CsGy6G000340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G000340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr6 : 263225 .. 264340 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTTTACTCTTAATTTGGTCATTCTCTTCTTCCCCACGGCCAGGATTTACACTTAATTTCTTAGTATTACACAGAATGCTAATGTTTAGTCTTGAGAATTTGGACCCTTTTTTGGATGCAATATACATTCTATCTCGATTTGGTGAAAATGCTAACATTGAATGTTCCCCATCAATGTTTTCCCTAATAGTTCCTCATCATAACCTTGAATTGAATGTTGCCTTTCAAATGATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGTAAGTTTAATGTTCTCATTATTATTTTTAATTGATTGCACTAATAATCTTATAATTAATCCCTTCTCTTTTTTCTTCTTAATTTGATTATTTAGGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGGTGATATATTTGATTAATTTTCTTTATTATCTGATCTCTCATATTAATATTTTTTTGGTTAGTAATTAGTTTGTTGTTGTATTTCACAGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGTATGGTAAAGTATTTTTCACTCAAGAATCAAGTATCTATCTTTCTCTAAAAATAATTGATTGGTGTGATGTAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGACTTGTAGAAAAAAAAAATGTAATGCTTTTGAATCGATT

mRNA sequence

CAAAATTTTACTCTTAATTTGGTCATTCTCTTCTTCCCCACGGCCAGGATTTACACTTAATTTCTTAGTATTACACAGAATGCTAATGTTTAGTCTTGAGAATTTGGACCCTTTTTTGGATGCAATATACATTCTATCTCGATTTGGTGAAAATGCTAACATTGAATGTTCCCCATCAATGTTTTCCCTAATAGTTCCTCATCATAACCTTGAATTGAATGTTGCCTTTCAAATGATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGACTTGTAGAAAAAAAAAATGTAATGCTTTTGAATCGATT

Coding sequence (CDS)

ATGCTAATGTTTAGTCTTGAGAATTTGGACCCTTTTTTGGATGCAATATACATTCTATCTCGATTTGGTGAAAATGCTAACATTGAATGTTCCCCATCAATGTTTTCCCTAATAGTTCCTCATCATAACCTTGAATTGAATGTTGCCTTTCAAATGATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGA

Protein sequence

MLMFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG

Homology

[Close]

BLAST of CsGy6G000340 vs. NCBI nr
Match: KGN45635.1 (hypothetical protein Csa_6G002300 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 2.0e-136
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 3   MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS 62
           MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS
Sbjct: 1   MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS 60

Query: 63  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 122
           NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC
Sbjct: 61  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 120

Query: 123 AVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGE 182
           AVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGE
Sbjct: 121 AVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGE 180

Query: 183 CIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIY 242
           CIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIY
Sbjct: 181 CIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIY 240

Query: 243 FPLG 247
           FPLG
Sbjct: 241 FPLG 244

[Close]

BLAST of CsGy6G000340 vs. NCBI nr
Match: XP_011650141.1 (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91
Identity = 163/226 (72.12%), Postives = 189/226 (83.63%), Query Frame = 0


Query: 21  RFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFSNRTHSSKIPIQPLFNTIK 80
           RF E+ANIE SPSMFS+ +PHH +ELNVAFQMMPQFFNY+FSN TH SK+ +QPLF TIK
Sbjct: 34  RFREDANIEWSPSMFSITIPHHYIELNVAFQMMPQFFNYYFSNTTHISKVHLQPLFYTIK 93

Query: 81  RMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSID 140
            MKEYQ +S+S F+ K L+RL++KF SPR ELPLIRKF +R AV ED GN+D E FVSID
Sbjct: 94  SMKEYQYSSMSLFLFKNLERLLIKFYSPREELPLIRKFGVRYAVFEDFGNVDFEIFVSID 153

Query: 141 SQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPI 200
           S QFR ++  CRDY VRVT THSHVRF NE+KE IF +E GECI+EGVGKG   EFLIP+
Sbjct: 154 SLQFRHIIQECRDYMVRVTPTHSHVRFCNEVKEIIFKKEEGECIIEGVGKGPAVEFLIPV 213

Query: 201 YPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG 247
           YPTHV+YNITF+A+RVWLFKS DK GTFI+APVGLFA+F IYFPLG
Sbjct: 214 YPTHVYYNITFQAQRVWLFKSADKCGTFIIAPVGLFAQFAIYFPLG 259

[Close]

BLAST of CsGy6G000340 vs. NCBI nr
Match: XP_008458681.1 (PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 172/246 (69.92%), Postives = 200/246 (81.30%), Query Frame = 0


Query: 1   MLMFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYF 60
           MLMFSLEN+DP LDA+YILSR  EN  I+CSPSM S+IV HH L+LNV+FQMMPQFF++F
Sbjct: 1   MLMFSLENVDPLLDALYILSRCAENTIIQCSPSMVSIIVLHHELDLNVSFQMMPQFFSHF 60

Query: 61  FSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRM 120
            SN+THSSK  IQPL+NT+KRMKE QITS SFF+L  LD LVLKF SPRNE PLIRKF  
Sbjct: 61  ASNKTHSSKTLIQPLYNTLKRMKESQITSFSFFLLPPLDHLVLKFYSPRNESPLIRKFGK 120

Query: 121 RCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREG 180
             A KE++ NID ETFVSIDS QFRR++  CRDYFV VT  HS V+FSNE+++FIF +EG
Sbjct: 121 VNAAKENLRNIDFETFVSIDSLQFRRIIKKCRDYFVSVTPRHSDVKFSNEVRDFIFPKEG 180

Query: 181 -GECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARF 240
            GECI EG      TEFLIP YP HVF NI F++KRVWLFKS+DKLGTFI+APVGLFA+F
Sbjct: 181 AGECIAEG-----KTEFLIPTYPFHVFNNIGFQSKRVWLFKSVDKLGTFIIAPVGLFAQF 240

Query: 241 VIYFPL 246
            IY+P+
Sbjct: 241 AIYYPV 241

[Close]

BLAST of CsGy6G000340 vs. NCBI nr
Match: XP_023548335.1 (uncharacterized protein LOC111807003 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67
Identity = 133/246 (54.07%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 1   MLMFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYF 60
           ML+  ++  D  L+ IYIL+RF E+ N+ECSP +FS+ V HH+LELNVAFQMMP+FF  F
Sbjct: 1   MLLLKIDCADLLLEVIYILNRFAESGNVECSPDLFSIAVTHHSLELNVAFQMMPEFFTLF 60

Query: 61  FSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRM 120
           FS+++H SKI + PL++TI+RM+ + I   + +VL+  +RL LKF+ P NE+PL+R   M
Sbjct: 61  FSHKSHVSKILLSPLYSTIRRMQHFNIPLAALYVLRHPERLNLKFTPPGNEMPLLRNMSM 120

Query: 121 RCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREG 180
              +KE MG I+LETFVSIDS+ FRR+V   R Y V V  T S V FS EIK+ +  +E 
Sbjct: 121 TQTMKEHMGQINLETFVSIDSEVFRRMVIEFRGYVVYVHLTSSSVTFSIEIKDIVLEQEE 180

Query: 181 GECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFV 240
           GECI+ G  +G+ T+FLIP+ P HVFY IT+ +KRVWLFK+ID+  T IVAPVGL+A++ 
Sbjct: 181 GECIIGGT-EGELTDFLIPLCPWHVFYTITYHSKRVWLFKAIDR-STMIVAPVGLYAQYA 240

Query: 241 IYFPLG 247
           ++FPLG
Sbjct: 241 MHFPLG 244

[Close]

BLAST of CsGy6G000340 vs. NCBI nr
Match: XP_022958856.1 (uncharacterized protein LOC111460010 [Cucurbita moschata])

HSP 1 Score: 261.2 bits (666), Expect = 3.7e-66
Identity = 131/246 (53.25%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 1   MLMFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYF 60
           ML+  ++  D  L+ IYIL+RF E+AN+ECSP +FS+ V HH+LELNVAFQMMP+FF  F
Sbjct: 1   MLLLKIDCADFLLEVIYILNRFAESANVECSPDLFSIAVTHHSLELNVAFQMMPEFFTLF 60

Query: 61  FSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRM 120
           +S+++H SKI + PL+ TI+RM+ + I   + +VL+  +RL LKF+ P NE+PL+R   M
Sbjct: 61  YSHKSHVSKILLSPLYYTIRRMQYFNIPLAALYVLRRPERLNLKFTPPGNEMPLLRNMSM 120

Query: 121 RCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREG 180
              +K  MG I+LETFVSIDS+ FRR+V   R Y V V  T S+V FS EIK+ +  +E 
Sbjct: 121 TQTMKGHMGQINLETFVSIDSEVFRRMVIEFRGYVVYVHLTSSNVTFSIEIKDIVLEQEE 180

Query: 181 GECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFV 240
           GECI+ G  +G+ T+FLIP+ P HVFY IT+ ++RVWLFK+ID+  T IVAPVGL+A++ 
Sbjct: 181 GECIIGGT-EGELTDFLIPLCPWHVFYTITYHSRRVWLFKAIDR-STMIVAPVGLYAQYA 240

Query: 241 IYFPLG 247
           ++FPLG
Sbjct: 241 MHFPLG 244

[Close]

BLAST of CsGy6G000340 vs. TrEMBL
Match: tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 1.3e-136
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 3   MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS 62
           MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS
Sbjct: 1   MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS 60

Query: 63  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 122
           NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC
Sbjct: 61  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 120

Query: 123 AVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGE 182
           AVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGE
Sbjct: 121 AVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGE 180

Query: 183 CIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIY 242
           CIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIY
Sbjct: 181 CIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIY 240

Query: 243 FPLG 247
           FPLG
Sbjct: 241 FPLG 244

[Close]

BLAST of CsGy6G000340 vs. TrEMBL
Match: tr|A0A1S3C7Y9|A0A1S3C7Y9_CUCME (uncharacterized protein LOC103498009 OS=Cucumis melo OX=3656 GN=LOC103498009 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.0e-90
Identity = 172/246 (69.92%), Postives = 200/246 (81.30%), Query Frame = 0


Query: 1   MLMFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYF 60
           MLMFSLEN+DP LDA+YILSR  EN  I+CSPSM S+IV HH L+LNV+FQMMPQFF++F
Sbjct: 1   MLMFSLENVDPLLDALYILSRCAENTIIQCSPSMVSIIVLHHELDLNVSFQMMPQFFSHF 60

Query: 61  FSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRM 120
            SN+THSSK  IQPL+NT+KRMKE QITS SFF+L  LD LVLKF SPRNE PLIRKF  
Sbjct: 61  ASNKTHSSKTLIQPLYNTLKRMKESQITSFSFFLLPPLDHLVLKFYSPRNESPLIRKFGK 120

Query: 121 RCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREG 180
             A KE++ NID ETFVSIDS QFRR++  CRDYFV VT  HS V+FSNE+++FIF +EG
Sbjct: 121 VNAAKENLRNIDFETFVSIDSLQFRRIIKKCRDYFVSVTPRHSDVKFSNEVRDFIFPKEG 180

Query: 181 -GECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARF 240
            GECI EG      TEFLIP YP HVF NI F++KRVWLFKS+DKLGTFI+APVGLFA+F
Sbjct: 181 AGECIAEG-----KTEFLIPTYPFHVFNNIGFQSKRVWLFKSVDKLGTFIIAPVGLFAQF 240

Query: 241 VIYFPL 246
            IY+P+
Sbjct: 241 AIYYPV 241

[Close]

BLAST of CsGy6G000340 vs. TrEMBL
Match: tr|A0A1S3C5S9|A0A1S3C5S9_CUCME (uncharacterized protein LOC103496987 OS=Cucumis melo OX=3656 GN=LOC103496987 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-66
Identity = 121/165 (73.33%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 82  MKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSIDS 141
           MKEYQ +S+S FV K L+RL++KF SPR+ELPLIRKF +R AV ED GN+D E FVSIDS
Sbjct: 1   MKEYQYSSMSVFVFKNLERLLIKFYSPRDELPLIRKFEVRYAVYEDFGNVDFEIFVSIDS 60

Query: 142 QQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIY 201
            QFR ++  CRDY VRVT THSHVRF NE+KEFIFA+E GECI+EGVGKG   EFLIP+Y
Sbjct: 61  LQFRHIIQECRDYMVRVTPTHSHVRFCNEVKEFIFAKEAGECIIEGVGKGPAVEFLIPVY 120

Query: 202 PTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG 247
           PTHV+YNITF+A+RVWLFKS+DK GTFI+APVGLFA+F IYFPLG
Sbjct: 121 PTHVYYNITFQAQRVWLFKSVDKCGTFIIAPVGLFAQFAIYFPLG 165

[Close]

BLAST of CsGy6G000340 vs. TrEMBL
Match: tr|A0A0A0LLD1|A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G154090 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.9e-60
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 90  LSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVT 149
           +S F+ K L+RL++KF SPR ELPLIRKF +R AV ED GN+D E FVSIDS QFR ++ 
Sbjct: 1   MSLFLFKNLERLLIKFYSPREELPLIRKFGVRYAVFEDFGNVDFEIFVSIDSLQFRHIIQ 60

Query: 150 GCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNI 209
            CRDY VRVT THSHVRF NE+KE IF +E GECI+EGVGKG   EFLIP+YPTHV+YNI
Sbjct: 61  ECRDYMVRVTPTHSHVRFCNEVKEIIFKKEEGECIIEGVGKGPAVEFLIPVYPTHVYYNI 120

Query: 210 TFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG 247
           TF+A+RVWLFKS DK GTFI+APVGLFA+F IYFPLG
Sbjct: 121 TFQAQRVWLFKSADKCGTFIIAPVGLFAQFAIYFPLG 157

[Close]

BLAST of CsGy6G000340 vs. TrEMBL
Match: tr|A0A1S3C8E9|A0A1S3C8E9_CUCME (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 9.6e-31
Identity = 84/245 (34.29%), Postives = 140/245 (57.14%), Query Frame = 0


Query: 6   LENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFF-NYFFSNR 65
           LEN+  F  A+  L RF + A+++CSP MFSLI+  H   +  + Q++P FF N+   N+
Sbjct: 5   LENIHSFSKALLPLQRFNDTADLKCSPKMFSLIISRHFPLIITSLQILPPFFTNFLCQNQ 64

Query: 66  THSSKIPIQPLFNTIKRM--KEYQITSLSFFVLKLLDRLVLKFSSPR---NELPLIRKFR 125
               +IPI+  ++ +  M  + Y   +LS    + L ++ L+F +PR   ++  L   F 
Sbjct: 65  IFQFQIPIKSFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQEALYHAFP 124

Query: 126 MRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFARE 185
           +  + +ED+G ID   F SI+S  FR +     D+   VT T+S V+FS   K+ I  +E
Sbjct: 125 LSPSREEDVGEIDYGIFFSIESLVFRFIAIELDDFDALVTLTNSEVKFSVNDKDIILYKE 184

Query: 186 GGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARF 245
             ECI+ GV  G+ + F + + P  +F ++  ++ R+W+FKS  +  +  VAP+GL+A+F
Sbjct: 185 RDECIIGGVEIGEESRFFVYLNPKVLFRDLAEQSARIWMFKS-PRSYSITVAPIGLYAQF 244

The following BLAST results are available for this feature:

BLAST of CsGy6G000340 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45635.1	2.0e-136	100.00	hypothetical protein Csa_6G002300 [Cucumis sativus]	[more]
XP_011650141.1	3.3e-91	72.12	PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]	[more]
XP_008458681.1	1.1e-89	69.92	PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo]	[more]
XP_023548335.1	1.5e-67	54.07	uncharacterized protein LOC111807003 [Cucurbita pepo subsp. pepo]	[more]
XP_022958856.1	3.7e-66	53.25	uncharacterized protein LOC111460010 [Cucurbita moschata]	[more]

BLAST of CsGy6G000340 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy6G000340 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G000340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7E0\|A0A0A0K7E0_CUCSA	1.3e-136	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1	[more]
tr\|A0A1S3C7Y9\|A0A1S3C7Y9_CUCME	7.0e-90	69.92	uncharacterized protein LOC103498009 OS=Cucumis melo OX=3656 GN=LOC103498009 PE=...	[more]
tr\|A0A1S3C5S9\|A0A1S3C5S9_CUCME	5.4e-66	73.33	uncharacterized protein LOC103496987 OS=Cucumis melo OX=3656 GN=LOC103496987 PE=...	[more]
tr\|A0A0A0LLD1\|A0A0A0LLD1_CUCSA	9.9e-60	71.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G154090 PE=4 SV=1	[more]
tr\|A0A1S3C8E9\|A0A1S3C8E9_CUCME	9.6e-31	34.29	uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G000340.1	CsGy6G000340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 1..179 e-value: 1.1E-11 score: 46.5
None	No IPR available	SUPERFAMILY	SSF55979	DNA clamp	coord: 2..91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G000340	Cla001211	Watermelon (97103) v1	cgybwmB503
CsGy6G000340	Cla009197	Watermelon (97103) v1	cgybwmB511
CsGy6G000340	Csa6G002300	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G000340	CSPI06G00280	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G000340	CmoCh17G003990	Cucurbita moschata (Rifu)	cgybcmoB733
CsGy6G000340	Lsi09G015410	Bottle gourd (USVL1VR-Ls)	cgyblsiB360
CsGy6G000340	Cp4.1LG12g03630	Cucurbita pepo (Zucchini)	cgybcpeB721
CsGy6G000340	MELO3C035208.2	Melon (DHL92) v3.6.1	cgybmedB367
CsGy6G000340	Cla97C06G113460	Watermelon (97103) v2	cgybwmbB451
CsGy6G000340	Bhi12G001636	Wax gourd	cgybwgoB510
CsGy6G000340	Carg05590	Silver-seed gourd	carcgybB0074

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G000340	Cucurbita maxima (Rimu)	cgybcmaB752
CsGy6G000340	Cucurbita moschata (Rifu)	cgybcmoB854
CsGy6G000340	Cucurbita pepo (Zucchini)	cgybcpeB776
CsGy6G000340	Melon (DHL92) v3.5.1	cgybmeB366
CsGy6G000340	Watermelon (Charleston Gray)	cgybwcgB443
CsGy6G000340	Silver-seed gourd	carcgybB0607
CsGy6G000340	Cucumber (Chinese Long) v3	cgybcucB298