ClCG08G014030 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G014030
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	LYR family of Fe/S cluster biogenesis protein LENGTH=157
Location	CG_Chr08 : 26888278 .. 26890963 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTAGTTCTCGCGAGCTCCTCCCTTCGTCAATCTCTCTCCTCGAAAATCGCTTCTCTCTGTTCCTTCCAGTTTATCCGATCAATCGGCCCTTCCCTCAGTATTCCTTCGCTTCGCTGCTTCAAGGTTTGTTCATGATTTTCTTTTCCTTTGAGATTCTGTTGTGTTAGGTTGCTGAAATCGCGATTAGATGTTCATTTCTGTATTATCGTTCCCTATATCTCTCTAACAGTTCCCAAATCTTATTCCGGTGTAATAAATCACAGAGTAATTAGCATTGAACGTCAACGTTCTTTCAGCATGAGCATCTAATGAGGATTTGATGATTATAATTGCTGTTTTGTTTATTACTTTGCACTTTTGTGAAATTCTGGCGTTCATCACTTTATTCTAGGTTGAATACGGTGGATTTGGCGATTGGATGTTACAATTCCTTCTGGATACTGTTTTTGTAGTTATGGATTAACGACTGTAGATTGTATTTTAGCACTATCATATTGCTAGAGGTTTGATTATCAGTTTGATTAGTTGCAAGGTATAACTTATAGTTATAACATTGATGGTGTGGTGTGGCCGAACTTCTAAATTTCGTAATAATTATAACTTATGAATAACGTTCGTGGCATTTTGAGTTTCGATGGAGAGAGGTAAGTATTGACATGTTTTGGATCTATAATAATGTAGGTATGACTTGGTTTTTAAGTGGTAATCGCCGTATTTTTTCTTTAGAAAACCTGAATCCGTTTCTGCATTCCTTCCAAAGCCATTTGCATTGATCCATGATATATTTTATTTCGCATGAGAACCTCAGTAACTTCAGCACCAACTCTAAATCAAGATTCTGGTAAAAGTTGATGCTCTAATGCCAATTGATAGGACCTTGATTTTGCAAGAGAATTCTGACAGAAAATAACACCGAGTTTGTGTTACCATGTTAGATGGAAATTACCCTACTGAACCCCAAGCACTTCAAGATGCTTGGACTCCCCCATAGGCTTTTTAGAGACTATGATATGGCTTTTTGGTTGGTAAAAAATGTTCTACTTACATGAAGTGTCAATTTATTTCGCTAAAATTGTTTGGTTTGTGCTGTGCAACTAAATGGAATTTCATAGGTATTATGATATCCATGGAGATCTTTTTTCGACTCCATGTGGCCTTTTCCTTGGGGAGCAAATGACATTTCCGTATATCGTTCACAGAATTTGTATAAACTATTTTTCGTGCACTTCCTCAATTCAACCTGCCTTTTCACTCTTCTTCTTGCCTTCCCATGATCTTTCCGTTGGTACTTTGCAGGAAAGTACATCTGTCAGTGTCTTGAGGCATTAGTACTATAAGCAAAGTTGTTCACAATCATGATAGAGTTTATTGAGGTTGCTGTCCACACACAGACCAGATCCTAAGTAAATCATTCGAAATTGTCCCTTTGAGCGCCAAAGGACATATTTAAGTCATCCAGTTGACCTATGCAGTGGTGCAGAGATGACCATGAGGTTGGTAGGAAAATGTCTTAACCTTTCAATTCATAAAAATTTTCTGACTTGCTATCAAATTGGTTTCCACCCTCGAGCTCTGCATAATGGTCCAGACACAATAGATGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTCGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACCCGACGTGAGGCTCTAAGTCTCTACAGAGACATTCTCCGGGCAACTCGATTCTTTATGTGGGCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTTCGGCAGAATGCACGGAAGGAGTTTGAGGATGCTCGCTATGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGGGATGCAGTGCAGTCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAAGTGGTCGAGATCAACTCTGATTTATTATATGGTAATTCAGTAATTCTTGTCGCATCTGCTATTGCAATTGAAAAGGAAGTTGGGCTAGCACTTTGTTCTGTATTTGGTTCTAATGAATCGAAAGGGTATTTTACTTATAAATTACATTGGAGTTCTGATCTTTTTCCAGGATGACATTGGGCTTTATCAGAAAGGAATTGAACTGGTTGCTAAGAAAATGAAGGTGAAAGGAAAGGCAGAAATTGAACTCGTCTTTTATGTTGGGTTGCTTGAACTCTTTTAGCTTGTATAGACGTGGCTATCCTGAAGCGAGTGCTTAAATGTGGATCTTCTAAACTCTCAACTGCAGGACAGATACTACACCATTTATTAGGGATCGTCTATTGCTTGACACTTCATCAGCTCGATCTCTGATGTTGGTTGGTAGCAACTCATGCCCTCCATATCTTTAGTAATGAGTCATCAACTTATGACTTAATTTAATATTTATCGCCGTATACCACAATGCATCATTGTTTTCGGGTAAGTCAAAAGGTTGGCAGTGACCCAATTTTGAATGTGGGATTCTCTGAATAATCCGAGCTGTACTTTGCTGTTTGGGGAAAAATTCTAGTGCTACGGTAGCACTAGAAATTTCCTCGCTGTTTGGAATTATGTTCCTACCACCCGTATACTTGGCCTTCCCTAGTTACTCACCCACTCTAGCTGCAGTTTAGGGCTCCTTGGAAAATGAGTTTACCCTGAG

mRNA sequence

ATTTTTTAGTTCTCGCGAGCTCCTCCCTTCGTCAATCTCTCTCCTCGAAAATCGCTTCTCTCTGTTCCTTCCAGTTTATCCGATCAATCGGCCCTTCCCTCAGTATTCCTTCGCTTCGCTGCTTCAAGTGGTGCAGAGATGACCATGAGGTTGGTAGGAAAATGTCTTAACCTTTCAATTCATAAAAATTTTCTGACTTGCTATCAAATTGGTTTCCACCCTCGAGCTCTGCATAATGGTCCAGACACAATAGATGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTCGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACCCGACGTGAGGCTCTAAGTCTCTACAGAGACATTCTCCGGGCAACTCGATTCTTTATGTGGGCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTTCGGCAGAATGCACGGAAGGAGTTTGAGGATGCTCGCTATGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGGGATGCAGTGCAGTCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAATAATTCTTGTCGCATCTGCTATTGCAATTGAAAAGGAAGTTGGGCTAGCACTTTGTTCTGATGACATTGGGCTTTATCAGAAAGGAATTGAACTGGTTGCTAAGAAAATGAAGGTGAAAGGAAAGGCAGAAATTGAACTCGTCTTTTATGTTGGGTTGCTTGAACTCTTTTAGCTTGTATAGACGTGGCTATCCTGAAGCGAGTGCTTAAATGTGGATCTTCTAAACTCTCAACTGCAGGACAGATACTACACCATTTATTAGGGATCGTCTATTGCTTGACACTTCATCAGCTCGATCTCTGATGTTGGTTGGTAGCAACTCATGCCCTCCATATCTTTAGTAATGAGTCATCAACTTATGACTTAATTTAATATTTATCGCCGTATACCACAATGCATCATTGTTTTCGGGTAAGTCAAAAGGTTGGCAGTGACCCAATTTTGAATGTGGGATTCTCTGAATAATCCGAGCTGTACTTTGCTGTTTGGGGAAAAATTCTAGTGCTACGGTAGCACTAGAAATTTCCTCGCTGTTTGGAATTATGTTCCTACCACCCGTATACTTGGCCTTCCCTAGTTACTCACCCACTCTAGCTGCAGTTTAGGGCTCCTTGGAAAATGAGTTTACCCTGAG

Coding sequence (CDS)

ATGACCATGAGGTTGGTAGGAAAATGTCTTAACCTTTCAATTCATAAAAATTTTCTGACTTGCTATCAAATTGGTTTCCACCCTCGAGCTCTGCATAATGGTCCAGACACAATAGATGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTCGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACCCGACGTGAGGCTCTAAGTCTCTACAGAGACATTCTCCGGGCAACTCGATTCTTTATGTGGGCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTTCGGCAGAATGCACGGAAGGAGTTTGAGGATGCTCGCTATGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGGGATGCAGTGCAGTCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAATAATTCTTGTCGCATCTGCTATTGCAATTGAAAAGGAAGTTGGGCTAGCACTTTGTTCTGATGACATTGGGCTTTATCAGAAAGGAATTGAACTGGTTGCTAAGAAAATGAAGGTGAAAGGAAAGGCAGAAATTGAACTCGTCTTTTATGTTGGGTTGCTTGAACTCTTTTAG

Protein sequence

MTMRLVGKCLNLSIHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQIILVASAIAIEKEVGLALCSDDIGLYQKGIELVAKKMKVKGKAEIELVFYVGLLELF

Homology

[Close]

BLAST of ClCG08G014030 vs. TrEMBL
Match: A0A0A0LMK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346590 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-70
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 1


Query: 1   MTMRLVGKCLNLS-IHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDE 60
           MTMRLVGK LNLS IHKNFLTC +IGFHPR LHNGPDT++ELLDRHVVKKEK FDDEDD+
Sbjct: 1   MTMRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60

Query: 61  LITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPE 120
           LITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRDVLR+NARKEFEDAR ESDPE
Sbjct: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPE 120

Query: 121 MVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 152
           MVTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ
Sbjct: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQ 152

[Close]

BLAST of ClCG08G014030 vs. TrEMBL
Match: A0A061FEJ8_THECC (LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_034295 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.3e-54
Identity = 107/144 (74.31%), Postives = 129/144 (89.58%), Query Frame = 1


Query: 8   KCLNLSIHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLT 67
           KC NL+I    ++   + F  R LHNGPDT++ELLDRHVVKKEKS ++E++EL+T+RRLT
Sbjct: 7   KCRNLTICLKPVSGNDVVFIQRFLHNGPDTVEELLDRHVVKKEKSLNEEEEELLTRRRLT 66

Query: 68  STRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIG 127
           STRREALSLYRDILRATRFFMWADSRGVLWRDVLR+NARKEFE+AR+E DPE+VTRLLIG
Sbjct: 67  STRREALSLYRDILRATRFFMWADSRGVLWRDVLRENARKEFEEARFEKDPEVVTRLLIG 126

Query: 128 GRDAVQSALDKLAEKQMQEIDKKQ 152
           GRDAVQ+AL+KLAEKQ Q+I+K++
Sbjct: 127 GRDAVQTALEKLAEKQRQQIEKER 150

[Close]

BLAST of ClCG08G014030 vs. TrEMBL
Match: F6H0E1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00900 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.1e-53
Identity = 103/145 (71.03%), Postives = 124/145 (85.52%), Query Frame = 1


Query: 7   GKCLNLSIHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRL 66
           GKC NL+I  N +    I    R LH GPDT++ELL+RH+VKK  S+DDE+DE++T+RRL
Sbjct: 4   GKCRNLAIFLNQMIRNDIVLQRRFLHEGPDTVEELLERHIVKKGNSYDDEEDEILTRRRL 63

Query: 67  TSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLI 126
           TSTRREALSLYRDILRATRFFMW DSRGVLWRDVLR+NARKEFE+AR+E DPE++TRLLI
Sbjct: 64  TSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEEARFEKDPEIITRLLI 123

Query: 127 GGRDAVQSALDKLAEKQMQEIDKKQ 152
           GGRDAVQSALDKL EKQ + ++K++
Sbjct: 124 GGRDAVQSALDKLVEKQKELVEKER 148

[Close]

BLAST of ClCG08G014030 vs. TrEMBL
Match: A0A068UFL1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024581001 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-50
Identity = 97/130 (74.62%), Postives = 120/130 (92.31%), Query Frame = 1


Query: 22  YQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLTSTRREALSLYRDIL 81
           +Q   H R LH+GPDT++ELLDRHVVKKE+S DD+++EL+T++RLTSTRREALSLYRDI+
Sbjct: 19  HQPNSHLRLLHHGPDTVEELLDRHVVKKERSLDDDENELLTRQRLTSTRREALSLYRDII 78

Query: 82  RATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALDKLAE 141
           RA+RFFMW DSRGVLWRDVLR+NARKEFE+AR+E DPE++TRLLIGGRDAVQ+ALDKL E
Sbjct: 79  RASRFFMWPDSRGVLWRDVLRENARKEFEEARFEKDPEIITRLLIGGRDAVQAALDKLVE 138

Query: 142 KQMQEIDKKQ 152
           KQ Q+I+K++
Sbjct: 139 KQKQQIEKER 148

[Close]

BLAST of ClCG08G014030 vs. TrEMBL
Match: W9R727_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025066 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.2e-50
Identity = 99/123 (80.49%), Postives = 115/123 (93.50%), Query Frame = 1


Query: 29  RALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLTSTRREALSLYRDILRATRFFM 88
           R LH+GPDT++ELLDRH+VKK+KS DDE+DEL  +RRLTSTRREALSLYRDILRATRFF 
Sbjct: 24  RLLHDGPDTVEELLDRHLVKKDKSVDDEEDELSARRRLTSTRREALSLYRDILRATRFFT 83

Query: 89  WADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALDKLAEKQMQEID 148
           W DSRGVLWRDVLR+NARKEFEDAR+E+DPE+VTRL+IGGRDAVQSALDKL EKQ QEI+
Sbjct: 84  WPDSRGVLWRDVLRENARKEFEDARFETDPEIVTRLVIGGRDAVQSALDKLIEKQRQEIE 143

Query: 149 KKQ 152
           +++
Sbjct: 144 QER 146

[Close]

BLAST of ClCG08G014030 vs. TAIR10
Match: AT1G76060.1 (AT1G76060.1 LYR family of Fe/S cluster biogenesis protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.5e-46
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 1


Query: 29  RALHNGPDTIDELLDRHVVKKEKSFDDEDD-ELITQRRLTSTRREALSLYRDILRATRFF 88
           R LH GPDT++ELL+RH+ KKEK   D D+ E + +RRLTSTRREALSLYRDILRATRFF
Sbjct: 29  RFLHEGPDTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFF 88

Query: 89  MWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALDKLAEKQMQEI 148
            W DSRG LWRDVLR+NARKEFE AR+E+DPE++TRLLIGG DAV SALDKLAEKQ + I
Sbjct: 89  TWIDSRGNLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREMI 148

Query: 149 DKKQ 152
           +K++
Sbjct: 149 EKQR 152

[Close]

BLAST of ClCG08G014030 vs. NCBI nr
Match: gi|700207150|gb|KGN62269.1| (hypothetical protein Csa_2G346590 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 2.4e-70
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 1


Query: 1   MTMRLVGKCLNLS-IHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDE 60
           MTMRLVGK LNLS IHKNFLTC +IGFHPR LHNGPDT++ELLDRHVVKKEK FDDEDD+
Sbjct: 1   MTMRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60

Query: 61  LITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPE 120
           LITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRDVLR+NARKEFEDAR ESDPE
Sbjct: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPE 120

Query: 121 MVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 152
           MVTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ
Sbjct: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQ 152

[Close]

BLAST of ClCG08G014030 vs. NCBI nr
Match: gi|778674266|ref|XP_011650175.1| (PREDICTED: uncharacterized protein LOC101214249 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-60
Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 18  FLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLTSTRREALSLY 77
           F    +IGFHPR LHNGPDT++ELLDRHVVKKEK FDDEDD+LITQRRLT+TRREALSLY
Sbjct: 76  FAASSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLY 135

Query: 78  RDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALD 137
           RDILRATRFFMW DSRGVLWRDVLR+NARKEFEDAR ESDPEMVTRLLIGGRDAVQSALD
Sbjct: 136 RDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPEMVTRLLIGGRDAVQSALD 195

Query: 138 KLAEKQMQEIDKKQ 152
           KLAEKQ +EIDKKQ
Sbjct: 196 KLAEKQREEIDKKQ 209

[Close]

BLAST of ClCG08G014030 vs. NCBI nr
Match: gi|659089585|ref|XP_008445589.1| (PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 18  FLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLTSTRREALSLY 77
           F    +IGFHPR LHNGPDT++ELLDRHVVKKEKS DD+ D+LITQRRLTSTRREALSLY
Sbjct: 59  FAASSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLY 118

Query: 78  RDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALD 137
           RDILRATRFFMW DS+GVLWRDVLRQNARKEFEDAR+ESDPE+VTRLLIGGRDAVQSALD
Sbjct: 119 RDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALD 178

Query: 138 KLAEKQMQEIDKKQ 152
           KLAEKQ +EIDKKQ
Sbjct: 179 KLAEKQRKEIDKKQ 192

[Close]

BLAST of ClCG08G014030 vs. NCBI nr
Match: gi|590594637|ref|XP_007017907.1| (LYR family of Fe/S cluster biogenesis protein [Theobroma cacao])

HSP 1 Score: 218.8 bits (556), Expect = 9.1e-54
Identity = 107/144 (74.31%), Postives = 129/144 (89.58%), Query Frame = 1


Query: 8   KCLNLSIHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRLT 67
           KC NL+I    ++   + F  R LHNGPDT++ELLDRHVVKKEKS ++E++EL+T+RRLT
Sbjct: 7   KCRNLTICLKPVSGNDVVFIQRFLHNGPDTVEELLDRHVVKKEKSLNEEEEELLTRRRLT 66

Query: 68  STRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIG 127
           STRREALSLYRDILRATRFFMWADSRGVLWRDVLR+NARKEFE+AR+E DPE+VTRLLIG
Sbjct: 67  STRREALSLYRDILRATRFFMWADSRGVLWRDVLRENARKEFEEARFEKDPEVVTRLLIG 126

Query: 128 GRDAVQSALDKLAEKQMQEIDKKQ 152
           GRDAVQ+AL+KLAEKQ Q+I+K++
Sbjct: 127 GRDAVQTALEKLAEKQRQQIEKER 150

[Close]

BLAST of ClCG08G014030 vs. NCBI nr
Match: gi|225459752|ref|XP_002285899.1| (PREDICTED: uncharacterized protein LOC100247165 [Vitis vinifera])

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-52
Identity = 103/145 (71.03%), Postives = 124/145 (85.52%), Query Frame = 1


Query: 7   GKCLNLSIHKNFLTCYQIGFHPRALHNGPDTIDELLDRHVVKKEKSFDDEDDELITQRRL 66
           GKC NL+I  N +    I    R LH GPDT++ELL+RH+VKK  S+DDE+DE++T+RRL
Sbjct: 4   GKCRNLAIFLNQMIRNDIVLQRRFLHEGPDTVEELLERHIVKKGNSYDDEEDEILTRRRL 63

Query: 67  TSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLI 126
           TSTRREALSLYRDILRATRFFMW DSRGVLWRDVLR+NARKEFE+AR+E DPE++TRLLI
Sbjct: 64  TSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEEARFEKDPEIITRLLI 123

Query: 127 GGRDAVQSALDKLAEKQMQEIDKKQ 152
           GGRDAVQSALDKL EKQ + ++K++
Sbjct: 124 GGRDAVQSALDKLVEKQKELVEKER 148

The following BLAST results are available for this feature:

BLAST of ClCG08G014030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMK5_CUCSA	1.7e-70	90.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346590 PE=3 SV=1	[more]
A0A061FEJ8_THECC	6.3e-54	74.31	LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_034295 P...	[more]
F6H0E1_VITVI	9.1e-53	71.03	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00900 PE=3 SV=...	[more]
A0A068UFL1_COFCA	1.1e-50	74.62	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024581001 PE=3 SV=1	[more]
W9R727_9ROSA	3.2e-50	80.49	Uncharacterized protein OS=Morus notabilis GN=L484_025066 PE=3 SV=1	[more]

BLAST of ClCG08G014030 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76060.1	2.5e-46	72.58	LYR family of Fe/S cluster biogenesis protein	[more]

BLAST of ClCG08G014030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207150\|gb\|KGN62269.1\|	2.4e-70	90.13	hypothetical protein Csa_2G346590 [Cucumis sativus]	[more]
gi\|778674266\|ref\|XP_011650175.1\|	2.2e-60	88.06	PREDICTED: uncharacterized protein LOC101214249 [Cucumis sativus]	[more]
gi\|659089585\|ref\|XP_008445589.1\|	2.5e-59	86.57	PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]	[more]
gi\|590594637\|ref\|XP_007017907.1\|	9.1e-54	74.31	LYR family of Fe/S cluster biogenesis protein [Theobroma cacao]	[more]
gi\|225459752\|ref\|XP_002285899.1\|	1.3e-52	71.03	PREDICTED: uncharacterized protein LOC100247165 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008011	Complex1_LYR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G014030.1	ClCG08G014030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 71..131 score: 2.4
None	No IPR available	PANTHER	PTHR13166	PROTEIN C6ORF149	coord: 62..139 score: 4.1
None	No IPR available	PANTHER	PTHR13166:SF4	SUBFAMILY NOT NAMED	coord: 62..139 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G014030	Csa2G346590	Cucumber (Chinese Long) v2	cuwcgB170
ClCG08G014030	MELO3C011341	Melon (DHL92) v3.5.1	mewcgB299
ClCG08G014030	Cla022398	Watermelon (97103) v1	wcgwmB400
ClCG08G014030	Cla97C08G157600	Watermelon (97103) v2	wcgwmbB336
ClCG08G014030	Bhi04G000092	Wax gourd	wcgwgoB613
ClCG08G014030	CSPI02G16840	Wild cucumber (PI 183967)	cpiwcgB173
ClCG08G014030	Cucsa.394010	Cucumber (Gy14) v1	cgywcgB675
ClCG08G014030	CmaCh05G003250	Cucurbita maxima (Rimu)	cmawcgB712
ClCG08G014030	CmoCh05G003280	Cucurbita moschata (Rifu)	cmowcgB716
ClCG08G014030	Cp4.1LG11g02750	Cucurbita pepo (Zucchini)	cpewcgB125
ClCG08G014030	MELO3C011341.2	Melon (DHL92) v3.6.1	medwcgB292
ClCG08G014030	Carg09387	Silver-seed gourd	carwcgB0137
ClCG08G014030	CsaV3_2G024420	Cucumber (Chinese Long) v3	cucwcgB177

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G014030	Cucumber (Gy14) v2	cgybwcgB156
ClCG08G014030	Cucumber (Gy14) v2	cgybwcgB471
ClCG08G014030	Cucumber (Gy14) v2	cgybwcgB530
ClCG08G014030	Melon (DHL92) v3.6.1	medwcgB545
ClCG08G014030	Silver-seed gourd	carwcgB0401
ClCG08G014030	Silver-seed gourd	carwcgB0958
ClCG08G014030	Cucumber (Chinese Long) v3	cucwcgB532
ClCG08G014030	Watermelon (97103) v2	wcgwmbB317
ClCG08G014030	Watermelon (97103) v2	wcgwmbB324
ClCG08G014030	Wax gourd	wcgwgoB641
ClCG08G014030	Watermelon (Charleston Gray)	wcgwcgB137
ClCG08G014030	Cucumber (Gy14) v1	cgywcgB031
ClCG08G014030	Cucurbita maxima (Rimu)	cmawcgB169
ClCG08G014030	Cucurbita moschata (Rifu)	cmowcgB161
ClCG08G014030	Cucurbita moschata (Rifu)	cmowcgB601
ClCG08G014030	Wild cucumber (PI 183967)	cpiwcgB539
ClCG08G014030	Wild cucumber (PI 183967)	cpiwcgB598
ClCG08G014030	Cucumber (Chinese Long) v2	cuwcgB512
ClCG08G014030	Melon (DHL92) v3.5.1	mewcgB547
ClCG08G014030	Watermelon (97103) v1	wcgwmB420
ClCG08G014030	Watermelon (97103) v1	wcgwmB422
ClCG08G014030	Cucurbita pepo (Zucchini)	cpewcgB748
ClCG08G014030	Bottle gourd (USVL1VR-Ls)	lsiwcgB151
ClCG08G014030	Bottle gourd (USVL1VR-Ls)	lsiwcgB438