CmoCh05G003280 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCATGAGGTTGGTAGAAAAATGTGTTAAGCTGTCAACTCACAAGAACTTTCTGGCTTGCAACAAAGTTGGTTTCCACCCTCGACTTCTGCATAATGGTCCAGACACCATTGATGAACTCTTAGACAGACATGTGGTAAAGAAAGAAAAGTCCTTTGATGATGATGAAGAAGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTCTAAGTCTCTACAGGGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGGCAGAATGCACGGAAGGAGTTTGAGGACGCCCGCTTTGAGACTGATCCAGAAATTGTGACCAGACTTCTCATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAGCAGAGGCAGGAGATTGATAAGAAACAAAGTGGTCGAGATCGACCCTGA ATGAGCATGAGGTTGGTAGAAAAATGTGTTAAGCTGTCAACTCACAAGAACTTTCTGGCTTGCAACAAAGTTGGTTTCCACCCTCGACTTCTGCATAATGGTCCAGACACCATTGATGAACTCTTAGACAGACATGTGGTAAAGAAAGAAAAGTCCTTTGATGATGATGAAGAAGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTCTAAGTCTCTACAGGGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGGCAGAATGCACGGAAGGAGTTTGAGGACGCCCGCTTTGAGACTGATCCAGAAATTGTGACCAGACTTCTCATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAGCAGAGGCAGGAGATTGATAAGAAACAAAGTGGTCGAGATCGACCCTGA ATGAGCATGAGGTTGGTAGAAAAATGTGTTAAGCTGTCAACTCACAAGAACTTTCTGGCTTGCAACAAAGTTGGTTTCCACCCTCGACTTCTGCATAATGGTCCAGACACCATTGATGAACTCTTAGACAGACATGTGGTAAAGAAAGAAAAGTCCTTTGATGATGATGAAGAAGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTCTAAGTCTCTACAGGGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGGCAGAATGCACGGAAGGAGTTTGAGGACGCCCGCTTTGAGACTGATCCAGAAATTGTGACCAGACTTCTCATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAGCAGAGGCAGGAGATTGATAAGAAACAAAGTGGTCGAGATCGACCCTGA
BLAST of CmoCh05G003280 vs. TrEMBL
Match: A0A0A0LMK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346590 PE=3 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 2.6e-68 Identity = 131/157 (83.44%), Postives = 149/157 (94.90%), Query Frame = 1
BLAST of CmoCh05G003280 vs. TrEMBL
Match: A0A061FEJ8_THECC (LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_034295 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.6e-54 Identity = 110/148 (74.32%), Postives = 130/148 (87.84%), Query Frame = 1
BLAST of CmoCh05G003280 vs. TrEMBL
Match: W9R727_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025066 PE=3 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 8.1e-54 Identity = 108/128 (84.38%), Postives = 122/128 (95.31%), Query Frame = 1
BLAST of CmoCh05G003280 vs. TrEMBL
Match: F6H0E1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00900 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.4e-53 Identity = 105/149 (70.47%), Postives = 127/149 (85.23%), Query Frame = 1
BLAST of CmoCh05G003280 vs. TrEMBL
Match: A0A068UFL1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024581001 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.1e-53 Identity = 104/131 (79.39%), Postives = 123/131 (93.89%), Query Frame = 1
BLAST of CmoCh05G003280 vs. TAIR10
Match: AT1G76060.1 (AT1G76060.1 LYR family of Fe/S cluster biogenesis protein) HSP 1 Score: 187.6 bits (475), Expect = 6.0e-48 Identity = 96/129 (74.42%), Postives = 109/129 (84.50%), Query Frame = 1
BLAST of CmoCh05G003280 vs. NCBI nr
Match: gi|700207150|gb|KGN62269.1| (hypothetical protein Csa_2G346590 [Cucumis sativus]) HSP 1 Score: 266.2 bits (679), Expect = 3.7e-68 Identity = 131/157 (83.44%), Postives = 149/157 (94.90%), Query Frame = 1
BLAST of CmoCh05G003280 vs. NCBI nr
Match: gi|659089585|ref|XP_008445589.1| (PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 5.6e-64 Identity = 124/139 (89.21%), Postives = 135/139 (97.12%), Query Frame = 1
BLAST of CmoCh05G003280 vs. NCBI nr
Match: gi|778674266|ref|XP_011650175.1| (PREDICTED: uncharacterized protein LOC101214249 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 4.0e-62 Identity = 119/139 (85.61%), Postives = 134/139 (96.40%), Query Frame = 1
BLAST of CmoCh05G003280 vs. NCBI nr
Match: gi|590594637|ref|XP_007017907.1| (LYR family of Fe/S cluster biogenesis protein [Theobroma cacao]) HSP 1 Score: 220.3 bits (560), Expect = 2.4e-54 Identity = 110/148 (74.32%), Postives = 130/148 (87.84%), Query Frame = 1
BLAST of CmoCh05G003280 vs. NCBI nr
Match: gi|703076699|ref|XP_010090401.1| (hypothetical protein L484_025066 [Morus notabilis]) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53 Identity = 108/128 (84.38%), Postives = 122/128 (95.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |