Cla97C06G113380 (gene) Watermelon (97103) v2

Overview
NameCla97C06G113380
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr06 : 4333205 .. 4333531 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTTATCAAGCTCCAGAATCTTGCTCCTCTTTTGAAGGCAACTTCTATATTCACTCAACTTGCTAACGATGAAGTCTGCCTGAAATTCTCGCCGTCGATGTTCTCGATAACTGCTCAGTTCCAGTCCCCTCCCTTCATTGCGATGATGCTTATGGATCAGCCATTTTTCGCCAACTATTCCATTGATCAGAATCAGATTTCAAAGATTTCCCTCCAAACCTTCCACAATGCTTTATCGCAAGGCCAAAGGTTTTGTACAATGACCATCCATCTACTGGAACCCCTAAATCGCATACTCCTTAGATTTGAGCCTTCAAGTTAG

mRNA sequence

ATGTTCTTTATCAAGCTCCAGAATCTTGCTCCTCTTTTGAAGGCAACTTCTATATTCACTCAACTTGCTAACGATGAAGTCTGCCTGAAATTCTCGCCGTCGATGTTCTCGATAACTGCTCAGTTCCAGTCCCCTCCCTTCATTGCGATGATGCTTATGGATCAGCCATTTTTCGCCAACTATTCCATTGATCAGAATCAGATTTCAAAGATTTCCCTCCAAACCTTCCACAATGCTTTATCGCAAGGCCAAAGGTTTTGTACAATGACCATCCATCTACTGGAACCCCTAAATCGCATACTCCTTAGATTTGAGCCTTCAAGTTAG

Coding sequence (CDS)

ATGTTCTTTATCAAGCTCCAGAATCTTGCTCCTCTTTTGAAGGCAACTTCTATATTCACTCAACTTGCTAACGATGAAGTCTGCCTGAAATTCTCGCCGTCGATGTTCTCGATAACTGCTCAGTTCCAGTCCCCTCCCTTCATTGCGATGATGCTTATGGATCAGCCATTTTTCGCCAACTATTCCATTGATCAGAATCAGATTTCAAAGATTTCCCTCCAAACCTTCCACAATGCTTTATCGCAAGGCCAAAGGTTTTGTACAATGACCATCCATCTACTGGAACCCCTAAATCGCATACTCCTTAGATTTGAGCCTTCAAGTTAG

Protein sequence

MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFANYSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPSS
Homology
[Close]
BLAST of Cla97C06G113380 vs. NCBI nr
Match: KGN61523.1 (hypothetical protein Csa_2G155090 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 5.6e-27
Identity = 62/107 (57.94%), Postives = 79/107 (73.83%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF IK+ NL P L ATS+FT+  NDE+CLKFSPS FS+ A++Q P F AM+ M  P F  
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPS 108
           YS+D+N IS+ISL+ F NAL +GQ + +M+IHL EP N IL +FEPS
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPS 107

[Close]
BLAST of Cla97C06G113380 vs. NCBI nr
Match: KGN45637.1 (hypothetical protein Csa_6G002310 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF IK+  L PLL A S+FT + ND++CLKFS S FSI A++Q P F AM+ + +P FA 
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPS 108
           Y + ++ I ++SL + H AL++GQ + ++ IHL E  N I L FEPS
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPS 107

[Close]
BLAST of Cla97C06G113380 vs. NCBI nr
Match: KGN45908.1 (hypothetical protein Csa_6G020220 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 51/109 (46.79%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF +KL N  PLL ATS F Q++ D+  +KF+PS F I +  +SP FIA + +   +F +
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFE-PSS 109
           +S+D +  SK+SL++FH+A+  G  F +MTIHLL+  N+I+LRF+ PSS
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSS 109

[Close]
BLAST of Cla97C06G113380 vs. NCBI nr
Match: XP_008464344.1 (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 3.6e-18
Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF +KL+N  PLL ATS   Q++ D   LKF+PS F I A  +SP FIA + +   +F  
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFE-PSS 109
           +S+D +  SK+SL++FH+A+  G  F +MTIHLL+  N+++LRF+ PSS
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSS 109

[Close]
BLAST of Cla97C06G113380 vs. NCBI nr
Match: XP_008458682.1 (PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 2.6e-16
Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF ++L+   PL+ ATS+  Q+A D   +KF+P M  I    +SP F+A + + +  F N
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTN 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPSS 109
           +S+D N+ SK+SLQ FH+A+  G  F +MTIHLL+  N+++LRFE  S
Sbjct: 61  FSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPS 107

[Close]
BLAST of Cla97C06G113380 vs. TrEMBL
Match: tr|A0A0A0LIE0|A0A0A0LIE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G155090 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.7e-27
Identity = 62/107 (57.94%), Postives = 79/107 (73.83%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF IK+ NL P L ATS+FT+  NDE+CLKFSPS FS+ A++Q P F AM+ M  P F  
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPS 108
           YS+D+N IS+ISL+ F NAL +GQ + +M+IHL EP N IL +FEPS
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPS 107

[Close]
BLAST of Cla97C06G113380 vs. TrEMBL
Match: tr|A0A0A0KB76|A0A0A0KB76_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002310 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF IK+  L PLL A S+FT + ND++CLKFS S FSI A++Q P F AM+ + +P FA 
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPS 108
           Y + ++ I ++SL + H AL++GQ + ++ IHL E  N I L FEPS
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPS 107

[Close]
BLAST of Cla97C06G113380 vs. TrEMBL
Match: tr|A0A0A0K902|A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020220 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.3e-19
Identity = 51/109 (46.79%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF +KL N  PLL ATS F Q++ D+  +KF+PS F I +  +SP FIA + +   +F +
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFE-PSS 109
           +S+D +  SK+SL++FH+A+  G  F +MTIHLL+  N+I+LRF+ PSS
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSS 109

[Close]
BLAST of Cla97C06G113380 vs. TrEMBL
Match: tr|A0A1S3CL88|A0A1S3CL88_CUCME (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF +KL+N  PLL ATS   Q++ D   LKF+PS F I A  +SP FIA + +   +F  
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFE-PSS 109
           +S+D +  SK+SL++FH+A+  G  F +MTIHLL+  N+++LRF+ PSS
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSS 109

[Close]
BLAST of Cla97C06G113380 vs. TrEMBL
Match: tr|A0A1S3C8J1|A0A1S3C8J1_CUCME (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MFFIKLQNLAPLLKATSIFTQLANDEVCLKFSPSMFSITAQFQSPPFIAMMLMDQPFFAN 60
           MF ++L+   PL+ ATS+  Q+A D   +KF+P M  I    +SP F+A + + +  F N
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTN 60

Query: 61  YSIDQNQISKISLQTFHNALSQGQRFCTMTIHLLEPLNRILLRFEPSS 109
           +S+D N+ SK+SLQ FH+A+  G  F +MTIHLL+  N+++LRFE  S
Sbjct: 61  FSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPS 107

The following BLAST results are available for this feature:
BLAST of Cla97C06G113380 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61523.15.6e-2757.94hypothetical protein Csa_2G155090 [Cucumis sativus][more]
KGN45637.11.9e-1948.60hypothetical protein Csa_6G002310 [Cucumis sativus][more]
KGN45908.11.2e-1846.79hypothetical protein Csa_6G020220 [Cucumis sativus][more]
XP_008464344.13.6e-1846.79PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo][more]
XP_008458682.12.6e-1643.52PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo][more]
BLAST of Cla97C06G113380 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIE0|A0A0A0LIE0_CUCSA3.7e-2757.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G155090 PE=4 SV=1[more]
tr|A0A0A0KB76|A0A0A0KB76_CUCSA1.3e-1948.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002310 PE=4 SV=1[more]
tr|A0A0A0K902|A0A0A0K902_CUCSA8.3e-1946.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020220 PE=4 SV=1[more]
tr|A0A1S3CL88|A0A1S3CL88_CUCME2.4e-1846.79uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=... [more]
tr|A0A1S3C8J1|A0A1S3C8J1_CUCME1.7e-1643.52uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... [more]
BLAST of Cla97C06G113380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C06G113380 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G113380.1Cla97C06G113380.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.70.10.10coord: 1..108
e-value: 2.9E-8
score: 35.3
NoneNo IPR availableSUPERFAMILYSSF55979DNA clampcoord: 2..105

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G113380ClCG06G004010Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G113380CsGy6G000350Cucumber (Gy14) v2cgybwmbB451
Cla97C06G113380CsaV3_6G000350Cucumber (Chinese Long) v3cucwmbB492
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G113380Cucumber (Gy14) v1cgywmbB227
Cla97C06G113380Cucurbita maxima (Rimu)cmawmbB376
Cla97C06G113380Cucurbita maxima (Rimu)cmawmbB377
Cla97C06G113380Cucurbita moschata (Rifu)cmowmbB361
Cla97C06G113380Wild cucumber (PI 183967)cpiwmbB499
Cla97C06G113380Cucumber (Chinese Long) v2cuwmbB472
Cla97C06G113380Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G113380Melon (DHL92) v3.6.1medwmbB118
Cla97C06G113380Watermelon (Charleston Gray)wcgwmbB274
Cla97C06G113380Watermelon (97103) v1wmwmbB406
Cla97C06G113380Watermelon (97103) v1wmwmbB409
Cla97C06G113380Silver-seed gourdcarwmbB0070