Cp4.1LG11g07510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box superfamily protein
LocationCp4.1LG11 : 5712150 .. 5712899 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAAGCTGGCATCGAACGCCTTTGCTGGCATTCAATCTAAGAATAACTCGGCTGTATCTAAGCAAGCTTTCTGGGAGTGTTCGGACGACGAGGTTTGCTCGGAAGACAGTAGAGATGAAGAATTGGAATGCCCAATATGCTGGGAATCTTTCAACATTGTGGAGAATGTGCCTTATGTCTTATGGTGTGGCCATACATTATGCAGAAATTGTGTATTAGGCCTTCAAGGGTATGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATACCGTGCCCGTGGTGTCATCAGCTTTCGCTACGGGTCGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCCTTAATGGCAATGAGGGAAAACTTGATCATCCCTTCAATGGGGATAATCAACCAGTTTTTTCTCTGCCTCCATCGGACGCCAATGCTTCTCAAAGGCATTCGTTTTCGGACGGTCGTGTTAGTCGCCACGGAATAGAGAGGCGACGACGGTTGTTTTGCTATGAACATTTAGATTGCGTCATCCATTTAGTCTTCAAGTTTCTACTGGTTGTCATATTTGTTCTGATAGTAGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTTTACTTGCTAATAACTTTCCTTTTTGCATTGCCATCTTTGCTGATATTTTACATTTCACTCCATGCTTTGGAAAAGCTTATGAATGATATAACTTCATGA

mRNA sequence

ATGTGGAAGCTGGCATCGAACGCCTTTGCTGGCATTCAATCTAAGAATAACTCGGCTGTATCTAAGCAAGCTTTCTGGGAGTGTTCGGACGACGAGGTTTGCTCGGAAGACAGTAGAGATGAAGAATTGGAATGCCCAATATGCTGGGAATCTTTCAACATTGTGGAGAATGTGCCTTATGTCTTATGGTGTGGCCATACATTATGCAGAAATTGTGTATTAGGCCTTCAAGGGTATGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATACCGTGCCCGTGGTGTCATCAGCTTTCGCTACGGGTCGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCCTTAATGGCAATGAGGGAAAACTTGATCATCCCTTCAATGGGGATAATCAACCAGTTTTTTCTCTGCCTCCATCGGACGCCAATGCTTCTCAAAGGCATTCGTTTTCGGACGGTCGTGTTAGTCGCCACGGAATAGAGAGGCGACGACGGTTGTTTTGCTATGAACATTTAGATTGCGTCATCCATTTAGTCTTCAAGTTTCTACTGGTTGTCATATTTGTTCTGATAGTAGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTTTACTTGCTAATAACTTTCCTTTTTGCATTGCCATCTTTGCTGATATTTTACATTTCACTCCATGCTTTGGAAAAGCTTATGAATGATATAACTTCATGA

Coding sequence (CDS)

ATGTGGAAGCTGGCATCGAACGCCTTTGCTGGCATTCAATCTAAGAATAACTCGGCTGTATCTAAGCAAGCTTTCTGGGAGTGTTCGGACGACGAGGTTTGCTCGGAAGACAGTAGAGATGAAGAATTGGAATGCCCAATATGCTGGGAATCTTTCAACATTGTGGAGAATGTGCCTTATGTCTTATGGTGTGGCCATACATTATGCAGAAATTGTGTATTAGGCCTTCAAGGGTATGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATACCGTGCCCGTGGTGTCATCAGCTTTCGCTACGGGTCGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCCTTAATGGCAATGAGGGAAAACTTGATCATCCCTTCAATGGGGATAATCAACCAGTTTTTTCTCTGCCTCCATCGGACGCCAATGCTTCTCAAAGGCATTCGTTTTCGGACGGTCGTGTTAGTCGCCACGGAATAGAGAGGCGACGACGGTTGTTTTGCTATGAACATTTAGATTGCGTCATCCATTTAGTCTTCAAGTTTCTACTGGTTGTCATATTTGTTCTGATAGTAGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTTTACTTGCTAATAACTTTCCTTTTTGCATTGCCATCTTTGCTGATATTTTACATTTCACTCCATGCTTTGGAAAAGCTTATGAATGATATAACTTCATGA

Protein sequence

MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPYVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFFLLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRHGIERRRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHALEKLMNDITS
Homology
[Close]
BLAST of Cp4.1LG11g07510 vs. TrEMBL
Match: A0A0D2RKN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G144000 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.6e-66
Identity = 143/264 (54.17%), Postives = 180/264 (68.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASN  A I  K+ S  + QA  ECSDDE+CS  SRDE LECPICWE FNIVENVPY
Sbjct: 1   MWSFASNTIASIGLKS-SKEANQACSECSDDELCSNGSRDEGLECPICWEPFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NC+LGLQ  VLKL T+QI+IP+FI CPWCH +SLR+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTQQIKIPMFISCPWCHLISLRLVYKGNLKFPRKNFF 120

Query: 121 LLWMVESLNGNE-GKLDHPFNGDNQPVFSL-------PPSDANASQRHSFSDGRVSRHGI 180
           +LWM+ESLNG+  G      +GDNQPV SL         + +   +R S+++       +
Sbjct: 121 ILWMIESLNGDRYGISRRNLSGDNQPVGSLRCNLMLGNQAISGVVRRGSYANRSEQNRSL 180

Query: 181 E-------RRRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLF 240
           +        R     ++ LD  IH   KF LV+IF+L+V F IPGSA+ILLLY L+T +F
Sbjct: 181 DTGGRNNAERHHFSLHKSLDFFIHFTSKFPLVIIFLLVVFFAIPGSAVILLLYFLVTVVF 240

Query: 241 ALPSLLIFYISLHALEKLMNDITS 250
           A+PS L+ Y +   L++L+ +ITS
Sbjct: 241 AIPSFLVLYFAFPMLDRLVREITS 263

[Close]
BLAST of Cp4.1LG11g07510 vs. TrEMBL
Match: V7CH03_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G068700g PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-65
Identity = 141/262 (53.82%), Postives = 176/262 (67.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   I++K ++    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 1   MWSFASNALTSIRTKRSTKQLSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  VL   T+QIRIP FI CPWCH LS R++YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVLNFPTQQIRIPFFISCPWCHLLSFRIIYKGNLKYPCKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRH---------- 180
           LLWMVESLNG   KL     GD QP++S P  +   SQ  + +  R S            
Sbjct: 121 LLWMVESLNGERHKLVSSC-GDTQPIWS-PKCNLLGSQVSTCNLRRASMSPYSRQVGSNR 180

Query: 181 --GIERRRRLF-CYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
             G+      F  ++ LD  +H   KF L+VIF+LI +F +PGSA+IL+LYLL+T +FA+
Sbjct: 181 DVGVSGEAHYFSLHKSLDFFLHFTSKFPLIVIFLLIALFAVPGSAVILILYLLVTIIFAI 240

Query: 241 PSLLIFYISLHALEKLMNDITS 250
           PS L+ Y +   +++L+ +ITS
Sbjct: 241 PSFLVLYFAYPTIQRLIREITS 260

[Close]
BLAST of Cp4.1LG11g07510 vs. TrEMBL
Match: A0A0D2VBD0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G091600 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.2e-64
Identity = 145/259 (55.98%), Postives = 173/259 (66.80%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA A I  KN S  S +A  E SDD+VCS  SRDE LECPICWESFNIVENVPY
Sbjct: 1   MWGFASNAIASIGLKN-SKESSRACSEFSDDDVCSNGSRDEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NC+LGLQ  VLKL T Q  IP+F+ CPWCH LSLR+VYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTSQFEIPLFVSCPWCHLLSLRLVYKGNLKFPSKNFF 120

Query: 121 LLWMVESLNGNE-GKLDHPFNGDNQPVFSLPPSDANASQR-----HSFSDGRVSRHG--- 180
           LLWM+ESLNG+  G +     GDNQ    L    ++   R     H     R   +G   
Sbjct: 121 LLWMIESLNGDRYGVVRRASPGDNQCNLMLGNQASSGVVRRELYAHGSQQIRSGDNGGSS 180

Query: 181 -IERRRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPSL 240
            +ER  R   Y+     +HL  KF LV++ +LIV F IPGS +ILLLYLL+T +FA+PSL
Sbjct: 181 NVERHHRFSLYKSFYFFVHLTTKFPLVIMLLLIVFFAIPGSVVILLLYLLVTVVFAVPSL 240

Query: 241 LIFYISLHALEKLMNDITS 250
           L+ Y +   L +L+ +I S
Sbjct: 241 LVMYFAFPMLNRLVREIAS 258

[Close]
BLAST of Cp4.1LG11g07510 vs. TrEMBL
Match: A0A0L9UTG9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g118800 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 137/262 (52.29%), Postives = 173/262 (66.03%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   +++K  S    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  V+   T+QIRIP FI CPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRHGIERR----- 180
           LLWMVESLNG+  KL    +GD QP++S P  +   SQ  + +  R S     R+     
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWS-PKCNLLGSQVSTCNQRRASMSPYSRQVGSDR 181

Query: 181 --------RRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
                        ++ LD  +    KF L+VIF+LI +F +PGS +IL+LYLL+T LFA+
Sbjct: 182 HVGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAV 241

Query: 241 PSLLIFYISLHALEKLMNDITS 250
           PS L+ Y +   +++L+ +ITS
Sbjct: 242 PSFLVLYFAYPTIQRLIREITS 261

[Close]
BLAST of Cp4.1LG11g07510 vs. TrEMBL
Match: A0A0S3T1L8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G048700 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 137/262 (52.29%), Postives = 173/262 (66.03%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   +++K  S    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  V+   T+QIRIP FI CPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRHGIERR----- 180
           LLWMVESLNG+  KL    +GD QP++S P  +   SQ  + +  R S     R+     
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWS-PKCNLLGSQVSTCNQRRASMSPYSRQVGSDR 181

Query: 181 --------RRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
                        ++ LD  +    KF L+VIF+LI +F +PGS +IL+LYLL+T LFA+
Sbjct: 182 HVGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAV 241

Query: 241 PSLLIFYISLHALEKLMNDITS 250
           PS L+ Y +   +++L+ +ITS
Sbjct: 242 PSFLVLYFAYPTIQRLIREITS 261

[Close]
BLAST of Cp4.1LG11g07510 vs. TAIR10
Match: AT1G69330.1 (AT1G69330.1 RING/U-box superfamily protein)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-60
Identity = 141/271 (52.03%), Postives = 172/271 (63.47%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEE-LECPICWESFNIVENVP 60
           MW  ASN    +  K +   S QA  +CSDDEV S  SRDEE LECPICWESFNIVENVP
Sbjct: 1   MWGFASNVIGSMGLKKSPKDSAQASSQCSDDEV-SNISRDEEGLECPICWESFNIVENVP 60

Query: 61  YVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGHTLC+NCV GLQ  VL+L+++ IRIP F+ CPWC  LS R+VYKGNLKFP KNF
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVESLNGNE-GKLDHPFNG----DNQPVFSLPPSDANASQRHSFSDGRVSR----- 180
           FLLWMVESLNG+     D   +G    DNQ     P    +    HS ++  V+R     
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLG-NHSSNNNLVARPLLRN 180

Query: 181 ----------HGIERRRRLFCY-EHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLY 240
                     H  +  R+LF + + LD  I    KF  V+IF+LIV F IPGS +IL LY
Sbjct: 181 QSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALY 240

Query: 241 LLITFLFALPSLLIFYISLHALEKLMNDITS 250
            L+T LFA+P+ L+ Y +   LE+L+N+ITS
Sbjct: 241 FLLTILFAVPAGLVLYFAYPILERLVNEITS 269

[Close]
BLAST of Cp4.1LG11g07510 vs. TAIR10
Match: AT3G29270.1 (AT3G29270.1 RING/U-box superfamily protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54
Identity = 121/260 (46.54%), Postives = 161/260 (61.92%), Query Frame = 1 

Query: 1   MWKLASNAFAG-IQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVP 60
           MW LAS+   G I  KN+      A  ECSDD+V S  S+DE LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  YVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGHT+C+NC+LGLQ  ++KL T  +++P+FI CPWC+ LS R+V++G L+FP KN+
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVESLNG----------NEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSR 180
           F+LWMVE +NG           +G  DH       P        +      S +D R+ R
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTDGNNDHT-RETPSPCLHNRHHRSQPEPSRSVNDHRIPR 188

Query: 181 HGIERRRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPS 240
             I+   R    + L   + L  KF LVVIF+LI+++ IP SA IL +Y+L+T L ALPS
Sbjct: 189 DNIQTSLR----KSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLALPS 248

Query: 241 LLIFYISLHALEKLMNDITS 250
            LI Y +   L+ L+ +I +
Sbjct: 249 FLILYFAYPCLDWLVREIVT 263

[Close]
BLAST of Cp4.1LG11g07510 vs. TAIR10
Match: AT1G74370.1 (AT1G74370.1 RING/U-box superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42
Identity = 111/267 (41.57%), Postives = 157/267 (58.80%), Query Frame = 1 

Query: 1   MWKLASNAFA-GIQSKNNSAVSK--QAFWECSDDEVCSEDSRDEELECPICWESFNIVEN 60
           MW LAS +   G  SK   A +K  +A  + S D    + +++E+LECPICWESFN+VEN
Sbjct: 1   MWNLASKSIREGFISKGEEAATKPRRATLDRSGDG--RKTTKEEKLECPICWESFNVVEN 60

Query: 61  VPYVLWCGHTLCRNCVLGLQ-GYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPS 120
           VPYVLWCGHT+C+ C+LGLQ   V+K +    ++P F+ CPWC+ LSLR+V  G ++FPS
Sbjct: 61  VPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPS 120

Query: 121 KNFFLLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDAN--------ASQRHSFSDGRVS 180
           KNF+LLWMVES+NG+  +       DN+ V S      N        A       D R  
Sbjct: 121 KNFYLLWMVESMNGSRSEAP----SDNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSW 180

Query: 181 RHGIER------RRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLIT 240
            +G+ R      R      + +  V HL+ KF LVVIF+L+ ++ IP SA +L +Y  +T
Sbjct: 181 WNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVT 240

Query: 241 FLFALPSLLIFYISLHALEKLMNDITS 250
           F  A+PS L+ Y +  +L  L+ +I +
Sbjct: 241 FALAVPSFLVLYFAFPSLNWLIREIAT 261

[Close]
BLAST of Cp4.1LG11g07510 vs. TAIR10
Match: AT1G21651.1 (AT1G21651.1 zinc ion binding)

HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06
Identity = 31/89 (34.83%), Postives = 43/89 (48.31%), Query Frame = 1 

Query: 41  EELECPICWESFNIVENVPYVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCH 100
           EE ECP+C +S++    VP VL CGHT C  C+  L            + P  I CP C 
Sbjct: 2   EEPECPVCLQSYDGESTVPRVLACGHTACEECLTNLPK----------KFPDTIRCPACT 61

Query: 101 QLSLRVVYKGNLKFPSKNFFLLWMVESLN 130
            L ++   +G    P KN  LL +  S++
Sbjct: 62  VL-VKFPPQGPSALP-KNIDLLRLFPSIS 78

[Close]
BLAST of Cp4.1LG11g07510 vs. TAIR10
Match: AT1G21650.3 (AT1G21650.3 Preprotein translocase SecA family protein)

HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06
Identity = 31/89 (34.83%), Postives = 43/89 (48.31%), Query Frame = 1 

Query: 41  EELECPICWESFNIVENVPYVLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCH 100
           EE ECP+C +S++    VP VL CGHT C  C+  L            + P  I CP C 
Sbjct: 2   EEPECPVCLQSYDGESTVPRVLACGHTACEECLTNLPK----------KFPDTIRCPACT 61

Query: 101 QLSLRVVYKGNLKFPSKNFFLLWMVESLN 130
            L ++   +G    P KN  LL +  S++
Sbjct: 62  VL-VKFPPQGPSALP-KNIDLLRLFPSIS 78

[Close]
BLAST of Cp4.1LG11g07510 vs. NCBI nr
Match: gi|659131481|ref|XP_008465708.1| (PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 3.9e-104
Identity = 203/249 (81.53%), Postives = 211/249 (84.74%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGI+SK NS V KQ FWECSDDEVCSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LC+NCVLGLQG VLKLATRQ+RIPI I CPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRHGIERRRRLFC 180
           LLWMVES NGNEGKLDH FN DNQ VFSLP              G V+      RRRLF 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLP-------------SGTVT----SERRRLFF 180

Query: 181 YEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240
           Y HLDCVIHLVFKFLL VIFVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YNHLDCVIHLVFKFLLTVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 232

Query: 241 EKLMNDITS 250
           +KLMNDITS
Sbjct: 241 DKLMNDITS 232

[Close]
BLAST of Cp4.1LG11g07510 vs. NCBI nr
Match: gi|778703011|ref|XP_011655300.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218619 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 8.2e-102
Identity = 199/249 (79.92%), Postives = 209/249 (83.94%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGI+SK NS VSKQ FWECSDDE CSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VL CGH+LC+NCVLGLQG VLKLATRQIRIPI I CPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLXCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRHGIERRRRLFC 180
           LLWMVES NGNEGKLDH FN DN P+FSLP              G V+      RRRLF 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNHPLFSLPSGTGT---------GTVT----SERRRLFF 180

Query: 181 YEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240
           Y HLD V+HL+FKFLL+VIFVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++ HAL
Sbjct: 181 YNHLDFVVHLIFKFLLLVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLAFHAL 236

Query: 241 EKLMNDITS 250
           EKLMNDITS
Sbjct: 241 EKLMNDITS 236

[Close]
BLAST of Cp4.1LG11g07510 vs. NCBI nr
Match: gi|823157700|ref|XP_012478732.1| (PREDICTED: uncharacterized protein LOC105794222 [Gossypium raimondii])

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-65
Identity = 143/264 (54.17%), Postives = 180/264 (68.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASN  A I  K+ S  + QA  ECSDDE+CS  SRDE LECPICWE FNIVENVPY
Sbjct: 1   MWSFASNTIASIGLKS-SKEANQACSECSDDELCSNGSRDEGLECPICWEPFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NC+LGLQ  VLKL T+QI+IP+FI CPWCH +SLR+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTQQIKIPMFISCPWCHLISLRLVYKGNLKFPRKNFF 120

Query: 121 LLWMVESLNGNE-GKLDHPFNGDNQPVFSL-------PPSDANASQRHSFSDGRVSRHGI 180
           +LWM+ESLNG+  G      +GDNQPV SL         + +   +R S+++       +
Sbjct: 121 ILWMIESLNGDRYGISRRNLSGDNQPVGSLRCNLMLGNQAISGVVRRGSYANRSEQNRSL 180

Query: 181 E-------RRRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLF 240
           +        R     ++ LD  IH   KF LV+IF+L+V F IPGSA+ILLLY L+T +F
Sbjct: 181 DTGGRNNAERHHFSLHKSLDFFIHFTSKFPLVIIFLLVVFFAIPGSAVILLLYFLVTVVF 240

Query: 241 ALPSLLIFYISLHALEKLMNDITS 250
           A+PS L+ Y +   L++L+ +ITS
Sbjct: 241 AIPSFLVLYFAFPMLDRLVREITS 263

[Close]
BLAST of Cp4.1LG11g07510 vs. NCBI nr
Match: gi|593788762|ref|XP_007157420.1| (hypothetical protein PHAVU_002G068700g [Phaseolus vulgaris])

HSP 1 Score: 257.3 bits (656), Expect = 2.8e-65
Identity = 141/262 (53.82%), Postives = 176/262 (67.18%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNA   I++K ++    +   ECSDDEVCS  SRDE LECPICWESFNIVENVPY
Sbjct: 1   MWSFASNALTSIRTKRSTKQLSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLC+NCVLGLQ  VL   T+QIRIP FI CPWCH LS R++YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVLNFPTQQIRIPFFISCPWCHLLSFRIIYKGNLKYPCKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRH---------- 180
           LLWMVESLNG   KL     GD QP++S P  +   SQ  + +  R S            
Sbjct: 121 LLWMVESLNGERHKLVSSC-GDTQPIWS-PKCNLLGSQVSTCNLRRASMSPYSRQVGSNR 180

Query: 181 --GIERRRRLF-CYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
             G+      F  ++ LD  +H   KF L+VIF+LI +F +PGSA+IL+LYLL+T +FA+
Sbjct: 181 DVGVSGEAHYFSLHKSLDFFLHFTSKFPLIVIFLLIALFAVPGSAVILILYLLVTIIFAI 240

Query: 241 PSLLIFYISLHALEKLMNDITS 250
           PS L+ Y +   +++L+ +ITS
Sbjct: 241 PSFLVLYFAYPTIQRLIREITS 260

[Close]
BLAST of Cp4.1LG11g07510 vs. NCBI nr
Match: gi|657994251|ref|XP_008389428.1| (PREDICTED: uncharacterized protein LOC103451779 [Malus domestica])

HSP 1 Score: 254.2 bits (648), Expect = 2.3e-64
Identity = 138/262 (52.67%), Postives = 180/262 (68.70%), Query Frame = 1 

Query: 1   MWKLASNAFAGIQSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60
           MW  ASNAF  +  K +S+   Q   + SDDEVCS  SR+E LECPIC ESFNIVENVP+
Sbjct: 1   MWGFASNAFTSVGLKRSSSEPSQVCLDSSDDEVCSNSSREEGLECPICLESFNIVENVPH 60

Query: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFIPCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHTLCRNCVLGLQ  ++KL++++ +IP FI CPWCHQLSLR++YKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQWALVKLSSQKFKIPFFISCPWCHQLSLRLIYKGNLKFPRKNFF 120

Query: 121 LLWMVESLNGNEGKLDHPFNGDNQ----PVFSLPPSD--ANASQRHSFSD-------GRV 180
           LLWMVES NG+  K     +G+NQ    P+ SL   +  AN + R + S         R 
Sbjct: 121 LLWMVESFNGDRLKFVPAISGENQLIGSPIASLAIGNQAANGNLRRNHSSCPSLSRHNRD 180

Query: 181 SRHGIERRRRLFCYEHLDCVIHLVFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFAL 240
            R G   R +   ++ LDC IH+  KF LV++F++I  F IPGSA+IL +YLL+T +FA+
Sbjct: 181 DRGGHVERHQFSLHKSLDCFIHITSKFPLVILFLVIAFFAIPGSAIILAIYLLLTVVFAI 240

Query: 241 PSLLIFYISLHALEKLMNDITS 250
           PS L+ Y +   L++L+ +I+S
Sbjct: 241 PSFLLLYFAYPILDRLVKEISS 262

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2RKN8_GOSRA8.6e-6654.17Uncharacterized protein OS=Gossypium raimondii GN=B456_005G144000 PE=4 SV=1[more]
V7CH03_PHAVU1.9e-6553.82Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G068700g PE=4 SV=1[more]
A0A0D2VBD0_GOSRA6.2e-6455.98Uncharacterized protein OS=Gossypium raimondii GN=B456_013G091600 PE=4 SV=1[more]
A0A0L9UTG9_PHAAN1.8e-6352.29Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g118800 PE=4 SV=1[more]
A0A0S3T1L8_PHAAN1.8e-6352.29Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G048700 PE=... [more]
BLAST of Cp4.1LG11g07510 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69330.11.3e-6052.03 RING/U-box superfamily protein[more]
AT3G29270.11.4e-5446.54 RING/U-box superfamily protein[more]
AT1G74370.11.6e-4241.57 RING/U-box superfamily protein[more]
AT1G21651.16.8e-0634.83 zinc ion binding[more]
AT1G21650.36.8e-0634.83 Preprotein translocase SecA family protein[more]
BLAST of Cp4.1LG11g07510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131481|ref|XP_008465708.1|3.9e-10481.53PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo][more]
gi|778703011|ref|XP_011655300.1|8.2e-10279.92PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218619 [Cucumis sa... [more]
gi|823157700|ref|XP_012478732.1|1.2e-6554.17PREDICTED: uncharacterized protein LOC105794222 [Gossypium raimondii][more]
gi|593788762|ref|XP_007157420.1|2.8e-6553.82hypothetical protein PHAVU_002G068700g [Phaseolus vulgaris][more]
gi|657994251|ref|XP_008389428.1|2.3e-6452.67PREDICTED: uncharacterized protein LOC103451779 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR027370Znf-RING_LisH
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07510.1Cp4.1LG11g07510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 45..100
score: 9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 40..101
score: 1.2
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 64..73
scor
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 45..74
score: 2.
NoneNo IPR availablePANTHERPTHR13139RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 17..249
score: 4.0
NoneNo IPR availablePANTHERPTHR13139:SF47SUBFAMILY NOT NAMEDcoord: 17..249
score: 4.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 40..102
score: 4.24