ClCG06G004010 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G004010
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr06 : 4594853 .. 4598820 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTATCAAGATTGACGACCTTGATCCTTTCTTGGATGCAACCACTCTATTCGCCGAAATTGTGAACGACGAAATCTGCCTGAAAATCTCACCGTCGACGTTTTCGATAATTTCTCGCTACCAGCACCCTCTTTTCTTTGCAATGATGATTATGCCGCCACCATTTTTCGCTGAGTATTCCGTTGATCGGAATCACAATTCAAAGATTTCCCTATCGGCCTTCCACAATGCTATGTTGGAAGGCCAAAGCTTTTGTTCTTCAATGACCATCCATGTTCATGAACAAGAAAATAATATACACCTTATATTTGAGCCTTCAAGTTAGTATACATATGCGCGATACCCTTTCTCCTCTGTTTCTTCTCTTCAAAAATGAATAATCTTGGTTCTCAATGGACATTCTTTTTTTGTGTTTTTGTTTTTTCTATTTTCTTCATTTTTGTCATTGCTTGATTCTTTTATGCATGCTCAGAATTTTTTTTTAGAAAAAGATACGATAGAATATGGGGTCACTAGGTAAATTTTCGGGTATTCGAAATCAATTTTCTTGCAACTTTTTTAATTAAAAGCCCATCATATCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAAACATCATTCAAATACTTATATACCTCAATCTTGCTTGCTTTAGAATTTCTTGTGTTAATGATTGTATTTTGAATTTCGTCACATTTTAATTCATTTTTGTACTTTTACTAAATCTAAAATTAAGTTCATGTTTTTAGTTTGTTGATTATTATTTTTCTAAAAAGAAAATGACTCCATTAGCATTCTCATAATAAATTTTAGGAAAATATATCAACCATTTTCTCTTAGATCTAAATTATTATTATTATTATTATCATTTTAATCCATTTTGGTAAAAAAAAAAAAAAAAAAAAATGTCAAAGGTCAATTCATATGCAAATTATGATAATTATTGCTATCATTATATGACTTTCTACTTTTATTTTAAGGGCCTTCTGCACTACCATTGCATCATGAATTGACATTCCTGCCTATGGAAGACTGGTCGCTTGGCGAAGTTACCTTATTAAGTGGAAAAATTTTATCCATTGAGTCAGAAATGTTTAGCAATATTTTGACAACATTTTCTGTGTACAATGAAGCTGATTCAAGTAATGCAATTCTTCTTCTCTCATTTTTCATAAATTTTACTTTAAACAAAAAAAAGTGGTGTATATATGATCTTGCTAAAATCTTCTTTCATTTCTCACAGTTTTGATTACTTTAGTGGGTACACAAGCCACCTTCTCTGTCATTCCATTTGATCACGAGATAACTGTTACTGAAGAGGTATGTTTTGTGAACTTTGTGCAAATTAATTATTTTAATTATTTTAAATGAAATATATATATACACACATATTATAGTTATGTGTAGATAAGGTTGAAAAGTTGTCAAATCACTAATCAAAACATAAGCTTAAGTTGATATGAGTTGTGGCGAATTTAATATTATATCAATACTCTATCACTTCTATACCTTCCATTGTGTGTTTGAAAATTTGTTTGAACGGAAAAAAAATGACTTTGCAAGAGTTAAAAAACATAAGATTTCTACCAAATTAAAGGGAAAAATATCTTTTTGGTCTATAAGTTTCAAAATGTTGATTTTTTTTTTTTTTGTTAAGTTTTGAGTTTGATATCAATTTAGTCCCCTAAGTTTTAAAATGTTACAATTTAACCTTGAAATATTTGAGTTTTGTTTCAATTAAATCTTTAGATTGACTTATACTTTTAATTTTGATTTTTTTACTGAATACTCACATTCAGTCTTTAGTATTAATGTATACTAATTAATTTAAAACAATTAAAACAACTCTAATTAACTAAGTTTCACAATTTTGTCATCACGATTAAAATTAATTCAAATTTTCGTATTATTTTTTAAAAATCTTAAAATCTAAGGGACAAATTGAAACAAAACTAAAAAATCCATCTTAGGGGAAACATTACAACATTTTGAAACCTTTGCACCAAGTGGGAACTAAACCCAAGATGTAGGGACCGAAAATGTAATTTTCGGTATGTTAGATCACCCGTCAATCCAAAAAGACTCTAATGTATTTTACTTGAATTTATTTATGTTGTGCAGAGTGGAGATTGTTTGGTATTTCTATGGGATACCGAAGTTGAAGTTCATATGCATATGCCTCTCCATCCATCCTCATTTTTCAGTAATTGTGGAATTCAAGCTCGAAGGGTATGGTTCTACGAAACAGGCGATTCTTGTACAATAATCTATTTTCCTTTTGATGTGTATGAGCATTTTATGATGATTTGTTTTCCCTTTGTAGATGAAAACTCGTCTCAAGATTAACTCACACAGTCACACTCACTAAAAAAATATATACATTTAATAGTCTTAGTTGGGATTTTGTGTGCTATATGATACAACTTCTCTTGGCCATTCAAGGAGTTCATAAACAATTAACATTTTGTAGAGAAGATTAGTAGTTGCACCATAACATCGCAAGTGATCCTGAGTTGTACACCTTTTCAAACGTTGTCTCCTTTATAGAAATCCAACAAGTTTCGTCATTATCTTTGTCATCTCCTCAATATGTTTGGGTCGTGAAAATTAGTCAAAAGCTTATCTATTGTAAGTCGTGATCAACATCCATAAACATTAGATTATTCTATAGAGCAACATTAACTTAGTACTAAAAATATTAGGGGCAGTTGCAGAAATGGCAAATTTTTTTATTAAAATTAGGCCCATAGCCCATGTTTTATGATTTTGCAAAAATGACAAAATCCTTAACCTCAGCCCAATTTCATTGATGGATTAAATAGAAAATGCCGAAAATACCCCTACATATATTTGAATCACTTTGAGCTCTCTTCTTCTTCACGTAACGTATTCTCTATATTCACGTGTTTTATGTTGTTGAAAGTTGAAAAAACAGTTGCTTTATTTTGTGTGGGGAGAAAGGTTCTTTACCAGAAATGTTTAGACTTATTAGAATTCCTGGGAAAATAATATTTTGCAGTCAACTTTACGAAAAGGAACTTCATAAGTTGAAAGAAAAAAAGAAAAAAGGAAAAAAAATGATTCCGTCAACTTTATGGAAAATTACCGAACTCAAAAGAATTAATAAAATATGTATATATTTCAGTTTTTTTTTTCTTTTTTTTTTTTTTAAAAAAATAATGAATTGGATAAAAAAAAAATTTAGTCTATCTTTACAAATAGTTTCCATGCAACTTGTTTTTTGGAAATTGTTTTCAAAAGGACTCTATTTGAACGCTAAATCCATGTTTCAATGCATGGTTGATTTATTTTAGGAGTTTTTGATATTACAAGATTTGATTTGTATATGTTCCGAACTTTATGTCCATTTCTTTTGGCCATTAAATAATAGTTTTTCTTGAATAAGTAAAAGTTAGATCTAGAAAACAGCACCAAACTGCGGATAAATTCTTAATTAGGATGAGAATGAATGAAGGTTTTTGTTAAAAGAAGTGATTTGAAAAGGAGATTTGTGTTTAATGCCTTGTGTTTATGTGGAAATTTTAGACTTACATCTTAGAGCTAGGTTTTTAATTGGCAGGTATATTATTGAAACACCTAAATTTCTTAGCATTTTCACATTACCACCGCCATGTTCTCGATCAAGGTTGACAACCTTGATCCTTTTCTCGATGCAACCTCTCTATTCACTGAATTTATTAACGACGAGATCTGCGTGAAATTCTCGCCATCGACGTTCTCGATAATTGCTCGGTACCAATGCCCTCCCTTCTTTGCAATGATGTTCATGCCCCATCCATTATTCGCCGAGTATTCCGTTGATCGGAATCACATTTCCAGGATTTCCCTCAGATGCTTCCACAATGCTTTGTTGGAAGGCCAAAGCTATTCCTCTATGAGTATGCATCTCCAGGAACCCCAAAATAGCATACTCCTAAAATTTGAGCCTTCAAGTTAG

mRNA sequence

ATGTTCTCTATCAAGATTGACGACCTTGATCCTTTCTTGGATGCAACCACTCTATTCGCCGAAATTGTGAACGACGAAATCTGCCTGAAAATCTCACCGTCGACGTTTTCGATAATTTCTCGCTACCAGCACCCTCTTTTCTTTGCAATGATGATTATGCCGCCACCATTTTTCGCTGAGTATTCCGTTGATCGGAATCACAATTCAAAGATTTCCCTATCGGCCTTCCACAATGCTATGTTGGAAGGCCAAAGCTTTTGTTCTTCAATGACCATCCATGTTCATGAACAAGAAAATAATATACACCTTATATTTGAGCCTTCAAGGCCTTCTGCACTACCATTGCATCATGAATTGACATTCCTGCCTATGGAAGACTGGTCGCTTGGCGAAGTTACCTTATTAAGTGGAAAAATTTTATCCATTGAGTCAGAAATGTTTAGCAATATTTTGACAACATTTTCTGTGTACAATGAAGCTGATTCAATTTTGATTACTTTAGTGGGTACACAAGCCACCTTCTCTGTCATTCCATTTGATCACGAGATAACTGTTACTGAAGAGAGTGGAGATTGTTTGGTATTTCTATGGGATACCGAAGTTGAAGTTCATATGCATATGCCTCTCCATCCATCCTCATTTTTCAGTAATTGTGGAATTCAAGCTCGAAGGGTTGACAACCTTGATCCTTTTCTCGATGCAACCTCTCTATTCACTGAATTTATTAACGACGAGATCTGCGTGAAATTCTCGCCATCGACGTTCTCGATAATTGCTCGGTACCAATGCCCTCCCTTCTTTGCAATGATGTTCATGCCCCATCCATTATTCGCCGAGTATTCCGTTGATCGGAATCACATTTCCAGGATTTCCCTCAGATGCTTCCACAATGCTTTGTTGGAAGGCCAAAGCTATTCCTCTATGAGTATGCATCTCCAGGAACCCCAAAATAGCATACTCCTAAAATTTGAGCCTTCAAGTTAG

Coding sequence (CDS)

ATGTTCTCTATCAAGATTGACGACCTTGATCCTTTCTTGGATGCAACCACTCTATTCGCCGAAATTGTGAACGACGAAATCTGCCTGAAAATCTCACCGTCGACGTTTTCGATAATTTCTCGCTACCAGCACCCTCTTTTCTTTGCAATGATGATTATGCCGCCACCATTTTTCGCTGAGTATTCCGTTGATCGGAATCACAATTCAAAGATTTCCCTATCGGCCTTCCACAATGCTATGTTGGAAGGCCAAAGCTTTTGTTCTTCAATGACCATCCATGTTCATGAACAAGAAAATAATATACACCTTATATTTGAGCCTTCAAGGCCTTCTGCACTACCATTGCATCATGAATTGACATTCCTGCCTATGGAAGACTGGTCGCTTGGCGAAGTTACCTTATTAAGTGGAAAAATTTTATCCATTGAGTCAGAAATGTTTAGCAATATTTTGACAACATTTTCTGTGTACAATGAAGCTGATTCAATTTTGATTACTTTAGTGGGTACACAAGCCACCTTCTCTGTCATTCCATTTGATCACGAGATAACTGTTACTGAAGAGAGTGGAGATTGTTTGGTATTTCTATGGGATACCGAAGTTGAAGTTCATATGCATATGCCTCTCCATCCATCCTCATTTTTCAGTAATTGTGGAATTCAAGCTCGAAGGGTTGACAACCTTGATCCTTTTCTCGATGCAACCTCTCTATTCACTGAATTTATTAACGACGAGATCTGCGTGAAATTCTCGCCATCGACGTTCTCGATAATTGCTCGGTACCAATGCCCTCCCTTCTTTGCAATGATGTTCATGCCCCATCCATTATTCGCCGAGTATTCCGTTGATCGGAATCACATTTCCAGGATTTCCCTCAGATGCTTCCACAATGCTTTGTTGGAAGGCCAAAGCTATTCCTCTATGAGTATGCATCTCCAGGAACCCCAAAATAGCATACTCCTAAAATTTGAGCCTTCAAGTTAG

Protein sequence

MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAEYSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELTFLPMEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADSILITLVGTQATFSVIPFDHEITVTEESGDCLVFLWDTEVEVHMHMPLHPSSFFSNCGIQARRVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVDRNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFEPSS

Homology

[Close]

BLAST of ClCG06G004010 vs. TrEMBL
Match: A0A0A0LIE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.3e-47
Identity = 92/103 (89.32%), Postives = 99/103 (96.12%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           +VDNLDPFLDATSLFTEFINDEIC+KFSPSTFS+IARYQCP FFAM+FMPHPLF EYSVD
Sbjct: 5   KVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVEYSVD 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFEPS 327
           RNHISRISLRCF NALLEGQSYSSMS+HL+EPQN+IL KFEPS
Sbjct: 65  RNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPS 107

[Close]

BLAST of ClCG06G004010 vs. TrEMBL
Match: A0A0A0LIE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.9e-34
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MFSIK+D+LDPFLDAT+LF E +NDEICLK SPSTFS+I+RYQ P FFAM+ MP P F E
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPS 109
           YSVDRNH S+ISL  F NA+LEGQS+ SSM+IH+ E +N I   FEPS
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSY-SSMSIHLREPQNTILFKFEPS 107

HSP 2 Score: 181.8 bits (460), Expect = 1.3e-42
Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MFSIKID LDP LDA +LF +IVND+ICLK S STFSII+RYQHP FFAM+ +P P FAE
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELT 120
           Y V R+H  ++SL + H A+  GQ++ SS+ IH+ E++N I L FEPSR S +P+  ++ 
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTY-SSLRIHLQEEQNIICLAFEPSRHSPVPMRRKMR 120

Query: 121 F-LPMEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADS 163
           F +PMEDWS GE+     K  SIES++F +I+TTF  YNE D+
Sbjct: 121 FEVPMEDWSAGEID-FDAKSFSIESDLFRDIITTFYDYNEVDT 161

[Close]

BLAST of ClCG06G004010 vs. TrEMBL
Match: A0A0A0KB76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002310 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.6e-30
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           ++D LDP LDA SLFT+ +ND+IC+KFS STFSIIARYQ P FFAM+F+P PLFAEY V 
Sbjct: 5   KIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAEYFVG 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFEPS 327
           R+HI R+SL   H AL  GQ+YSS+ +HLQE QN I L FEPS
Sbjct: 65  RDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPS 107

HSP 2 Score: 122.5 bits (306), Expect = 9.7e-25
Identity = 65/164 (39.63%), Postives = 99/164 (60.37%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MF +K+ + DP LDAT+ FA+I  D+  +K +PS F IIS ++ P F A + + P +F  
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELT 120
           +SVD +H+SK+SL +FH+A+L+G SF +SMTIH+ ++ N I L F+       PLHHEL 
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSF-ASMTIHLLDKTNQIILRFDTPSSEIQPLHHELA 120

Query: 121 FLP--MEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADS 163
             P   ED  +G+  L  GK   ++S+    I+    ++    S
Sbjct: 121 LSPPQAEDNQIGQHELDEGKYFIVKSKALRRIIKELPIFQNDSS 163

[Close]

BLAST of ClCG06G004010 vs. TrEMBL
Match: A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16
Identity = 46/105 (43.81%), Postives = 71/105 (67.62%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           ++ N DP LDATS F +   D+  VKF+PS F II+ ++ P F A + +    F  +SVD
Sbjct: 5   KLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTSFSVD 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFE-PSS 328
            +H S++SL  FH+A+L+G S++SM++HL +  N I+L+F+ PSS
Sbjct: 65  HDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSS 109

HSP 2 Score: 77.4 bits (189), Expect = 3.6e-11
Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MF +K+ + +P LD+T   A   N+   +K +P    +I   + P F A + + P +F  
Sbjct: 1   MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTN 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFE 107
           +SVD  H+SK+SL +FH+AML+G  F S+M+IH+ ++ N + L F+
Sbjct: 61  FSVDHVHSSKVSLESFHDAMLDGGEF-STMSIHLLDKTNQMILRFD 105

[Close]

BLAST of ClCG06G004010 vs. TrEMBL
Match: A0A0A0K9W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002290 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-10
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           ++   +P LD+T     + N+   VKF+P    +I   + P F A + +    F  +SVD
Sbjct: 5   KLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVD 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFE-PSS 328
             H S++SL  FH+A+L+G  +S+MS+HL +  N ++L+F+ PSS
Sbjct: 65  HVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQMILRFDTPSS 109

[Close]

BLAST of ClCG06G004010 vs. NCBI nr
Match: gi|659131763|ref|XP_008465845.1| (PREDICTED: uncharacterized protein LOC103503439 [Cucumis melo])

HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49
Identity = 109/189 (57.67%), Postives = 137/189 (72.49%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MFSIKIDD+ PFL+ T LF E+ + EICLK   ST SII RYQ P+F  MM MP P FAE
Sbjct: 1   MFSIKIDDIYPFLETTILFVELTHKEICLKFLQSTLSIIVRYQSPIFIVMMSMPQPLFAE 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELT 120
           YSVDRNH S +SL   HNA+++G++F +++ I + E++N I L FE S PS LPL+ ELT
Sbjct: 61  YSVDRNHISIVSLPPLHNALVDGETF-ATLNISIEEEQNKIFLTFEASSPSTLPLNRELT 120

Query: 121 F-LPMEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADSILITLVGTQATFSVIPF 180
           F +PMEDWS G V    GKI SIESE+F++I+  FS +NEAD+ILIT  G++ TFSV PF
Sbjct: 121 FVVPMEDWSPGPVK-FDGKIFSIESELFTDIIQLFSAFNEADAILITAFGSKVTFSVPPF 180

Query: 181 DHEITVTEE 189
             E  +TEE
Sbjct: 181 -AETPLTEE 186

[Close]

BLAST of ClCG06G004010 vs. NCBI nr
Match: gi|659131763|ref|XP_008465845.1| (PREDICTED: uncharacterized protein LOC103503439 [Cucumis melo])

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-24
Identity = 57/104 (54.81%), Postives = 77/104 (74.04%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           ++D++ PFL+ T LF E  + EIC+KF  ST SII RYQ P F  MM MP PLFAEYSVD
Sbjct: 5   KIDDIYPFLETTILFVELTHKEICLKFLQSTLSIIVRYQSPIFIVMMSMPQPLFAEYSVD 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFEPSS 328
           RNHIS +SL   HNAL++G++++++++ ++E QN I L FE SS
Sbjct: 65  RNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASS 108

HSP 2 Score: 196.4 bits (498), Expect = 7.6e-47
Identity = 92/103 (89.32%), Postives = 99/103 (96.12%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           +VDNLDPFLDATSLFTEFINDEIC+KFSPSTFS+IARYQCP FFAM+FMPHPLF EYSVD
Sbjct: 5   KVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVEYSVD 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFEPS 327
           RNHISRISLRCF NALLEGQSYSSMS+HL+EPQN+IL KFEPS
Sbjct: 65  RNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPS 107

[Close]

BLAST of ClCG06G004010 vs. NCBI nr
Match: gi|700206404|gb|KGN61523.1| (hypothetical protein Csa_2G155090 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 5.6e-34
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MFSIK+D+LDPFLDAT+LF E +NDEICLK SPSTFS+I+RYQ P FFAM+ MP P F E
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPS 109
           YSVDRNH S+ISL  F NA+LEGQS+ SSM+IH+ E +N I   FEPS
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSY-SSMSIHLREPQNTILFKFEPS 107

HSP 2 Score: 181.8 bits (460), Expect = 1.9e-42
Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MFSIKID LDP LDA +LF +IVND+ICLK S STFSII+RYQHP FFAM+ +P P FAE
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELT 120
           Y V R+H  ++SL + H A+  GQ++ SS+ IH+ E++N I L FEPSR S +P+  ++ 
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTY-SSLRIHLQEEQNIICLAFEPSRHSPVPMRRKMR 120

Query: 121 F-LPMEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADS 163
           F +PMEDWS GE+     K  SIES++F +I+TTF  YNE D+
Sbjct: 121 FEVPMEDWSAGEID-FDAKSFSIESDLFRDIITTFYDYNEVDT 161

[Close]

BLAST of ClCG06G004010 vs. NCBI nr
Match: gi|700190433|gb|KGN45637.1| (hypothetical protein Csa_6G002310 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           ++D LDP LDA SLFT+ +ND+IC+KFS STFSIIARYQ P FFAM+F+P PLFAEY V 
Sbjct: 5   KIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAEYFVG 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFEPS 327
           R+HI R+SL   H AL  GQ+YSS+ +HLQE QN I L FEPS
Sbjct: 65  RDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPS 107

HSP 2 Score: 136.0 bits (341), Expect = 1.2e-28
Identity = 81/227 (35.68%), Postives = 126/227 (55.51%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MF +K+ + DP LDAT+  A+I  D   LK +PS F II+ ++ P F A + + P +F  
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELT 120
           +SVD +H+SK+SL +FH+A+L+G SF +SMTIH+ ++ N + L F+       PLHHELT
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSF-ASMTIHLLDKTNQMILRFDTPSSEIQPLHHELT 120

Query: 121 FLP--MEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADSILITLVGTQATFSVIP 180
             P   ED  +G+  L   K   ++S+    I+    ++     I + +  ++  FS+  
Sbjct: 121 LSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIA- 180

Query: 181 FDHEITVTEESGDCLVFLWDTEVEVHMHMPLHPSSFFSNCGIQARRV 226
              EI +T E   C +  ++ EVE    + L P  FF N   +A RV
Sbjct: 181 -SKEIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRV 223

[Close]

BLAST of ClCG06G004010 vs. NCBI nr
Match: gi|659128729|ref|XP_008464344.1| (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15
Identity = 44/105 (41.90%), Postives = 69/105 (65.71%), Query Frame = 1


Query: 224 RVDNLDPFLDATSLFTEFINDEICVKFSPSTFSIIARYQCPPFFAMMFMPHPLFAEYSVD 283
           ++ N DP LDATS   +   D   +KF+PS F IIA ++ P F A + +    F  +SVD
Sbjct: 5   KLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVD 64

Query: 284 RNHISRISLRCFHNALLEGQSYSSMSMHLQEPQNSILLKFE-PSS 328
            +H S++SL  FH+A+L+G S++SM++HL +  N ++L+F+ PSS
Sbjct: 65  NDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSS 109

HSP 2 Score: 131.3 bits (329), Expect = 3.0e-27
Identity = 77/224 (34.38%), Postives = 124/224 (55.36%), Query Frame = 1


Query: 1   MFSIKIDDLDPFLDATTLFAEIVNDEICLKISPSTFSIISRYQHPLFFAMMIMPPPFFAE 60
           MF ++++  +P +DAT+L A++  D   +K +P    II   + P F A + +    F  
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDAD-VKFTPLMLMIIVSNRSPQFVATLQLSRRLFTN 60

Query: 61  YSVDRNHNSKISLSAFHNAMLEGQSFCSSMTIHVHEQENNIHLIFEPSRPSALPLHHELT 120
           +SVD N +SK+SL  FH+AML+G SF SSMTIH+ +  N + L FE       PLHHEL 
Sbjct: 61  FSVDHNKSSKVSLQPFHDAMLDGGSF-SSMTIHLLDTTNQMVLRFETPSHDVPPLHHELA 120

Query: 121 FLPMEDWSLGEVTLLSGKILSIESEMFSNILTTFSVYNEADSILITLVGTQATFSVIPFD 180
             P +  +LG+V    G   ++ S     I+    ++++ D++ +T+ G+Q  FS+    
Sbjct: 121 LSPPQAENLGQVEY--GNFFTVTSRELRRIIKELPLFHQ-DTVSVTVTGSQVKFSI--QS 180

Query: 181 HEITVTEESGDCLVFLWDTEVEVHMHMPLHPSSFFSNCGIQARR 225
            EI +T+E G C +  ++ EVE  + + L P  FF N   +A +
Sbjct: 181 KEIILTKEGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANK 217

The following BLAST results are available for this feature:

BLAST of ClCG06G004010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIE0_CUCSA	5.3e-47	89.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1	[more]
A0A0A0LIE0_CUCSA	3.9e-34	69.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1	[more]
A0A0A0KB76_CUCSA	2.6e-30	66.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002310 PE=4 SV=1	[more]
A0A0A0K902_CUCSA	1.7e-16	43.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1	[more]
A0A0A0K9W4_CUCSA	1.8e-10	35.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002290 PE=4 SV=1	[more]

BLAST of ClCG06G004010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131763\|ref\|XP_008465845.1\|	1.6e-49	57.67	PREDICTED: uncharacterized protein LOC103503439 [Cucumis melo]	[more]
gi\|659131763\|ref\|XP_008465845.1\|	2.4e-24	54.81	PREDICTED: uncharacterized protein LOC103503439 [Cucumis melo]	[more]
gi\|700206404\|gb\|KGN61523.1\|	5.6e-34	69.44	hypothetical protein Csa_2G155090 [Cucumis sativus]	[more]
gi\|700190433\|gb\|KGN45637.1\|	3.8e-30	66.02	hypothetical protein Csa_6G002310 [Cucumis sativus]	[more]
gi\|659128729\|ref\|XP_008464344.1\|	5.9e-15	41.90	PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G004010.1	ClCG06G004010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 1..176 score: 5.
None	No IPR available	unknown	SSF55979	DNA clamp	coord: 242..324 score: 5.83E-5coord: 1..107 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G004010	Csa6G002290	Cucumber (Chinese Long) v2	cuwcgB480
ClCG06G004010	Cla97C06G113380	Watermelon (97103) v2	wcgwmbB273
ClCG06G004010	Cla97C06G113490	Watermelon (97103) v2	wcgwmbB274
ClCG06G004010	Bhi12G001630	Wax gourd	wcgwgoB504
ClCG06G004010	CSPI06G00270	Wild cucumber (PI 183967)	cpiwcgB507
ClCG06G004010	Lsi09G015420	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G004010	Cp4.1LG12g03560	Cucurbita pepo (Zucchini)	cpewcgB144
ClCG06G004010	CsGy6G000350	Cucumber (Gy14) v2	cgybwcgB443
ClCG06G004010	CsaV3_6G000350	Cucumber (Chinese Long) v3	cucwcgB502

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G004010	Silver-seed gourd	carwcgB0073
ClCG06G004010	Cucumber (Gy14) v1	cgywcgB228
ClCG06G004010	Cucurbita maxima (Rimu)	cmawcgB328
ClCG06G004010	Cucurbita maxima (Rimu)	cmawcgB800
ClCG06G004010	Cucurbita moschata (Rifu)	cmowcgB325
ClCG06G004010	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G004010	Watermelon (97103) v1	wcgwmB344
ClCG06G004010	Melon (DHL92) v3.6.1	medwcgB119