CmoCh04G026490 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G026490
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRing finger protein, putative
LocationCmo_Chr04 : 19264028 .. 19267628 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAACTTCCCTTTTTTTTTTTTTTTTTTTTTTGCGTTCCCGATTTGTGTTCGAGCGTGTTCTTGAAATGATTCATCATGGGAATCGGTTTTCGTTCTAGTTTTGGCGTGAATGCGATTAGAATCACTCCTTTCGTGGTTGAATTTGCTGAAGTTCGCGCGATTTTAGTTCGCAATAGAAGAGAAATTTGAGGTTTCGATTAGTGCAGAAAGGGAGATTTGATTTGAGGAGAAGAGGTTATTTGGAGAATGATGTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTTTGCACGAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGGTGAGCTTGTTCTTCTCATATTTAGTTTGCTTCTAGATTTGATATATACATATATACATTTCATATGCTGATTCATGAGCCATATTTCTCACTAGAAACTGGATTTGATTGCCTCTCTGCACTATAGTTCTTGCATTTCTGCAAATTGAATGTAGTTTCACCATTCATTTCATACGGTTGTTTTACTCCGTTCTGATATGCTGTAAGAGACTACTAAAAAAGGCGAAACTCATGCGTTTTTAGAGATTGTTACATATAATTTTGTTCTATGATTAGCTAGTTGGTGAGACAATAGCTTACCAAGGCACATGGTTAATGTTTGATCTCAGATGACTCGGCCTACACTTCGATACACTTAGATCCAAAGCCATTTGAATTTGAAAGCAATCAAAATAAAAAGTGGAAGAACCACCGGACCTATTATTGACCCATATATCGTGATATCATGTTAGCTCGGTTGTCTCTCTTTTGTAGGTCTGCTAATGCATTTTTAGTAGCCTTTTTGCATTGTCACTTTTAGTCAACTACTGATGAATTGGGAGAGGTTAGACAGGAACAAAAAGGGTCTCTGAATACTCAATTCTTGTTTGTTCTTATAGGCAGTTCTTTTTAGTTCTTTTTCCCATGCTTTACGCTGATTCATTTGTGGACGCCTCTTTATTTACACAATGAATTTCCTCGTTGCAGCTCGAACGGGGACAACACGGTGTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAGTATAGTGATGAATACTTCTCATCCATGAGAAATGCTCAGTATGTTCTCCTTCATTTCACAGTTTCTCACAGCGTTGGTTTCATGATTTCTCTAGAAAATCTCTTTATCTGATATATATATCACGAATCATAAATTGCCTCCAGATGGGCAGTGACATATGATGATATTTGTTTCCTCTGGATAAGATTGGATAAGATTCTATTATGGTGTCTCTTTAATGTAAAGTATACTAGTTTTATCTGTAATGGCCTAAAGCAGACAATCTCTGCTAGTGGTGTGTTTGAGCTTTTACAAATGGTATCAGAGCCAGACACTGAACGGTATGCCAGTGAGGACACTGGGCCTAAAGAAGGTGGATTTTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTTCCTAACAAACGCGTTTTAAAACTGTGAGGCGGACGACGATATGTAACGGTCCAAAACAGACAATATCTGCTAACAGTATGCTTGAGCTGTTACATTATCAAGGAATAGAAAGCGAATGAGGACTAAGTGCTTTACCCAAGGGAGTATGATGAGGTTAAAATGAATTGATCATGTAGTTGATTGGTTTTTCCCTAAGCATAATCATTTGTGAATATTGAGTGGTAGGATGAGGTGTCACAAGCCAGATATTTAGCCGTCACACTGTTCAGGTGGAAAAGCAAAAAGGAGGAACAAACAGGTTGGGCCATGTTGGTATTGCTTGTGAGAGTGATTGATGGCCTCTTGAATAAATATCTTTAAAAGTTTGTAGAATGGTGATTCTTTTATGAGATATTTTGGTAAGTTGGCTTCAAACATAGTTTTAATCAGCCTGGGCCCTTAGCAATAGATGAGGAAAAAGGAGTTACTAGTTAAATCTCGTACGGTTTGGAACGAACGCTACTATGTTAATGTAGTGTCACTCTCTCTCTCTCAAATACATCTACTAGTTGTTGTAAATATCTTTCCCATCGTGCTCGAGAACCTCTTCTATTAGTTCATGTATGGTTAAGGAAAAGATAGAGGCAAAGCTCGAACTCGATAACCACCTATTCTCTTCCCCTGCCAAAAGATGCCCTGCTCCCCTCTTGCTACTGTATTTAACCATGTTTACAGAACTGTATCTCACTCGTATCTCTCTAATGAACCTCTTAATTAAATGGGTCTCACTTATACCAGATGTCTTGTAACAACCCAAGTTCACCGCTAGAAGATATTGTTTGCTTTGACCTATTTTGTATCGCTGTTAGCCTTATGGTCTTAAAATGCATCTGTTAGGGAGAGGTTTTCACACTTTTATAAAGAATGTTTCGTTCCCATCTCCAACCGACGTGGGATCTCACGTGCCCTCTCCCTTACTCACAGATCAAGCCTCATTAGCTCTCCCCCCTTTCCTACCATACACCTCCAAAATAGGACCTCTGTTTGGCACTTTAGGGAGGTTAAGTTCTCCTTTCTCTTCAGTTTCTGATGGCGCTGTTGAAAACATGAGGCAAGAGAATAGGCTGCCCACAGCTGAAATAGGGCTATAGGACGTAATCTTATAGTTTATATGCTTTGGTCAATTAAACTAAGTTTTGAAAATCTAATACCGACCGATTGGTGACGTTAGCAACGTGTAAAAGGTATCATGAAAACATAAGCATGGTGATGTTTCTTCTCCTTCTGTGTTTTAGTAATGGCTTCCTCTCTAGTACCATTCTTGTATCGGTACGAAAAAGTTGAAGGAATAAGACGATTCAAAACCGAGCTTAATGGTTTGTTTCTGTGTTTAAAATGGCAGATGCACAGTTTGCTTAGCAGATTATAACAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCATGTGACCTGCATAGACATATGGCTGCATCGGCACTCAACATGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGACAAGAAACGAACATTACAACCCTTGTTTAGTTCAGCCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCTTATCCCTGCCATGGGTTCCCATTAAGCGACCATGAAAACACTGGGTTGGAACCAATCCAAGAGAACCAGGCTAACGGAGCAGCGGATCCGATAGAGAATGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGAGAGTTTCTCTGTGGTTGGTTTGTGATAGGAGTTTGGATTGGTAAGAGAGCTGTGTCCCAAAAGTAGATGTCCTTAGCTATCTATCTGCTTAGAAAGGTTGTCTGTCTTGTTATTTACCACTGTACATAAGTCTTGCTTGTAGTGAACTAATCTGTTGCTGGTTTGAGCAGTTTTGTTACTTTTCTTCTGCACAACATTAAGTACACCATGAACCCCCTTTTATACGTTACGTCTAC

mRNA sequence

ATTAAACTTCCCTTTTTTTTTTTTTTTTTTTTTTGCGTTCCCGATTTGTGTTCGAGCGTGTTCTTGAAATGATTCATCATGGGAATCGGTTTTCGTTCTAGTTTTGGCGTGAATGCGATTAGAATCACTCCTTTCGTGGTTGAATTTGCTGAAGTTCGCGCGATTTTAGTTCGCAATAGAAGAGAAATTTGAGGTTTCGATTAGTGCAGAAAGGGAGATTTGATTTGAGGAGAAGAGGTTATTTGGAGAATGATGTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTTTGCACGAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGCTCGAACGGGGACAACACGGTGTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAGTATAGTGATGAATACTTCTCATCCATGAGAAATGCTCAATGCACAGTTTGCTTAGCAGATTATAACAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCATGTGACCTGCATAGACATATGGCTGCATCGGCACTCAACATGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGACAAGAAACGAACATTACAACCCTTGTTTAGTTCAGCCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCTTATCCCTGCCATGGGTTCCCATTAAGCGACCATGAAAACACTGGGTTGGAACCAATCCAAGAGAACCAGGCTAACGGAGCAGCGGATCCGATAGAGAATGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGAGAGTTTCTCTGTGGTTGGTTTGTGATAGGAGTTTGGATTGGTAAGAGAGCTGTGTCCCAAAAGTAGATGTCCTTAGCTATCTATCTGCTTAGAAAGGTTGTCTGTCTTGTTATTTACCACTGTACATAAGTCTTGCTTGTAGTGAACTAATCTGTTGCTGGTTTGAGCAGTTTTGTTACTTTTCTTCTGCACAACATTAAGTACACCATGAACCCCCTTTTATACGTTACGTCTAC

Coding sequence (CDS)

ATGATGTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTTTGCACGAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGCTCGAACGGGGACAACACGGTGTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAGTATAGTGATGAATACTTCTCATCCATGAGAAATGCTCAATGCACAGTTTGCTTAGCAGATTATAACAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCATGTGACCTGCATAGACATATGGCTGCATCGGCACTCAACATGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGACAAGAAACGAACATTACAACCCTTGTTTAGTTCAGCCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCTTATCCCTGCCATGGGTTCCCATTAAGCGACCATGAAAACACTGGGTTGGAACCAATCCAAGAGAACCAGGCTAACGGAGCAGCGGATCCGATAGAGAATGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGA
Homology
[Close]
BLAST of CmoCh04G026490 vs. Swiss-Prot
Match: ATL38_ARATH (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.7e-15
Identity = 44/142 (30.99%), Postives = 74/142 (52.11%), Query Frame = 1 

Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPF 67
           LV+T+I F +  + +  VC R    + +   S   F    V SR+ ++ +     G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVR----GLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRH 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH  C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRTSLREVPDKKRTLQP 145
           STCP+CR  L   P ++  L P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]
BLAST of CmoCh04G026490 vs. Swiss-Prot
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1 

Query: 60  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWL 119
           G++  V+ + P   +S E   S + A+C +CLA++++ D LR+LP CGH FHV CID WL
Sbjct: 84  GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143

Query: 120 HRHSTCPVCRTSL 133
             HS+CP CR  L
Sbjct: 144 GSHSSCPSCRQIL 156

[Close]
BLAST of CmoCh04G026490 vs. Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 46/129 (35.66%), Postives = 64/129 (49.61%), Query Frame = 1 

Query: 17  VSTLFIVFVCTRLVCARIHLN---ASRRS--FLVASRSDLSGLERGQH--GVEPFVVANF 76
           V  L  + +C  + C  +H     A RRS  F+++         RG    G++   +  F
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMF 117

Query: 77  PTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCR 136
           P   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL +H TCP CR
Sbjct: 118 PVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177

Query: 137 TSLREVPDK 139
             L E   K
Sbjct: 178 NCLVETCQK 186

[Close]
BLAST of CmoCh04G026490 vs. Swiss-Prot
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 1 

Query: 11  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVAN 70
           TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +
Sbjct: 48  TVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYF--RNRANDGSSRRG--GLDNAVVES 107

Query: 71  FPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCP 130
           FP   YS    S +  ++ +C +CL +    + +R+LP C H FH+ CID WL+ H+TCP
Sbjct: 108 FPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCP 167

Query: 131 VCRTSLREVPDK 139
           VCR++L    +K
Sbjct: 168 VCRSNLTAKSNK 175

[Close]
BLAST of CmoCh04G026490 vs. Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-14
Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 1 

Query: 60  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWL 119
           GV+  ++   P   Y       +    C VCL ++ +ED LR+LP C H+FHV CID WL
Sbjct: 99  GVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 158

Query: 120 HRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNS 159
             HSTCP+CR++L               S   SH+NL+S
Sbjct: 159 LSHSTCPLCRSNL--------------LSGFSSHHNLSS 183

[Close]
BLAST of CmoCh04G026490 vs. TrEMBL
Match: A0A0A0KB30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.1e-96
Identity = 189/225 (84.00%), Postives = 196/225 (87.11%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VVANFPTKKYSD+YFSSM+NAQCTVCLADY+SEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180
           +HSTCPVCR SLREV DKKRT+QPLFSSAIR+   LNSD    PC GFPL D EN GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 221
           PIQEN      NGAADPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 181 PIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CmoCh04G026490 vs. TrEMBL
Match: A0A061FRE6_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044140 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77
Identity = 155/227 (68.28%), Postives = 177/227 (77.97%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+S+G+NLVMTVIGFTVST+FIVFVCTRLVCARI LNASRRSF VASRSDLS LERG HG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGFHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           +EP VVANFPTKKYSDE F +  +AQCTVCL++Y+SED+LRILPYCGHSFH+TCIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDIWLQ 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSH-----YNLNSDVCAYPCHGFPLSDHEN 180
           +HSTCPVCR SLRE P+KKR +QPLFSSAIRSH     +N +S  C    HGFP   H+N
Sbjct: 121 QHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMESFNTHSCNCLLRGHGFPSRAHDN 180

Query: 181 TGLEPIQEN---QANGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
            G+ PIQEN        A+  EN S   EG+   K SR+K V SPSN
Sbjct: 181 GGMGPIQENSFASGGNGAEVGENMSQIAEGDQAIKDSRSKRVESPSN 227

[Close]
BLAST of CmoCh04G026490 vs. TrEMBL
Match: W9SEZ7_9ROSA (RING-H2 finger protein ATL32 OS=Morus notabilis GN=L484_016785 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-75
Identity = 148/225 (65.78%), Postives = 175/225 (77.78%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+SSG+NLVMTVIGF VSTLFIVFVCTRLVCARIHLNASRRSFL+ASRSDLS LERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTLFIVFVCTRLVCARIHLNASRRSFLIASRSDLSILERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           +EP V+A+FPTKKYSD +FSS  +AQCT CL +Y  +D+LRILPYCGHSFHVTCIDIWL 
Sbjct: 61  LEPVVIASFPTKKYSDAFFSSSEDAQCTACLEEYRDDDVLRILPYCGHSFHVTCIDIWLQ 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHY---NLNSDVCAYPCHGFPLSDHENTG 180
           +HSTCP+CR SLRE PD+KR +QPLFSSAIRS Y   +L+S+ C Y         H N G
Sbjct: 121 QHSTCPICRMSLRECPDRKRLMQPLFSSAIRSRYGPESLDSNSCQYILTNHEPRSHANQG 180

Query: 181 LEPIQENQ---ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
           +  ++++     +GAA+  EN SS  E NL+ K   NK+V SPSN
Sbjct: 181 VNSVEQDHITTKSGAAEAGENVSSIAEANLSPKDLENKHVESPSN 225

[Close]
BLAST of CmoCh04G026490 vs. TrEMBL
Match: M5X6C4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011047mg PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 5.8e-74
Identity = 149/225 (66.22%), Postives = 172/225 (76.44%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+SSG+NLVMTVIGF VST+FIVFVCTRLVCARIHLN SRRSF +ASRSDLS LERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFPIASRSDLSILERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VVANFPTKK+SD +FS + +AQCTVCL +Y+ +D+LRILPYCGHSFHVTCIDIWL 
Sbjct: 61  VEPVVVANFPTKKFSDAFFSVVEDAQCTVCLMEYHGDDVLRILPYCGHSFHVTCIDIWLQ 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHY---NLNSDVCAYPCHGFPLSDHENTG 180
           +HSTCPVCR SLRE P++KR +QPLFSSAIRSHY   + N+    Y  +      H+N G
Sbjct: 121 QHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGRESFNTHSYRYMLNNRGSRTHDNRG 180

Query: 181 LEPIQEN---QANGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
           ++PIQE+       AAD  ENA   TE    SK   NK V SPSN
Sbjct: 181 MDPIQEDNLPSEGDAADTRENAPPLTENIQVSKDLANKRVESPSN 225

[Close]
BLAST of CmoCh04G026490 vs. TrEMBL
Match: V4TE75_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032672mg PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.1e-72
Identity = 144/226 (63.72%), Postives = 171/226 (75.66%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+SSG+NLVMTVIGF VS +FIVFVCTRL+CARIHLN+SRRSF +ASRSDLS LERG HG
Sbjct: 1   MISSGMNLVMTVIGFAVSIMFIVFVCTRLICARIHLNSSRRSFPIASRSDLSLLERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VVANFP KK+SDEYF++  + QC VCLA+Y+ ED LRILPYCGHSFH TCIDIWLH
Sbjct: 61  VEPVVVANFPMKKFSDEYFAAAEDTQCAVCLAEYHGEDTLRILPYCGHSFHATCIDIWLH 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNS-DVCAY---PCHGFPLSDHENT 180
           +HSTCPVCR SLRE+P++KR +QP+FSSAIRSHY + S D  +Y     HGF      N 
Sbjct: 121 QHSTCPVCRVSLRELPERKRLMQPMFSSAIRSHYGIESFDTHSYNYLSGHGFSSRTVGNR 180

Query: 181 GLEPIQENQA---NGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
           G++ + E+     +   D   N S  TEGN  +K   NK+V SPSN
Sbjct: 181 GMDSVPEDHCASDDDITDSGGNISPTTEGNQTTKDLGNKHVESPSN 226

[Close]
BLAST of CmoCh04G026490 vs. TAIR10
Match: AT2G34990.1 (AT2G34990.1 RING/U-box superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 44/142 (30.99%), Postives = 74/142 (52.11%), Query Frame = 1 

Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPF 67
           LV+T+I F +  + +  VC R    + +   S   F    V SR+ ++ +     G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVR----GLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRH 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH  C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRTSLREVPDKKRTLQP 145
           STCP+CR  L   P ++  L P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]
BLAST of CmoCh04G026490 vs. TAIR10
Match: AT1G20823.1 (AT1G20823.1 RING/U-box superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.4e-16
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1 

Query: 60  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWL 119
           G++  V+ + P   +S E   S + A+C +CLA++++ D LR+LP CGH FHV CID WL
Sbjct: 84  GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143

Query: 120 HRHSTCPVCRTSL 133
             HS+CP CR  L
Sbjct: 144 GSHSSCPSCRQIL 156

[Close]
BLAST of CmoCh04G026490 vs. TAIR10
Match: AT1G49220.1 (AT1G49220.1 RING/U-box superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 46/129 (35.66%), Postives = 64/129 (49.61%), Query Frame = 1 

Query: 17  VSTLFIVFVCTRLVCARIHLN---ASRRS--FLVASRSDLSGLERGQH--GVEPFVVANF 76
           V  L  + +C  + C  +H     A RRS  F+++         RG    G++   +  F
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMF 117

Query: 77  PTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCR 136
           P   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL +H TCP CR
Sbjct: 118 PVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177

Query: 137 TSLREVPDK 139
             L E   K
Sbjct: 178 NCLVETCQK 186

[Close]
BLAST of CmoCh04G026490 vs. TAIR10
Match: AT4G40070.1 (AT4G40070.1 RING/U-box superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 1 

Query: 11  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVAN 70
           TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +
Sbjct: 48  TVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYF--RNRANDGSSRRG--GLDNAVVES 107

Query: 71  FPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCP 130
           FP   YS    S +  ++ +C +CL +    + +R+LP C H FH+ CID WL+ H+TCP
Sbjct: 108 FPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCP 167

Query: 131 VCRTSLREVPDK 139
           VCR++L    +K
Sbjct: 168 VCRSNLTAKSNK 175

[Close]
BLAST of CmoCh04G026490 vs. TAIR10
Match: AT1G35330.1 (AT1G35330.1 RING/U-box superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 1 

Query: 56  RGQHGVEPFVVANFPTKKYSDEYFSSMRNA--QCTVCLADYNSEDLLRILPYCGHSFHVT 115
           R   G+   V+ +FP+  YS      +     +C +CL ++  E+ LR++P C H+FH +
Sbjct: 95  RTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHAS 154

Query: 116 CIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDV 161
           CID+WL   STCPVCR SL   P K  + Q      IR H N + D+
Sbjct: 155 CIDVWLSSRSTCPVCRASL---PPKPGSDQNSLYPFIRPHDNQDMDL 198

[Close]
BLAST of CmoCh04G026490 vs. NCBI nr
Match: gi|659113451|ref|XP_008456580.1| (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 2.0e-96
Identity = 190/225 (84.44%), Postives = 196/225 (87.11%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VVANFPTKKY+D+YFSSMRNAQCTVCLADY+SEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180
           +HSTCPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 221
           PIQEN     ANGA DPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 181 PIQENHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CmoCh04G026490 vs. NCBI nr
Match: gi|449446273|ref|XP_004140896.1| (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 5.9e-96
Identity = 189/225 (84.00%), Postives = 196/225 (87.11%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VVANFPTKKYSD+YFSSM+NAQCTVCLADY+SEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180
           +HSTCPVCR SLREV DKKRT+QPLFSSAIR+   LNSD    PC GFPL D EN GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 221
           PIQEN      NGAADPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 181 PIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CmoCh04G026490 vs. NCBI nr
Match: gi|590566979|ref|XP_007010386.1| (RING/U-box superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 297.0 bits (759), Expect = 2.8e-77
Identity = 155/227 (68.28%), Postives = 177/227 (77.97%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+S+G+NLVMTVIGFTVST+FIVFVCTRLVCARI LNASRRSF VASRSDLS LERG HG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGFHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           +EP VVANFPTKKYSDE F +  +AQCTVCL++Y+SED+LRILPYCGHSFH+TCIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDIWLQ 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSH-----YNLNSDVCAYPCHGFPLSDHEN 180
           +HSTCPVCR SLRE P+KKR +QPLFSSAIRSH     +N +S  C    HGFP   H+N
Sbjct: 121 QHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMESFNTHSCNCLLRGHGFPSRAHDN 180

Query: 181 TGLEPIQEN---QANGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
            G+ PIQEN        A+  EN S   EG+   K SR+K V SPSN
Sbjct: 181 GGMGPIQENSFASGGNGAEVGENMSQIAEGDQAIKDSRSKRVESPSN 227

[Close]
BLAST of CmoCh04G026490 vs. NCBI nr
Match: gi|657949923|ref|XP_008345511.1| (PREDICTED: putative RING-H2 finger protein ATL61 [Malus domestica])

HSP 1 Score: 292.0 bits (746), Expect = 8.9e-76
Identity = 152/225 (67.56%), Postives = 175/225 (77.78%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+SSG+NLVMTVIGF VST+FIVFVCTRLVCARIHLN SRRSF +ASRSDLS LERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFPIASRSDLSILERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VVA FPTKKYSD +FS+  +AQCTVCLA+Y+ +D+LRILPYC HSFHVTCIDIWL 
Sbjct: 61  VEPVVVAKFPTKKYSDAFFSAAEDAQCTVCLAEYHGDDVLRILPYCEHSFHVTCIDIWLQ 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHY---NLNSDVCAYPCHGFPLSDHENTG 180
           +HSTCPVCR SLRE P++KR +QPLFSSAIRSHY   + N+    Y  +      HEN G
Sbjct: 121 QHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGTESFNTHSYRYLLNSRASRTHENHG 180

Query: 181 LEPIQENQA---NGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
           ++PIQE+ A     A D  EN+S  TE N  SK S NK+V SPSN
Sbjct: 181 MDPIQEDNAASEGDATDARENSSPLTESNQISKDSANKHVESPSN 225

[Close]
BLAST of CmoCh04G026490 vs. NCBI nr
Match: gi|703151611|ref|XP_010110165.1| (RING-H2 finger protein ATL32 [Morus notabilis])

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 148/225 (65.78%), Postives = 175/225 (77.78%), Query Frame = 1 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60
           M+SSG+NLVMTVIGF VSTLFIVFVCTRLVCARIHLNASRRSFL+ASRSDLS LERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTLFIVFVCTRLVCARIHLNASRRSFLIASRSDLSILERGLHG 60

Query: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120
           +EP V+A+FPTKKYSD +FSS  +AQCT CL +Y  +D+LRILPYCGHSFHVTCIDIWL 
Sbjct: 61  LEPVVIASFPTKKYSDAFFSSSEDAQCTACLEEYRDDDVLRILPYCGHSFHVTCIDIWLQ 120

Query: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHY---NLNSDVCAYPCHGFPLSDHENTG 180
           +HSTCP+CR SLRE PD+KR +QPLFSSAIRS Y   +L+S+ C Y         H N G
Sbjct: 121 QHSTCPICRMSLRECPDRKRLMQPLFSSAIRSRYGPESLDSNSCQYILTNHEPRSHANQG 180

Query: 181 LEPIQENQ---ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSN 220
           +  ++++     +GAA+  EN SS  E NL+ K   NK+V SPSN
Sbjct: 181 VNSVEQDHITTKSGAAEAGENVSSIAEANLSPKDLENKHVESPSN 225

The following BLAST results are available for this feature:
BLAST of CmoCh04G026490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL38_ARATH6.7e-1530.99RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2 SV=1[more]
ATL80_ARATH1.1e-1446.58RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=2 SV=1[more]
ATL10_ARATH2.0e-1435.66RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1[more]
ATL32_ARATH2.0e-1434.09RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3[more]
ATL49_ARATH4.3e-1438.38Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1[more]
BLAST of CmoCh04G026490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB30_CUCSA4.1e-9684.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G044540 PE=4 SV=1[more]
A0A061FRE6_THECC1.9e-7768.28RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044140 PE=4 S... [more]
W9SEZ7_9ROSA1.1e-7565.78RING-H2 finger protein ATL32 OS=Morus notabilis GN=L484_016785 PE=4 SV=1[more]
M5X6C4_PRUPE5.8e-7466.22Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011047mg PE=4 SV=1[more]
V4TE75_9ROSI7.1e-7263.72Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032672mg PE=4 SV=1[more]
BLAST of CmoCh04G026490 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34990.13.8e-1630.99 RING/U-box superfamily protein[more]
AT1G20823.16.4e-1646.58 RING/U-box superfamily protein[more]
AT1G49220.11.1e-1535.66 RING/U-box superfamily protein[more]
AT4G40070.11.1e-1534.09 RING/U-box superfamily protein[more]
AT1G35330.12.5e-1537.38 RING/U-box superfamily protein[more]
BLAST of CmoCh04G026490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113451|ref|XP_008456580.1|2.0e-9684.44PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo][more]
gi|449446273|ref|XP_004140896.1|5.9e-9684.00PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus][more]
gi|590566979|ref|XP_007010386.1|2.8e-7768.28RING/U-box superfamily protein isoform 1 [Theobroma cacao][more]
gi|657949923|ref|XP_008345511.1|8.9e-7667.56PREDICTED: putative RING-H2 finger protein ATL61 [Malus domestica][more]
gi|703151611|ref|XP_010110165.1|1.5e-7565.78RING-H2 finger protein ATL32 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G026490.1CmoCh04G026490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 86..129
score: 4.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 87..128
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 87..129
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 84..132
score: 2.2
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..154
score: 1.3
NoneNo IPR availablePANTHERPTHR14155:SF145RING-H2 FINGER PROTEIN ATL61-RELATEDcoord: 1..154
score: 1.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 86..135
score: 6.31

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G026490Cucsa.364780Cucumber (Gy14) v1cgycmoB1004
CmoCh04G026490CmaCh15G004790Cucurbita maxima (Rimu)cmacmoB302
CmoCh04G026490CmaCh04G025300Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G026490Cla013707Watermelon (97103) v1cmowmB663
CmoCh04G026490Csa6G044540Cucumber (Chinese Long) v2cmocuB760
CmoCh04G026490MELO3C019885Melon (DHL92) v3.5.1cmomeB667
CmoCh04G026490ClCG08G008120Watermelon (Charleston Gray)cmowcgB682
CmoCh04G026490CSPI06G03830Wild cucumber (PI 183967)cmocpiB769
CmoCh04G026490Lsi08G006580Bottle gourd (USVL1VR-Ls)cmolsiB697
CmoCh04G026490Cp4.1LG13g10060Cucurbita pepo (Zucchini)cmocpeB664
CmoCh04G026490Cp4.1LG01g24890Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G026490MELO3C019885.2Melon (DHL92) v3.6.1cmomedB754
CmoCh04G026490CsaV3_6G004100Cucumber (Chinese Long) v3cmocucB0898
CmoCh04G026490Cla97C08G150880Watermelon (97103) v2cmowmbB762
CmoCh04G026490Bhi04G001022Wax gourdcmowgoB0859
CmoCh04G026490CsGy6G003800Cucumber (Gy14) v2cgybcmoB815
CmoCh04G026490Carg04607Silver-seed gourdcarcmoB0940
CmoCh04G026490Carg02423Silver-seed gourdcarcmoB0364
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G026490CmoCh15G004870Cucurbita moschata (Rifu)cmocmoB255
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G026490Cucurbita moschata (Rifu)cmocmoB345
CmoCh04G026490Cucurbita moschata (Rifu)cmocmoB468
CmoCh04G026490Cucurbita maxima (Rimu)cmacmoB740
CmoCh04G026490Cucumber (Chinese Long) v2cmocuB727
CmoCh04G026490Melon (DHL92) v3.5.1cmomeB652
CmoCh04G026490Watermelon (Charleston Gray)cmowcgB665
CmoCh04G026490Watermelon (97103) v1cmowmB704
CmoCh04G026490Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G026490Cucurbita pepo (Zucchini)cmocpeB689
CmoCh04G026490Bottle gourd (USVL1VR-Ls)cmolsiB676
CmoCh04G026490Cucumber (Gy14) v2cgybcmoB635
CmoCh04G026490Silver-seed gourdcarcmoB1121
CmoCh04G026490Silver-seed gourdcarcmoB1136
CmoCh04G026490Watermelon (97103) v2cmowmbB741
CmoCh04G026490Wax gourdcmowgoB0894