI nr
Match: gi|659067675|ref|XP_008440707.1| (PREDICTED: uncharacterized protein LOC103485044 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 7.6e-74
Identity = 133/155 (85.81%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MKFSKI-FLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLPP-ETENSPPGSLRG 60
           MK SK+ FLL++L  +SHY AHAA+ EMSNKEN TS DDE FD L P ETENSPPGSLRG
Sbjct: 1   MKSSKLLFLLVALTIVSHYVAHAAKAEMSNKENVTSSDDETFDQLSPMETENSPPGSLRG 60

Query: 61  LLFNFESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRICC 120
           LLFNFESLQKGVTCNKYPRVCRAKGS+GPDCCN+KCVNVETDRNNCGMCGNKCKYSRICC
Sbjct: 61  LLFNFESLQKGVTCNKYPRVCRAKGSKGPDCCNRKCVNVETDRNNCGMCGNKCKYSRICC 120

Query: 121 NGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           NGRCVNPMFNKKHCGGCNNECSKG+ CA+GMCDYA
Sbjct: 121 NGRCVNPMFNKKHCGGCNNECSKGNYCAFGMCDYA 155

[Close]

BLAST of Lsi02G005640 vs. NCBI nr
Match: gi|449454907|ref|XP_004145195.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 3.8e-73
Identity = 132/156 (84.62%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 1   MKFSK-IFLLISLITISHYSAHAAEVEMSNKENATSLDDEIFDHLPP--ETENSPPGSLR 60
           MKFSK +FL ++LI +SHY AHA+ VEMSNKEN TSLDDE FD L P  ET+NSP GS+R
Sbjct: 1   MKFSKPLFLWVALIIVSHYVAHASIVEMSNKENVTSLDDETFDQLSPVEETKNSPSGSVR 60

Query: 61  GLLFNFESLQKGVTCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRIC 120
           GLLFNFESLQKGVTCNKYPRVCRAKGS+GPDCCN+KCVNVETDRNNCGMCGNKCKYSRIC
Sbjct: 61  GLLFNFESLQKGVTCNKYPRVCRAKGSKGPDCCNRKCVNVETDRNNCGMCGNKCKYSRIC 120

Query: 121 CNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           CNGRCVNPMFNKKHCGGCNNECSKG+ CA+GMCDYA
Sbjct: 121 CNGRCVNPMFNKKHCGGCNNECSKGNYCAFGMCDYA 156

[Close]

BLAST of Lsi02G005640 vs. NCBI nr
Match: gi|700209384|gb|KGN64480.1| (hypothetical protein Csa_1G058150 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 6.4e-65
Identity = 115/129 (89.15%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 27  MSNKENATSLDDEIFDHLPP--ETENSPPGSLRGLLFNFESLQKGVTCNKYPRVCRAKGS 86
           MSNKEN TSLDDE FD L P  ET+NSP GS+RGLLFNFESLQKGVTCNKYPRVCRAKGS
Sbjct: 1   MSNKENVTSLDDETFDQLSPVEETKNSPSGSVRGLLFNFESLQKGVTCNKYPRVCRAKGS 60

Query: 87  RGPDCCNKKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGSL 146
           +GPDCCN+KCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKG+ 
Sbjct: 61  KGPDCCNRKCVNVETDRNNCGMCGNKCKYSRICCNGRCVNPMFNKKHCGGCNNECSKGNY 120

Query: 147 CAYGMCDYA 154
           CA+GMCDYA
Sbjct: 121 CAFGMCDYA 129

[Close]

BLAST of Lsi02G005640 vs. NCBI nr
Match: gi|659067677|ref|XP_008440721.1| (PREDICTED: uncharacterized protein LOC103485051 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 112/157 (71.34%), Postives = 128/157 (81.53%), Query Frame = 1


Query: 1   MKFSKIFLLISL-ITISHYSAHAAEVEMSNKENATSL-DDEIFDHLPP-ETENSPPGSLR 60
           MK SK+ L + L IT SHY++HAAEVE ++KENAT+L DDE+ +HL P E E+SP G  R
Sbjct: 1   MKLSKLLLFLVLAITFSHYASHAAEVETNSKENATNLSDDEVSNHLAPIEDEDSPMGLAR 60

Query: 61  GLLFNFESLQKGV-TCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRI 120
            LLF F+SLQKG+ TCNKYPRVCR KGS GPDCC KKCVNVE DRNNCG CG KCKYS+I
Sbjct: 61  RLLFPFQSLQKGLLTCNKYPRVCRRKGSAGPDCCKKKCVNVERDRNNCGRCGKKCKYSKI 120

Query: 121 CCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           CC G+CVNP+FN+KHCGGCN ECSKGS C YGMC YA
Sbjct: 121 CCKGKCVNPLFNRKHCGGCNIECSKGSFCVYGMCGYA 157

[Close]

BLAST of Lsi02G005640 vs. NCBI nr
Match: gi|449454905|ref|XP_004145194.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 7.1e-56
Identity = 110/157 (70.06%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MKFSKIFLLISL-ITISHYSAHAAEVEMSNKENATSL-DDEIFDHLPP-ETENSPPGSLR 60
           MK  K+FL + L I  SHY++HAAEVE ++KENAT+L DDE+ +HL   E E+SP G  R
Sbjct: 1   MKIVKLFLFLVLAIIFSHYASHAAEVETNSKENATNLSDDEVSNHLASIEDEDSPLGLAR 60

Query: 61  GLLFNFESLQKGV-TCNKYPRVCRAKGSRGPDCCNKKCVNVETDRNNCGMCGNKCKYSRI 120
            LLF F+SLQKG+ TCNKYPRVCR KGS GPDCC KKCVNVE DRNNCG CG KCKYS+I
Sbjct: 61  RLLFPFQSLQKGLLTCNKYPRVCRRKGSAGPDCCKKKCVNVERDRNNCGRCGKKCKYSKI 120

Query: 121 CCNGRCVNPMFNKKHCGGCNNECSKGSLCAYGMCDYA 154
           CC G+CVNP+FN+KHCGGCN ECSKGS C YGMC YA
Sbjct: 121 CCKGKCVNPLFNRKHCGGCNIECSKGSFCVYGMCGYA 157

The following BLAST results are available for this feature:

BLAST of Lsi02G005640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STGL1_ARATH	3.9e-22	48.84	Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 S...	[more]
STGL2_ARATH	2.2e-20	34.13	Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 S...	[more]
STGL3_ARATH	2.4e-19	41.49	Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 S...	[more]
GRI_ARATH	1.1e-16	35.63	Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1	[more]
STIG1_TOBAC	3.3e-13	31.37	Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1	[more]

BLAST of Lsi02G005640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRD7_CUCSA	4.5e-65	89.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058150 PE=4 SV=1	[more]
A0A0A0LWX5_CUCSA	5.0e-56	70.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058155 PE=4 SV=1	[more]
A0A061GGS8_THECC	3.5e-41	55.35	Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030273 ...	[more]
A0A067JDB4_JATCU	3.5e-41	54.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21184 PE=4 SV=1	[more]
A0A061GH84_THECC	1.9e-39	54.09	Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030276 ...	[more]

BLAST of Lsi02G005640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11925.1	4.2e-30	60.71	Stigma-specific Stig1 family protein	[more]
AT4G26880.1	2.2e-23	48.84	Stigma-specific Stig1 family protein	[more]
AT5G55110.1	1.2e-21	34.13	Stigma-specific Stig1 family protein	[more]
AT1G50720.1	1.3e-20	41.49	Stigma-specific Stig1 family protein	[more]
AT1G53130.1	6.3e-18	35.63	Stigma-specific Stig1 family protein	[more]

BLAST of Lsi02G005640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067675\|ref\|XP_008440707.1\|	7.6e-74	85.81	PREDICTED: uncharacterized protein LOC103485044 [Cucumis melo]	[more]
gi\|449454907\|ref\|XP_004145195.1\|	3.8e-73	84.62	PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]	[more]
gi\|700209384\|gb\|KGN64480.1\|	6.4e-65	89.15	hypothetical protein Csa_1G058150 [Cucumis sativus]	[more]
gi\|659067677\|ref\|XP_008440721.1\|	1.3e-57	71.34	PREDICTED: uncharacterized protein LOC103485051 [Cucumis melo]	[more]
gi\|449454905\|ref\|XP_004145194.1\|	7.1e-56	70.06	PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006969	Stig1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009405	pathogenesis
biological_process	GO:0006810	transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008200	ion channel inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G005640.1	Lsi02G005640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006969	Stigma-specific protein Stig1	PANTHER	PTHR33227	FAMILY NOT NAMED	coord: 1..153 score: 2.0
IPR006969	Stigma-specific protein Stig1	PFAM	PF04885	Stig1	coord: 13..153 score: 5.4
None	No IPR available	PANTHER	PTHR33227:SF4	F12F1.21 PROTEIN	coord: 1..153 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G005640	Csa1G059710	Cucumber (Chinese Long) v2	culsiB040
Lsi02G005640	Csa1G058150	Cucumber (Chinese Long) v2	culsiB022
Lsi02G005640	CSPI01G10250	Wild cucumber (PI 183967)	cpilsiB021
Lsi02G005640	Cucsa.134350	Cucumber (Gy14) v1	cgylsiB211
Lsi02G005640	CmaCh18G002750	Cucurbita maxima (Rimu)	cmalsiB373
Lsi02G005640	CmoCh13G007890	Cucurbita moschata (Rifu)	cmolsiB200
Lsi02G005640	CmoCh18G002560	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G005640	Cla019349	Watermelon (97103) v1	lsiwmB184
Lsi02G005640	MELO3C002423	Melon (DHL92) v3.5.1	lsimeB179
Lsi02G005640	ClCG03G004340	Watermelon (Charleston Gray)	lsiwcgB184
Lsi02G005640	MELO3C002433.2	Melon (DHL92) v3.6.1	lsimedB187
Lsi02G005640	MELO3C002423.2	Melon (DHL92) v3.6.1	lsimedB189
Lsi02G005640	Cla97C03G055530	Watermelon (97103) v2	lsiwmbB176
Lsi02G005640	Bhi08G001480	Wax gourd	lsiwgoB243
Lsi02G005640	Cp4.1LG09g09220	Cucurbita pepo (Zucchini)	cpelsiB026
Lsi02G005640	CsGy1G010270	Cucumber (Gy14) v2	cgyblsiB018
Lsi02G005640	CsaV3_1G010310	Cucumber (Chinese Long) v3	cuclsiB022
Lsi02G005640	CsaV3_1G010450	Cucumber (Chinese Long) v3	cuclsiB045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G005640	Cucumber (Gy14) v1	cgylsiB094
Lsi02G005640	Cucurbita maxima (Rimu)	cmalsiB202
Lsi02G005640	Cucurbita moschata (Rifu)	cmolsiB192
Lsi02G005640	Wild cucumber (PI 183967)	cpilsiB030
Lsi02G005640	Melon (DHL92) v3.5.1	lsimeB178
Lsi02G005640	Silver-seed gourd	carlsiB447
Lsi02G005640	Silver-seed gourd	carlsiB918
Lsi02G005640	Cucumber (Chinese Long) v3	cuclsiB029