CmaCh08G009270 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGCGCCCGTGTTTCCCCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCATAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCATTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCCTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGGTAAACACACCCTCTTTCTTTCTTTATCTATCAAGATTTTGATATTGATTTCTTGCTCCCTTTTTAGATACTGAACTTCTCGAGCGCAAGATGCTCAAATTGCTGCCTCCAGAACACAACGATGATCTGGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCAAGATCGAGGTAACCCATTTCTTTCCTTCTTTTTTTTTTCTAATTTAGGGTTTTCTTATTTAGGGAATGACCGTGGGTCGAGTTTATAAGTAAGGAAGAGGGAGTTCTAAATTGACTAATTAAGGGGATGATCATGAATTGGGTTTATAAGTAGGGAATACTTTTCTATTGGTATGTGTTTTGGGAAAACCCAAAGCAAAACCACGGGAGCTTATACTTAAAGTGGACAATATCATATTAATGTGGAGGGTGTTACTCCTAACATTAAGCTTGTTGCAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGTGACAAAAAGACCATTCTTACTCGAGAGGTATGAGAAAATTTGGTGTAAGATTCGAGAGAGTTGGAACTGAAAAGAGGGTAATAATGTATGTGGTGGTGCAGAGAGGAGAATATGTGAATATCAATCCTCAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTAAGTATAATTTGTGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGA ATGATAGCGCCCGTGTTTCCCCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCATAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCATTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCCTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAACTTCTCGAGCGCAAGATGCTCAAATTGCTGCCTCCAGAACACAACGATGATCTGGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCAAGATCGAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGTGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTAAGTATAATTTGTGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGA ATGATAGCGCCCGTGTTTCCCCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCATAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCATTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCCTCGAGGTTTCCCGCTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAACTTCTCGAGCGCAAGATGCTCAAATTGCTGCCTCCAGAACACAACGATGATCTGGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCAAGATCGAGTTTGCATTACCACATCGGAGTCTCAAATCAAGCTATCCGTCGGTGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCTTGAAGACTACTAATTCCTTAAGTATAATTTGTGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGA MIAPVFPLVNAVSPLTQIATQADVDISPVSFTITVSQYFPRFLTVLQLTPHFFASFLVTQNLNARICLDSFHTTLISAHQLSAVSINLLEVSRCLLLAHENTDTELLERKMLKLLPPEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYQDRVCITTSESQIKLSVGDKKTILTRERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRRVWFLKTTNSLSIICVPFACCGCYLMYFPPCS
BLAST of CmaCh08G009270 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.7e-16 Identity = 74/245 (30.20%), Postives = 125/245 (51.02%), Query Frame = 1
BLAST of CmaCh08G009270 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.2e-12 Identity = 67/241 (27.80%), Postives = 121/241 (50.21%), Query Frame = 1
BLAST of CmaCh08G009270 vs. TrEMBL
Match: A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 46/152 (30.26%), Postives = 83/152 (54.61%), Query Frame = 1
BLAST of CmaCh08G009270 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06 Identity = 45/128 (35.16%), Postives = 63/128 (49.22%), Query Frame = 1
BLAST of CmaCh08G009270 vs. NCBI nr
Match: gi|659128753|ref|XP_008464355.1| (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29 Identity = 83/237 (35.02%), Postives = 136/237 (57.38%), Query Frame = 1
BLAST of CmaCh08G009270 vs. NCBI nr
Match: gi|659117591|ref|XP_008458682.1| (PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo]) HSP 1 Score: 113.2 bits (282), Expect = 6.3e-22 Identity = 66/208 (31.73%), Postives = 117/208 (56.25%), Query Frame = 1
BLAST of CmaCh08G009270 vs. NCBI nr
Match: gi|659128729|ref|XP_008464344.1| (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 9.1e-21 Identity = 76/243 (31.28%), Postives = 136/243 (55.97%), Query Frame = 1
BLAST of CmaCh08G009270 vs. NCBI nr
Match: gi|700190435|gb|KGN45639.1| (hypothetical protein Csa_6G002330 [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 6.7e-16 Identity = 74/245 (30.20%), Postives = 125/245 (51.02%), Query Frame = 1
BLAST of CmaCh08G009270 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14 Identity = 71/240 (29.58%), Postives = 123/240 (51.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |