Carg05590 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCACCCCCTTCCAATCACTTCATTGCATCGCTCCAAATCTTGCCTGAATTCTTCACCTACTTTAACTCCGATGAGCCTCACCATTCAACAATTCCCCTCGAGCTGTTCTACATTACTATGCTCCGTATGGAAATCCGTGGCTTTACTTCAATGTACTTCACTCTTTTTCAACCACTAACCAAAGTCTTGCTCACATTTCAACGCTCAAGTTCGTACATATTTTCTTCTCTTCAACAAGAATCAAGAATCTTGTGTTTCTTTTGGTTTCAAGAACATATTATTTTTGGTGTTAGGTCATGAGCCCAAAGTGATGTTGTGTGAATTGGATTCGTTACCTTTGGAATTGGAGGAAATGGAGCAAATTGATTATGGAACTTTTGTGTCAATTGATTCACAAGACTTTAGACGTATTGTTCTTGAGTTAGATGTTCATTCCGGTGATATACTCTTCCTTTGAAATCTTTTACATTAAGTTCTTGAAAGAACATGTTTCCTTAAACTTTGTTGTCGTTTGTAATAGTTCATGTTTCCTTAACGGATTCACAAGTCAAGTTCGGTGCTTCAAGAAAGGAGATTGTTCTTACCAAAGAGGTATGATGTCTTTGTTGTAAGTTGCCGTGAATATGTACGGTCATAACTCTCATTTAGTTCATAATTCTCATTAAGTTCACAACTATTTTGGTTCATATTCTCAAGTATTTGGTTCGTGGATAAGAATTAGTATTGTTATGTCTATATAAATATTTGTCTAGCATTGTTTTGATGTGTGAAGTCATTGTCATTTGGTATTTGCCTCGAGGCAATTGGAAAGAATTTTAGAAAAGAGATTTTGTAGCGTGAGAGTGTGAGAGATGCACTTGTAAACACATTTATAGAGATTGGCTACCACTCGTGGATGTAGGAGAATTTCTTCACTCTAAACTACGTAAATCTTTGGGTCTCTTTGTTTAATTTATGTTTGTGGATATGAGTGCGATCGATCTTACTCCTGCTTCCACTTTCGCAACAACAATTGAGTATCATAACATTTTGGCTGTGACATTGTGATATGAGTGGCGTTAGGGCATAACAGTCTTTTGATGTTTACGAGGTTTATTGATTGAATTTGGTTGATGTTGTGTAGGAAAGACAGTGCATAATTGGAGGTCTTGCGGAGGGAGAGGGATTTGAATTTTCGATCACTCTCCGTCCGTTGGCGTTCTTTCATGAATTGAGCTATAAAGCAAAACGGGCATGGTTGTTCATGTCAATTAATTTCTCCACTATCATTGTTTTTCCCCTTGGAACTCGTACTCAGTGTTGGGTTTATTTCTCTCAATGA ATGGCCTCACCCCCTTCCAATCACTTCATTGCATCGCTCCAAATCTTGCCTGAATTCTTCACCTACTTTAACTCCGATGAGCCTCACCATTCAACAATTCCCCTCGAGCTGTTCTACATTACTATGCTCCGTATGGAAATCCGTGGCTTTACTTCAATGTACTTCACTCTTTTTCAACCACTAACCAAAGTCTTGCTCACATTTCAACGCTCAAGTCATGAGCCCAAAGTGATGTTGTGTGAATTGGATTCGTTACCTTTGGAATTGGAGGAAATGGAGCAAATTGATTATGGAACTTTTGTGTCAATTGATTCACAAGACTTTAGACGTATTGTTCTTGAGTTAGATGTTCATTCCGTTCATGTTTCCTTAACGGATTCACAAGTCAAGTTCGGTGCTTCAAGAAAGGAGATTGTTCTTACCAAAGAGGAAAGACAGTGCATAATTGGAGGTCTTGCGGAGGGAGAGGGATTTGAATTTTCGATCACTCTCCGTCCGTTGGCGTTCTTTCATGAATTGAGCTATAAAGCAAAACGGGCATGGTTGTTCATGTCAATTAATTTCTCCACTATCATTGTTTTTCCCCTTGGAACTCGTACTCAGTGTTGGGTTTATTTCTCTCAATGA ATGGCCTCACCCCCTTCCAATCACTTCATTGCATCGCTCCAAATCTTGCCTGAATTCTTCACCTACTTTAACTCCGATGAGCCTCACCATTCAACAATTCCCCTCGAGCTGTTCTACATTACTATGCTCCGTATGGAAATCCGTGGCTTTACTTCAATGTACTTCACTCTTTTTCAACCACTAACCAAAGTCTTGCTCACATTTCAACGCTCAAGTCATGAGCCCAAAGTGATGTTGTGTGAATTGGATTCGTTACCTTTGGAATTGGAGGAAATGGAGCAAATTGATTATGGAACTTTTGTGTCAATTGATTCACAAGACTTTAGACGTATTGTTCTTGAGTTAGATGTTCATTCCGTTCATGTTTCCTTAACGGATTCACAAGTCAAGTTCGGTGCTTCAAGAAAGGAGATTGTTCTTACCAAAGAGGAAAGACAGTGCATAATTGGAGGTCTTGCGGAGGGAGAGGGATTTGAATTTTCGATCACTCTCCGTCCGTTGGCGTTCTTTCATGAATTGAGCTATAAAGCAAAACGGGCATGGTTGTTCATGTCAATTAATTTCTCCACTATCATTGTTTTTCCCCTTGGAACTCGTACTCAGTGTTGGGTTTATTTCTCTCAATGA MASPPSNHFIASLQILPEFFTYFNSDEPHHSTIPLELFYITMLRMEIRGFTSMYFTLFQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEQIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTDSQVKFGASRKEIVLTKEERQCIIGGLAEGEGFEFSITLRPLAFFHELSYKAKRAWLFMSINFSTIIVFPLGTRTQCWVYFSQ
BLAST of Carg05590 vs. NCBI nr
Match: XP_022958854.1 (uncharacterized protein LOC111460008 [Cucurbita moschata]) HSP 1 Score: 409.8 bits (1052), Expect = 5.4e-111 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of Carg05590 vs. NCBI nr
Match: XP_023006012.1 (uncharacterized protein LOC111498889 [Cucurbita maxima]) HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-106 Identity = 197/208 (94.71%), Postives = 200/208 (96.15%), Query Frame = 0
BLAST of Carg05590 vs. NCBI nr
Match: XP_023548337.1 (uncharacterized protein LOC111807005 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385.6 bits (989), Expect = 1.1e-103 Identity = 196/203 (96.55%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of Carg05590 vs. NCBI nr
Match: XP_023006014.1 (uncharacterized protein LOC111498891 [Cucurbita maxima]) HSP 1 Score: 266.9 bits (681), Expect = 5.6e-68 Identity = 137/204 (67.16%), Postives = 161/204 (78.92%), Query Frame = 0
BLAST of Carg05590 vs. NCBI nr
Match: XP_022958853.1 (uncharacterized protein LOC111460007 [Cucurbita moschata]) HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66 Identity = 131/204 (64.22%), Postives = 162/204 (79.41%), Query Frame = 0
BLAST of Carg05590 vs. TrEMBL
Match: tr|A0A0A0KNE7|A0A0A0KNE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469020 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 8.7e-33 Identity = 71/130 (54.62%), Postives = 98/130 (75.38%), Query Frame = 0
BLAST of Carg05590 vs. TrEMBL
Match: tr|A0A0A0K9W8|A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-28 Identity = 82/202 (40.59%), Postives = 110/202 (54.46%), Query Frame = 0
BLAST of Carg05590 vs. TrEMBL
Match: tr|A0A1S4E5E3|A0A1S4E5E3_CUCME (uncharacterized protein LOC103503425 OS=Cucumis melo OX=3656 GN=LOC103503425 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 9.3e-27 Identity = 69/162 (42.59%), Postives = 102/162 (62.96%), Query Frame = 0
BLAST of Carg05590 vs. TrEMBL
Match: tr|A0A1S3C8E9|A0A1S3C8E9_CUCME (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25 Identity = 83/211 (39.34%), Postives = 117/211 (55.45%), Query Frame = 0
BLAST of Carg05590 vs. TrEMBL
Match: tr|A0A1S3C901|A0A1S3C901_CUCME (uncharacterized protein LOC103498007 OS=Cucumis melo OX=3656 GN=LOC103498007 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 3.0e-25 Identity = 75/201 (37.31%), Postives = 102/201 (50.75%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|