Cp4.1LG12g03560 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g03560
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG12 : 2457642 .. 2472838 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATACGTATGTACTCATCATAACGAGAAAATATCTCAATCACGTGCCATACATAGTTTAAAATCATTTCATGTATCCATGTTTCAAGTTACACCCTCGTTAATTTAATACATATTTATTCATTTCATGTCATCTCATAATGTAGTGTGTAATTAAGGTGTTGTTACTCTTTGATAATGCATAGTTAAATTGTTTGTTCTTAGGGATGGGTATAGTGGTTGGGTTTTCTTCTTCACCTTCATCGTTGTGGGAGGAAGAAAGTAAAGACGCCGATAGCGGTGGAACGGATGAGTTGCTTGCTATTTTGGGATACAAGGTTCAGGCCTCGGACATGGAAGATGAGACTCTCATTCTGACTACGATCACGTAAAACCAAAAACTAACGAAGCATAGTCACCCCTCGAGATGTTAAAATGTCAAGTAGGGGAATTTTCGTCATTTGTCATACTACTTAAATTAATTGTGAACCGAAAAAATAATGGAGGCTCTTGAATCTAGTTTGGCTCCCTATGGCACCTGCTCCTAATCTACTCTCATCCTTGATTAAAATTAAACATATTGAGATGGTTGAGTTGGTCTAAGACCTAGATTAAGGTTCTGGTCAGTAGGGGCGTGGGTTAAAATTCCACTCCTAGTAATGTTTTCATCACTTTCATCAGATTAAGGCCTCGAACATGGAAAATGTCAGGTAGCGGCATTTTCATCATTTACCATACTACTTAAAATCAACAAAAATCTAGTATTTTTCTCTGTGGCACCTTCTCTAGATCTGCTCTCATCCTTGATTGCAATTTACATGTTGTGATGGCTGAGTTGGTCTAAGGTGCCAGATAAACCTTTTGGTCCGAAAGAGTGAGGGTTCAAATCCCACTCTCAACACAATATTTTTTAATCACTTTCATCATTGTGGGAGAAAGAAAGTAAGGGCCACAATATTTTTTAATCACTTTCATCATTGTGGGAGAAAGAAAGTAAGGGCTTGCCTCGAACATGGAACATGTTAGGTACCGTCATTTACCATACTACTTAAATCAACCAAAATCTCTAGATCTCCTTTCATCCTTAATTTTATAATTTACATGTTGAGATGGTTGAGTTGGTCTAAGGTGCCAGATTAAGGTTCTAGAACAAAAGGGCGTGGGTTCAACTCCCACTTTCATGGTTTCATTTCCGAAGAGGTACAATTGGTGTGTTTTTTGTATTTTGGGACGTGCATAAGAAACATAAAGGCTCTCGACCCTAGTTTGGTCCTCAATGACACCTGCTCCAGATTTGCTCCCGACCTTGATTATGGATCGCATGTTGAGATGGCCGAGTTGGTCTAAGACGCTAGATTAAGGTTTTGGTCCGAAAGGGCGTGGGTTCAAATTCCACTCTCAACAATGTTGTCATCACTTTCATCATTGTATGATCCATAATAGAAGATATGGCTCCGTCATTGGGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCGTATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTATGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAAAGTATACATGTTGAGGTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAACAATGTATGACCCATAACATAGGTCTAATGGAAGATCTGGCTCCCTCATTGGACGGTTTTAAAATGTACAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCATCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCAAACCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTTAACACTATCATCATTGTATGACCCATAACTGAGGTCGAATGAATGAACATGGAAGATCTGGCTCCCTCATTGGGCGGTTTTAAAATGTCCAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTGTTCGTCAACCTCTCGAACCTAGTTTTGCTCTGTATGTTACCTTCTTGGGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCCATAACATAGGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTATGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCTATAACATATGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCTATAACATATGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCTATAACATATGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCCATAACATAGGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCATATTAAGGTTCTGGTCCAAAAGGGCGTGGGTTCAAATCCTACTCTCAATAATGTGTTATCACATTCATCATTGTATGACCCATAACATATGTCGAATGGAAGATCTGGCTCCCTCATTGTGTGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCATGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCCATAACATAGGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTATGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCAAACCTAGTTTTGCTCTCTAGGTTACCTTCTTTAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCTAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCCCATTCATCATTGTTTGACCCATAACATAGGTCGAATGGAAGATCTGGCTCCCTCATTGGACTGTTTTAAAATGTCCAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCTATAACATATGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTTAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCTATAACATATGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTTAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCCATAACATAGGTCGAATGGAAGATCTCGCTCCCTCATTGGGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTTAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTCATCACATTCATCATTGTATGACCTATAACATAGGTCGAATGGAAGATCTCGCTCCCTCATTGTGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATATCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTTAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTTAACACTATCATCATTGTATGACCCATAACTGAGGTCGAATGAATGAACATGGAAGATCTGGCTCCCTCATTGGGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCTAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACACAAATGTTGTCATCACTTTCATCATTGTATGACCCATAACATAGGTCGAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTAGGTTACCTTCTTCAAATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTTCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTTAACACTATCTTGTGTATGACCCATAATTGAGGTTGAATGAACATGGAAGATCTAGCTCCCTCATTGGACGGTTTTAAAATGTCCAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTTTATGTTACCTTCTTGAGATCTGCTCTATAGAATTTACATGTTGAGATGGCCGAGTTGGTCTAGGGCGCTAGATTAAGGTTTCTGTCCGAAAGGGCGTGAGTTCAAATCCCACTCTCAACAATGTTGTTAACATTATCATCATTGCATGACCCATAACAGAGGTCGAATTGAATGAACATAGAAGATCTGGCTTCCCTCATTTGGCGGTTTTGAAATGTCAAAAAGTAGGGGCATTTTGATCATATACCATATTTGGCGGTTTTGAAATGTCAAAAAGTAGGGGCATTTTGATCATATACCATTAATTGTCAACCTCTCGAACCTAGTTTTGCTCTCTATGTTACCTTCTTCGGATCTGCTCTCATCCTTGATTAGAATTTACATGTTGAGATGACCGAGTTGGTCTAAGGTGCAAGATTAAAGTTCTGGTCCGAAAAGGCGTGGGTTCAAATCCCACTCTCAACAATGTTGTTCATCACTTTCATTAGACTTTACATGTTGAGATGACCGAGTTGGTCTAAGGTGCAAGATTAAGGTTCTGGTCCGAAAGGGCGTGAGTTCAAATCCCACTCTCAAGAATATTGTCATCACTTGTCATCACTTTCATCATTGTATGACCCATAGCAGAGGTCGAATGGATGAACATGGAAGATGTGGCTCCCTCATTGTGCGGATGTCAAAAGTAGGGCATTTTGGTCATATACCATTAATTGTCAACCTCGCCAACCTAGTTTGCTCTCTATGTTACCTTGGGTGAACATGGAAGATGTGGCTCCCTCATTGTGCGGATGTCAAAAGTAGGGGCATTTTGGTCATATACCATTAATTGTCAACCTCTCCAACCTAGTTTGCTCTCTATGTTACCTTCTTTGGTTCTGTTCTCATCCTTAATTAGAATTTACATGTTGAGATTTACATGTTGAGATGGCCGAGTTGGTCTAAGGCGCCCTCAAAAAGAGCAGCGTGGGTTCAAATTCCACTCTCAACAATGTTGTCATCACTTTCATCATTGTATGACCCATAACATCGAATGAATGAACATGGAAGATCTGTCTCCCTCATTGGGCGGTTTTAAAATGTCAAAACTAGGGGCATTTTGGTCATATACCTTAATTGTAACCTAGTTTTGCTCTCTTTGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTGGAATTTGCATGTTTAGATGGCTAGTTTTGCTCTCTTTGTTACCTTCTTCAGATCTGCTCTCATCCTTGATTGGAATTTGCATGTTTAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCATGGGTTCAAATCCCACCTCACTCTCAACAATGTTGTCATCACTTCATCATTGTGTATGACCCATAATAGAGGTTGAATGAATGAACATGGAAGATTTGGCTCCCTCACTGGGCGGTTTTAAAATGTCAAAAGTAGGGGCATTTTCGTCATATACCATTAATTGTCTACCTCTCGAACCTAGTTTTGATCTCTATGTTACCTTCTTCAGATCTGCTATCATCCTTGATTGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTAGTTTGAGGTCTAAAAGGGCGTAGGTTCAAATCCTATTCTCAACAATGTTTTCATCGCTTTCATCATTATCGACGAAGAAACCTAGTTTTCTCTCATCCTTAGATTAGAATTTACATGTTGAGATGGCCTAGGTCTAAGGCGTCAAATTAAAGTTTTGGTCCGAAAGGGTGTGGGTTCAAATCCCAAATGTCCATACACGGTGATATGATCTCACACAGGTTTGGAGAGGGGAAGTAAGAGGGGAAGTATGAAATGCACGACGTTGGACCCAGGAAGTAAGAGGGGAAGTATGAAATGCACGACGTTGGACCCACAAGAGGTGGATTGTTAGATCTCTTATCGGTTGGAACACCGAATGTGCCAGTAAGGATGCTAGACCTTAGGCCATATCACAAAGATGTTGGACCCACAAGAGTGTTAGACCCTTAATTTGTGAGATCTGGAGGAGGGAAAAGAGCACACTAGACCTTAGGCCATATCACAAAGATGTTGGACCCACAAGAGTCACAAAGATGTTGGACCCACAAGAGTGTTAGACCCTTAATTTGTGGACCCACAAGAGTGTTAGACCCTTGTGAGATCCCACGTCGGTTGGAGAAGGGAAAAGAGCACGGAAAAGAGCACGTACAATACCATAAGTCACAATCAATTCACAATCGGACAACTTTCAAATTGTTGCATTAAAGCTTGAATGAAATTAATATAGTTGATTCATTCATAAGGGCGAGAGGGTAAGAGCTCTTTAGCCAATTCAATTAACAAAAACGCCATGTTCTTGGTCAGGCTTCACCACTTCGATCCTCTTATGGAAGCAACCTCCATACTGGCTCAAATTTCTCATGAAGCTGACCTGAAATTCTCGTCGTCGAAGTTCTCCCTAATTACCTCGTACCCTTCCCTTCGCTTCGTCGCAACATTTCAAATCTCGCACCGTTTCTTCGCCAACTATTTCGTCGATCGGAATCACAGTTCAAGGGTTTCCCTCCAATCCTTCTATAATGCCATGTACGCTGGTATAGTTTTTTCTTCAATGACCATTCATTTTCCAGAAACAACAAGCCGCATGGTCCTTCAATTCGAGTCTTCAAGTTAGTATATAACCAAAATCTTTGCCATTTCTTGATGAATCTTGGCTCCCACTTAATTGTTGATATCACTTTTAGATCATACGAGGATGCAAATGCATCGTGTGTTAAAATTATCACCTTCTCAAGAGGAGGAATTAGGCCAAATTCAACATGATCGATTTTTCTCTATCATTTCACAAGATTTTAGAGACATCGTAACAGGATTACCCTCGTTCCCAAATGATTCAAGTAATCACCAATTCTTCTTTTGGGTTACATATTTACATGCAAGAACTAAAATCTTCTCTATTTACCTCAGTTTTCGTTAGTCTAACGAGTTCACAAGTCAAGTTTTGTTGTGCTTCAGAAGAGAGAATTCTTACCAAAGAGGTATTGTTCACGGATCTCCACAATCATATGATATTTGTTTACTTTGAGTCTGAGGTCTTTGGAGACCTCGAACAGCCTCCCATTAATCGAGGCTTGACTTCTTTCTTTGAAACCCTCGAACAAAATACTTTCTTTGTTCGACACATGAGTCACTTTTGATTACACCTTCGAGGCTAGAATTCTTACCAAAGAGATATTGTTCATAAGATAATATCACAAGATTTTTAGGAATCACTGATCTCTACAATGATATGATTTTATTCACGTTGAGTCTGAGGCCTATGAAGCCCTTGATAGCCTCCCCTTAATCAAGAGTTTGAAGCCTATGGAACCCTCGAATAGTCTCCCCTTCATCGAGAATCTGATGCCTATGGAGCCCTCGAACAACCTCTCTTTCATCGAGAGTCTGAGGCCTATGGAGCCCTCGAACAGCCCCCCCTTAGTCGAGAGTCTGAGGCCTATAGAGCCCTCAAACAGTCTCCCCTTCATCGAGAGTCTGTTGCCTATGGAGCCCTCGAACAGTCTCCCCTTAATCGAGAGTCTGAGGCCTATGGAGCCCTCGAACAGCCTCCCTTTCATTGAGAGTCTGAGGCCTATGGAGCCCTCGAACAGTCTCCCTTAATCGAGAGTCTGAGGCCTATGATGCCCTCGAACAGCCCCCTCTTCATCGAGAATCTGAGGCCTATGAAGCCCTCGAACAGTCTCCCTCCATTGAAAATCTGAGGCCTATGGAGCCCTTGAACAACCTCCCCCTTAATCAAGGCTCGACTCCTTTCTTTGGAGCTTCTGAACAAAGTACACCGTTTGTTCGACACATGAGTCACTTTTGACATGGCTAAATTAAGGGCATGACTATGATACCATGTTAGGAATCACGGATCTCCACAATGGTATGATATTGTCCACTCTGAGAAATAGCTCTCATGGGTTTATTTTGGGCTTCCCAAAAAGCCTCATATCAATGGAGATGTATTCCCTAACTCATGATCGTTCCCTTAATTAGCCAACGTGACACAACATCCCAACCATCCTCAACAAACATAATTTAAATGAGTTCTTGATCGATGTTTTTCAGGGTGGACGATGCGTAATTGTAGGTTATGAAGGGCAAGCTGAAATTGTATTTCAAATCAATCTCAATCCCAAGTGGTTTTTCTTTAATTTGAGTTATGGAGCATATAGGATATGGTTTTACAAGACAATTGATTCTCGTTGTGTAATCTTTATCCCAGCCTTTGGATTGAATGCCCAATATGTGATCTACTTTTCCTAAATGCTCATATCAAAGGATGAAGAATGACATTCTCAATTATGAACAAAACTTACAAAAGTTCGTCGTACCTAATGGCTCGTTCGACAATCGTTTTGTGGACACGGTTTTGGCTGTTTTGAATTTTTTTCCAAGTCGATTTAAGAGACTTGGTATTGAAATGTGGTGTAACGACACATTTTTTGAGAAATTCGCGCCAAAGATTGCTACTAATTGAGGCAACATTTTAAACACGACATGATACTTTGAATCAATTGGAAAAGGAGATGTTGGAGAACATGTTTCAAAACATTATATTAAAACATGAACAAGAAAATCATTGAGTTAGAAATCAAGACTTTAGGTTCAATGACATTAAGTTCTTTCTAGCCCTTTTAAGCTCATTGAGTTCTAAACCCTACCCACTCCTATTTCATAAGGGTAAGTCAGTCCCTCGGTGTCTTAAAATGTCAAGTAGGGGCATTTTCGTCAATTATCATACTACTTAATTTGCTTATCAACCAACAATATAACGGAGGCTCTCTACTTTTGTTTGGCTCTCTATGGCACCTGCTCCAGATATGCTCTCATCCTTGATTAGCAATTACATGTTGAGATGACCAATTTGATCTAAGGTGTTAGATTAATGTATTCATCACATTTCCCAAAAGAGTTCAATTGGTGACGTTTTTTGTATTTTGAACGAGGCTCTCAACCCTAGTTTGGCTTTTTATGGCACGTGCTCCAGATCTGCTCTCACCCTTGATTAGTGTTGTGATGGTTGAGTTGGTCTAAGGTGCCAGATTAAGGTTTTGGTCTAAAAGGGGGTGGGTTTAAATTTCACTCTCAATAATGATGTTAGAATGGTCAAGTAGGACATTTTTGTCATTTATCATAATATACTTAATTGAATTGTCAATCGACAATATATCAGAGGCTCTCTATGGCACGTGCTCCAGATCTCAGCCTTGATTAGCAAATATATGTTGAGATGGCCGAGTTAGTCTAAGACGCCAGATTAAGTCCGAAAGGGAGTGGGATTTCTCCAGATCTGCTCTCAGTCTTAATTAGCAAATATATGCTGAGATGGCCGAGTTGGTCTAAGGCGTCTGGCCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGATGTTAGAATGGTCAAGTAGGGCAATTTTGTCATTTATCATAATATACTTAATTGAACTGTCAATCGACAATATATCAAAGGCTCTCTATGGTACATGCTTCTGATCTCAGTCTTGATTAGCAATTATATGTTGAGTCCTAAGTAGGGCCGGACAAAATAATTTGGCTCTCTATAGCCCGTCAGATTAAAGTTTTGGTCCGAAAGGGCCCACTCTTAACAATGTTTTCATCACATTTCCTAAAATACTCTATAGCCCACCAAATTAAAGTTTTGGTCTGAAAGGGCCCACTCTCAACAATGTTTTCATCACATTTCCTAAAAGAGTATAATGGGTGATGTTTTTGTCATAAATCACATTTAGAGTAACCCCATTTTAAGAAGGGCATAGCATACTTAGTAGTTGGGAAGCACATGAAGTTATATTGATGTTCAGTCGATGGATGTCATATTGTCCAATAAATGATCTATCCATTAACCTTCCTAAATGATGTTCAGTCTAATAGATGTCACATTGTTCTAAAAAAATTTATCATATAATGCTTCAACCCAAGATATCGGTCATTCAATGTTGTGGCTATGCAAACTAACGAAGTCCAAAGTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGAATGATCATAGGTTTATAAGTGAGGAATACTAACTCCATTGGGATGAGGCATTTTGGGGAAGCCCAAAGCAAAGCCATAAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACACAAAGAACATAAAAGCTAGTTCATCCCAAGTATGAGATACCCTATCTAGTAGATCCGTTAGAACTTGGTGAATAACTTTCAGAACCCGTTTAAGTTTGTGACAAGTAAAACACCCACTCGAAACTTTTAAGTCTTCCCAAAAGCTTAGATAACCAAGAGAAAAGTTTGTGGTAATGTGATGATAGCCTACAAGTAAGTTGCTTGTAGAGCACTCTACTCACCCATTCTATATTTTTTTAGGTGTCTGATGACTACCGATCAAGGTGGAGAACATTCGAGACCTACGCGGTGACAGAGAAATTCGTCTCGGGTGTCCATCTTTTATTGGTTTAAAATTGTGAATAGATTTTAAAAAAATAGGATTCTTGATTTGCTTTAAAAGCCATTTGTTTGATTTTTGAAGAATGCTAAAATTGAAAGGCTTTGAACATTCTCACATTACCACCACCATGTTCTTGGTCAAGCTTGAGGATGTTACTCCTCTTTCAGACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTTAACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCAGAATATTCAGTTGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAACTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGGTAATATCTTGATATCATTCTTGTTTCATCTTGATATCATTCTTCATTGATCTTGATATCATTCTTGGTTGATCATGATATCAATCTTGGAATATCAGCTTCTCCCAATGCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACATTATAAGAGAAGTATCTTCATTCCCAAATGATCCAAGTAATGAAACTCTTTGTTTTTGTTCATATTTACTTCAAAGAAAGTGGGGTTTGTGGTTTAATTGATAAAGTTGTCTGATTCTCACAGTTCGTGTTACTCTAACTCATTTACAAGTCAAATTCTCTGTTGCATCCAAGGAAATTGTTCTTACTAAACAGGTAACGTTCCCGAGTTATTTTTGGGTCAACTTTTTTTATTTCTCGAACGAACCCTTTTGGGACATTCGGTAGAAAAACACTTTGAAGTGGTTTTGTTCTCGGGTCATTTTCTATAGCTACTTTTTTCATTTCTGGAACGAGCTCTATTGGAACGTTCAAAAAAGTTCTCGTCGTTTTTTATCTTTTACTATATATTCGTTAGAAAGGAAACTATTTTTACTAGAGAGGTCACGAATGTTCATATTTCGTTCCCGAGTTATTTTTGGGTCTAACTTTTTTCATTTCTTGAACGAACCCTTTTGGGACGTTCAGTAGAAAAACACCTTGAAGTGGTTTTGTTCTCGGGTCATTTTCTATAGCGACTTTTTTCATTTCTCAAACGAGCTCTATTGGAACGTTCAAAAAAGTTTCCTTGTCGTTTTTTGATTTTTTACTATATTCATTAGAAAGGAAACTATTCTTACTAGAGAGGTCACGAATGTTCAAATTCGGTTTCCCGAGTTATTTTTGTATCAACTTTTTTTATTTCTCAAAGAAACTCTATTGGGACGTTCAATAGAAAAACACCTTGAAGTGGTTTTGTTCTCAGGTCCTTTTCTATAGCGACTTTTTTCATTTCTCGAATGAGCTCTATTGGAACGTTCAAAAAAGTTTCCTTGTCGTTTTTTATTTCTTACTATATTCACGGGAGATAATATCAACAAATGCATCCAAGGAAACTATTCTTACTAGAGAGGTCACGAATGTTCAAATTCCGTTTCCCGAGTTACTTTTGGGTCAACTTTTTTCATTTCTTAAACGAACCCTATTGGGACGTTCAATAGAAAAACACCTTGAAATGGTTTTGTTCTCGGGTCATTTTCTATAGCGATTTTTCATTTCTCGAACGAGCTCTATTGGAACGTTCAAAAAAGTTCCCTTATCGTTTTTGATTTCTTACTATATTCATTAGAAAGGAAACTATTCTTACTAGAGACGTCACGAATGTTCAAATTCCATTTCCCGAGTTATTTTTTGGTCAAGTTTTTTCATTTCTCAAACAAACCCTATTGGAACATTCAATAGAAAAAAAACCTCTCTCAGGTCATTTTCTATAGCGACTTTTTTCATTTCTCGAACGAGCTCTATTGGAGTGTTCAAAAAAGTGTCCTTTCTAATGAATAAGGAGATACATTTTTTTTTTGTTCTCGGGCCATTTTTTGGGTCATTTCTCGAAGGAGCTCTATTTGAACGTTCAAAAAAAGGTTGTTTAACGAGCTAATATCATTTCATTGATGTTGTGCAGGCTCGAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGGTTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGGTCTATTTTCCACATGATAGGGAAAATATTATATACACAAATGGAGTATCCTAGTCTATCATCAATCTTTTCTTTTTCTTATTTGCTAC

mRNA sequence

ATGTATACAATGCTAAAATTGAAAGGCTTTGAACATTCTCACATTACCACCACCATGTTCTTGGTCAAGCTTGAGGATGTTACTCCTCTTTCAGACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTTAACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCAGAATATTCAGTTGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAACTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGCTTCTCCCAATGCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACATTATAAGAGAAGCTCGAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGGTTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGGTCTATTTTCCACATGATAGGGAAAATATTATATACACAAATGGAGTATCCTAGTCTATCATCAATCTTTTCTTTTTCTTATTTGCTAC

Coding sequence (CDS)

ATGTATACAATGCTAAAATTGAAAGGCTTTGAACATTCTCACATTACCACCACCATGTTCTTGGTCAAGCTTGAGGATGTTACTCCTCTTTCAGACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTTAACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCAGAATATTCAGTTGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAACTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGCTTCTCCCAATGCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACATTATAAGAGAAGCTCGAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGGTTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGGTCTATTTTCCACATGATAGGGAAAATATTATATACACAAATGGAGTATCCTAG

Protein sequence

MYTMLKLKGFEHSHITTTMFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREARKIQIAGYEEGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS

Homology

[Close]

BLAST of Cp4.1LG12g03560 vs. TrEMBL
Match: A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.8e-16
Identity = 60/155 (38.71%), Postives = 93/155 (60.00%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQLSLE-ADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAE 78
           MFLVKL +  PL DA   F Q+S + ADVKFT + F +  S+ S RFI  L +  + F  
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 79  YSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELT 138
           +SVD +   ++SL +F  ++ DGGS++SMT  + +  ++++L F   +S   P  H EL 
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSSEIQP-LHHELA 120

Query: 139 LLP--SEEVDIG--EVESEKNFIIEAEDFRHIIRE 169
           L P  +E+  IG  E++  K FI++++  R II+E
Sbjct: 121 LSPPQAEDNQIGQHELDEGKYFIVKSKALRRIIKE 154

[Close]

BLAST of Cp4.1LG12g03560 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.3e-09
Identity = 69/248 (27.82%), Postives = 107/248 (43.15%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEY 78
           M   ++  ++ L +   + + L  E D++ +    SL + N S  FI  L +  E F  Y
Sbjct: 3   MLKFRVNPLSGLLNPTPVLSHLGEEVDIRVSPLKLSLMLPNFSPSFIAGLQMTHEFFNLY 62

Query: 79  SVDPNQCWRISLSTFQKSLW--DGGSYSSMTFLMHETRSRMV-LEFHNSASPNAPSWHRE 138
             D    +R SL  F   ++  +   +SSM F +   R   V L F N+   NA    R 
Sbjct: 63  ISDRTYQFRFSLRKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFENN---NAKRERRR 122

Query: 139 LTLLPSEEVDIGEVESEKNFIIEAEDFRHII----------------------------- 198
           L LL  +    G++E      I++ DFR I                              
Sbjct: 123 LKLLAYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEITFS 182

Query: 199 REARKIQIAGYEEGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFN 235
           +E  +  I G EEG+  +F I++HP++FFL LS QS+  WF    D S  I+ +P   + 
Sbjct: 183 KEENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFS-CIMILPLGLWQ 242

[Close]

BLAST of Cp4.1LG12g03560 vs. TrEMBL
Match: A0A0A0KCX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002305 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-08
Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 1


Query: 22  VKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNAS-IRFIIKLDIWDELFAEYSV 81
           +K++ +TPL DA+ L +Q+  EADV F   + S+T SN S + F I L I  + F EYS+
Sbjct: 1   MKVDKLTPLVDAMCLLSQVFNEADVIFAPTLISITASNPSFVAFTITLHIKKQWFTEYSI 60

Query: 82  DPNQCWRISLSTFQKSLWDGGSYSSMTF----LMHETRSRMVLEFHNSA 126
             ++ WRISL +  ++++ G + S MT     +     S MVL+F +S+
Sbjct: 61  HRHRSWRISLHSLLQAMYAGRNSSRMTIRLPPISSTNSSAMVLKFSSSS 109

[Close]

BLAST of Cp4.1LG12g03560 vs. TrEMBL
Match: A0A0A0LIE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-08
Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQ-LSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAE 78
           MF +K++++ P  DA  LF + ++ E  +KF+ + FS+        F   L +   LF E
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 79  YSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELT 138
           YSVD N   RISL  F+ +L +G SYSSM+  + E ++ ++ +F  S    +       +
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPSILITSRGSQITFS 120

Query: 139 LLPSEEVDIGE 149
            +P EE+ I E
Sbjct: 121 AVPREEIIIRE 131

[Close]

BLAST of Cp4.1LG12g03560 vs. TrEMBL
Match: A0A0A0KB76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002310 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07
Identity = 47/150 (31.33%), Postives = 79/150 (52.67%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQL-SLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAE 78
           MF +K++ + PL DA+ LF  + + +  +KF+ + FS+        F   L I + LFAE
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 79  YSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELT 138
           Y V  +   R+SL +   +L  G +YSS+   + E ++ + L F  S     P   +   
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPSRHSPVPMRRKMRF 120

Query: 139 LLPSEEVDIGEVESE-KNFIIEAEDFRHII 167
            +P E+   GE++ + K+F IE++ FR II
Sbjct: 121 EVPMEDWSAGEIDFDAKSFSIESDLFRDII 150

[Close]

BLAST of Cp4.1LG12g03560 vs. NCBI nr
Match: gi|659128753|ref|XP_008464355.1| (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 5.7e-31
Identity = 92/249 (36.95%), Postives = 133/249 (53.41%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEY 78
           MFLV+L+D  PL DA     Q++ EAD+KFT   FS+  SN S RF+  L +    F  Y
Sbjct: 3   MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINY 62

Query: 79  SVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTL 138
            VD +   RISL +F  +L DGG+  SMT  +     +++L F +S+  +AP  H EL+L
Sbjct: 63  KVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLILRFESSS--HAPKVHHELSL 122

Query: 139 LPSEEVDIGEVESEKNFIIEAEDFRHIIREAR----------------KIQIAGYE---- 198
            PS+E D+GEV+  K F I+++D R +IR                   K  IA  E    
Sbjct: 123 TPSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLT 182

Query: 199 -----------EGDTD-QFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFN 236
                      EG+ + +FRI+L+PM+FFL  ++ +   WF KT   SH  + +PA  F 
Sbjct: 183 KENEECMIVGYEGEEETKFRINLNPMLFFLNFTHDALRIWFYKTTT-SHGAMVVPAFGFF 242

[Close]

BLAST of Cp4.1LG12g03560 vs. NCBI nr
Match: gi|659117591|ref|XP_008458682.1| (PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo])

HSP 1 Score: 110.5 bits (275), Expect = 4.1e-21
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEY 78
           MFLV+LE   PL DA  L  Q++ +ADVKFT  M  + VSN S +F+  L +   LF  +
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 79  SVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTL 138
           SVD N+  ++SL  F  ++ DGGS+SSMT  + +T ++MVL F  + S + P  H EL L
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRF-ETPSHDVPPLHHELAL 120

Query: 139 LPSEEVDIGEVESEKNFIIEAEDFRHIIRE 169
            P +  ++G+VE    F + + + R II+E
Sbjct: 121 SPPQAENLGQVEYGNFFTVTSRELRRIIKE 149

[Close]

BLAST of Cp4.1LG12g03560 vs. NCBI nr
Match: gi|659128729|ref|XP_008464344.1| (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 2.3e-16
Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQLSLE-ADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAE 78
           MFLVKL++  PL DA     Q+S + AD+KFT + F +  S+ S RFI  L +  + F  
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 79  YSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELT 138
           +SVD +   ++SL +F  ++ DGGS++SMT  + +  ++M+L F   +S   P  H ELT
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQP-LHHELT 120

Query: 139 LLP--SEEVDIG--EVESEKNFIIEAEDFRHIIRE 169
           L P  +E+  IG  E++  K FI++++  R II++
Sbjct: 121 LSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKD 154

[Close]

BLAST of Cp4.1LG12g03560 vs. NCBI nr
Match: gi|700190704|gb|KGN45908.1| (hypothetical protein Csa_6G020220 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 4.0e-16
Identity = 60/155 (38.71%), Postives = 93/155 (60.00%), Query Frame = 1


Query: 19  MFLVKLEDVTPLSDAVFLFNQLSLE-ADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAE 78
           MFLVKL +  PL DA   F Q+S + ADVKFT + F +  S+ S RFI  L +  + F  
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 79  YSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELT 138
           +SVD +   ++SL +F  ++ DGGS++SMT  + +  ++++L F   +S   P  H EL 
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSSEIQP-LHHELA 120

Query: 139 LLP--SEEVDIG--EVESEKNFIIEAEDFRHIIRE 169
           L P  +E+  IG  E++  K FI++++  R II+E
Sbjct: 121 LSPPQAEDNQIGQHELDEGKYFIVKSKALRRIIKE 154

[Close]

BLAST of Cp4.1LG12g03560 vs. NCBI nr
Match: gi|659116796|ref|XP_008458264.1| (PREDICTED: uncharacterized protein LOC103497732 [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 53/155 (34.19%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 18  TMFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAE 77
           T+F V L +  PL+DA  LF+ +  EADVK +    S+  ++ S  F+  L IW+  F +
Sbjct: 3   TLFFVSLHNFAPLADAAALFSNIFYEADVKVSRTQLSMITADRSRWFVAVLHIWEPFFND 62

Query: 78  YSVDPNQCWRISLSTFQKSLWDG--GSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRE 137
           Y +D +   RISL TF   +        SSM   M +  + + LEF NS        +R 
Sbjct: 63  YYIDKDITSRISLPTFHCHMNRARKDHCSSMNIRMQKGHNYLFLEFKNSKK----DIYRR 122

Query: 138 LTLLPSEEVDI--GEVESEKNFIIEAEDFRHIIRE 169
           + L PS E D+   +++++  F I + DFR II E
Sbjct: 123 MFLSPSREEDLTQTQIDNQNFFSIHSSDFRRIITE 153

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g03560 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g03560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K902_CUCSA	2.8e-16	38.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1	[more]
A0A0A0K9W8_CUCSA	7.3e-09	27.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1	[more]
A0A0A0KCX9_CUCSA	2.1e-08	37.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002305 PE=4 SV=1	[more]
A0A0A0LIE0_CUCSA	4.8e-08	32.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1	[more]
A0A0A0KB76_CUCSA	1.4e-07	31.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002310 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g03560 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g03560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128753\|ref\|XP_008464355.1\|	5.7e-31	36.95	PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]	[more]
gi\|659117591\|ref\|XP_008458682.1\|	4.1e-21	41.33	PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo]	[more]
gi\|659128729\|ref\|XP_008464344.1\|	2.3e-16	38.06	PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]	[more]
gi\|700190704\|gb\|KGN45908.1\|	4.0e-16	38.71	hypothetical protein Csa_6G020220 [Cucumis sativus]	[more]
gi\|659116796\|ref\|XP_008458264.1\|	1.3e-11	34.19	PREDICTED: uncharacterized protein LOC103497732 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006275	regulation of DNA replication
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042575	DNA polymerase complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g03560.1	Cp4.1LG12g03560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 19..172 score: 1.3
None	No IPR available	unknown	SSF55979	DNA clamp	coord: 19..136 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g03560	CmaCh17G004140	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g03560	CmaCh08G009180	Cucurbita maxima (Rimu)	cmacpeB904
Cp4.1LG12g03560	CmoCh08G008970	Cucurbita moschata (Rifu)	cmocpeB840
Cp4.1LG12g03560	CmoCh17G003960	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g03560	Cla001208	Watermelon (97103) v1	cpewmB158
Cp4.1LG12g03560	Cla009198	Watermelon (97103) v1	cpewmB161
Cp4.1LG12g03560	Csa6G002290	Cucumber (Chinese Long) v2	cpecuB141
Cp4.1LG12g03560	ClCG06G004010	Watermelon (Charleston Gray)	cpewcgB144
Cp4.1LG12g03560	CSPI06G00270	Wild cucumber (PI 183967)	cpecpiB143
Cp4.1LG12g03560	Lsi09G015390	Bottle gourd (USVL1VR-Ls)	cpelsiB101
Cp4.1LG12g03560	MELO3C035205.2	Melon (DHL92) v3.6.1	cpemedB138
Cp4.1LG12g03560	Bhi12G001630	Wax gourd	cpewgoB0177
Cp4.1LG12g03560	CsGy6G000310	Cucumber (Gy14) v2	cgybcpeB721
Cp4.1LG12g03560	Carg05587	Silver-seed gourd	carcpeB0099

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g03560	Cp4.1LG17g03370	Cucurbita pepo (Zucchini)	cpecpeB159

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g03560	Cucumber (Chinese Long) v3	cpecucB0165
Cp4.1LG12g03560	Cucumber (Gy14) v1	cgycpeB0359
Cp4.1LG12g03560	Melon (DHL92) v3.5.1	cpemeB112