CmoCh05G009330 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G009330
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING zinc finger protein-like
LocationCmo_Chr05 : 7329580 .. 7330329 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAAGCTAGCATCGAACGCCTTCGCTGGCATTCGATCTAAGAATAACTCTGCTGTATCTAAGCAAGCTTTCTGGGAGTGCTCGGACGACGAGGTGTGCTCGGAAGACAGTAGAGATGAAGAATTGGAATGCCCAATATGCTGGGAATCTTTCAACATTGTGGAGAATGTGCCGTATGTCTTATGGTGTGGCCATACATTATGCAGAAATTGTGTATTAGGCCTTCAAGGGTATGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATATCGTGCCCGTGGTGTCATCAGCTTTCCTTACGGGTCGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCCTTAATGGCAATGAGGGAAAACTTGATCACCCCTTCAATGGGGATAATCAACCAGTTTTTTCTCTGCCTCCATCCGACGCCGATGCTTCTCAGAGGCATTCGTTTTCAGACGGTCGTGTTAGTCGCCACGGAATAGAGAGGCGACGACGGTTGTTTTCCTATGAACATTTAGATTGCGTCATCCATTTAATCTTCAAGTTTCTACTGGCTGTCATATTTGTTCTGATAGTAGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTTTACTTGCTAATAACTTTCCTTTTTGCATTGCCATCTTTGCTGATATTTTACATTTCACTCCATGCTTTGGAAAAGCTTATGAATGATATATCTTCATGA

mRNA sequence

ATGTGGAAGCTAGCATCGAACGCCTTCGCTGGCATTCGATCTAAGAATAACTCTGCTGTATCTAAGCAAGCTTTCTGGGAGTGCTCGGACGACGAGGTGTGCTCGGAAGACAGTAGAGATGAAGAATTGGAATGCCCAATATGCTGGGAATCTTTCAACATTGTGGAGAATGTGCCGTATGTCTTATGGTGTGGCCATACATTATGCAGAAATTGTGTATTAGGCCTTCAAGGGTATGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATATCGTGCCCGTGGTGTCATCAGCTTTCCTTACGGGTCGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCCTTAATGGCAATGAGGGAAAACTTGATCACCCCTTCAATGGGGATAATCAACCAGTTTTTTCTCTGCCTCCATCCGACGCCGATGCTTCTCAGAGGCATTCGTTTTCAGACGGTCGTGTTAGTCGCCACGGAATAGAGAGGCGACGACGGTTGTTTTCCTATGAACATTTAGATTGCGTCATCCATTTAATCTTCAAGTTTCTACTGGCTGTCATATTTGTTCTGATAGTAGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTTTACTTGCTAATAACTTTCCTTTTTGCATTGCCATCTTTGCTGATATTTTACATTTCACTCCATGCTTTGGAAAAGCTTATGAATGATATATCTTCATGA

Coding sequence (CDS)

ATGTGGAAGCTAGCATCGAACGCCTTCGCTGGCATTCGATCTAAGAATAACTCTGCTGTATCTAAGCAAGCTTTCTGGGAGTGCTCGGACGACGAGGTGTGCTCGGAAGACAGTAGAGATGAAGAATTGGAATGCCCAATATGCTGGGAATCTTTCAACATTGTGGAGAATGTGCCGTATGTCTTATGGTGTGGCCATACATTATGCAGAAATTGTGTATTAGGCCTTCAAGGGTATGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATATCGTGCCCGTGGTGTCATCAGCTTTCCTTACGGGTCGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCCTTAATGGCAATGAGGGAAAACTTGATCACCCCTTCAATGGGGATAATCAACCAGTTTTTTCTCTGCCTCCATCCGACGCCGATGCTTCTCAGAGGCATTCGTTTTCAGACGGTCGTGTTAGTCGCCACGGAATAGAGAGGCGACGACGGTTGTTTTCCTATGAACATTTAGATTGCGTCATCCATTTAATCTTCAAGTTTCTACTGGCTGTCATATTTGTTCTGATAGTAGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTTTACTTGCTAATAACTTTCCTTTTTGCATTGCCATCTTTGCTGATATTTTACATTTCACTCCATGCTTTGGAAAAGCTTATGAATGATATATCTTCATGA
Homology
[Close]
BLAST of CmoCh05G009330 vs. TrEMBL
Match: V7CH03_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G068700g PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.0e-66
Identity = 143/262 (54.58%), Postives = 177/262 (67.56%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   IR+K ++    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 1   MWSFASNALTSIRTKRSTKQLSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  VL   T+QIRIP FISCPWCH LS R++YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVLNFPTQQIRIPFFISCPWCHLLSFRIIYKGNLKYPCKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRH---------- 180
           LLWMVESLNG   KL     GD QP++S P  +   SQ  + +  R S            
Sbjct: 121 LLWMVESLNGERHKLVSSC-GDTQPIWS-PKCNLLGSQVSTCNLRRASMSPYSRQVGSNR 180

Query: 181 --GIERRRRLFS-YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
             G+      FS ++ LD  +H   KF L VIF+LI +F +PGSA+IL+LYLL+T +FA+
Sbjct: 181 DVGVSGEAHYFSLHKSLDFFLHFTSKFPLIVIFLLIALFAVPGSAVILILYLLVTIIFAI 240

Query: 241 PSLLIFYISLHALEKLMNDISS 250
           PS L+ Y +   +++L+ +I+S
Sbjct: 241 PSFLVLYFAYPTIQRLIREITS 260

[Close]
BLAST of CmoCh05G009330 vs. TrEMBL
Match: A0A0D2RKN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G144000 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-65
Identity = 142/264 (53.79%), Postives = 180/264 (68.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASN  A I  K+ S  + QA  ECSDDE+CS  SRDE LECPICWE FNIVENVPY
Sbjct: 1   MWSFASNTIASIGLKS-SKEANQACSECSDDELCSNGSRDEGLECPICWEPFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NC+LGLQ  VLKL T+QI+IP+FISCPWCH +SLR+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTQQIKIPMFISCPWCHLISLRLVYKGNLKFPRKNFF 120

Query: 121 LLWMVESLNGNE-GKLDHPFNGDNQPVFSL-------PPSDADASQRHSFSDGRVSRHGI 180
           +LWM+ESLNG+  G      +GDNQPV SL         + +   +R S+++       +
Sbjct: 121 ILWMIESLNGDRYGISRRNLSGDNQPVGSLRCNLMLGNQAISGVVRRGSYANRSEQNRSL 180

Query: 181 E-------RRRRLFSYEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLF 240
           +        R     ++ LD  IH   KF L +IF+L+V F IPGSA+ILLLY L+T +F
Sbjct: 181 DTGGRNNAERHHFSLHKSLDFFIHFTSKFPLVIIFLLVVFFAIPGSAVILLLYFLVTVVF 240

Query: 241 ALPSLLIFYISLHALEKLMNDISS 250
           A+PS L+ Y +   L++L+ +I+S
Sbjct: 241 AIPSFLVLYFAFPMLDRLVREITS 263

[Close]
BLAST of CmoCh05G009330 vs. TrEMBL
Match: A0A0D2VBD0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G091600 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 145/259 (55.98%), Postives = 173/259 (66.80%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA A I  KN S  S +A  E SDD+VCS  SRDE LECPICWESFNIVENVPY
Sbjct: 1   MWGFASNAIASIGLKN-SKESSRACSEFSDDDVCSNGSRDEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NC+LGLQ  VLKL T Q  IP+F+SCPWCH LSLR+VYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTSQFEIPLFVSCPWCHLLSLRLVYKGNLKFPSKNFF 120

Query: 121 LLWMVESLNGNE-GKLDHPFNGDNQPVFSLPPSDADASQR-----HSFSDGRVSRHG--- 180
           LLWM+ESLNG+  G +     GDNQ    L    +    R     H     R   +G   
Sbjct: 121 LLWMIESLNGDRYGVVRRASPGDNQCNLMLGNQASSGVVRRELYAHGSQQIRSGDNGGSS 180

Query: 181 -IERRRRLFSYEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSL 240
            +ER  R   Y+     +HL  KF L ++ +LIV F IPGS +ILLLYLL+T +FA+PSL
Sbjct: 181 NVERHHRFSLYKSFYFFVHLTTKFPLVIMLLLIVFFAIPGSVVILLLYLLVTVVFAVPSL 240

Query: 241 LIFYISLHALEKLMNDISS 250
           L+ Y +   L +L+ +I+S
Sbjct: 241 LVMYFAFPMLNRLVREIAS 258

[Close]
BLAST of CmoCh05G009330 vs. TrEMBL
Match: A0A0S3T1L8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G048700 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 142/262 (54.20%), Postives = 176/262 (67.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   +R+K  S    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  V+   T+QIRIP FISCPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVS-----------R 180
           LLWMVESLNG+  KL    +GD QP++S P  +   SQ  + +  R S           R
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWS-PKCNLLGSQVSTCNQRRASMSPYSRQVGSDR 181

Query: 181 H-GIERRRRLFS-YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
           H G       FS ++ LD  +    KF L VIF+LI +F +PGS +IL+LYLL+T LFA+
Sbjct: 182 HVGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAV 241

Query: 241 PSLLIFYISLHALEKLMNDISS 250
           PS L+ Y +   +++L+ +I+S
Sbjct: 242 PSFLVLYFAYPTIQRLIREITS 261

[Close]
BLAST of CmoCh05G009330 vs. TrEMBL
Match: A0A0L9UTG9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g118800 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 142/262 (54.20%), Postives = 176/262 (67.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   +R+K  S    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  V+   T+QIRIP FISCPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVS-----------R 180
           LLWMVESLNG+  KL    +GD QP++S P  +   SQ  + +  R S           R
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWS-PKCNLLGSQVSTCNQRRASMSPYSRQVGSDR 181

Query: 181 H-GIERRRRLFS-YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
           H G       FS ++ LD  +    KF L VIF+LI +F +PGS +IL+LYLL+T LFA+
Sbjct: 182 HVGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAV 241

Query: 241 PSLLIFYISLHALEKLMNDISS 250
           PS L+ Y +   +++L+ +I+S
Sbjct: 242 PSFLVLYFAYPTIQRLIREITS 261

[Close]
BLAST of CmoCh05G009330 vs. TAIR10
Match: AT1G69330.1 (AT1G69330.1 RING/U-box superfamily protein)

HSP 1 Score: 231.5 bits (589), Expect = 5.7e-61
Identity = 141/271 (52.03%), Postives = 172/271 (63.47%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEE-LECPICWESFNIVENVP 60
           MW  ASN    +  K +   S QA  +CSDDEV S  SRDEE LECPICWESFNIVENVP
Sbjct: 1   MWGFASNVIGSMGLKKSPKDSAQASSQCSDDEV-SNISRDEEGLECPICWESFNIVENVP 60

Query: 61  YVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGHTLC+NCV GLQ  VL+L+++ IRIP F+SCPWC  LS R+VYKGNLKFP KNF
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVESLNGNE-GKLDHPFNG----DNQPVFSLPPSDADASQRHSFSDGRVSR----- 180
           FLLWMVESLNG+     D   +G    DNQ     P         HS ++  V+R     
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLG-NHSSNNNLVARPLLRN 180

Query: 181 ----------HGIERRRRLFSY-EHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLY 240
                     H  +  R+LFS+ + LD  I    KF   +IF+LIV F IPGS +IL LY
Sbjct: 181 QSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALY 240

Query: 241 LLITFLFALPSLLIFYISLHALEKLMNDISS 250
            L+T LFA+P+ L+ Y +   LE+L+N+I+S
Sbjct: 241 FLLTILFAVPAGLVLYFAYPILERLVNEITS 269

[Close]
BLAST of CmoCh05G009330 vs. TAIR10
Match: AT3G29270.1 (AT3G29270.1 RING/U-box superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-54
Identity = 121/258 (46.90%), Postives = 160/258 (62.02%), Query Frame = 1 

Query: 1   MWKLASNAFAG-IRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVP 60
           MW LAS+   G I  KN+      A  ECSDD+V S  S+DE LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  YVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGHT+C+NC+LGLQ  ++KL T  +++P+FISCPWC+ LS R+V++G L+FP KN+
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVESLNG----------NEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSR 180
           F+LWMVE +NG           +G  DH       P        +      S +D R+ R
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTDGNNDHT-RETPSPCLHNRHHRSQPEPSRSVNDHRIPR 188

Query: 181 HGIERRRRLFSYEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPS 240
             I+   R    + L   + L  KF L VIF+LI+++ IP SA IL +Y+L+T L ALPS
Sbjct: 189 DNIQTSLR----KSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLALPS 248

Query: 241 LLIFYISLHALEKLMNDI 248
            LI Y +   L+ L+ +I
Sbjct: 249 FLILYFAYPCLDWLVREI 261

[Close]
BLAST of CmoCh05G009330 vs. TAIR10
Match: AT1G74370.1 (AT1G74370.1 RING/U-box superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 9.1e-43
Identity = 112/265 (42.26%), Postives = 161/265 (60.75%), Query Frame = 1 

Query: 1   MWKLASNAFA-GIRSKNNSAVSK--QAFWECSDDEVCSEDSRDEELECPICWESFNIVEN 60
           MW LAS +   G  SK   A +K  +A  + S D    + +++E+LECPICWESFN+VEN
Sbjct: 1   MWNLASKSIREGFISKGEEAATKPRRATLDRSGDG--RKTTKEEKLECPICWESFNVVEN 60

Query: 61  VPYVLWCGHTLCRNCVLGLQ-GYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPS 120
           VPYVLWCGHT+C+ C+LGLQ   V+K +    ++P F++CPWC+ LSLR+V  G ++FPS
Sbjct: 61  VPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPS 120

Query: 121 KNFFLLWMVESLNG--NEGKLDHPFNGDNQ--------PVFSLPPSDADASQRHSFSDGR 180
           KNF+LLWMVES+NG  +E   D+      Q         V +    D       S+ +G 
Sbjct: 121 KNFYLLWMVESMNGSRSEAPSDNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSWWNG- 180

Query: 181 VSRHGIERRRRLFS--YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFL 240
           V+R G  R  RL     + +  V HL+ KF L VIF+L+ ++ IP SA +L +Y  +TF 
Sbjct: 181 VTR-GFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFA 240

Query: 241 FALPSLLIFYISLHALEKLMNDISS 250
            A+PS L+ Y +  +L  L+ +I++
Sbjct: 241 LAVPSFLVLYFAFPSLNWLIREIAT 261

[Close]
BLAST of CmoCh05G009330 vs. TAIR10
Match: AT1G21651.1 (AT1G21651.1 zinc ion binding)

HSP 1 Score: 48.9 bits (115), Expect = 5.2e-06
Identity = 31/89 (34.83%), Postives = 43/89 (48.31%), Query Frame = 1 

Query: 41  EELECPICWESFNIVENVPYVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCH 100
           EE ECP+C +S++    VP VL CGHT C  C+  L            + P  I CP C 
Sbjct: 2   EEPECPVCLQSYDGESTVPRVLACGHTACEECLTNLPK----------KFPDTIRCPACT 61

Query: 101 QLSLRVVYKGNLKFPSKNFFLLWMVESLN 130
            L ++   +G    P KN  LL +  S++
Sbjct: 62  VL-VKFPPQGPSALP-KNIDLLRLFPSIS 78

[Close]
BLAST of CmoCh05G009330 vs. TAIR10
Match: AT1G21650.3 (AT1G21650.3 Preprotein translocase SecA family protein)

HSP 1 Score: 48.9 bits (115), Expect = 5.2e-06
Identity = 31/89 (34.83%), Postives = 43/89 (48.31%), Query Frame = 1 

Query: 41  EELECPICWESFNIVENVPYVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCH 100
           EE ECP+C +S++    VP VL CGHT C  C+  L            + P  I CP C 
Sbjct: 2   EEPECPVCLQSYDGESTVPRVLACGHTACEECLTNLPK----------KFPDTIRCPACT 61

Query: 101 QLSLRVVYKGNLKFPSKNFFLLWMVESLN 130
            L ++   +G    P KN  LL +  S++
Sbjct: 62  VL-VKFPPQGPSALP-KNIDLLRLFPSIS 78

[Close]
BLAST of CmoCh05G009330 vs. NCBI nr
Match: gi|659131481|ref|XP_008465708.1| (PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo])

HSP 1 Score: 389.0 bits (998), Expect = 6.1e-105
Identity = 203/249 (81.53%), Postives = 212/249 (85.14%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGIRSK NS V KQ FWECSDDEVCSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LC+NCVLGLQG VLKLATRQ+RIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRHGIERRRRLFS 180
           LLWMVES NGNEGKLDH FN DNQ VFSLP              G V+      RRRLF 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLP-------------SGTVT----SERRRLFF 180

Query: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240
           Y HLDCVIHL+FKFLL VIFVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YNHLDCVIHLVFKFLLTVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 232

Query: 241 EKLMNDISS 250
           +KLMNDI+S
Sbjct: 241 DKLMNDITS 232

[Close]
BLAST of CmoCh05G009330 vs. NCBI nr
Match: gi|778703011|ref|XP_011655300.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218619 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 1.7e-102
Identity = 201/249 (80.72%), Postives = 209/249 (83.94%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGIRSK NS VSKQ FWECSDDE CSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VL CGH+LC+NCVLGLQG VLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLXCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRHGIERRRRLFS 180
           LLWMVES NGNEGKLDH FN DN P+FSLP              G V+      RRRLF 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNHPLFSLPSGT---------GTGTVT----SERRRLFF 180

Query: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240
           Y HLD V+HLIFKFLL VIFVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++ HAL
Sbjct: 181 YNHLDFVVHLIFKFLLLVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLAFHAL 236

Query: 241 EKLMNDISS 250
           EKLMNDI+S
Sbjct: 241 EKLMNDITS 236

[Close]
BLAST of CmoCh05G009330 vs. NCBI nr
Match: gi|593788762|ref|XP_007157420.1| (hypothetical protein PHAVU_002G068700g [Phaseolus vulgaris])

HSP 1 Score: 260.0 bits (663), Expect = 4.2e-66
Identity = 143/262 (54.58%), Postives = 177/262 (67.56%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   IR+K ++    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 1   MWSFASNALTSIRTKRSTKQLSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  VL   T+QIRIP FISCPWCH LS R++YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVLNFPTQQIRIPFFISCPWCHLLSFRIIYKGNLKYPCKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRH---------- 180
           LLWMVESLNG   KL     GD QP++S P  +   SQ  + +  R S            
Sbjct: 121 LLWMVESLNGERHKLVSSC-GDTQPIWS-PKCNLLGSQVSTCNLRRASMSPYSRQVGSNR 180

Query: 181 --GIERRRRLFS-YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
             G+      FS ++ LD  +H   KF L VIF+LI +F +PGSA+IL+LYLL+T +FA+
Sbjct: 181 DVGVSGEAHYFSLHKSLDFFLHFTSKFPLIVIFLLIALFAVPGSAVILILYLLVTIIFAI 240

Query: 241 PSLLIFYISLHALEKLMNDISS 250
           PS L+ Y +   +++L+ +I+S
Sbjct: 241 PSFLVLYFAYPTIQRLIREITS 260

[Close]
BLAST of CmoCh05G009330 vs. NCBI nr
Match: gi|823157700|ref|XP_012478732.1| (PREDICTED: uncharacterized protein LOC105794222 [Gossypium raimondii])

HSP 1 Score: 257.3 bits (656), Expect = 2.8e-65
Identity = 142/264 (53.79%), Postives = 180/264 (68.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASN  A I  K+ S  + QA  ECSDDE+CS  SRDE LECPICWE FNIVENVPY
Sbjct: 1   MWSFASNTIASIGLKS-SKEANQACSECSDDELCSNGSRDEGLECPICWEPFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NC+LGLQ  VLKL T+QI+IP+FISCPWCH +SLR+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTQQIKIPMFISCPWCHLISLRLVYKGNLKFPRKNFF 120

Query: 121 LLWMVESLNGNE-GKLDHPFNGDNQPVFSL-------PPSDADASQRHSFSDGRVSRHGI 180
           +LWM+ESLNG+  G      +GDNQPV SL         + +   +R S+++       +
Sbjct: 121 ILWMIESLNGDRYGISRRNLSGDNQPVGSLRCNLMLGNQAISGVVRRGSYANRSEQNRSL 180

Query: 181 E-------RRRRLFSYEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLF 240
           +        R     ++ LD  IH   KF L +IF+L+V F IPGSA+ILLLY L+T +F
Sbjct: 181 DTGGRNNAERHHFSLHKSLDFFIHFTSKFPLVIIFLLVVFFAIPGSAVILLLYFLVTVVF 240

Query: 241 ALPSLLIFYISLHALEKLMNDISS 250
           A+PS L+ Y +   L++L+ +I+S
Sbjct: 241 AIPSFLVLYFAFPMLDRLVREITS 263

[Close]
BLAST of CmoCh05G009330 vs. NCBI nr
Match: gi|657994251|ref|XP_008389428.1| (PREDICTED: uncharacterized protein LOC103451779 [Malus domestica])

HSP 1 Score: 255.8 bits (652), Expect = 8.0e-65
Identity = 141/262 (53.82%), Postives = 184/262 (70.23%), Query Frame = 1 

Query: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNAF  +  K +S+   Q   + SDDEVCS  SR+E LECPIC ESFNIVENVP+
Sbjct: 1   MWGFASNAFTSVGLKRSSSEPSQVCLDSSDDEVCSNSSREEGLECPICLESFNIVENVPH 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLCRNCVLGLQ  ++KL++++ +IP FISCPWCHQLSLR++YKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQWALVKLSSQKFKIPFFISCPWCHQLSLRLIYKGNLKFPRKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQ----PVFSLPPSDADAS---QRHSFSDGRVSRHGIE 180
           LLWMVES NG+  K     +G+NQ    P+ SL   +  A+   +R+  S   +SRH  +
Sbjct: 121 LLWMVESFNGDRLKFVPAISGENQLIGSPIASLAIGNQAANGNLRRNHSSCPSLSRHNRD 180

Query: 181 RR-----RRLFS-YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
            R     R  FS ++ LDC IH+  KF L ++F++I  F IPGSA+IL +YLL+T +FA+
Sbjct: 181 DRGGHVERHQFSLHKSLDCFIHITSKFPLVILFLVIAFFAIPGSAIILAIYLLLTVVFAI 240

Query: 241 PSLLIFYISLHALEKLMNDISS 250
           PS L+ Y +   L++L+ +ISS
Sbjct: 241 PSFLLLYFAYPILDRLVKEISS 262

The following BLAST results are available for this feature:
BLAST of CmoCh05G009330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh05G009330 vs. TrEMBL
Match NameE-valueIdentityDescription
V7CH03_PHAVU3.0e-6654.58Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G068700g PE=4 SV=1[more]
A0A0D2RKN8_GOSRA1.9e-6553.79Uncharacterized protein OS=Gossypium raimondii GN=B456_005G144000 PE=4 SV=1[more]
A0A0D2VBD0_GOSRA3.6e-6455.98Uncharacterized protein OS=Gossypium raimondii GN=B456_013G091600 PE=4 SV=1[more]
A0A0S3T1L8_PHAAN3.6e-6454.20Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G048700 PE=... [more]
A0A0L9UTG9_PHAAN3.6e-6454.20Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g118800 PE=4 SV=1[more]
BLAST of CmoCh05G009330 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69330.15.7e-6152.03 RING/U-box superfamily protein[more]
AT3G29270.11.0e-5446.90 RING/U-box superfamily protein[more]
AT1G74370.19.1e-4342.26 RING/U-box superfamily protein[more]
AT1G21651.15.2e-0634.83 zinc ion binding[more]
AT1G21650.35.2e-0634.83 Preprotein translocase SecA family protein[more]
BLAST of CmoCh05G009330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131481|ref|XP_008465708.1|6.1e-10581.53PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo][more]
gi|778703011|ref|XP_011655300.1|1.7e-10280.72PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218619 [Cucumis sa... [more]
gi|593788762|ref|XP_007157420.1|4.2e-6654.58hypothetical protein PHAVU_002G068700g [Phaseolus vulgaris][more]
gi|823157700|ref|XP_012478732.1|2.8e-6553.79PREDICTED: uncharacterized protein LOC105794222 [Gossypium raimondii][more]
gi|657994251|ref|XP_008389428.1|8.0e-6553.82PREDICTED: uncharacterized protein LOC103451779 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR027370Znf-RING_LisH
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G009330.1CmoCh05G009330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 45..100
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 40..101
score: 3.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 64..73
scor
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 45..97
score: 1.
NoneNo IPR availablePANTHERPTHR13139RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 17..249
score: 4.0
NoneNo IPR availablePANTHERPTHR13139:SF47SUBFAMILY NOT NAMEDcoord: 17..249
score: 4.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 40..102
score: 2.54

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G009330Cucsa.275280Cucumber (Gy14) v1cgycmoB0764
CmoCh05G009330CmaCh12G007650Cucurbita maxima (Rimu)cmacmoB197
CmoCh05G009330CmaCh05G009160Cucurbita maxima (Rimu)cmacmoB788
CmoCh05G009330Cla005547Watermelon (97103) v1cmowmB743
CmoCh05G009330Csa5G484680Cucumber (Chinese Long) v2cmocuB794
CmoCh05G009330MELO3C002929Melon (DHL92) v3.5.1cmomeB705
CmoCh05G009330ClCG09G022190Watermelon (Charleston Gray)cmowcgB686
CmoCh05G009330CSPI05G16470Wild cucumber (PI 183967)cmocpiB798
CmoCh05G009330Lsi02G017420Bottle gourd (USVL1VR-Ls)cmolsiB711
CmoCh05G009330Cp4.1LG11g07510Cucurbita pepo (Zucchini)cmocpeB726
CmoCh05G009330Cp4.1LG07g05400Cucurbita pepo (Zucchini)cmocpeB753
CmoCh05G009330MELO3C002929.2Melon (DHL92) v3.6.1cmomedB802
CmoCh05G009330CsaV3_5G025490Cucumber (Chinese Long) v3cmocucB0935
CmoCh05G009330Cla97C09G183640Watermelon (97103) v2cmowmbB803
CmoCh05G009330Bhi06G000669Wax gourdcmowgoB0922
CmoCh05G009330CsGy5G016170Cucumber (Gy14) v2cgybcmoB673
CmoCh05G009330Carg26440Silver-seed gourdcarcmoB1425
CmoCh05G009330Carg17611Silver-seed gourdcarcmoB0183
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G009330CmoCh12G006640Cucurbita moschata (Rifu)cmocmoB157
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G009330Cucurbita moschata (Rifu)cmocmoB155
CmoCh05G009330Cucurbita maxima (Rimu)cmacmoB201
CmoCh05G009330Cucurbita maxima (Rimu)cmacmoB787
CmoCh05G009330Cucurbita pepo (Zucchini)cmocpeB721