CmoCh08G008970 (gene) Cucurbita moschata (Rifu)

NameCmoCh08G008970
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr08 : 5853006 .. 5854328 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGGTAAACACACCCTCTTTCTTTCTTTATCTATCAAGATTTTGATATTGATTTCTTGCTCCCTTTTTAGATACTGAGCTTCTCGAGCGCAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGGTAACCCATTTCTTTCCTTCTCTTTTTTTCTAATTTAGGGGATGACTGTGGGTTGGGTTTATAAGTAAGGAAGAGGGAGTCCCAGATTGATTTAAGGGATGATCATGGGTTGGGTTTATAAGTAACCAATACGTTTCTATTGGTATGAGGTGCTTTGGGTTGAGGTGTTTTGGGAAAGCCCAAAGCAAAATCACGTGAGCTTATGCTTAAAGTGGACAATAACATACTAATATAGAGGGTCGTTACTCCTAACATTAAGCTTGTTACAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGGTATGAGAAAATTTGGTGTAAGATTCGAAAGGGTTGGAACTGAAAAGAGGGTAATAATGTATGTGGTGGTGCAGAGAGGAGAATATGTGAATATCAATCCTCAAGAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTCAGTATAATTTGCGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGAACAGTGTTGATATTGTTTGAATGTTTTCTTCTGATTCGTTGATATCAAAGGGATTGCAAATATATGGTGTCAATTTTCTTGTACAGAAAGAATTAGATTAAGTCGACCCTTTACGAGCCGTATATAATTCTCTATTTTATGAATCAGGGAGAACTAATTATTACCAAAGAAAGCA

mRNA sequence

ATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAGCTTCTCGAGCGCAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTCAGTATAATTTGCGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGAACAGTGTTGATATTGTTTGAATGTTTTCTTCTGATTCGTTGATATCAAAGGGATTGCAAATATATGGTGTCAATTTTCTTGTACAGAAAGAATTAGATTAAGTCGACCCTTTACGAGCCGTATATAATTCTCTATTTTATGAATCAGGGAGAACTAATTATTACCAAAGAAAGCA

Coding sequence (CDS)

ATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAGCTTCTCGAGCGCAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTCAGTATAATTTGCGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGA
BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 76/245 (31.02%), Postives = 128/245 (52.24%), Query Frame = 1

Query: 2   IAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQN 61
           + P+  L+N    L+ +  + D+ +SP+  +L +  + P F+  LQ+T  FF  ++  + 
Sbjct: 8   VNPLSGLLNPTPVLSHLGEEVDIRVSPLKLSLMLPNFSPSFIAGLQMTHEFFNLYISDRT 67

Query: 62  LNARICLDSFHTTLISAHQLSAVSINL--VEVSRCL--LLAHENTDTELLERKMLELLPP 121
              R  L  F+T +    +L   S  L  V++ R L   L  EN + +  ER+ L+LL  
Sbjct: 68  YQFRFSLRKFYTFMYRM-ELQGFSSMLFTVDMKRLLSVYLTFENNNAKR-ERRRLKLLAY 127

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           + + D GDI++T  VSI  RDFRRI  +  S S    V +T + S++     +K+   ++
Sbjct: 128 DLDLD-GDIEYTTFVSIDSRDFRRIASELNSRS----VSVTFTNSRVNFFNKNKEITFSK 187

Query: 182 ERGEYVNINPQEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSFSIICVPFACCGCY 241
           E  + V    +EG E RF  ++HP  FF +L+ +S+RVWFL   +   I+ +P      +
Sbjct: 188 EENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSCIMILPLGLWQQF 245

Query: 242 LMYFP 243
            +YFP
Sbjct: 248 WVYFP 245

BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 67/241 (27.80%), Postives = 120/241 (49.79%), Query Frame = 1

Query: 7   PLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNARI 66
           P ++A+  L++    A+++ SP  F+L V  +        Q+ P FF  F   +  +++I
Sbjct: 9   PFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFSNRTHSSKI 68

Query: 67  CLDSFHTTL--ISAHQLSAVSINLVEVSRCLLLAHENTDTEL-LERKMLELLPPEHNDDL 126
            +     T+  +  +Q++++S  ++++   L+L   +   EL L RK       +  +D+
Sbjct: 69  PIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVK--EDM 128

Query: 127 GDIDFTNCVSIHLRDFRRIVHQELSVSYRDR-VCITTSESQIKLSVGDKKTILTRERGEY 186
           G+ID    VSI  + FRR+V        RD  V +TT+ S ++ S   K+ I  RE GE 
Sbjct: 129 GNIDLETFVSIDSQQFRRVV-----TGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGEC 188

Query: 187 VNINPQEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSF-SIICVPFACCGCYLMYF 243
           +     +G  T F   I+PT  F N+T +++RVW  K+ +   + I  P      +++YF
Sbjct: 189 IMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYF 242

BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07
Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 1

Query: 115 LPPEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTI 174
           L P   +D+G+ID+    SI     R I  +           +T + S++K SV DK+  
Sbjct: 36  LSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYD----ALVTLTNSEVKFSVNDKEIS 95

Query: 175 LTRERGEYVNINPQEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSFSIICVPFACC 234
           L +E  E +     +  E+RF   ++P   F +L +KS R+W  K+ NS+SII  P    
Sbjct: 96  LYKEVDECIIGGVADEEESRFFVYLNPKILFRDLANKSERIWMFKSPNSYSIIVAPIGLY 155

Query: 235 GCYLMYFP 243
             + +YFP
Sbjct: 156 AQFCVYFP 159

BLAST of CmoCh08G008970 vs. TrEMBL
Match: A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-06
Identity = 44/152 (28.95%), Postives = 83/152 (54.61%), Query Frame = 1

Query: 7   PLVNAVSPLTQIA-TQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNAR 66
           PL++A S   QI+   ADV  +P  F +  S   PRF+  LQL+P +F SF V  + +++
Sbjct: 11  PLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTSFSVDHDHSSK 70

Query: 67  ICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLE-RKMLELLPPEHNDD-L 126
           + L+SFH  ++     ++++I+L++ +  ++L  +   +E+      L L PP+  D+ +
Sbjct: 71  VSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSSEIQPLHHELALSPPQAEDNQI 130

Query: 127 G--DIDFTNCVSIHLRDFRRIVHQELSVSYRD 154
           G  ++D      +  +  RRI+ +EL +   D
Sbjct: 131 GQHELDEGKYFIVKSKALRRII-KELPIFQND 161

BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659128753|ref|XP_008464355.1| (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29
Identity = 80/237 (33.76%), Postives = 135/237 (56.96%), Query Frame = 1

Query: 7   PLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNARI 66
           PL +A S L QIA +AD+  +P+ F++  S   PRF+  LQ+T H F ++ V  +  +RI
Sbjct: 13  PLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINYKVDNDHTSRI 72

Query: 67  CLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPPEHNDDLGDI 126
            L+SFH  L+      +++I+L+   + L+L  E++         L L P +  +DLG++
Sbjct: 73  SLESFHDALLDGGASPSMTIHLLANIKQLILRFESSSHAPKVHHELSLTPSQE-EDLGEV 132

Query: 127 DFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTRERGEYVNIN 186
           D+    SI  +D RR++ + L + + D +C+T + SQ+K S+  K+ +LT+E  E + + 
Sbjct: 133 DYAKFFSIDSKDLRRVI-RNLPIFHGDSICVTATGSQVKFSIASKEIVLTKENEECMIVG 192

Query: 187 PQEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSFSIICVP-FACCGCYLMYFP 243
            +   ET+F  +++P  FF N T  + R+WF KTT S   + VP F     Y++ FP
Sbjct: 193 YEGEEETKFRINLNPMLFFLNFTHDALRIWFYKTTTSHGAMVVPAFGFFAQYVILFP 247

BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659117591|ref|XP_008458682.1| (PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 5.3e-21
Identity = 62/208 (29.81%), Postives = 116/208 (55.77%), Query Frame = 1

Query: 7   PLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNARI 66
           PL++A S L Q+A  ADV  +P+   + VS   P+F+  LQL+   F +F V  N ++++
Sbjct: 11  PLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKV 70

Query: 67  CLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPPEHNDDLGDI 126
            L  FH  ++     S+++I+L++ +  ++L  E    ++        L P   ++LG +
Sbjct: 71  SLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALSPPQAENLGQV 130

Query: 127 DFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTRERGEYVNIN 186
           ++ N  ++  R+ RRI+ +EL + ++D V +T + SQ+K S+  K+ ILT+E G    + 
Sbjct: 131 EYGNFFTVTSRELRRII-KELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVG 190

Query: 187 PQEGVETRFEFSIHPTSFFNNLTDKSRR 215
            +  VET+ +  + P  FF N T ++ +
Sbjct: 191 YEGEVETKLQVVLRPMMFFLNFTYRANK 217

BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659128729|ref|XP_008464344.1| (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-20
Identity = 76/245 (31.02%), Postives = 139/245 (56.73%), Query Frame = 1

Query: 7   PLVNAVSPLTQIA-TQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNAR 66
           PL++A S L QI+   AD+  +P  F +  S   PRF+  LQL+P +F +F V  + +++
Sbjct: 11  PLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSK 70

Query: 67  ICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLE-RKMLELLPPEHNDD-L 126
           + L+SFH  ++     ++++I+L++ +  ++L  +   +E+      L L PP+  D+ +
Sbjct: 71  VSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTLSPPQAEDNQI 130

Query: 127 G--DIDFTNCVSIHLRDFRRIVHQELSVSYRDR-VCITTSESQIKLSVGDKKTILTRERG 186
           G  ++D      +  +  RRI+ ++L +   D  + +  + S++K S+  K+ ILT   G
Sbjct: 131 GQHELDERKYFIVKSKALRRII-KDLPIFQNDSIISVDVTNSRVKFSIASKEIILT--EG 190

Query: 187 EYVNINP-QEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKT-TNSFSIICVP-FACCGCY 243
            +  I   +E VET+F+  + P  FF N T K+ RVWF KT  N+++++ VP +   G Y
Sbjct: 191 RHCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQY 250

BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|700190435|gb|KGN45639.1| (hypothetical protein Csa_6G002330 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 76/245 (31.02%), Postives = 128/245 (52.24%), Query Frame = 1

Query: 2   IAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQN 61
           + P+  L+N    L+ +  + D+ +SP+  +L +  + P F+  LQ+T  FF  ++  + 
Sbjct: 8   VNPLSGLLNPTPVLSHLGEEVDIRVSPLKLSLMLPNFSPSFIAGLQMTHEFFNLYISDRT 67

Query: 62  LNARICLDSFHTTLISAHQLSAVSINL--VEVSRCL--LLAHENTDTELLERKMLELLPP 121
              R  L  F+T +    +L   S  L  V++ R L   L  EN + +  ER+ L+LL  
Sbjct: 68  YQFRFSLRKFYTFMYRM-ELQGFSSMLFTVDMKRLLSVYLTFENNNAKR-ERRRLKLLAY 127

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           + + D GDI++T  VSI  RDFRRI  +  S S    V +T + S++     +K+   ++
Sbjct: 128 DLDLD-GDIEYTTFVSIDSRDFRRIASELNSRS----VSVTFTNSRVNFFNKNKEITFSK 187

Query: 182 ERGEYVNINPQEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSFSIICVPFACCGCY 241
           E  + V    +EG E RF  ++HP  FF +L+ +S+RVWFL   +   I+ +P      +
Sbjct: 188 EENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSCIMILPLGLWQQF 245

Query: 242 LMYFP 243
            +YFP
Sbjct: 248 WVYFP 245

BLAST of CmoCh08G008970 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 8.8e-16
Identity = 72/239 (30.13%), Postives = 125/239 (52.30%), Query Frame = 1

Query: 11  AVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLV-TQNLNARICLD 70
           A+ PL +    AD+  SP  F+L +S++FP  +T LQ+ P FF +FL   Q    +I + 
Sbjct: 14  ALLPLQRFNDTADLKCSPKMFSLIISRHFPLIITSLQILPPFFTNFLCQNQIFQFQIPIK 73

Query: 71  SFHTTLIS-AHQL-SAVSINLVEVSRCLLLAHENTDTELLERKMLEL----LPPEHNDDL 130
           SF+  + S  H+L S+++++L      + +A +  +  +++ +        L P   +D+
Sbjct: 74  SFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQEALYHAFPLSPSREEDV 133

Query: 131 GDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTRERGEYV 190
           G+ID+    SI    FR I    + +   D + +T + S++K SV DK  IL +ER E +
Sbjct: 134 GEIDYGIFFSIESLVFRFIA---IELDDFDAL-VTLTNSEVKFSVNDKDIILYKERDECI 193

Query: 191 NINPQEGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSFSIICVPFACCGCYLMYFP 243
               + G E+RF   ++P   F +L ++S R+W  K+  S+SI   P      + +YFP
Sbjct: 194 IGGVEIGEESRFFVYLNPKVLFRDLAEQSARIWMFKSPRSYSITVAPIGLYAQFCVYFP 248

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9W8_CUCSA1.5e-1731.02Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1[more]
A0A0A0K7E0_CUCSA1.4e-1227.80Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1[more]
A0A0A0KCY3_CUCSA1.4e-0731.25Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1[more]
A0A0A0K902_CUCSA4.4e-0628.95Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659128753|ref|XP_008464355.1|1.8e-2933.76PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo][more]
gi|659117591|ref|XP_008458682.1|5.3e-2129.81PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo][more]
gi|659128729|ref|XP_008464344.1|2.0e-2031.02PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo][more]
gi|700190435|gb|KGN45639.1|2.1e-1731.02hypothetical protein Csa_6G002330 [Cucumis sativus][more]
gi|659117581|ref|XP_008458677.1|8.8e-1630.13PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G008970.1CmoCh08G008970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.70.10.10coord: 12..215
score: 3.

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G008970CmoCh17G003960Cucurbita moschata (Rifu)cmocmoB321
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G008970Cucurbita moschata (Rifu)cmocmoB235
CmoCh08G008970Cucurbita moschata (Rifu)cmocmoB297
CmoCh08G008970Cucurbita moschata (Rifu)cmocmoB314
CmoCh08G008970Cucumber (Gy14) v1cgycmoB1013
CmoCh08G008970Cucurbita maxima (Rimu)cmacmoB281
CmoCh08G008970Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G008970Wild cucumber (PI 183967)cmocpiB891
CmoCh08G008970Wild cucumber (PI 183967)cmocpiB893
CmoCh08G008970Cucumber (Chinese Long) v2cmocuB880
CmoCh08G008970Melon (DHL92) v3.5.1cmomeB806
CmoCh08G008970Melon (DHL92) v3.5.1cmomeB835
CmoCh08G008970Watermelon (Charleston Gray)cmowcgB793
CmoCh08G008970Watermelon (Charleston Gray)cmowcgB796
CmoCh08G008970Watermelon (97103) v1cmowmB857
CmoCh08G008970Watermelon (97103) v1cmowmB859
CmoCh08G008970Watermelon (97103) v1cmowmB862
CmoCh08G008970Cucurbita pepo (Zucchini)cmocpeB833
CmoCh08G008970Bottle gourd (USVL1VR-Ls)cmolsiB804
CmoCh08G008970Cucumber (Gy14) v2cgybcmoB432
CmoCh08G008970Cucumber (Gy14) v2cgybcmoB846
CmoCh08G008970Melon (DHL92) v3.6.1cmomedB909
CmoCh08G008970Melon (DHL92) v3.6.1cmomedB944
CmoCh08G008970Silver-seed gourdcarcmoB0325
CmoCh08G008970Silver-seed gourdcarcmoB0326
CmoCh08G008970Silver-seed gourdcarcmoB0853
CmoCh08G008970Cucumber (Chinese Long) v3cmocucB1041
CmoCh08G008970Cucumber (Chinese Long) v3cmocucB1047
CmoCh08G008970Watermelon (97103) v2cmowmbB888
CmoCh08G008970Watermelon (97103) v2cmowmbB892
CmoCh08G008970Wax gourdcmowgoB1107
CmoCh08G008970Wax gourdcmowgoB1134