CmoCh08G011680 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G011680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B) (1.6.5.3)
LocationCmo_Chr08 : 7435884 .. 7438290 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTCCTCACTCGGGGTCTTGTCTGCATTTCTCTCAGATTCTCACTTTAGTTCACGAAACTCGAACCCAGTGGATTGAAAGGTTTGAAAAATTCCATTTCTGAAACGAAATTTCATTCTGTTAGTTGGATTTTCTTTTTGTATCGAGAGGCAGTTCGTTTGGTTGGTAATGAGAAAATGAATTAGGATGGGGACGTATTTCCTGCCATGATTTATGAGCAGTTTTTTTTTTTCTTTCTGCAACGATTACCATGCTAAATGATCTTTTTTCTGTTGTTTTTTCTTGGTGAAATCAGGAATTGATCGAATTAAAGATGGCGAGTGCAGTCGATGCTGCTGGAGATCCGATTCCTACATCAGCGGTGTTAATGTCCTCGTCAAAGCACATTGCGAACATGTGTCGATCGGAGAATGTGGCATACCTCCAGTGCAAAAGGAAGGATCCGAACCCGGAGAAATGCCTCGAAAAAGGCCAACAAGTTACTCGCTGCGTCCTCTCCCTGTAAGTGAATTACCTCTTTGTTGTTTTCATAGCCGAAGTTCGAATTCGCCACTTTTCATCGGCTTTGGTTTATATTTTCCGGAAATTTGCTTTAGTTATCATATGATCGTCTTCTAATCTGCAAGCAAATACATGATTAGGTAATACACTGCTTTAGCAATCATATGGTCGTTATCTGATCCGCTAGAGTAGAAGACTAGGAAGAGTAAGGGTTGTTTCTTAAACTTGATATAAAAATTATTAGTGCCGGTGCTGGTAAGATTTTACGTTGATAATCTTTTATCTGACTAAATTTATGGTGAGCATGGTAGACATTATCCGAAATCACCCGTTCATAGTTAAGCACCTTTAGCTTAGGTGCACGGTGGAAATATTGGATTGTGGAGGTCTTCCAGATTTTGAAGGATTGCAAGCATTCATGATTTAGATCTCTTTAGTGGCATTGAAGTGGTAGTTTCACAGTTCATGGTTCAGCATTTCTAATCTTTGGATGAGGAATTCAATGAACAACTTTCGGTTGGTTGAGCTGGAATTTGCTAGGTTATGCTAATTTCCAGTTTCAAGAGGCTGGATAGTTGATTTTTCAAGTTTTTTTTTTGAAGTCAAACCTCTATCTAGAAAGCTTTTATGGCTACGGCTTGTTATCATTAATTATTACAATTTTTTTTTTTTTTGTTGTACATTGGGTTTTTACAAATGACACGAAGAGTAGTTTTCTTCATCTTTTACTTGGTCCCCTATATTCTCCAAGATTACGTTTGTTATGGGTTAATAACGTCAAAGCTATTGTTTCTGAGTTTTGGTTGGACTGCTTTCAAAGGAATTTTGAATAAGCAACAATGTTGGTTTGAGCGGCTTGAGTTTCCCAGATTGAAAGCTTCACAGTGGTGTTCTTTGTCTAAATTTATTGGTCATTTCTCTTTTTAGAATATTTGCTTGAATAGGGATGGTTTCATATTTTCATATAGTTTGTTACTTTTCTCTTTTCTTTTTCTTCTCTCCCTTTGAAGGTTTGTATTATCAGACATTTGTTACCTCTCATTTTATCGATAAAAAATTTCCCATCTTGTTTGTGTTGGACGAACACTACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATTCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCCGATTTGGGACTTCCATCATCCAACACCTCCTCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTACTGCCTTCGAGGAGGGGCTTGGCTCCTTTTCTTTAAGAGTTCTTTGTTCGATATTTGAGGATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACTACTCTTCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATTTCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTCCATCATCCAACGGTTTGAAAAAAAAATTTGTGAATACAAGTGAATGATACGAGAAATATCATTGATGAATGAACAATTTTCATTTCACAATATTTAGAGATAATAGCTTTGTTTAGTAAACATTAGTACTTGTTAAATAATTAACCGAGAGGCTGCTTCTGTTTGCAGGCTTAAAGATCTTCATCAAAGGTGCACAAAAGAGATGGATGCTTATGTCGGTTGCATGTACTACAATACAAATGAGTTTGATTTATGTCGCAAAGAGCAGGAAGCATTCGAGAAAGCATGTCCCTTGGAATGA

mRNA sequence

CTTTCTCCTCACTCGGGGTCTTGTCTGCATTTCTCTCAGATTCTCACTTTAGTTCACGAAACTCGAACCCAGTGGATTGAAAGGAATTGATCGAATTAAAGATGGCGAGTGCAGTCGATGCTGCTGGAGATCCGATTCCTACATCAGCGGTGTTAATGTCCTCGTCAAAGCACATTGCGAACATGTGTCGATCGGAGAATGTGGCATACCTCCAGTGCAAAAGGAAGGATCCGAACCCGGAGAAATGCCTCGAAAAAGGCCAACAAGTTACTCGCTGCGTCCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACAAAAGAGATGGATGCTTATGTCGGTTGCATGTACTACAATACAAATGAGTTTGATTTATGTCGCAAAGAGCAGGAAGCATTCGAGAAAGCATGTCCCTTGGAATGA

Coding sequence (CDS)

ATGGCGAGTGCAGTCGATGCTGCTGGAGATCCGATTCCTACATCAGCGGTGTTAATGTCCTCGTCAAAGCACATTGCGAACATGTGTCGATCGGAGAATGTGGCATACCTCCAGTGCAAAAGGAAGGATCCGAACCCGGAGAAATGCCTCGAAAAAGGCCAACAAGTTACTCGCTGCGTCCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACAAAAGAGATGGATGCTTATGTCGGTTGCATGTACTACAATACAAATGAGTTTGATTTATGTCGCAAAGAGCAGGAAGCATTCGAGAAAGCATGTCCCTTGGAATGA
Homology
[Close]
BLAST of CmoCh08G011680 vs. Swiss-Prot
Match: NDA8B_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana GN=At5g18800 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.6e-44
Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCL+KG+ VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CmoCh08G011680 vs. Swiss-Prot
Match: NDA8A_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis thaliana GN=At3g06310 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.2e-43
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 1 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCLEKG+ VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CmoCh08G011680 vs. Swiss-Prot
Match: NDUA8_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Gorilla gorilla gorilla GN=NDUFA8 PE=2 SV=3)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-09
Identity = 28/94 (29.79%), Postives = 52/94 (55.32%), Query Frame = 1 

Query: 14  TSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCVLSLLKDLHQRCTK 73
           +SAVL +++ H    C   N  ++ C+ ++ +P +CLE+G+ V +C L   + + + C +
Sbjct: 21  SSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAE 80

Query: 74  EMDAYVGCMYYNTNE-FDLCRKEQEAFEKACPLE 107
               Y  C+ Y   + F  CRK+Q  F++ C L+
Sbjct: 81  PFTEYWTCIDYTGQQLFRHCRKQQAKFDE-CVLD 113

[Close]
BLAST of CmoCh08G011680 vs. Swiss-Prot
Match: NDUA8_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Homo sapiens GN=NDUFA8 PE=1 SV=3)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-09
Identity = 28/94 (29.79%), Postives = 52/94 (55.32%), Query Frame = 1 

Query: 14  TSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCVLSLLKDLHQRCTK 73
           +SAVL +++ H    C   N  ++ C+ ++ +P +CLE+G+ V +C L   + + + C +
Sbjct: 21  SSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAE 80

Query: 74  EMDAYVGCMYYNTNE-FDLCRKEQEAFEKACPLE 107
               Y  C+ Y   + F  CRK+Q  F++ C L+
Sbjct: 81  PFTEYWTCIDYTGQQLFRHCRKQQAKFDE-CVLD 113

[Close]
BLAST of CmoCh08G011680 vs. Swiss-Prot
Match: NDUA8_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Pan troglodytes GN=NDUFA8 PE=2 SV=3)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-09
Identity = 28/94 (29.79%), Postives = 52/94 (55.32%), Query Frame = 1 

Query: 14  TSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCVLSLLKDLHQRCTK 73
           +SAVL +++ H    C   N  ++ C+ ++ +P +CLE+G+ V +C L   + + + C +
Sbjct: 21  SSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAE 80

Query: 74  EMDAYVGCMYYNTNE-FDLCRKEQEAFEKACPLE 107
               Y  C+ Y   + F  CRK+Q  F++ C L+
Sbjct: 81  PFTEYWTCIDYTGQQLFRHCRKQQAKFDE-CVLD 113

[Close]
BLAST of CmoCh08G011680 vs. TrEMBL
Match: A0A0A0LY30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538810 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.7e-51
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCL+KG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CmoCh08G011680 vs. TrEMBL
Match: A0A059B5M4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03663 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-46
Identity = 89/106 (83.96%), Postives = 98/106 (92.45%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MAS+VDA G+PIPTSAVLM+SSKHIA  CR ENVA+L+CK+KDPNPEKCLEKG++VTRCV
Sbjct: 1   MASSVDATGEPIPTSAVLMASSKHIATRCRPENVAFLKCKQKDPNPEKCLEKGREVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LLKDLHQRCTKEMD YVGCMYY TNEFDLCRKEQ+ FEKACPLE
Sbjct: 61  LGLLKDLHQRCTKEMDDYVGCMYYYTNEFDLCRKEQQEFEKACPLE 106

[Close]
BLAST of CmoCh08G011680 vs. TrEMBL
Match: M5XT71_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013741mg PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.2e-46
Identity = 88/105 (83.81%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MASAVDAAGDPIPTSAVL ++SKHI   C++ENVA+L+CK+KDPNPEKCL+KG+QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLTAASKHIQFQCQAENVAFLKCKKKDPNPEKCLDKGRQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPL 106
           LSLLKDLHQRCTKEMDAYVGCMYYNTNEF+LCRKEQ+ FEK CPL
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFELCRKEQDEFEKKCPL 105

[Close]
BLAST of CmoCh08G011680 vs. TrEMBL
Match: W9RRZ0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011279 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.5e-46
Identity = 88/106 (83.02%), Postives = 100/106 (94.34%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MASAVDA+G+PIPTSAVLM+SSKHIA  C+SENV +L+CK++DPNPEKCL+KGQQVTRCV
Sbjct: 1   MASAVDASGEPIPTSAVLMASSKHIALRCQSENVEFLKCKKQDPNPEKCLDKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LL+DLHQRCTKEMD+YVGCMYYNTNEFDLCRKEQ+ FEKAC LE
Sbjct: 61  LGLLRDLHQRCTKEMDSYVGCMYYNTNEFDLCRKEQQEFEKACRLE 106

[Close]
BLAST of CmoCh08G011680 vs. TrEMBL
Match: A0A059D101_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01248 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.5e-46
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MA+++DAAG PIPTSAVL +SSKHI   C SENVA+L+CK+KDPNPEKCLEKGQQVTRCV
Sbjct: 5   MATSLDAAGGPIPTSAVLTASSKHIGASCLSENVAFLKCKQKDPNPEKCLEKGQQVTRCV 64

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPL 106
           L LLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQ+AFEKACPL
Sbjct: 65  LHLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACPL 109

[Close]
BLAST of CmoCh08G011680 vs. TAIR10
Match: AT5G18800.1 (AT5G18800.1 Cox19-like CHCH family protein)

HSP 1 Score: 177.2 bits (448), Expect = 5.4e-45
Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCL+KG+ VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CmoCh08G011680 vs. TAIR10
Match: AT3G06310.1 (AT3G06310.1 Cox19-like CHCH family protein)

HSP 1 Score: 174.1 bits (440), Expect = 4.6e-44
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 1 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCLEKG+ VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CmoCh08G011680 vs. NCBI nr
Match: gi|449435544|ref|XP_004135555.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-51
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCL+KG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CmoCh08G011680 vs. NCBI nr
Match: gi|802578268|ref|XP_012069439.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 195.7 bits (496), Expect = 4.2e-47
Identity = 90/106 (84.91%), Postives = 99/106 (93.40%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MASAVDA G+PIPTSAVLM+SS+HI   C  ENVA+L+CK+KDPNPEKCL+KGQQVTRCV
Sbjct: 1   MASAVDATGNPIPTSAVLMASSRHIGTRCYEENVAFLKCKKKDPNPEKCLDKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQ+AFEKACPLE
Sbjct: 61  LGLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACPLE 106

[Close]
BLAST of CmoCh08G011680 vs. NCBI nr
Match: gi|1009141706|ref|XP_015888336.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 195.7 bits (496), Expect = 4.2e-47
Identity = 89/106 (83.96%), Postives = 100/106 (94.34%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MA  VDAAGDPIPTSAVLM+SSKHIA  C++ENV +++CK+KDPNPEKCLEKG+QVTRCV
Sbjct: 1   MAGTVDAAGDPIPTSAVLMASSKHIAFKCQAENVEFIKCKKKDPNPEKCLEKGKQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LL+DLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQ+AFEKACPL+
Sbjct: 61  LGLLRDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKACPLD 106

[Close]
BLAST of CmoCh08G011680 vs. NCBI nr
Match: gi|702445322|ref|XP_010024485.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-46
Identity = 89/106 (83.96%), Postives = 98/106 (92.45%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MAS+VDA G+PIPTSAVLM+SSKHIA  CR ENVA+L+CK+KDPNPEKCLEKG++VTRCV
Sbjct: 1   MASSVDATGEPIPTSAVLMASSKHIATRCRPENVAFLKCKQKDPNPEKCLEKGREVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 107
           L LLKDLHQRCTKEMD YVGCMYY TNEFDLCRKEQ+ FEKACPLE
Sbjct: 61  LGLLKDLHQRCTKEMDDYVGCMYYYTNEFDLCRKEQQEFEKACPLE 106

[Close]
BLAST of CmoCh08G011680 vs. NCBI nr
Match: gi|596195955|ref|XP_007223574.1| (hypothetical protein PRUPE_ppa013741mg [Prunus persica])

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-46
Identity = 88/105 (83.81%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60
           MASAVDAAGDPIPTSAVL ++SKHI   C++ENVA+L+CK+KDPNPEKCL+KG+QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLTAASKHIQFQCQAENVAFLKCKKKDPNPEKCLDKGRQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPL 106
           LSLLKDLHQRCTKEMDAYVGCMYYNTNEF+LCRKEQ+ FEK CPL
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFELCRKEQDEFEKKCPL 105

The following BLAST results are available for this feature:
BLAST of CmoCh08G011680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDA8B_ARATH9.6e-4476.42NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis th... [more]
NDA8A_ARATH8.2e-4375.96NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis th... [more]
NDUA8_GORGO5.9e-0929.79NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Gorilla gorilla ... [more]
NDUA8_HUMAN5.9e-0929.79NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Homo sapiens GN=... [more]
NDUA8_PANTR5.9e-0929.79NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Pan troglodytes ... [more]
BLAST of CmoCh08G011680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY30_CUCSA5.7e-5193.40Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538810 PE=4 SV=1[more]
A0A059B5M4_EUCGR2.5e-4683.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03663 PE=4 SV=1[more]
M5XT71_PRUPE3.2e-4683.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013741mg PE=4 SV=1[more]
W9RRZ0_9ROSA5.5e-4683.02Uncharacterized protein OS=Morus notabilis GN=L484_011279 PE=4 SV=1[more]
A0A059D101_EUCGR5.5e-4684.76Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01248 PE=4 SV=1[more]
BLAST of CmoCh08G011680 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18800.15.4e-4576.42 Cox19-like CHCH family protein[more]
AT3G06310.14.6e-4475.96 Cox19-like CHCH family protein[more]
BLAST of CmoCh08G011680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435544|ref|XP_004135555.1|8.1e-5193.40PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|802578268|ref|XP_012069439.1|4.2e-4784.91PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|1009141706|ref|XP_015888336.1|4.2e-4783.96PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|702445322|ref|XP_010024485.1|3.5e-4683.96PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|596195955|ref|XP_007223574.1|4.6e-4683.81hypothetical protein PRUPE_ppa013741mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010625CHCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G011680.1CmoCh08G011680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010625CHCHPFAMPF06747CHCHcoord: 71..104
score: 1.3
NoneNo IPR availablePANTHERPTHR13344NADH-UBIQUINONE OXIDOREDUCTASEcoord: 1..104
score: 6.2
NoneNo IPR availablePANTHERPTHR13344:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 8coord: 1..104
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G011680CmaCh08G011950Cucurbita maxima (Rimu)cmacmoB912
CmoCh08G011680Cla009349Watermelon (97103) v1cmowmB867
CmoCh08G011680MELO3C021376Melon (DHL92) v3.5.1cmomeB800
CmoCh08G011680ClCG06G005540Watermelon (Charleston Gray)cmowcgB799
CmoCh08G011680Cp4.1LG12g02520Cucurbita pepo (Zucchini)cmocpeB833
CmoCh08G011680Cp4.1LG17g01000Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G011680Cla97C06G115050Watermelon (97103) v2cmowmbB896
CmoCh08G011680Carg05477Silver-seed gourdcarcmoB0104
CmoCh08G011680Carg15950Silver-seed gourdcarcmoB0449
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G011680CmoCh17G002830Cucurbita moschata (Rifu)cmocmoB310
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G011680Cucurbita pepo (Zucchini)cmocpeB862
CmoCh08G011680Cucurbita pepo (Zucchini)cmocpeB866
CmoCh08G011680Bottle gourd (USVL1VR-Ls)cmolsiB797
CmoCh08G011680Bottle gourd (USVL1VR-Ls)cmolsiB819
CmoCh08G011680Cucumber (Gy14) v2cgybcmoB421
CmoCh08G011680Cucumber (Gy14) v2cgybcmoB847
CmoCh08G011680Melon (DHL92) v3.6.1cmomedB903
CmoCh08G011680Melon (DHL92) v3.6.1cmomedB940
CmoCh08G011680Silver-seed gourdcarcmoB0826
CmoCh08G011680Silver-seed gourdcarcmoB1126
CmoCh08G011680Cucumber (Chinese Long) v3cmocucB1032
CmoCh08G011680Cucumber (Chinese Long) v3cmocucB1048
CmoCh08G011680Watermelon (97103) v2cmowmbB887
CmoCh08G011680Wax gourdcmowgoB1090
CmoCh08G011680Wax gourdcmowgoB1104
CmoCh08G011680Cucurbita moschata (Rifu)cmocmoB233
CmoCh08G011680Cucurbita moschata (Rifu)cmocmoB484
CmoCh08G011680Cucumber (Gy14) v1cgycmoB0720
CmoCh08G011680Cucumber (Gy14) v1cgycmoB1014
CmoCh08G011680Cucurbita maxima (Rimu)cmacmoB279
CmoCh08G011680Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G011680Cucurbita maxima (Rimu)cmacmoB837
CmoCh08G011680Wild cucumber (PI 183967)cmocpiB883
CmoCh08G011680Wild cucumber (PI 183967)cmocpiB894
CmoCh08G011680Cucumber (Chinese Long) v2cmocuB872
CmoCh08G011680Cucumber (Chinese Long) v2cmocuB881
CmoCh08G011680Melon (DHL92) v3.5.1cmomeB832
CmoCh08G011680Watermelon (Charleston Gray)cmowcgB792
CmoCh08G011680Watermelon (97103) v1cmowmB856