CSPI02G16840 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G16840
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Complex 1 LYR protein
Location	Chr2 : 16108660 .. 16111283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTACCCTCTGGTTTCTTCATTTCCAGTTCTCGCGAACTTCCCCCTTCATCAATCTCTCTCCTCGAAATCCGCTTCTCTTCTGTTCCTTCCACTTTCTCCGATCAATCCCTTCCCCCAATTTTCTTTTGCTTCGCTGCTTCAAGGTTTGTTCGTGATTTTCTTTTCCTTTGAAATTCTATTTTGTTAGAATTGCGGTGATCACAAATAGATGTTCGTTTTTGTATTATTAATCCCTATCTCTCTCTCACGGTTCCCCGAAATGTTGTTCAATTGCAACATGCCATAGAGTAACTAGCATTGGAGGATGTTAACGTTCTTTCAGCATGATCATCTAATGAACATTTGATTGTTAATTGTCACATTTATGAAAACCTGGTGTTTATCACTCTATTCTTGGTTGAATCTGGTGGATTTAGCTAATGGAGTCTGGTGGATATATATTATTAGGGTTTAGCAGGTTATTTTTTCTTTTCATTCTTCAAGTTCACGCCGCCTCCCACGCCCAGACCACAAATTCACGCCTCACCTCATGACTCTCAGTCTCTCGCTCTCTCATTTTCGATCGTCTCCGGCCACACCAGTCATAGATTTGGTTTTCTCCACTCCGGCCACGCCATTATCTCTACCGGCCACGCCCCTACGTGTGGCCTAAGTTCTAATTTTATGATGATTATGGCTTATGAGTAACGTTTGTGGTATTTTGAGTTTTGAGGGAGAGGTTGACATTGATTTGTTTTGGATCTTTAATAACGTAGATATGGCTTGGTTTGTGAATGTCAATTACCGTAAACCTGAATCCATTTTTTCATTTCTGCTATGGTTAGATGGTGCTGAACCGGTTCTCAGTAACTTCAGCACCAACACTGAATCAAAATTGTGGTCTAAGTTGATTCTCCAATACTTATAGGGCTTTGATTTTGCTATAGAGATAGACAGAAAATGACACTGAATTTGTGGTACCATTTAAGATAGAAATTACAATACTGTATCCCAAGCACTTCATGAGGCTTGGACTCTCCCATAGGCTTTTTACAGTCTTTGGCATGGATTCTTTTTTGGTTTATAACAAAATGTGCTACTTACTTGAAGTGTCAATTTATTACACTAAAATGGTTTGGTTTGTGCTATGCAACAAAATGGAATTTCATAGGTATTATCATATCTATGGTGATTTTGTTTCGACTCCACTTGGCCTAGAGAGTTCATTGAGGTTGCTGTCCACACACACAGACCAGATCCTAAGTAAATCACTTGGCATTGTCCCTTTGAGCGCCAAAGGAAACCTTTAAATATCCGGCTGACCTATGCAGTGGTGCAAAAATGACCATGAGGTTGGTAGGAAAATATCTTAATCTGTCGTCAATTCGTAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGCCCTGACACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTTCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGTCTCACCACCACTCGACGTGAGGCTCTAAGCCTCTATAGAGATATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCACGGAAGGAGTTTGAGGATGCACGCTTTGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGAGATTGATAAGAAGCAAGGTGGTCGAGATCAACTCTGATTTATAATATGGTAAATTCTTATCTCATCTGCTATTGCAATTGAAAATGAAGTTTGGGCTAACACTTTGTTTTGCTGTATTTGGTTCTAATTCAGTAAGAGAGTCTTTTAGATTTAAAATTATATTGAATTTGTGATTATTTTCCAGGATGACGATTGGGCTACATCAAAAAGGAATTGGATCAGTTGCTAACATATGAAGGTAAAAAGGAACGGCAATAATTGAATTAATTTTTTTCTTTCATTGGGTTGCTTGAAGTCTTTTAGACACCTGGATATTTAGTGTGCTTCACTAGACTTGACTCACAATGCTAGGGGTTAGGGGTTGATAAGATATAAAATTGATGTTTACTTAACCGTGAGATTCACAAATACGTTGGGTCAAACAATGTAAGTAGTAAGGACATGATTACAACTGCAGTCATAAGTAGTAAGGACATGATTACAACTGCAGTCATATTTATTTGGGGATCTGTCTATTGTTTGAAAGTTCATCAGCTTGATGCTTGTATTTTGTTGGAAATTGTGTTCCTACCACCCATCTTCTTTTCACCATCGCAAGAGCAAGAGGGAGAGCTAAATCTTGAAGAAGACAAAAGTGATCATAATAACAACAAAAAGTTTAGGAGCTTAAAAGATTAGAGAGCAAATAGTCAAAAGTGAACAAAATGTATATGACTGCGAAACTTGTAACTAAGAAATTGTAAGTAAGTGGACCAAGGCGGTGGAAGTTGCGAATTTCTACCAATTTCTGGTACACACACCTTTGTACTTTTTTTTAGTTCACAAAATTCAAAGAATCTACTTTACCTACTAATTTTCGGC

mRNA sequence

ATGACCATGAGGTTGGTAGGAAAATATCTTAATCTGTCGTCAATTCGTAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGCCCTGACACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTTCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGTCTCACCACCACTCGACGTGAGGCTCTAAGCCTCTATAGAGATATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCACGGAAGGAGTTTGAGGATGCACGCTTTGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGAGATTGATAAGAAGCAAGGTGGTCGAGATCAACTCTGA

Coding sequence (CDS)

ATGACCATGAGGTTGGTAGGAAAATATCTTAATCTGTCGTCAATTCGTAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGCCCTGACACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTTCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGTCTCACCACCACTCGACGTGAGGCTCTAAGCCTCTATAGAGATATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCACGGAAGGAGTTTGAGGATGCACGCTTTGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGAGATTGATAAGAAGCAAGGTGGTCGAGATCAACTCTGA

Homology

[Close]

BLAST of CSPI02G16840 vs. TrEMBL
Match: A0A0A0LMK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346590 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 7.1e-82
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 1


Query: 1   MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60
           MTMRLVGKYLNLSSI KNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK
Sbjct: 1   MTMRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60

Query: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPE 120
           LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDAR ESDPE
Sbjct: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPE 120

Query: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 159
           MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
Sbjct: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158

[Close]

BLAST of CSPI02G16840 vs. TrEMBL
Match: A0A061FEJ8_THECC (LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_034295 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.0e-53
Identity = 107/144 (74.31%), Postives = 126/144 (87.50%), Query Frame = 1


Query: 17  KNFLTCSK------IGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTT 76
           +N   C K      + F  R LHNGPDTVEELLDRHVVKKEK  ++E+++L+T+RRLT+T
Sbjct: 9   RNLTICLKPVSGNDVVFIQRFLHNGPDTVEELLDRHVVKKEKSLNEEEEELLTRRRLTST 68

Query: 77  RREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIGGR 136
           RREALSLYRDILRATRFFMW DSRGVLWRDVLRENARKEFE+ARFE DPE+VTRLLIGGR
Sbjct: 69  RREALSLYRDILRATRFFMWADSRGVLWRDVLRENARKEFEEARFEKDPEVVTRLLIGGR 128

Query: 137 DAVQSALDKLAEKQREEIDKKQGG 155
           DAVQ+AL+KLAEKQR++I+K++GG
Sbjct: 129 DAVQTALEKLAEKQRQQIEKERGG 152

[Close]

BLAST of CSPI02G16840 vs. TrEMBL
Match: B9RY99_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0811430 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52
Identity = 108/156 (69.23%), Postives = 134/156 (85.90%), Query Frame = 1


Query: 1   MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60
           MT +L+ K+ N  SI  + +  S I F+ R LH+GPDTVEELLDRHVVKKEK  DDE+++
Sbjct: 19  MTTKLL-KWRN-PSISLDLINRSGIVFNLRFLHDGPDTVEELLDRHVVKKEKSLDDEEEE 78

Query: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPE 120
           L+ +RRLT+TRREAL LYRDILRATRFFMWPDS GVLWRD+LRENARKEFE+ARFE DPE
Sbjct: 79  LLNRRRLTSTRREALQLYRDILRATRFFMWPDSGGVLWRDILRENARKEFEEARFEKDPE 138

Query: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRD 157
           +VTRL+IGGR+AV+SA++KL EKQR++I+K++GG D
Sbjct: 139 VVTRLIIGGREAVESAIEKLVEKQRQQIEKERGGND 172

[Close]

BLAST of CSPI02G16840 vs. TrEMBL
Match: F6H0E1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00900 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52
Identity = 107/151 (70.86%), Postives = 128/151 (84.77%), Query Frame = 1


Query: 7   GKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRR 66
           GK  NL+ I  N +  + I    R LH GPDTVEELL+RH+VKK   +DDE+D+++T+RR
Sbjct: 4   GKCRNLA-IFLNQMIRNDIVLQRRFLHEGPDTVEELLERHIVKKGNSYDDEEDEILTRRR 63

Query: 67  LTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLL 126
           LT+TRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFE+ARFE DPE++TRLL
Sbjct: 64  LTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEEARFEKDPEIITRLL 123

Query: 127 IGGRDAVQSALDKLAEKQREEIDKKQGGRDQ 158
           IGGRDAVQSALDKL EKQ+E ++K++  RD+
Sbjct: 124 IGGRDAVQSALDKLVEKQKELVEKERRDRDR 153

[Close]

BLAST of CSPI02G16840 vs. TrEMBL
Match: W9R727_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025066 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.7e-52
Identity = 103/128 (80.47%), Postives = 120/128 (93.75%), Query Frame = 1


Query: 30  RVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFM 89
           R+LH+GPDTVEELLDRH+VKK+K  DDE+D+L  +RRLT+TRREALSLYRDILRATRFF 
Sbjct: 24  RLLHDGPDTVEELLDRHLVKKDKSVDDEEDELSARRRLTSTRREALSLYRDILRATRFFT 83

Query: 90  WPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEID 149
           WPDSRGVLWRDVLRENARKEFEDARFE+DPE+VTRL+IGGRDAVQSALDKL EKQR+EI+
Sbjct: 84  WPDSRGVLWRDVLRENARKEFEDARFETDPEIVTRLVIGGRDAVQSALDKLIEKQRQEIE 143

Query: 150 KKQGGRDQ 158
           +++ G D+
Sbjct: 144 QERSGGDR 151

[Close]

BLAST of CSPI02G16840 vs. TAIR10
Match: AT1G76060.1 (AT1G76060.1 LYR family of Fe/S cluster biogenesis protein)

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-47
Identity = 95/126 (75.40%), Postives = 108/126 (85.71%), Query Frame = 1


Query: 30  RVLHNGPDTVEELLDRHVVKKEKFFDDEDD-KLITQRRLTTTRREALSLYRDILRATRFF 89
           R LH GPDTVEELL+RH+ KKEK   D D+ + + +RRLT+TRREALSLYRDILRATRFF
Sbjct: 29  RFLHEGPDTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFF 88

Query: 90  MWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEI 149
            W DSRG LWRDVLRENARKEFE ARFE+DPE++TRLLIGG DAV SALDKLAEKQRE I
Sbjct: 89  TWIDSRGNLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREMI 148

Query: 150 DKKQGG 155
           +K++ G
Sbjct: 149 EKQRRG 154

[Close]

BLAST of CSPI02G16840 vs. NCBI nr
Match: gi|700207150|gb|KGN62269.1| (hypothetical protein Csa_2G346590 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-81
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 1


Query: 1   MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60
           MTMRLVGKYLNLSSI KNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK
Sbjct: 1   MTMRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60

Query: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPE 120
           LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDAR ESDPE
Sbjct: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPE 120

Query: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 159
           MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
Sbjct: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158

[Close]

BLAST of CSPI02G16840 vs. NCBI nr
Match: gi|778674266|ref|XP_011650175.1| (PREDICTED: uncharacterized protein LOC101214249 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 5.3e-70
Identity = 136/140 (97.14%), Postives = 136/140 (97.14%), Query Frame = 1


Query: 19  FLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLY 78
           F   SKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLY
Sbjct: 76  FAASSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLY 135

Query: 79  RDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALD 138
           RDILRATRFFMWPDSRGVLWRDVLRENARKEFEDAR ESDPEMVTRLLIGGRDAVQSALD
Sbjct: 136 RDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMVTRLLIGGRDAVQSALD 195

Query: 139 KLAEKQREEIDKKQGGRDQL 159
           KLAEKQREEIDKKQGGRDQL
Sbjct: 196 KLAEKQREEIDKKQGGRDQL 215

[Close]

BLAST of CSPI02G16840 vs. NCBI nr
Match: gi|659089585|ref|XP_008445589.1| (PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 5.1e-65
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 1


Query: 19  FLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLY 78
           F   SKIGFHPRVLHNGPDTVEELLDRHVVKKEK  DD+ DKLITQRRLT+TRREALSLY
Sbjct: 59  FAASSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLY 118

Query: 79  RDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALD 138
           RDILRATRFFMWPDS+GVLWRDVLR+NARKEFEDARFESDPE+VTRLLIGGRDAVQSALD
Sbjct: 119 RDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALD 178

Query: 139 KLAEKQREEIDKKQGGRDQL 159
           KLAEKQR+EIDKKQ GRDQL
Sbjct: 179 KLAEKQRKEIDKKQSGRDQL 198

[Close]

BLAST of CSPI02G16840 vs. NCBI nr
Match: gi|590594637|ref|XP_007017907.1| (LYR family of Fe/S cluster biogenesis protein [Theobroma cacao])

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52
Identity = 107/144 (74.31%), Postives = 126/144 (87.50%), Query Frame = 1


Query: 17  KNFLTCSK------IGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTT 76
           +N   C K      + F  R LHNGPDTVEELLDRHVVKKEK  ++E+++L+T+RRLT+T
Sbjct: 9   RNLTICLKPVSGNDVVFIQRFLHNGPDTVEELLDRHVVKKEKSLNEEEEELLTRRRLTST 68

Query: 77  RREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIGGR 136
           RREALSLYRDILRATRFFMW DSRGVLWRDVLRENARKEFE+ARFE DPE+VTRLLIGGR
Sbjct: 69  RREALSLYRDILRATRFFMWADSRGVLWRDVLRENARKEFEEARFEKDPEVVTRLLIGGR 128

Query: 137 DAVQSALDKLAEKQREEIDKKQGG 155
           DAVQ+AL+KLAEKQR++I+K++GG
Sbjct: 129 DAVQTALEKLAEKQRQQIEKERGG 152

[Close]

BLAST of CSPI02G16840 vs. NCBI nr
Match: gi|223542064|gb|EEF43608.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 108/156 (69.23%), Postives = 134/156 (85.90%), Query Frame = 1


Query: 1   MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60
           MT +L+ K+ N  SI  + +  S I F+ R LH+GPDTVEELLDRHVVKKEK  DDE+++
Sbjct: 19  MTTKLL-KWRN-PSISLDLINRSGIVFNLRFLHDGPDTVEELLDRHVVKKEKSLDDEEEE 78

Query: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPE 120
           L+ +RRLT+TRREAL LYRDILRATRFFMWPDS GVLWRD+LRENARKEFE+ARFE DPE
Sbjct: 79  LLNRRRLTSTRREALQLYRDILRATRFFMWPDSGGVLWRDILRENARKEFEEARFEKDPE 138

Query: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRD 157
           +VTRL+IGGR+AV+SA++KL EKQR++I+K++GG D
Sbjct: 139 VVTRLIIGGREAVESAIEKLVEKQRQQIEKERGGND 172

The following BLAST results are available for this feature:

BLAST of CSPI02G16840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G16840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMK5_CUCSA	7.1e-82	98.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346590 PE=3 SV=1	[more]
A0A061FEJ8_THECC	7.0e-53	74.31	LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_034295 P...	[more]
B9RY99_RICCO	1.6e-52	69.23	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0811430 PE=3 SV=1	[more]
F6H0E1_VITVI	5.9e-52	70.86	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00900 PE=3 SV=...	[more]
W9R727_9ROSA	7.7e-52	80.47	Uncharacterized protein OS=Morus notabilis GN=L484_025066 PE=3 SV=1	[more]

BLAST of CSPI02G16840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76060.1	3.9e-47	75.40	LYR family of Fe/S cluster biogenesis protein	[more]

BLAST of CSPI02G16840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207150\|gb\|KGN62269.1\|	1.0e-81	98.73	hypothetical protein Csa_2G346590 [Cucumis sativus]	[more]
gi\|778674266\|ref\|XP_011650175.1\|	5.3e-70	97.14	PREDICTED: uncharacterized protein LOC101214249 [Cucumis sativus]	[more]
gi\|659089585\|ref\|XP_008445589.1\|	5.1e-65	90.71	PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]	[more]
gi\|590594637\|ref\|XP_007017907.1\|	1.0e-52	74.31	LYR family of Fe/S cluster biogenesis protein [Theobroma cacao]	[more]
gi\|223542064\|gb\|EEF43608.1\|	2.2e-52	69.23	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008011	Complex1_LYR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G16840.1	CSPI02G16840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 72..132 score: 1.3
None	No IPR available	PANTHER	PTHR13166	PROTEIN C6ORF149	coord: 63..140 score: 4.7
None	No IPR available	PANTHER	PTHR13166:SF4	SUBFAMILY NOT NAMED	coord: 63..140 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G16840	Cla022398	Watermelon (97103) v1	cpiwmB117
CSPI02G16840	Csa2G346590	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G16840	MELO3C011341	Melon (DHL92) v3.5.1	cpimeB117
CSPI02G16840	ClCG08G014030	Watermelon (Charleston Gray)	cpiwcgB173
CSPI02G16840	Lsi08G012940	Bottle gourd (USVL1VR-Ls)	cpilsiB142
CSPI02G16840	MELO3C011341.2	Melon (DHL92) v3.6.1	cpimedB113
CSPI02G16840	CsaV3_2G024420	Cucumber (Chinese Long) v3	cpicucB081
CSPI02G16840	Cla97C08G157600	Watermelon (97103) v2	cpiwmbB167
CSPI02G16840	Bhi04G000092	Wax gourd	cpiwgoB163
CSPI02G16840	Cucsa.394010	Cucumber (Gy14) v1	cgycpiB578
CSPI02G16840	CmaCh05G003250	Cucurbita maxima (Rimu)	cmacpiB797
CSPI02G16840	CmoCh05G003280	Cucurbita moschata (Rifu)	cmocpiB785
CSPI02G16840	Cp4.1LG11g02750	Cucurbita pepo (Zucchini)	cpecpiB096
CSPI02G16840	CsGy2G016820	Cucumber (Gy14) v2	cgybcpiB057
CSPI02G16840	Carg09387	Silver-seed gourd	carcpiB0158

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G16840	Cucurbita pepo (Zucchini)	cpecpiB825
CSPI02G16840	Silver-seed gourd	carcpiB1013
CSPI02G16840	Cucurbita maxima (Rimu)	cmacpiB178
CSPI02G16840	Cucurbita moschata (Rifu)	cmocpiB163