CSPI06G00280 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G00280
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr6 : 251328 .. 252166 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGTAAGTTTAATTTTCTCATTATTATTTTTAATTGATTGCACTAATAATCTTGTAATTAATCCCTTCTCTTTTTTCTTCTTAATTTGATTATTTAGGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGGTGATATATTTGATTAATTTTCTTTATTATCTGATCATATTAATATTTTTTTGGTTAGTAATTAGTTTGTTGTTGTATTTCACAGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGTATGGTAAAGTATTTTTCACTCAAGAATCAAGTATCTATCTTTCTCTAAAAATAATTGATTGATGTGATGTAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGA

mRNA sequence

ATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGA

Coding sequence (CDS)

ATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGA

Homology

[Close]

BLAST of CSPI06G00280 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 6.0e-107
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 60
           MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL
Sbjct: 51  MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 110

Query: 61  PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 120
           PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK
Sbjct: 111 PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 170

Query: 121 EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP 180
           EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP
Sbjct: 171 EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP 230

Query: 181 VGLFARFVIYFPLG 195
           VGLFARFVIYFPLG
Sbjct: 231 VGLFARFVIYFPLG 244

[Close]

BLAST of CSPI06G00280 vs. TrEMBL
Match: A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.5e-60
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 1


Query: 38  LSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVT 97
           +S F+ K L+RL++KF SPR ELPLIRKF +R AV ED GN+D E FVSIDS QFR ++ 
Sbjct: 1   MSLFLFKNLERLLIKFYSPREELPLIRKFGVRYAVFEDFGNVDFEIFVSIDSLQFRHIIQ 60

Query: 98  GCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNI 157
            CRDY VRVT THSHVRF NE+KE IF +E GECI+EGVGKG   EFLIP+YPTHV+YNI
Sbjct: 61  ECRDYMVRVTPTHSHVRFCNEVKEIIFKKEEGECIIEGVGKGPAVEFLIPVYPTHVYYNI 120

Query: 158 TFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG 195
           TF+A+RVWLFKS DK GTFI+APVGLFA+F IYFPLG
Sbjct: 121 TFQAQRVWLFKSADKCGTFIIAPVGLFAQFAIYFPLG 157

[Close]

BLAST of CSPI06G00280 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.6e-20
Identity = 61/191 (31.94%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 3   QFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFV-LKLLDRLVLKFSSPRNELP 62
           +FFN + S+RT+  +  ++  +  + RM+    +S+ F V +K L  + L F +  N   
Sbjct: 57  EFFNLYISDRTYQFRFSLRKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFEN-NNAKR 116

Query: 63  LIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKE 122
             R+ ++     +  G+I+  TFVSIDS+ FRR+ +      V VT T+S V F N+ KE
Sbjct: 117 ERRRLKLLAYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKE 176

Query: 123 FIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPV 182
             F++E  +C++ GV +G+   F+I ++P   F +++ ++KRVW     D     ++ P+
Sbjct: 177 ITFSKEENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRD-FSCIMILPL 236

Query: 183 GLFARFVIYFP 193
           GL+ +F +YFP
Sbjct: 237 GLWQQFWVYFP 245

[Close]

BLAST of CSPI06G00280 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.2e-18
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 1


Query: 46  LDRLVLKFSSPR---NELPLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDY 105
           L+++ L+F +PR   ++  L   F +  + +ED+G ID   F SIDS   R + T   DY
Sbjct: 11  LNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDY 70

Query: 106 FVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAK 165
              VT T+S V+FS   KE    +E  ECI+ GV   + + F + + P  +F ++  +++
Sbjct: 71  DALVTLTNSEVKFSVNDKEISLYKEVDECIIGGVADEEESRFFVYLNPKILFRDLANKSE 130

Query: 166 RVWLFKSIDKLGTFIVAPVGLFARFVIYFP 193
           R+W+FKS +   + IVAP+GL+A+F +YFP
Sbjct: 131 RIWMFKSPNSY-SIIVAPIGLYAQFCVYFP 159

[Close]

BLAST of CSPI06G00280 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.9e-16
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 1


Query: 2   PQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELP 61
           P FF+++F     +S      +F   + +K++  TS SF + +      ++F  P   L 
Sbjct: 57  PPFFDHYFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLL 116

Query: 62  LIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYF-VRVTTTHSHVRFS-NEI 121
            +    + C +   +   DL  FVS+DSQQF  +++    +  V VT T   V FS + +
Sbjct: 117 EVTLRLVFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTM 176

Query: 122 KEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVA 181
           +E I + + G+CI+ G+      EF+I + P  VF +I  + KRVW FK  +     I A
Sbjct: 177 QETILSPQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITA 236

Query: 182 PVGLFARFVIYF 192
           P+GL AR V +F
Sbjct: 237 PLGLNARLVAFF 248

[Close]

BLAST of CSPI06G00280 vs. NCBI nr
Match: gi|700190431|gb|KGN45635.1| (hypothetical protein Csa_6G002300 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 8.6e-107
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 60
           MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL
Sbjct: 51  MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 110

Query: 61  PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 120
           PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK
Sbjct: 111 PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 170

Query: 121 EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP 180
           EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP
Sbjct: 171 EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP 230

Query: 181 VGLFARFVIYFPLG 195
           VGLFARFVIYFPLG
Sbjct: 231 VGLFARFVIYFPLG 244

[Close]

BLAST of CSPI06G00280 vs. NCBI nr
Match: gi|659114864|ref|XP_008457262.1| (PREDICTED: uncharacterized protein LOC103496987 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 2.0e-79
Identity = 143/194 (73.71%), Postives = 165/194 (85.05%), Query Frame = 1


Query: 1   MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 60
           MPQFFN+FFSN TH SKI +QPLF TIK MKEYQ +S+S FV K L+RL++KF SPR+EL
Sbjct: 53  MPQFFNHFFSNNTHISKIHLQPLFYTIKSMKEYQYSSMSVFVFKNLERLLIKFYSPRDEL 112

Query: 61  PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 120
           PLIRKF +R AV ED GN+D E FVSIDS QFR ++  CRDY VRVT THSHVRF NE+K
Sbjct: 113 PLIRKFEVRYAVYEDFGNVDFEIFVSIDSLQFRHIIQECRDYMVRVTPTHSHVRFCNEVK 172

Query: 121 EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP 180
           EFIFA+E GECI+EGVGKG   EFLIP+YPTHV+YNITF+A+RVWLFKS+DK GTFI+AP
Sbjct: 173 EFIFAKEAGECIIEGVGKGPAVEFLIPVYPTHVYYNITFQAQRVWLFKSVDKCGTFIIAP 232

Query: 181 VGLFARFVIYFPLG 195
           VGLFA+F IYFPLG
Sbjct: 233 VGLFAQFAIYFPLG 246

[Close]

BLAST of CSPI06G00280 vs. NCBI nr
Match: gi|778674138|ref|XP_011650141.1| (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 9.3e-77
Identity = 139/194 (71.65%), Postives = 161/194 (82.99%), Query Frame = 1


Query: 1   MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 60
           MPQFFNY+FSN TH SK+ +QPLF TIK MKEYQ +S+S F+ K L+RL++KF SPR EL
Sbjct: 66  MPQFFNYYFSNTTHISKVHLQPLFYTIKSMKEYQYSSMSLFLFKNLERLLIKFYSPREEL 125

Query: 61  PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 120
           PLIRKF +R AV ED GN+D E FVSIDS QFR ++  CRDY VRVT THSHVRF NE+K
Sbjct: 126 PLIRKFGVRYAVFEDFGNVDFEIFVSIDSLQFRHIIQECRDYMVRVTPTHSHVRFCNEVK 185

Query: 121 EFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAP 180
           E IF +E GECI+EGVGKG   EFLIP+YPTHV+YNITF+A+RVWLFKS DK GTFI+AP
Sbjct: 186 EIIFKKEEGECIIEGVGKGPAVEFLIPVYPTHVYYNITFQAQRVWLFKSADKCGTFIIAP 245

Query: 181 VGLFARFVIYFPLG 195
           VGLFA+F IYFPLG
Sbjct: 246 VGLFAQFAIYFPLG 259

[Close]

BLAST of CSPI06G00280 vs. NCBI nr
Match: gi|659117589|ref|XP_008458681.1| (PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67
Identity = 134/194 (69.07%), Postives = 156/194 (80.41%), Query Frame = 1


Query: 1   MPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNEL 60
           MPQFF++F SN+THSSK  IQPL+NT+KRMKE QITS SFF+L  LD LVLKF SPRNE 
Sbjct: 53  MPQFFSHFASNKTHSSKTLIQPLYNTLKRMKESQITSFSFFLLPPLDHLVLKFYSPRNES 112

Query: 61  PLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIK 120
           PLIRKF    A KE++ NID ETFVSIDS QFRR++  CRDYFV VT  HS V+FSNE++
Sbjct: 113 PLIRKFGKVNAAKENLRNIDFETFVSIDSLQFRRIIKKCRDYFVSVTPRHSDVKFSNEVR 172

Query: 121 EFIFAREG-GECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVA 180
           +FIF +EG GECI EG      TEFLIP YP HVF NI F++KRVWLFKS+DKLGTFI+A
Sbjct: 173 DFIFPKEGAGECIAEG-----KTEFLIPTYPFHVFNNIGFQSKRVWLFKSVDKLGTFIIA 232

Query: 181 PVGLFARFVIYFPL 194
           PVGLFA+F IY+P+
Sbjct: 233 PVGLFAQFAIYYPV 241

[Close]

BLAST of CSPI06G00280 vs. NCBI nr
Match: gi|700206403|gb|KGN61522.1| (hypothetical protein Csa_2G154090 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.6e-60
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 1


Query: 38  LSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVT 97
           +S F+ K L+RL++KF SPR ELPLIRKF +R AV ED GN+D E FVSIDS QFR ++ 
Sbjct: 1   MSLFLFKNLERLLIKFYSPREELPLIRKFGVRYAVFEDFGNVDFEIFVSIDSLQFRHIIQ 60

Query: 98  GCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNI 157
            CRDY VRVT THSHVRF NE+KE IF +E GECI+EGVGKG   EFLIP+YPTHV+YNI
Sbjct: 61  ECRDYMVRVTPTHSHVRFCNEVKEIIFKKEEGECIIEGVGKGPAVEFLIPVYPTHVYYNI 120

Query: 158 TFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG 195
           TF+A+RVWLFKS DK GTFI+APVGLFA+F IYFPLG
Sbjct: 121 TFQAQRVWLFKSADKCGTFIIAPVGLFAQFAIYFPLG 157

The following BLAST results are available for this feature:

BLAST of CSPI06G00280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G00280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7E0_CUCSA	6.0e-107	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1	[more]
A0A0A0LLD1_CUCSA	2.5e-60	71.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1	[more]
A0A0A0K9W8_CUCSA	5.6e-20	31.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1	[more]
A0A0A0KCY3_CUCSA	5.2e-18	36.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1	[more]
A0A0A0LIF2_CUCSA	4.9e-16	31.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1	[more]

BLAST of CSPI06G00280 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI06G00280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190431\|gb\|KGN45635.1\|	8.6e-107	100.00	hypothetical protein Csa_6G002300 [Cucumis sativus]	[more]
gi\|659114864\|ref\|XP_008457262.1\|	2.0e-79	73.71	PREDICTED: uncharacterized protein LOC103496987 [Cucumis melo]	[more]
gi\|778674138\|ref\|XP_011650141.1\|	9.3e-77	71.65	PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]	[more]
gi\|659117589\|ref\|XP_008458681.1\|	1.3e-67	69.07	PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo]	[more]
gi\|700206403\|gb\|KGN61522.1\|	3.6e-60	71.34	hypothetical protein Csa_2G154090 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G00280.1	CSPI06G00280.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G00280	Cla009197	Watermelon (97103) v1	cpiwmB565
CSPI06G00280	Csa6G002300	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G00280	Lsi09G015410	Bottle gourd (USVL1VR-Ls)	cpilsiB397
CSPI06G00280	MELO3C035208.2	Melon (DHL92) v3.6.1	cpimedB413
CSPI06G00280	CsaV3_6G000330	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G00280	Cla97C06G113460	Watermelon (97103) v2	cpiwmbB499
CSPI06G00280	Bhi12G001623	Wax gourd	cpiwgoB538
CSPI06G00280	CmoCh08G008970	Cucurbita moschata (Rifu)	cmocpiB903
CSPI06G00280	CmoCh17G003990	Cucurbita moschata (Rifu)	cmocpiB360
CSPI06G00280	Cp4.1LG12g03630	Cucurbita pepo (Zucchini)	cpecpiB143
CSPI06G00280	CsGy6G000340	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G00280	Carg05588	Silver-seed gourd	carcpiB0077

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G00280	Cucumber (Gy14) v1	cgycpiB198
CSPI06G00280	Cucurbita maxima (Rimu)	cmacpiB372
CSPI06G00280	Cucurbita maxima (Rimu)	cmacpiB925
CSPI06G00280	Melon (DHL92) v3.5.1	cpimeB418
CSPI06G00280	Watermelon (Charleston Gray)	cpiwcgB507
CSPI06G00280	Watermelon (97103) v1	cpiwmB558
CSPI06G00280	Silver-seed gourd	carcpiB0641