Carg05589 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05589
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Unknown protein
Location	Cucurbita_argyrosperma_scaffold_046 : 1470613 .. 1471644 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTTAATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGTCCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGTTAGTATACAAGAAACAACAATCTTGTTTCTTTTGGTTTCAAGAACATAATTTCCTTCAAATTCTTTCAAGAAAATCACTTAAATTTCTTCATTATTTCCCTTTTAGGCAATGACCCACCATTGCATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTATAAAAGAATTGCCTCTCTTCCACGATGATTTAGGTATCAATTCTCTCTCTCTCTCTTTTTTTTTTTTTCTTTCAAATTTGATTTTGTTTTTGATTTCGATACCTTGTTTATATGTCATAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGGTATTATATTGTTCATGTTCATCTCAAAAGCTTACAATTTGAAAGAAATTAAGCAAAATAAAAGCTTTAAAATTGCTTGATTTTGAACAGAGTGGAAATTGTAGGATCGTAGGTTATGAAGGAGAAGATGAAACTGAGCTGCATATCACTTTTCGTCCCATGATGTTTTTCCTTAATTTTACGTATAAAGCGAATAGGGTTTGGTTTTATAAGACAACTAATTCTCAAAGTGTAATTAGTGTCCCAGCTTTTGGGATGTATGGTCAATATGTGGTCTATTTTCCCAAATTATGA

mRNA sequence

ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTTAATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGTCCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGCAATGACCCACCATTGCATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTATAAAAGAATTGCCTCTCTTCCACGATGATTTAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGAGTGGAAATTGTAGGATCGTAGGTTATGAAGGAGAAGATGAAACTGAGCTGCATATCACTTTTCGTCCCATGATGTTTTTCCTTAATTTTACGTATAAAGCGAATAGGGTTTGGTTTTATAAGACAACTAATTCTCAAAGTGTAATTAGTGTCCCAGCTTTTGGGATGTATGGTCAATATGTGGTCTATTTTCCCAAATTATGA

Coding sequence (CDS)

ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTTAATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGTCCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGCAATGACCCACCATTGCATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTATAAAAGAATTGCCTCTCTTCCACGATGATTTAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGAGTGGAAATTGTAGGATCGTAGGTTATGAAGGAGAAGATGAAACTGAGCTGCATATCACTTTTCGTCCCATGATGTTTTTCCTTAATTTTACGTATAAAGCGAATAGGGTTTGGTTTTATAAGACAACTAATTCTCAAAGTGTAATTAGTGTCCCAGCTTTTGGGATGTATGGTCAATATGTGGTCTATTTTCCCAAATTATGA

Protein sequence

MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQYVVYFPKL

Homology

[Close]

BLAST of Carg05589 vs. NCBI nr
Match: XP_008458682.1 (PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80
Identity = 153/217 (70.51%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
           MFLV+L+QFEPL+DATSLL Q++KDADV+FT  ML +I S+ SP+FVATLQ+S RLFTN+
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
           SVDH  SSKVSL+ FHDAMLDGGSFSSM+IH+L++  QM+LR+E PS + PPLH EL LS
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120

Query: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
           PPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TK
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTK 180

Query: 181 ESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANR 218
           E G+C+IVGYEGE ET+L +  RPMMFFLNFTY+AN+
Sbjct: 181 EGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANK 217

[Close]

BLAST of Carg05589 vs. NCBI nr
Match: XP_008464344.1 (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 155/253 (61.26%), Postives = 197/253 (77.87%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKD-ADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTN 60
           MFLV+L+ F+PLLDATS L QIS D AD++FT     +IASH SPRF+ATLQ+S + FT 
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPL 120
           +SVD+ +SSKVSLESFHDA+LDGGSF+SM+IH+L+   QMILR++ PSS   PLH EL L
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTL 120

Query: 121 SPPQAE--SLGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASK 180
           SPPQAE   +GQ E    K+F V SK LR+IIK+LP+F +D ++ V  T++RVKFSIASK
Sbjct: 121 SPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASK 180

Query: 181 EITVTKESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVP 240
           EI +T E  +C+I G+E E ET+  I   PMMFFLNFTYKANRVWFYKT  N+ +++ VP
Sbjct: 181 EIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVP 240

Query: 241 AFGMYGQYVVYFP 247
           A+G++GQYV+YFP
Sbjct: 241 AYGIFGQYVIYFP 252

[Close]

BLAST of Carg05589 vs. NCBI nr
Match: XP_023000630.1 (uncharacterized protein LOC111494874 [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 4.7e-61
Identity = 124/249 (49.80%), Postives = 176/249 (70.68%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
           MFLV+L+ F PL+D TS L QI++++D+ FT   L L  S  SPRF+ATLQ+  + FT Y
Sbjct: 4   MFLVRLKNFRPLVDGTSRLAQIARESDIIFTPLSLKLTTSRPSPRFIATLQIFHQCFTVY 63

Query: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
           SV+  + S++SLES HDA+LD GS S+M+IH+LE+   M+LR+E P +++P L  +  L 
Sbjct: 64  SVNIDHCSRISLESLHDALLDCGSSSAMTIHLLENTNLMVLRFETP-NHEPQLRHDFVLL 123

Query: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
           PPQ +S+ ++EY K   ++S+ LR++IKELPLFH D V V  TS+RV+FSIAS+E+   K
Sbjct: 124 PPQEQSIEEIEYSKSLALDSRDLRQVIKELPLFHGDSVCVTVTSSRVRFSIASRELIFKK 183

Query: 181 ESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVPAFGMYG 240
           E G C I+G++G+  TE  I   PM+FFLN TY    VWF+KT TN+  V+  P F ++ 
Sbjct: 184 EKGRCEILGHDGDAVTEFRIVLYPMLFFLNLTYDVQTVWFHKTITNTHDVMIFPVFEIFA 243

Query: 241 QYVVYFPKL 249
           QYV+YFP++
Sbjct: 244 QYVIYFPRM 251

[Close]

BLAST of Carg05589 vs. NCBI nr
Match: XP_023006010.1 (uncharacterized protein LOC111498887 [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 1.4e-60
Identity = 127/245 (51.84%), Postives = 171/245 (69.80%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
           MFLV+L  F+PL +ATSLL QIS +AD++F++   SLI S+ S RFVAT Q+S R F NY
Sbjct: 1   MFLVRLHHFDPLREATSLLAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60

Query: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
           SVD  +SS+VSL+SF+DAM DG  FSSM+IH  E+  +M+L++E+ +     +H  L LS
Sbjct: 61  SVDRNHSSRVSLQSFYDAMYDGIFFSSMTIHFPETTSRMVLQFESSNHTKLKMHRVLKLS 120

Query: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
           P Q E LGQ+++ +FF++ S+  R II  LP F ++ + V+ TS+RVKF  AS+E  +TK
Sbjct: 121 PSQEEELGQIQHDRFFSIISQDFRDIITGLPSFPNNSIFVSLTSSRVKFCCASEERILTK 180

Query: 181 ESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQ 240
           E G C I+GYEGE E    I   P  FF N +Y A R+WFYKT +S+ VI VPAFG+  Q
Sbjct: 181 EGGRCAIIGYEGEAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFVPAFGLNAQ 240

Query: 241 YVVYF 246
           YV+YF
Sbjct: 241 YVIYF 245

[Close]

BLAST of Carg05589 vs. NCBI nr
Match: XP_022958857.1 (uncharacterized protein LOC111460011 [Cucurbita moschata])

HSP 1 Score: 233.4 bits (594), Expect = 8.2e-58
Identity = 122/245 (49.80%), Postives = 170/245 (69.39%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
           MFLV+L  F+PL++ATS+L QIS +AD++F++   SLI S+ S RFVAT Q+S R F NY
Sbjct: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSHRFVATFQISHRFFANY 60

Query: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
            VD  +SS+VSL+SF++AM  G  FSSM+IH  E+  +M+L++E+ +     +H  L LS
Sbjct: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120

Query: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
           P Q E LGQ+++ +FF++ S+  R II  LP F ++ + V+ TS+RVKF  AS+E  +TK
Sbjct: 121 PSQEEELGQIQHDRFFSIISQDFRDIITGLPSFPNNSIFVSLTSSRVKFCWASEERILTK 180

Query: 181 ESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQ 240
           E G C IVGYEG+ E    I   P  FF N +Y A R+WFYKT +S+ VI +PAFG+  Q
Sbjct: 181 EGGRCVIVGYEGQAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFIPAFGLNAQ 240

Query: 241 YVVYF 246
           YV+YF
Sbjct: 241 YVIYF 245

[Close]

BLAST of Carg05589 vs. TrEMBL
Match: tr|A0A1S3C8J1|A0A1S3C8J1_CUCME (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.0e-80
Identity = 153/217 (70.51%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
           MFLV+L+QFEPL+DATSLL Q++KDADV+FT  ML +I S+ SP+FVATLQ+S RLFTN+
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
           SVDH  SSKVSL+ FHDAMLDGGSFSSM+IH+L++  QM+LR+E PS + PPLH EL LS
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120

Query: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
           PPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TK
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTK 180

Query: 181 ESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANR 218
           E G+C+IVGYEGE ET+L +  RPMMFFLNFTY+AN+
Sbjct: 181 EGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANK 217

[Close]

BLAST of Carg05589 vs. TrEMBL
Match: tr|A0A1S3CL88|A0A1S3CL88_CUCME (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.8e-73
Identity = 155/253 (61.26%), Postives = 197/253 (77.87%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKD-ADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTN 60
           MFLV+L+ F+PLLDATS L QIS D AD++FT     +IASH SPRF+ATLQ+S + FT 
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPL 120
           +SVD+ +SSKVSLESFHDA+LDGGSF+SM+IH+L+   QMILR++ PSS   PLH EL L
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTL 120

Query: 121 SPPQAE--SLGQVEYG--KFFTVNSKVLRKIIKELPLF-HDDLVRVAATSTRVKFSIASK 180
           SPPQAE   +GQ E    K+F V SK LR+IIK+LP+F +D ++ V  T++RVKFSIASK
Sbjct: 121 SPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASK 180

Query: 181 EITVTKESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKT-TNSQSVISVP 240
           EI +T E  +C+I G+E E ET+  I   PMMFFLNFTYKANRVWFYKT  N+ +++ VP
Sbjct: 181 EIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVP 240

Query: 241 AFGMYGQYVVYFP 247
           A+G++GQYV+YFP
Sbjct: 241 AYGIFGQYVIYFP 252

[Close]

BLAST of Carg05589 vs. TrEMBL
Match: tr|A0A1S4E4N8|A0A1S4E4N8_CUCME (uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 103/181 (56.91%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
           MFLV+L+ F+PL DATS L QI+++AD++FT    S+IAS+ SPRFVA LQM+   F NY
Sbjct: 3   MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINY 62

Query: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
            VD+ ++S++SLESFHDA+LDGG+  SM+IH+L + +Q+ILR+E+ SS+ P +H EL L+
Sbjct: 63  KVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLILRFES-SSHAPKVHHELSLT 122

Query: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
           P Q E LG+V+Y KFF+++SK LR++I+ LP+FH D + V AT ++VKFSIASKEI +TK
Sbjct: 123 PSQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTK 182

Query: 181 E 182
           E
Sbjct: 183 E 182

[Close]

BLAST of Carg05589 vs. TrEMBL
Match: tr|A0A0A0K902|A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020220 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.9e-43
Identity = 100/161 (62.11%), Postives = 126/161 (78.26%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQIS-KDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTN 60
           MFLV+L  F+PLLDATS   QIS  DADV+FT     +I+SH SPRF+ATLQ+S + FT+
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 61  YSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPL 120
           +SVDH +SSKVSLESFHDA+LDGGSF+SM+IH+L+   Q+ILR++ PSS   PLH EL L
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSSEIQPLHHELAL 120

Query: 121 SPPQAE--SLGQ--VEYGKFFTVNSKVLRKIIKELPLFHDD 157
           SPPQAE   +GQ  ++ GK+F V SK LR+IIKELP+F +D
Sbjct: 121 SPPQAEDNQIGQHELDEGKYFIVKSKALRRIIKELPIFQND 161

[Close]

BLAST of Carg05589 vs. TrEMBL
Match: tr|A0A0A0K9W4|A0A0A0K9W4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002290 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.2e-26
Identity = 69/109 (63.30%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MFLVQLQQFEPLLDATSLLTQIS-KDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTN 60
           MFLV+L +FEPLLD+T  L   S  +A V+FT   L LI S+  P F+ATLQ+S R FTN
Sbjct: 1   MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTN 60

Query: 61  YSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSS 109
           +SVDH +SSKVSLESFHDAMLDGG FS+MSIH+L+   QMILR++ PSS
Sbjct: 61  FSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQMILRFDTPSS 109

The following BLAST results are available for this feature:

BLAST of Carg05589 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458682.1	4.5e-80	70.51	PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]	[more]
XP_008464344.1	1.2e-72	61.26	PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]	[more]
XP_023000630.1	4.7e-61	49.80	uncharacterized protein LOC111494874 [Cucurbita maxima]	[more]
XP_023006010.1	1.4e-60	51.84	uncharacterized protein LOC111498887 [Cucurbita maxima]	[more]
XP_022958857.1	8.2e-58	49.80	uncharacterized protein LOC111460011 [Cucurbita moschata]	[more]

BLAST of Carg05589 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg05589 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05589 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8J1\|A0A1S3C8J1_CUCME	3.0e-80	70.51	uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=...	[more]
tr\|A0A1S3CL88\|A0A1S3CL88_CUCME	7.8e-73	61.26	uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=...	[more]
tr\|A0A1S4E4N8\|A0A1S4E4N8_CUCME	1.3e-48	56.91	uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=...	[more]
tr\|A0A0A0K902\|A0A0A0K902_CUCSA	2.9e-43	62.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020220 PE=4 SV=1	[more]
tr\|A0A0A0K9W4\|A0A0A0K9W4_CUCSA	7.2e-26	63.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002290 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05589-RA	Carg05589-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 1..245 e-value: 1.4E-20 score: 75.7
None	No IPR available	SUPERFAMILY	SSF55979	DNA clamp	coord: 1..105
None	No IPR available	SUPERFAMILY	SSF55979	DNA clamp	coord: 130..235

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05589	CmoCh08G008970	Cucurbita moschata (Rifu)	carcmoB0105
Carg05589	Cla97C06G113350	Watermelon (97103) v2	carwmbB0070

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05589	Wax gourd	carwgoB0081
Carg05589	Silver-seed gourd	carcarB084
Carg05589	Cucumber (Gy14) v2	carcgybB0074
Carg05589	Cucumber (Gy14) v1	carcgyB0077
Carg05589	Cucurbita maxima (Rimu)	carcmaB0091
Carg05589	Cucurbita maxima (Rimu)	carcmaB0097
Carg05589	Cucurbita moschata (Rifu)	carcmoB0097
Carg05589	Cucurbita pepo (Zucchini)	carcpeB0099
Carg05589	Cucurbita pepo (Zucchini)	carcpeB0103
Carg05589	Wild cucumber (PI 183967)	carcpiB0077
Carg05589	Cucumber (Chinese Long) v2	carcuB0073
Carg05589	Cucumber (Chinese Long) v3	carcucB0081
Carg05589	Bottle gourd (USVL1VR-Ls)	carlsiB061
Carg05589	Melon (DHL92) v3.5.1	carmeB0067
Carg05589	Melon (DHL92) v3.6.1	carmedB0068
Carg05589	Watermelon (Charleston Gray)	carwcgB0073
Carg05589	Watermelon (97103) v1	carwmB0072
Carg05589	Watermelon (97103) v1	carwmB0073