CmoCh08G008970 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGGTAAACACACCCTCTTTCTTTCTTTATCTATCAAGATTTTGATATTGATTTCTTGCTCCCTTTTTAGATACTGAGCTTCTCGAGCGCAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGGTAACCCATTTCTTTCCTTCTCTTTTTTTCTAATTTAGGGGATGACTGTGGGTTGGGTTTATAAGTAAGGAAGAGGGAGTCCCAGATTGATTTAAGGGATGATCATGGGTTGGGTTTATAAGTAACCAATACGTTTCTATTGGTATGAGGTGCTTTGGGTTGAGGTGTTTTGGGAAAGCCCAAAGCAAAATCACGTGAGCTTATGCTTAAAGTGGACAATAACATACTAATATAGAGGGTCGTTACTCCTAACATTAAGCTTGTTACAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGGTATGAGAAAATTTGGTGTAAGATTCGAAAGGGTTGGAACTGAAAAGAGGGTAATAATGTATGTGGTGGTGCAGAGAGGAGAATATGTGAATATCAATCCTCAAGAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTCAGTATAATTTGCGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGAACAGTGTTGATATTGTTTGAATGTTTTCTTCTGATTCGTTGATATCAAAGGGATTGCAAATATATGGTGTCAATTTTCTTGTACAGAAAGAATTAGATTAAGTCGACCCTTTACGAGCCGTATATAATTCTCTATTTTATGAATCAGGGAGAACTAATTATTACCAAAGAAAGCA ATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAGCTTCTCGAGCGCAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTCAGTATAATTTGCGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGAACAGTGTTGATATTGTTTGAATGTTTTCTTCTGATTCGTTGATATCAAAGGGATTGCAAATATATGGTGTCAATTTTCTTGTACAGAAAGAATTAGATTAAGTCGACCCTTTACGAGCCGTATATAATTCTCTATTTTATGAATCAGGGAGAACTAATTATTACCAAAGAAAGCA ATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAGCTTCTCGAGCGCAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTCAGTATAATTTGCGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGA
BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17 Identity = 76/245 (31.02%), Postives = 128/245 (52.24%), Query Frame = 1
BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12 Identity = 67/241 (27.80%), Postives = 120/241 (49.79%), Query Frame = 1
BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07 Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 1
BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.4e-06 Identity = 44/152 (28.95%), Postives = 83/152 (54.61%), Query Frame = 1
BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659128753|ref|XP_008464355.1| (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]) HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29 Identity = 80/237 (33.76%), Postives = 135/237 (56.96%), Query Frame = 1
BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659117591|ref|XP_008458682.1| (PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo]) HSP 1 Score: 110.2 bits (274), Expect = 5.3e-21 Identity = 62/208 (29.81%), Postives = 116/208 (55.77%), Query Frame = 1
BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659128729|ref|XP_008464344.1| (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]) HSP 1 Score: 108.2 bits (269), Expect = 2.0e-20 Identity = 76/245 (31.02%), Postives = 139/245 (56.73%), Query Frame = 1
BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|700190435|gb|KGN45639.1| (hypothetical protein Csa_6G002330 [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17 Identity = 76/245 (31.02%), Postives = 128/245 (52.24%), Query Frame = 1
BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 92.8 bits (229), Expect = 8.8e-16 Identity = 72/239 (30.13%), Postives = 125/239 (52.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |