CsGy6G000340.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTTTACTCTTAATTTGGTCATTCTCTTCTTCCCCACGGCCAGGATTTACACTTAATTTCTTAGTATTACACAGAATGCTAATGTTTAGTCTTGAGAATTTGGACCCTTTTTTGGATGCAATATACATTCTATCTCGATTTGGTGAAAATGCTAACATTGAATGTTCCCCATCAATGTTTTCCCTAATAGTTCCTCATCATAACCTTGAATTGAATGTTGCCTTTCAAATGATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGTAAGTTTAATGTTCTCATTATTATTTTTAATTGATTGCACTAATAATCTTATAATTAATCCCTTCTCTTTTTTCTTCTTAATTTGATTATTTAGGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGGTGATATATTTGATTAATTTTCTTTATTATCTGATCTCTCATATTAATATTTTTTTGGTTAGTAATTAGTTTGTTGTTGTATTTCACAGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGTATGGTAAAGTATTTTTCACTCAAGAATCAAGTATCTATCTTTCTCTAAAAATAATTGATTGGTGTGATGTAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGACTTGTAGAAAAAAAAAATGTAATGCTTTTGAATCGATT CAAAATTTTACTCTTAATTTGGTCATTCTCTTCTTCCCCACGGCCAGGATTTACACTTAATTTCTTAGTATTACACAGAATGCTAATGTTTAGTCTTGAGAATTTGGACCCTTTTTTGGATGCAATATACATTCTATCTCGATTTGGTGAAAATGCTAACATTGAATGTTCCCCATCAATGTTTTCCCTAATAGTTCCTCATCATAACCTTGAATTGAATGTTGCCTTTCAAATGATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGACTTGTAGAAAAAAAAAATGTAATGCTTTTGAATCGATT ATGCTAATGTTTAGTCTTGAGAATTTGGACCCTTTTTTGGATGCAATATACATTCTATCTCGATTTGGTGAAAATGCTAACATTGAATGTTCCCCATCAATGTTTTCCCTAATAGTTCCTCATCATAACCTTGAATTGAATGTTGCCTTTCAAATGATGCCTCAATTTTTCAATTACTTCTTCTCCAACAGAACTCACTCTTCAAAAATCCCCATTCAACCATTATTCAATACCATCAAACGCATGAAAGAATACCAAATCACTTCACTCTCCTTCTTTGTTCTCAAACTTCTTGATCGCTTAGTCCTCAAATTTTCCTCTCCCAGGAATGAGCTACCCTTGATTCGTAAATTTAGAATGAGGTGTGCAGTAAAGGAGGATATGGGAAACATTGATTTGGAAACCTTTGTTTCCATTGATTCACAACAATTCAGACGTGTTGTAACTGGGTGTCGTGATTACTTTGTTAGGGTTACTACAACGCATTCACACGTCAGGTTCTCTAATGAAATCAAGGAGTTCATTTTTGCTAGAGAGGGAGGAGAATGCATAATGGAAGGTGTTGGGAAAGGGAAAGGGACTGAATTTCTGATCCCTATTTATCCAACTCATGTTTTCTATAATATCACTTTTCGAGCAAAAAGAGTATGGTTGTTCAAGTCTATTGATAAACTTGGTACTTTCATTGTTGCTCCTGTTGGACTCTTTGCTCGATTTGTCATCTATTTTCCTCTTGGATGA MLMFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDMGNIDLETFVSIDSQQFRRVVTGCRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYFPLG
BLAST of CsGy6G000340.1 vs. NCBI nr
Match: KGN45635.1 (hypothetical protein Csa_6G002300 [Cucumis sativus]) HSP 1 Score: 494.6 bits (1272), Expect = 2.0e-136 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. NCBI nr
Match: XP_011650141.1 (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]) HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91 Identity = 163/226 (72.12%), Postives = 189/226 (83.63%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. NCBI nr
Match: XP_008458681.1 (PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo]) HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89 Identity = 172/246 (69.92%), Postives = 200/246 (81.30%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. NCBI nr
Match: XP_023548335.1 (uncharacterized protein LOC111807003 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67 Identity = 133/246 (54.07%), Postives = 181/246 (73.58%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. NCBI nr
Match: XP_022958856.1 (uncharacterized protein LOC111460010 [Cucurbita moschata]) HSP 1 Score: 261.2 bits (666), Expect = 3.7e-66 Identity = 131/246 (53.25%), Postives = 181/246 (73.58%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. TrEMBL
Match: tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 1.3e-136 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. TrEMBL
Match: tr|A0A1S3C7Y9|A0A1S3C7Y9_CUCME (uncharacterized protein LOC103498009 OS=Cucumis melo OX=3656 GN=LOC103498009 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 7.0e-90 Identity = 172/246 (69.92%), Postives = 200/246 (81.30%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. TrEMBL
Match: tr|A0A1S3C5S9|A0A1S3C5S9_CUCME (uncharacterized protein LOC103496987 OS=Cucumis melo OX=3656 GN=LOC103496987 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 5.4e-66 Identity = 121/165 (73.33%), Postives = 141/165 (85.45%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. TrEMBL
Match: tr|A0A0A0LLD1|A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 9.9e-60 Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 0
BLAST of CsGy6G000340.1 vs. TrEMBL
Match: tr|A0A1S3C8E9|A0A1S3C8E9_CUCME (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 9.6e-31 Identity = 84/245 (34.29%), Postives = 140/245 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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