Bhi04G000092 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G000092
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Complex 1 LYR protein
Location	chr4 : 2896462 .. 2899997 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATACCATGTTTACCCTTCCATGTCTCCCTTTCTCAGTTCTCGCGAGCTCCCCCCTTCGTCAATCTCCCTCCTCTTAAATCGCTTCTCTCTGTTTCTTCCAGTTTGTCCGATCAATCGTCCCTTCCCTCAATCTTCCTTTGCTTCGCTGCTTCAAGGTTTGTTCGTGATTTTCTTTTCCTTTGAGATTCTGTCATGTTAGGGTTGCTGAAATCACGATTAGATGTTCATTCTTGTATGATTGTTCCGTATATCTCTCTCACGGTTCCCAAATGTTATTCAATTGCAATATATTACAGAGTAATTAGCATTGAATCTTAACGTTCTTTCAGCATGAGCATCTAATGAGGATTTGGTGATTATAATTGCTGTTTTGTTTATTACTTTTGAACATTTGTGAAATGCTGGTGTTTATCACTTTATTCTAGGTTGAATACGGTGGATTTAGCCAATGGAAGTTACAATTCCTTCTGGACACTGTTTTTGTAGTTATGGATTAACAACTGTAGATTGTACTTTAGCACTATCATATTGCCAGAGGCTTGATTATTAGTTTTATTAGTTGCAGGGTATTACTTCTAGTTATAACATTCATGGTGTGGCCCAACTTCTAAATTTTGTAATAATTATACCTTATGAGTAACGTTTGTGGCATTTTGAGTTTTGAGGGAGAGGTTAAGATTAACATGTTTTGGATCTATAATAATGTAGTGTAGGTATGACTTGGTTTGTAAATGGTAATCACCGTGACTTTTCTTTAGAAAACCTGAATCCATTTTTGCATTTCTTCTAAAGCCAGTTGCATTGATTCCATGATATCATTTTATTTCGCTTGAGAACCTCAGTAACTTCAGCACCAACTCTAACTCAAGATTCTGGTCGAAGTTGATGCTCTAATTCCAATTGACAGGACCTTGATTTTGCAATAGAAATCTGACAGAAAATAACCCTGAATTTGTGGTACCATATAAGATGGAAATTACAATACTGAACTCCAAGCACTTCAAGAGGCTTGGACTCTCCCGTAGGCTTTTTACGGACTATGGTATGGTTTGGTTTGTGTTTTGCAACGAAATGGAATTCCATAGATATTATGATATTCATGGGGTTTTTGTTTCAACTTCGTGTGGCCTTTTTTCTTGGGGAGCAAAAGACATTTCCGTATATCTTTCGTAGGATTTGTATAAATCATCTTTACTGCACTTTTTCAATTCAATCTTCTTTGATGTGGTAATTGGTCATACGCTTCATACCTTTTCACTCTTCTTCTTGCATTCCCATGATCTTTTCATTGGTACCTTGCAGGAAAGTACATCTGTCAGTGTCTTGAGGCATTAATAAGCAAAGTTGTCCACAATCATGATAGAGAGTTTATTGAGGTTGCTGTCCACGCACAGACCAGATCCTAAGTAAATCGTTTGGCATTGTCCCTTTGAGCGCCAAAGGAAATATTCAAACTATCCAGTTGACCCATGCAGTGGTGCAGAGACGACCATGAGGTTGGTAGGAAAATGTCTTAACCTGTCAATTCATAAGAATTTTCTGACCTGCAATAAAATTGGTTTCCACCCTCGAGTTCTGCACAATGGTCCAGACACGGTAGCTGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTCGATGATGAAGAGGATGAGTTGATAACCCAGCGACGCCTCACCACCACTCGGCGTGAGGCTCTTAGTCTCTATAGAGACATTCTCCGGGCAACTCGGTTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGGCAGAATGCACGAAAGGAGTTTGAGGATGCCCGTTATGAGTCTGATCCAGAAATAGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAATCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAAATGGTCGAGATCAACTCTGATTTATTACATGGTAATTCTTATCTCAATTCTCACCTGCTATTGCAATTGAAAACGAAGTTAGACTAACCCTTGCTCTGTACTTGGTTCTAATGAATTGAGAGGGTATTTTACTTGTAAATTACATTGGATTTCTGATCTTTTTTCCAGGATTGACATTTGGGCTATATCAGAAAGGAACTGGATTGGTTTCTAAGAAAATGAAGGTAAAATGAAATGCAGAAATTGAATTAATTTTTTATATTGGGTTGCTGGAACTCCTTTAGCTTGTATAGACGGTGGCAATCCTGAAGTGAGTCCTTAGATGTGATGTTCTGAACTGTCAACTGCTGCACAGACGATCTAGCCTAAGTAGCTTCAAGAAATAAACCTCTTTTATTAAAGTGATAAATTGTTTCATACAAGAAGGGAAAACTCCTTAGAATTTTATGACAAGTGGGGTAAAAAGGGAATTAACTTAAAATATCACCCAGTTACCTAATTAACCCGAATCTTCTTACACCAAAAGATTTCTAAACCCACAGCCATAATTATTGGGTATCACGTATTGCTTGACAAATTCATCAGCTTTCTCTGATGTTGGTTAGTAGTAGTTCCATGTGCTCCATATCTTTAGTATTTAGTAACAAGTTCATCAATTTTTTACTTTAATGCAATATCGATCTCTGGATACCACAATGCATTATTGTTTCAAGCTATGAAGCATAGATATGGATACGTTGAAAGATGCATCATTTTTTATATATTATTTTAATATATATTTCTAAAAAATGATGATACTGATACATTGAATGTACATTTTCTCTTGTTTAAAAAAATAGATTGCCTAGTTTTAGATTGAAAAAGATTAGATGAGTTGTTTATCTTTTTTCTTTTAAAAAAGTATGTAAAAATAGATGTATCAAATCGCTCATCAAATACGTATCTGAGAAGTATCTGAAAGTACGATATCTGATACGTGTTTGATACGAATTCTTTGTCTCACATGAAGTATGTGTTTCATAGGTTTCAAGTAAGTCTAAAGGTTGCCACTGACTAGTTTTGAATGTATGATTGATTCTCTGAAGAATGTGAGGTACTTTGCTGTTTGAAATTGTGTTCCTACCTTCGGTATACTTCGTACATTTAAAGTGTAAAATTAAATATAAAATTAATTTTGAGTGATTAAAGATGTATTGGAAAATGAGTATAGCTTAATTGATAATGTTCATATATCAACCTTTAAATTAGAGATTTGATTTTCTCATCCTATATATTGCCAGGAAAAAAAGAGAGAATTTTTAAAATCACCCGTATACATGCCCTTAAATATTGAAAAAAAAATGATATTTGTGAAATCTTTTGATCAAAGAAATTTTATCTCCCCTTACCTCTCTCAGAGTCCATTCATGATTATTATTATTATTATTTTTTTTTTGTGAATAAAATTAAAGCCAATTCTTTTTTCTTTTTTGTGTTCAAGAATGGTAATTTCGGTTCATTTTCCATTTCTTTTAGAAAAATGCAAGTAATTTCAAGTTGTACTCTAAATTCGAAGTTACATCTTTATTCTTTTTAATTCAACTTTTGTACGGGTG

mRNA sequence

CGATACCATGTTTACCCTTCCATGTCTCCCTTTCTCAGTTCTCGCGAGCTCCCCCCTTCGTCAATCTCCCTCCTCTTAAATCGCTTCTCTCTGTTTCTTCCAGTTTGTCCGATCAATCGTCCCTTCCCTCAATCTTCCTTTGCTTCGCTGCTTCAAGGAAAGTACATCTGTCAGTGTCTTGAGGCATTAATAAGCAAAGTTGTCCACAATCATGATAGAGAGTTTATTGAGGTTGCTGTCCACGCACAGACCAGATCCTAAGTAAATCGTTTGGCATTGTCCCTTTGAGCGCCAAAGGAAATATTCAAACTATCCAGTTGACCCATGCAGTGGTGCAGAGACGACCATGAGGTTGGTAGGAAAATGTCTTAACCTGTCAATTCATAAGAATTTTCTGACCTGCAATAAAATTGGTTTCCACCCTCGAGTTCTGCACAATGGTCCAGACACGGTAGCTGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTCGATGATGAAGAGGATGAGTTGATAACCCAGCGACGCCTCACCACCACTCGGCGTGAGGCTCTTAGTCTCTATAGAGACATTCTCCGGGCAACTCGGTTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGGCAGAATGCACGAAAGGAGTTTGAGGATGCCCGTTATGAGTCTGATCCAGAAATAGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAATCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAAATGGTCGAGATCAACTCTGATTTATTACATGGATTGACATTTGGGCTATATCAGAAAGGAACTGGATTGGTTTCTAAGAAAATGAAGGTAAAATGAAATGCAGAAATTGAATTAATTTTTTATATTGGGTTGCTGGAACTCCTTTAGCTTGTATAGACGGTGGCAATCCTGAAGTGAGTCCTTAGATGTGATGTTCTGAACTGTCAACTGCTGCACAGACGATCTAGCCTAAGTAGCTTCAAGAAATAAACCTCTTTTATTAAAGTGATAAATTGTTTCATACAAGAAGGGAAAACTCCTTAGAATTTTATGACAAGTGGGGTAAAAAGGGAATTAACTTAAAATATCACCCAGTTACCTAATTAACCCGAATCTTCTTACACCAAAAGATTTCTAAACCCACAGCCATAATTATTGGGTATCACGTATTGCTTGACAAATTCATCAGCTTTCTCTGATGTTGGTTAGTAGTAGTTCCATGTGCTCCATATCTTTAGTATTTAGTAACAAGTTCATCAATTTTTTACTTTAATGCAATATCGATCTCTGGATACCACAATGCATTATTGTTTCAAGCTATGAAGCATAGATATGGATACGTTGAAAGATGCATCATTTTTTATATATTATTTTAATATATATTTCTAAAAAATGATGATACTGATACATTGAATGTACATTTTCTCTTGTTTAAAAAAATAGATTGCCTAGTTTTAGATTGAAAAAGATTAGATGAGTTGTTTATCTTTTTTCTTTTAAAAAAGTATGTAAAAATAGATGTATCAAATCGCTCATCAAATACGTATCTGAGAAGTATCTGAAAGTACGATATCTGATACGTGTTTGATACGAATTCTTTGTCTCACATGAAGTATGTGTTTCATAGGTTTCAAGTAAGTCTAAAGGTTGCCACTGACTAGTTTTGAATGTATGATTGATTCTCTGAAGAATGTGAGGTACTTTGCTGTTTGAAATTGTGTTCCTACCTTCGGTATACTTCGTACATTTAAAGTGTAAAATTAAATATAAAATTAATTTTGAGTGATTAAAGATGTATTGGAAAATGAGTATAGCTTAATTGATAATGTTCATATATCAACCTTTAAATTAGAGATTTGATTTTCTCATCCTATATATTGCCAGGAAAAAAAGAGAGAATTTTTAAAATCACCCGTATACATGCCCTTAAATATTGAAAAAAAAATGATATTTGTGAAATCTTTTGATCAAAGAAATTTTATCTCCCCTTACCTCTCTCAGAGTCCATTCATGATTATTATTATTATTATTTTTTTTTTGTGAATAAAATTAAAGCCAATTCTTTTTTCTTTTTTGTGTTCAAGAATGGTAATTTCGGTTCATTTTCCATTTCTTTTAGAAAAATGCAAGTAATTTCAAGTTGTACTCTAAATTCGAAGTTACATCTTTATTCTTTTTAATTCAACTTTTGTACGGGTG

Coding sequence (CDS)

ATGAGGTTGGTAGGAAAATGTCTTAACCTGTCAATTCATAAGAATTTTCTGACCTGCAATAAAATTGGTTTCCACCCTCGAGTTCTGCACAATGGTCCAGACACGGTAGCTGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTCGATGATGAAGAGGATGAGTTGATAACCCAGCGACGCCTCACCACCACTCGGCGTGAGGCTCTTAGTCTCTATAGAGACATTCTCCGGGCAACTCGGTTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGGCAGAATGCACGAAAGGAGTTTGAGGATGCCCGTTATGAGTCTGATCCAGAAATAGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAATCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAAATGGTCGAGATCAACTCTGA

Protein sequence

MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKEKSFDDEEDELITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL

Homology

[Close]

BLAST of Bhi04G000092 vs. TAIR10
Match: AT1G76060.1 (LYR family of Fe/S cluster biogenesis protein)

HSP 1 Score: 151.0 bits (380), Expect = 6.1e-37
Identity = 79/126 (62.70%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 27  RVLHNGPDTVAELLDRHVVKK-XXXXXXXXXXXXXXXXXXXXXXEALSLYRDILRATRFF 86
           R LH GPDTV ELL+RH+ KK                       EALSLYRDILRATRFF
Sbjct: 29  RFLHEGPDTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFF 88

Query: 87  MWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEI 146
            W DSRG LWRDVLR+NARKEFE AR+E+DPE++TRLLIGG DAV SALDKLAEKQ + I
Sbjct: 89  TWIDSRGNLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREMI 148

Query: 147 DKKQNG 152
           +K++ G
Sbjct: 149 EKQRRG 154

[Close]

BLAST of Bhi04G000092 vs. TrEMBL
Match: tr|A0A1S4DWJ1|A0A1S4DWJ1_CUCME (uncharacterized protein LOC103488569 OS=Cucumis melo OX=3656 GN=LOC103488569 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.1e-59
Identity = 123/156 (78.85%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXX 60
           MRLVGK LNL SI KNFL C+KIGFHPRVLHNGPDTV ELLDRHVVKK            
Sbjct: 3   MRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLI 62

Query: 61  XXXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIV 120
                     EALSLYRDILRATRFFMWPDS+GVLWRDVLRQNARKEFEDAR+ESDPEIV
Sbjct: 63  TQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIV 122

Query: 121 TRLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL 156
           TRLLIGGRDAVQSALDKLAEKQ +EIDKKQ+GRDQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL 158

[Close]

BLAST of Bhi04G000092 vs. TrEMBL
Match: tr|A0A0A0LMK5|A0A0A0LMK5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57
Identity = 142/156 (91.03%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXX 60
           MRLVGK LNL SIHKNFLTC+KIGFHPRVLHNGPDTV ELLDRHV   XXXXXXXXXXXX
Sbjct: 3   MRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVXXXXXXXXXXXXXXX 62

Query: 61  XXXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIV 120
           XXXXXXXXXX ALSLYRDILRATRFFMWPDSRGVLWRDVLR+NARKEFEDAR ESDPE+V
Sbjct: 63  XXXXXXXXXXXALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMV 122

Query: 121 TRLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL 156
           TRLLIGGRDAVQSALDKLAEKQ +EIDKKQ GRDQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158

[Close]

BLAST of Bhi04G000092 vs. TrEMBL
Match: tr|A0A1R3HYT9|A0A1R3HYT9_9ROSI (Complex 1 LYR protein OS=Corchorus olitorius OX=93759 GN=COLO4_26087 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 9.6e-45
Identity = 97/146 (66.44%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 6   KCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXXXXXXXX 65
           KC NL+IH   +  + I F  R LHNGPDTV ELLDRHVVKK                  
Sbjct: 7   KCRNLTIHLKPVFDSDIVFIQRFLHNGPDTVEELLDRHVVKKEKSLNDEEEELLTRQRLT 66

Query: 66  XXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVTRLLIG 125
               EAL+LYRDILRATRFFMWPDSRGVLWRDVLR+NARKEFEDAR+E DPE+VTRLLIG
Sbjct: 67  STRREALALYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFEKDPEVVTRLLIG 126

Query: 126 GRDAVQSALDKLAEKQMQEIDKKQNG 152
           GRDAVQSAL+KLAEKQ Q+I K+++G
Sbjct: 127 GRDAVQSALEKLAEKQRQQIAKERDG 152

[Close]

BLAST of Bhi04G000092 vs. TrEMBL
Match: tr|F6H0E1|F6H0E1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g00900 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.1e-44
Identity = 94/150 (62.67%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 5   GKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXXXXXXX 64
           GKC NL+I  N +  N I    R LH GPDTV ELL+RH+VKK                 
Sbjct: 4   GKCRNLAIFLNQMIRNDIVLQRRFLHEGPDTVEELLERHIVKKGNSYDDEEDEILTRRRL 63

Query: 65  XXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVTRLLI 124
                EALSLYRDILRATRFFMWPDSRGVLWRDVLR+NARKEFE+AR+E DPEI+TRLLI
Sbjct: 64  TSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEEARFEKDPEIITRLLI 123

Query: 125 GGRDAVQSALDKLAEKQMQEIDKKQNGRDQ 155
           GGRDAVQSALDKL EKQ + ++K++  RD+
Sbjct: 124 GGRDAVQSALDKLVEKQKELVEKERRDRDR 153

[Close]

BLAST of Bhi04G000092 vs. TrEMBL
Match: tr|A0A1R3IXU8|A0A1R3IXU8_COCAP (Complex 1 LYR protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09116 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-43
Identity = 94/146 (64.38%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 6   KCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXXXXXXXX 65
           KC +L+IH   +  + I F  R LHNGPDTV ELLDRHVVKK                  
Sbjct: 7   KCRSLTIHLKPVFDSDIVFIQRFLHNGPDTVEELLDRHVVKKEKSLNDEEEELLNRQRLT 66

Query: 66  XXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVTRLLIG 125
               EAL+LYRDI RATRFFMWPDSRGVLWRDVLR+NARKEFE+AR+E DPE+VTRLLIG
Sbjct: 67  STRREALALYRDIFRATRFFMWPDSRGVLWRDVLRENARKEFEEARFEKDPELVTRLLIG 126

Query: 126 GRDAVQSALDKLAEKQMQEIDKKQNG 152
           GRDAVQSAL+KLAEKQ Q+I K+++G
Sbjct: 127 GRDAVQSALEKLAEKQKQQISKERDG 152

[Close]

BLAST of Bhi04G000092 vs. NCBI nr
Match: XP_022144304.1 (uncharacterized protein LOC111014019 [Momordica charantia])

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 121/154 (78.57%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXXX 60
           +RLVGKCLNLSIHK+FL CNKIGFHPRVLHNGPDT+ ELLDRHVVKK             
Sbjct: 11  IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELIT 70

Query: 61  XXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVT 120
                    EALSLYRDI+RATRFFMWPDSRGVLWRDVLR+NARKEFE+ARYESDPE+VT
Sbjct: 71  QRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVT 130

Query: 121 RLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQ 155
           RLLIGGRDAVQSALDKLAEKQMQEIDKKQ+G DQ
Sbjct: 131 RLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ 164

[Close]

BLAST of Bhi04G000092 vs. NCBI nr
Match: XP_016900070.1 (PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 4.7e-59
Identity = 123/156 (78.85%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXX 60
           MRLVGK LNL SI KNFL C+KIGFHPRVLHNGPDTV ELLDRHVVKK            
Sbjct: 3   MRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLI 62

Query: 61  XXXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIV 120
                     EALSLYRDILRATRFFMWPDS+GVLWRDVLRQNARKEFEDAR+ESDPEIV
Sbjct: 63  TQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIV 122

Query: 121 TRLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL 156
           TRLLIGGRDAVQSALDKLAEKQ +EIDKKQ+GRDQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL 158

[Close]

BLAST of Bhi04G000092 vs. NCBI nr
Match: XP_022961619.1 (uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 uncharacterized protein LOC111462339 [Cucurbita moschata])

HSP 1 Score: 236.5 bits (602), Expect = 6.1e-59
Identity = 135/154 (87.66%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXXX 60
           MRLV KC+ LS HKNFL CNK+GFHPR+LHNGPDT+ ELLDRHVVK XXXXXXXXXXXXX
Sbjct: 3   MRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKXXXXXXXXXXXXXX 62

Query: 61  XXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVT 120
           XXXXX    EALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDAR+E+DPEIVT
Sbjct: 63  XXXXXSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122

Query: 121 RLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQ 155
           RLLIGGRDAVQSALDKLAEKQ QEIDKKQ+GRD+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGRDR 156

[Close]

BLAST of Bhi04G000092 vs. NCBI nr
Match: XP_023545212.1 (uncharacterized protein LOC111804691 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 134/154 (87.01%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXXX 60
           MRLV KC+ LS HKNFL CNKIG+ PR LHNGPDT+ ELLDRHVVK XXXXXXXXXXXXX
Sbjct: 3   MRLVEKCVKLSTHKNFLACNKIGYRPRALHNGPDTIDELLDRHVVKXXXXXXXXXXXXXX 62

Query: 61  XXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVT 120
           XXXXX    EALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDAR+E+DPEIVT
Sbjct: 63  XXXXXSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEIVT 122

Query: 121 RLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQ 155
           RLLIGGRDAVQSALDKLAEKQ QEIDKKQ+GRD+
Sbjct: 123 RLLIGGRDAVQSALDKLAEKQRQEIDKKQSGRDR 156

[Close]

BLAST of Bhi04G000092 vs. NCBI nr
Match: KGN62269.1 (hypothetical protein Csa_2G346590 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 142/156 (91.03%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MRLVGKCLNL-SIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKXXXXXXXXXXXX 60
           MRLVGK LNL SIHKNFLTC+KIGFHPRVLHNGPDTV ELLDRHV   XXXXXXXXXXXX
Sbjct: 3   MRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVXXXXXXXXXXXXXXX 62

Query: 61  XXXXXXXXXXEALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIV 120
           XXXXXXXXXX ALSLYRDILRATRFFMWPDSRGVLWRDVLR+NARKEFEDAR ESDPE+V
Sbjct: 63  XXXXXXXXXXXALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMV 122

Query: 121 TRLLIGGRDAVQSALDKLAEKQMQEIDKKQNGRDQL 156
           TRLLIGGRDAVQSALDKLAEKQ +EIDKKQ GRDQL
Sbjct: 123 TRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL 158

The following BLAST results are available for this feature:

BLAST of Bhi04G000092 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G000092 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76060.1	6.1e-37	62.70	LYR family of Fe/S cluster biogenesis protein	[more]

BLAST of Bhi04G000092 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DWJ1\|A0A1S4DWJ1_CUCME	3.1e-59	78.85	uncharacterized protein LOC103488569 OS=Cucumis melo OX=3656 GN=LOC103488569 PE=...	[more]
tr\|A0A0A0LMK5\|A0A0A0LMK5_CUCSA	2.2e-57	91.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=3 SV=1	[more]
tr\|A0A1R3HYT9\|A0A1R3HYT9_9ROSI	9.6e-45	66.44	Complex 1 LYR protein OS=Corchorus olitorius OX=93759 GN=COLO4_26087 PE=3 SV=1	[more]
tr\|F6H0E1\|F6H0E1_VITVI	8.1e-44	62.67	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g00900 PE=3 SV=...	[more]
tr\|A0A1R3IXU8\|A0A1R3IXU8_COCAP	2.4e-43	64.38	Complex 1 LYR protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09116 PE=3 SV...	[more]

BLAST of Bhi04G000092 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144304.1	1.3e-61	78.57	uncharacterized protein LOC111014019 [Momordica charantia]	[more]
XP_016900070.1	4.7e-59	78.85	PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]	[more]
XP_022961619.1	6.1e-59	87.66	uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 unchar...	[more]
XP_023545212.1	1.1e-57	87.01	uncharacterized protein LOC111804691 [Cucurbita pepo subsp. pepo]	[more]
KGN62269.1	3.3e-57	91.03	hypothetical protein Csa_2G346590 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008011	Complex1_LYR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000092	Bhi04M000092	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..155
None	No IPR available	PANTHER	PTHR13166	PROTEIN C6ORF149	coord: 59..150
None	No IPR available	PANTHER	PTHR13166:SF4	SUBFAMILY NOT NAMED	coord: 59..150
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 69..129 e-value: 1.3E-11 score: 44.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G000092	Csa2G346590	Cucumber (Chinese Long) v2	cuwgoB166
Bhi04G000092	MELO3C011341	Melon (DHL92) v3.5.1	mewgoB343
Bhi04G000092	ClCG08G014030	Watermelon (Charleston Gray)	wcgwgoB613
Bhi04G000092	CSPI02G16840	Wild cucumber (PI 183967)	cpiwgoB163
Bhi04G000092	Cucsa.394010	Cucumber (Gy14) v1	cgywgoB785
Bhi04G000092	CmaCh05G003250	Cucurbita maxima (Rimu)	cmawgoB0945
Bhi04G000092	CmoCh05G003280	Cucurbita moschata (Rifu)	cmowgoB0945
Bhi04G000092	Cp4.1LG11g02750	Cucurbita pepo (Zucchini)	cpewgoB0142
Bhi04G000092	MELO3C011341.2	Melon (DHL92) v3.6.1	medwgoB342
Bhi04G000092	Carg09387	Silver-seed gourd	carwgoB0173
Bhi04G000092	CsaV3_2G024420	Cucumber (Chinese Long) v3	cucwgoB173
Bhi04G000092	Cla022398	Watermelon (97103) v1	wgowmB298
Bhi04G000092	Cla97C08G157600	Watermelon (97103) v2	wgowmbB314

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G000092	Cucumber (Gy14) v2	cgybwgoB161
Bhi04G000092	Cucurbita maxima (Rimu)	cmawgoB0195
Bhi04G000092	Cucurbita moschata (Rifu)	cmowgoB0191
Bhi04G000092	Cucurbita pepo (Zucchini)	cpewgoB1029
Bhi04G000092	Bottle gourd (USVL1VR-Ls)	lsiwgoB592
Bhi04G000092	Silver-seed gourd	carwgoB1142