CmaCh15G004790 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G004790
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRing finger protein, putative
LocationCma_Chr15 : 2145566 .. 2149318 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGGTGAGCATGTTTTTTTCTTGTTTAATTCGCTTCCAGATTTGATGTGGATATATCTATTTTGATTTTGTTCTAGCTAGTTAATTTTTGTTCTTGTTGGTCGCTAATTTCCCTTGGAACTCGTCTCCCTTTTTGTTACTCTTTCTAGGCTTAATTTCTGTATGTTAATTCATATGCCATAGATTTATCACTGGAAACTGGATATGATTGCCTCTCTGCATTATAGTTAAAGTGCCATCACTTCAATACTTGCTTTTCTGCCATTTTCATGTAGTTTCAGGATTCATTTCATGCTGTGGTTTTACTTCGTTTCGATTTCGCCCCCTTTTTTCGCTCTCTTTTCGGTCTGCCGGGGCCTATTTCATGTATTTGGATATGGTGTTGTTTGGTTATCTCTCTTACATAGTTCTGCTAATACGTTTTTTGTGAAACTACAGATCTCCACAATGGTACGATGTTGTCCACTTTGAGCATAAGCTCTTTTACTTTTGCTTTTGGTTTCCCCAAAAGGTCTCGTACTAGTGAAGATGTATTCCTAATCATCCTCTTAATTAGCCTACATGGGACTACTCCTTTCAATAATCCTCAACAATTCTTCCTCGAACAAAGTACACCGTAGAGCCTCCCTTGAGGTCTATCATATGGAGCTCTCGAACAACCTATCCTTAATTGAGGCTCGACTCCTTCTCTAGAGCCATCAAACAAACTACATTCTTGAGTCACTTTTTTGTTCGACACTTAAAGATTTGATTGACATGGCTAAGTTAAGGGCATGACTCTGATACCATGTTAGAAACCACGAACCTCCATAATGATATGATATTGTCCACTTTGAGCATAAGCTCTCGTAACTTTGCTTTTGGTTTCTCCAAAAGGCCTCATACTAATGAAGATGTATTCCTTACTTATAAACTCATGACATCCTCTTAATTAGCCAACGTGGACCTACTTCTATCAGTAATTCTCAACAATTTTTAAGATAGTCTTTTTGCATTGTCGTGGATTGGGAGGTTATACAGAAACAAAAAGGGTCTTTGAAAAAACTCAATTCTTGTTTGTTCTCATAGGCAGTGGTTGTGCATTCATATTTCACAATTCACATTTCTACTCCTTTTTCTTTTTAATATACTACTTTTAGACTTTGTTCAGGCTTTAGGTTGATTCGTTTATGGATATTTCTTTATTTACACGTCGAACTTCTTTGTTGCAGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAATACAGTGATGAATACTTCTCATCCATGAGAAATTCTCAGTATGTGCCCCCTTCAATTCAGTTTCTCATTTCATTGGTTTTCATGATTTTTCAAGAAATTCCCTATCATTTTAATGAAAAGCTTAATGACTTTACCAATGAAAGGAGAGAGACATGTGACTGCATGCTTTACCTATGGGAAAATGATGAGCTTGCAATGAGTTGGACTTGTAGTTGATTGGTTTTCCCATAAGTTACTAGAAATCGTGACTTTTTTATGAGACGTTTTGGTAAGTTGGCTTCAAACATAGTCCTAATCAGCCTGGGCCCTTAGCAATAGATGTCGATAGAGGCGTTATTCGTTAAAATCTCATATGGCTTGGAACAAACGATAACTTGTTATGGACATGATTCAATCATGCTCCATTAGTTTCACTCTACCTTGGAGCTTTCTGAAGATATTCTTATACAATATTGAGTTCCCTTAGCTTGAGTATACCTTAAGTGTTAAGAACTTAAAAACCCTTATGCAGATCTTCTTTGCTCCCTAGCTCTCATGAAACAACCTTTGCTTGCAGTATTTTGAATTAACTCGAGCTCGAGCTCCCTATTCTGGTTGCATTATGTTTAAAGAAACAATACATGACCAAGGGAGAACTCGAACTCCCTATTCTTTCCATTACCAGAATCCCAAATGATCAAACGATGTCTGCTCCCCTCTTGTTAACAAGCAACTGAACTAAATGAGCCCAACTCTTAAGTTCATTACAGAAGTGCTCTCCCACACTCACAGATCAAGCCTTACTACGACTTCTTCAGCCCTTCTCCTTCCATACAATTCCACTCTAGGAGGAATATTGAATCTATTGAGCTAGGTTTCAAAAGTATGCGACACCATCTTGATCATCTATGTGATCCCAGACTGATTGGTTGTAATGGCCTAATTCTACTACTAGCAGATATTGTCTTTTTTGGGCTTTCCCTCCAGGTTTTTAAAACGCGTCTGCTAGAGAGAGGTTTCCGCACCCTTATAAAAAAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACCTTGGTGATGTTAGAGAAGTGGCAGATATCATGAAATGTATGCAGGGCCGTGGATGCTATTCAAGAATTCTTCTTATAAATGGGGAGAAGTTTCTATAGAGCACCATTCCTAAATGTCTCTCTCTCTCGTAGACTCGTACTTAAATAACACAAATGGTTTCTGCTGTGCGTGACTTTGTTGTGATTCCTTAGCGGAAAAAAAGACGATATGGTATTTTGATCTGAGGAAACAAGGTGGATTTCCGAATCTAGTCCAAAAAGTGATGATATTTAAGATTGTGATTACAATTCCTTTTGGTTTTATGTGATGCTACATTCACGTTTGTTTAGCAAATCATGGAACAACACAACACAGCCAAATTAGATTCTGTTTTGAATGGCAGATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGATTTATTGCGCATTCTTCCCAACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACGAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAACACCTTGAGAACACGTCCTCGTTCATCGTCAAAGGTAACCAGAATAGTAAAAATGTAGAAAGCCCATCAAATGCTTGAACTTCCCTTAACTATGTGCTTAGAAAGATTGTCTGTCCTGTTGTTTACCATTGTGTATAAGTGCAGTTTGTAGTGAATTATTAGTTCATCTCTCTCTCTCTTATATTTGAACCAATGCATGCTGAGACGAGGCTTTTAAGTGTTCAGCTAAATTGTAGGATCAGAATCTATAATTCTGCAGGCTGCTGTTATTGTGTTTTGGAGTTTTCATGTAGTTTTCTGTGGGCTATTTAGGGCAGAACTTGACCCAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCTTCAGCTGTTGCATTAAATATGGATCCAGCTTTTGGCACCATCTTGTGGATTACAGTTGACCCTCACATGCCTTTATTATAAGCACTTACATGATAAGTTTAGATTCAAGTTGACTGTTAGCCGATTTGATATTTGATAGAACATTTATTTTTTGGGTTTTCTTTCAAGGTTTTTGAAATGTATTTATTAGGAG

mRNA sequence

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAATACAGTGATGAATACTTCTCATCCATGAGAAATTCTCAATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGATTTATTGCGCATTCTTCCCAACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACGAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAACACCTTGAGAACACGTCCTCGTTCATCGTCAAAGGTAACCAGAATAGTAAAAATGTAGAAAGCCCATCAAATGCTTGAACTTCCCTTAACTATGTGCTTAGAAAGATTGTCTGTCCTGTTGTTTACCATTGTGTATAAGTGCAGTTTGTAGTGAATTATTAGTTCATCTCTCTCTCTCTTATATTTGAACCAATGCATGCTGAGACGAGGCTTTTAAGTGTTCAGCTAAATTGTAGGATCAGAATCTATAATTCTGCAGGCTGCTGTTATTGTGTTTTGGAGTTTTCATGTAGTTTTCTGTGGGCTATTTAGGGCAGAACTTGACCCAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCTTCAGCTGTTGCATTAAATATGGATCCAGCTTTTGGCACCATCTTGTGGATTACAGTTGACCCTCACATGCCTTTATTATAAGCACTTACATGATAAGTTTAGATTCAAGTTGACTGTTAGCCGATTTGATATTTGATAGAACATTTATTTTTTGGGTTTTCTTTCAAGGTTTTTGAAATGTATTTATTAGGAG

Coding sequence (CDS)

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAATACAGTGATGAATACTTCTCATCCATGAGAAATTCTCAATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGATTTATTGCGCATTCTTCCCAACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACGAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAACACCTTGAGAACACGTCCTCGTTCATCGTCAAAGGTAACCAGAATAGTAAAAATGTAGAAAGCCCATCAAATGCTTGA

Protein sequence

MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQPIQENRRSPRTNGAAEHLENTSSFIVKGNQNSKNVESPSNA
Homology
[Close]
BLAST of CmaCh15G004790 vs. Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-15
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 1 

Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGLEPLVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLHQNLTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL Q+LTCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLRDVPDK 139
           CR  L +   K
Sbjct: 178 CRNCLVETCQK 186

[Close]
BLAST of CmaCh15G004790 vs. Swiss-Prot
Match: ATL7_ARATH (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-15
Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHV 112
           GL + +  + P+V+       Y + +   +++SQC+VCL DY +E+ L+ +P+CGH+FH+
Sbjct: 86  GLSKDIREMLPVVI-------YKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 145

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 146 ECIDLWLTSHTTCPLCRLSLIPKP 160

[Close]
BLAST of CmaCh15G004790 vs. Swiss-Prot
Match: ATL59_ARATH (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 33/84 (39.29%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ ++QC+VCL DY +E+ L+ +P+CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]
BLAST of CmaCh15G004790 vs. Swiss-Prot
Match: ATL38_ARATH (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 41/142 (28.87%), Postives = 75/142 (52.82%), Query Frame = 1 

Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFP---IASRSDLSGLERGLHGLEPL 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++ +     GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVR----GLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLHQN 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  +
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 LTCPVCRISLRDVPDKKRTMQP 145
            TCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]
BLAST of CmaCh15G004790 vs. Swiss-Prot
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1 

Query: 60  GLEPLVVANFPTKKYSDEYFSSMRNSQ--CTVCLADYHSEDLLRILPNCGHSFHVNCIDI 119
           GL+  VV  FPT  YSD     +   +  C +CL ++  ++ LR+LP C H FH +CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQNLTCPVCRISLRDVPDKKRTMQP 145
           WL  ++TCPVCR +L +   +  +++P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]
BLAST of CmaCh15G004790 vs. TrEMBL
Match: A0A0A0KB30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 9.3e-96
Identity = 185/226 (81.86%), Postives = 201/226 (88.94%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+YFSSM+N+QCTVCLADYHSEDLLRILP CGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIR+   LNSD    PC  FPLRDLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENRRSPRTNGAAEHLENTSSFIVKGNQNS-----KNVESPSNA 222
           PIQEN  +  TNGAA+ +EN S FI +GNQNS     KNVESPSNA
Sbjct: 181 PIQENHYTTGTNGAADPIENASPFI-EGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CmaCh15G004790 vs. TrEMBL
Match: A0A061FRE6_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044140 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.6e-74
Identity = 156/231 (67.53%), Postives = 179/231 (77.49%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+S+GINLVMTVIGFTVST+FIVFVCTRLVCARI LNASRRSFP+ASRSDLS LERG HG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGFHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           LEP+VVANFPTKKYSDE F +  ++QCTVCL++YHSED+LRILP CGHSFH+ CIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPC------HEFPLRDLE 180
           Q+ TCPVCR+SLR+ P+KKR MQPLFSSAIRSH+ + S    H C      H FP R  +
Sbjct: 121 QHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMES-FNTHSCNCLLRGHGFPSRAHD 180

Query: 181 NSGLDQPIQENRRSPRTNGAAEHLENTSSFIVKGNQ-----NSKNVESPSN 221
           N G+  PIQEN  +   NG AE  EN S  I +G+Q      SK VESPSN
Sbjct: 181 NGGMG-PIQENSFASGGNG-AEVGENMSQ-IAEGDQAIKDSRSKRVESPSN 227

[Close]
BLAST of CmaCh15G004790 vs. TrEMBL
Match: M5X6C4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011047mg PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.5e-72
Identity = 148/227 (65.20%), Postives = 176/227 (77.53%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSGINLVMTVIGF VST+FIVFVCTRLVCARIHLN SRRSFPIASRSDLS LERGLHG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFPIASRSDLSILERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKK+SD +FS + ++QCTVCL +YH +D+LRILP CGHSFHV CIDIWL 
Sbjct: 61  VEPVVVANFPTKKFSDAFFSVVEDAQCTVCLMEYHGDDVLRILPYCGHSFHVTCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHY---NLNSDAYAHPCHEFPLRDLENSG 180
           Q+ TCPVCRISLR+ P++KR MQPLFSSAIRSHY   + N+ +Y +  +    R  +N G
Sbjct: 121 QHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGRESFNTHSYRYMLNNRGSRTHDNRG 180

Query: 181 LDQPIQENRRSPRTNGAAEHLEN----TSSFIVKGNQNSKNVESPSN 221
           +D PIQE+   P    AA+  EN    T +  V  +  +K VESPSN
Sbjct: 181 MD-PIQED-NLPSEGDAADTRENAPPLTENIQVSKDLANKRVESPSN 225

[Close]
BLAST of CmaCh15G004790 vs. TrEMBL
Match: V4TE75_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032672mg PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-69
Identity = 138/226 (61.06%), Postives = 171/226 (75.66%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSG+NLVMTVIGF VS +FIVFVCTRL+CARIHLN+SRRSFPIASRSDLS LERGLHG
Sbjct: 1   MISSGMNLVMTVIGFAVSIMFIVFVCTRLICARIHLNSSRRSFPIASRSDLSLLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFP KK+SDEYF++  ++QC VCLA+YH ED LRILP CGHSFH  CIDIWLH
Sbjct: 61  VEPVVVANFPMKKFSDEYFAAAEDTQCAVCLAEYHGEDTLRILPYCGHSFHATCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNS-DAYAH---PCHEFPLRDLENS 180
           Q+ TCPVCR+SLR++P++KR MQP+FSSAIRSHY + S D +++     H F  R + N 
Sbjct: 121 QHSTCPVCRVSLRELPERKRLMQPMFSSAIRSHYGIESFDTHSYNYLSGHGFSSRTVGNR 180

Query: 181 GLDQPIQENRRSPR--TNGAAEHLENTSSFIVKGNQNSKNVESPSN 221
           G+D   +++  S    T+        T       +  +K+VESPSN
Sbjct: 181 GMDSVPEDHCASDDDITDSGGNISPTTEGNQTTKDLGNKHVESPSN 226

[Close]
BLAST of CmaCh15G004790 vs. TrEMBL
Match: A0A067DSW6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027163mg PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.4e-69
Identity = 138/226 (61.06%), Postives = 170/226 (75.22%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSG+NLVMTVIGF VS +FIVFVCTRL+CARIHLN+SRRSFPIASRSDLS LERGLHG
Sbjct: 1   MISSGMNLVMTVIGFAVSIMFIVFVCTRLICARIHLNSSRRSFPIASRSDLSLLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFP KK+SDEYF++  ++QC VCLA+YH ED LRILP CGHSFH  CIDIWLH
Sbjct: 61  VEPVVVANFPMKKFSDEYFAAAEDTQCAVCLAEYHGEDTLRILPYCGHSFHATCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNS-DAYAH---PCHEFPLRDLENS 180
           Q+ TCPVCR+SLR++P++KR MQP+FSSAIRSHY   S D +++     H F  R + N 
Sbjct: 121 QHSTCPVCRVSLRELPERKRLMQPIFSSAIRSHYGTESFDTHSYNYLSGHGFSSRTVVNR 180

Query: 181 GLDQPIQENRRSPR--TNGAAEHLENTSSFIVKGNQNSKNVESPSN 221
           G+D   +++  S    T+        T       +  +K+VESPSN
Sbjct: 181 GMDSVPEDHCASDDDITDSGGNISPTTEGNQTTKDLGNKHVESPSN 226

[Close]
BLAST of CmaCh15G004790 vs. TAIR10
Match: AT1G49220.1 (AT1G49220.1 RING/U-box superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 1 

Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGLEPLVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLHQNLTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL Q+LTCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLRDVPDK 139
           CR  L +   K
Sbjct: 178 CRNCLVETCQK 186

[Close]
BLAST of CmaCh15G004790 vs. TAIR10
Match: AT4G10150.1 (AT4G10150.1 RING/U-box superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHV 112
           GL + +  + P+V+       Y + +   +++SQC+VCL DY +E+ L+ +P+CGH+FH+
Sbjct: 86  GLSKDIREMLPVVI-------YKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 145

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 146 ECIDLWLTSHTTCPLCRLSLIPKP 160

[Close]
BLAST of CmaCh15G004790 vs. TAIR10
Match: AT4G10160.1 (AT4G10160.1 RING/U-box superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-16
Identity = 33/84 (39.29%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ ++QC+VCL DY +E+ L+ +P+CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]
BLAST of CmaCh15G004790 vs. TAIR10
Match: AT2G34990.1 (AT2G34990.1 RING/U-box superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-16
Identity = 41/142 (28.87%), Postives = 75/142 (52.82%), Query Frame = 1 

Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFP---IASRSDLSGLERGLHGLEPL 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++ +     GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVR----GLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLHQN 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  +
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 LTCPVCRISLRDVPDKKRTMQP 145
            TCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]
BLAST of CmaCh15G004790 vs. TAIR10
Match: AT3G05200.1 (AT3G05200.1 RING/U-box superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1 

Query: 60  GLEPLVVANFPTKKYSDEYFSSMRNSQ--CTVCLADYHSEDLLRILPNCGHSFHVNCIDI 119
           GL+  VV  FPT  YSD     +   +  C +CL ++  ++ LR+LP C H FH +CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQNLTCPVCRISLRDVPDKKRTMQP 145
           WL  ++TCPVCR +L +   +  +++P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]
BLAST of CmaCh15G004790 vs. NCBI nr
Match: gi|659113451|ref|XP_008456580.1| (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo])

HSP 1 Score: 359.0 bits (920), Expect = 6.0e-96
Identity = 185/226 (81.86%), Postives = 200/226 (88.50%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKY+D+YFSSMRN+QCTVCLADYHSEDLLRILP CGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIRS   LNSD    PC  FPLRDLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENRRSPRTNGAAEHLENTSSFIVKGNQNS-----KNVESPSNA 222
           PIQEN  +P  NGA + +EN S FI +GNQNS     KNVESPSNA
Sbjct: 181 PIQENHYTPGANGAVDPIENASPFI-EGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CmaCh15G004790 vs. NCBI nr
Match: gi|449446273|ref|XP_004140896.1| (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 185/226 (81.86%), Postives = 201/226 (88.94%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+YFSSM+N+QCTVCLADYHSEDLLRILP CGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIR+   LNSD    PC  FPLRDLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENRRSPRTNGAAEHLENTSSFIVKGNQNS-----KNVESPSNA 222
           PIQEN  +  TNGAA+ +EN S FI +GNQNS     KNVESPSNA
Sbjct: 181 PIQENHYTTGTNGAADPIENASPFI-EGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CmaCh15G004790 vs. NCBI nr
Match: gi|590566979|ref|XP_007010386.1| (RING/U-box superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 156/231 (67.53%), Postives = 179/231 (77.49%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+S+GINLVMTVIGFTVST+FIVFVCTRLVCARI LNASRRSFP+ASRSDLS LERG HG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGFHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           LEP+VVANFPTKKYSDE F +  ++QCTVCL++YHSED+LRILP CGHSFH+ CIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPC------HEFPLRDLE 180
           Q+ TCPVCR+SLR+ P+KKR MQPLFSSAIRSH+ + S    H C      H FP R  +
Sbjct: 121 QHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMES-FNTHSCNCLLRGHGFPSRAHD 180

Query: 181 NSGLDQPIQENRRSPRTNGAAEHLENTSSFIVKGNQ-----NSKNVESPSN 221
           N G+  PIQEN  +   NG AE  EN S  I +G+Q      SK VESPSN
Sbjct: 181 NGGMG-PIQENSFASGGNG-AEVGENMSQ-IAEGDQAIKDSRSKRVESPSN 227

[Close]
BLAST of CmaCh15G004790 vs. NCBI nr
Match: gi|645252150|ref|XP_008231990.1| (PREDICTED: RING-H2 finger protein ATL7-like [Prunus mume])

HSP 1 Score: 281.2 bits (718), Expect = 1.6e-72
Identity = 149/227 (65.64%), Postives = 177/227 (77.97%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSGINLVMTVIGF VST+FIVFVCTRLVCARIHLN SRRSFPIASRSDLS LERGLHG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFPIASRSDLSILERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKK+SD +FS++ +SQCTVCL +YH +D+LRILP CGHSFHV CIDIWL 
Sbjct: 61  VEPVVVANFPTKKFSDAFFSAVEDSQCTVCLMEYHGDDVLRILPYCGHSFHVTCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHY---NLNSDAYAHPCHEFPLRDLENSG 180
           Q+ TCPVCRISLR+ P++KR MQPLFSSAIRSHY   + N+ +Y +  +    R  +N G
Sbjct: 121 QHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGTESFNTHSYRYMLNNRGSRTHDNRG 180

Query: 181 LDQPIQENRRSPRTNGAAEHLEN----TSSFIVKGNQNSKNVESPSN 221
           +D PIQE+   P    AA+  EN    T +  V  +  +K VESPSN
Sbjct: 181 MD-PIQED-NLPSEGDAADTRENASPLTENIQVSKDLANKRVESPSN 225

[Close]
BLAST of CmaCh15G004790 vs. NCBI nr
Match: gi|657949923|ref|XP_008345511.1| (PREDICTED: putative RING-H2 finger protein ATL61 [Malus domestica])

HSP 1 Score: 279.6 bits (714), Expect = 4.6e-72
Identity = 149/228 (65.35%), Postives = 176/228 (77.19%), Query Frame = 1 

Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSGINLVMTVIGF VST+FIVFVCTRLVCARIHLN SRRSFPIASRSDLS LERGLHG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFPIASRSDLSILERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120
           +EP+VVA FPTKKYSD +FS+  ++QCTVCLA+YH +D+LRILP C HSFHV CIDIWL 
Sbjct: 61  VEPVVVAKFPTKKYSDAFFSAAEDAQCTVCLAEYHGDDVLRILPYCEHSFHVTCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHY---NLNSDAYAHPCHEFPLRDLENSG 180
           Q+ TCPVCRISLR+ P++KR MQPLFSSAIRSHY   + N+ +Y +  +    R  EN G
Sbjct: 121 QHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGTESFNTHSYRYLLNSRASRTHENHG 180

Query: 181 LDQPIQENRRSPRTNGAAEHLENTSSFIVKGNQNS-----KNVESPSN 221
           +D PIQE+  +  + G A      SS + + NQ S     K+VESPSN
Sbjct: 181 MD-PIQEDNAA--SEGDATDARENSSPLTESNQISKDSANKHVESPSN 225

The following BLAST results are available for this feature:
BLAST of CmaCh15G004790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL10_ARATH5.2e-1535.88RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1[more]
ATL7_ARATH5.2e-1540.48RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2 SV=1[more]
ATL59_ARATH1.1e-1439.29E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59 PE=1 SV=1[more]
ATL38_ARATH1.1e-1428.87RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2 SV=1[more]
ATL6_ARATH2.6e-1439.08E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2[more]
BLAST of CmaCh15G004790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB30_CUCSA9.3e-9681.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G044540 PE=4 SV=1[more]
A0A061FRE6_THECC7.6e-7467.53RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044140 PE=4 S... [more]
M5X6C4_PRUPE5.5e-7265.20Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011047mg PE=4 SV=1[more]
V4TE75_9ROSI3.3e-6961.06Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032672mg PE=4 SV=1[more]
A0A067DSW6_CITSI7.4e-6961.06Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027163mg PE=4 SV=1[more]
BLAST of CmaCh15G004790 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49220.12.9e-1635.88 RING/U-box superfamily protein[more]
AT4G10150.12.9e-1640.48 RING/U-box superfamily protein[more]
AT4G10160.16.5e-1639.29 RING/U-box superfamily protein[more]
AT2G34990.16.5e-1628.87 RING/U-box superfamily protein[more]
AT3G05200.11.4e-1539.08 RING/U-box superfamily protein[more]
BLAST of CmaCh15G004790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113451|ref|XP_008456580.1|6.0e-9681.86PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo][more]
gi|449446273|ref|XP_004140896.1|1.3e-9581.86PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus][more]
gi|590566979|ref|XP_007010386.1|1.1e-7367.53RING/U-box superfamily protein isoform 1 [Theobroma cacao][more]
gi|645252150|ref|XP_008231990.1|1.6e-7265.64PREDICTED: RING-H2 finger protein ATL7-like [Prunus mume][more]
gi|657949923|ref|XP_008345511.1|4.6e-7265.35PREDICTED: putative RING-H2 finger protein ATL61 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G004790.1CmaCh15G004790.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 86..129
score: 1.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 87..128
score: 4.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 87..129
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 84..131
score: 6.3
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..154
score: 6.4
NoneNo IPR availablePANTHERPTHR14155:SF145RING-H2 FINGER PROTEIN ATL61-RELATEDcoord: 1..154
score: 6.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 86..134
score: 5.05

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh15G004790Cla013707Watermelon (97103) v1cmawmB261
CmaCh15G004790MELO3C019885Melon (DHL92) v3.5.1cmameB269
CmaCh15G004790ClCG08G008120Watermelon (Charleston Gray)cmawcgB274
CmaCh15G004790CmoCh15G004870Cucurbita moschata (Rifu)cmacmoB287
CmaCh15G004790CmoCh04G026490Cucurbita moschata (Rifu)cmacmoB302
CmaCh15G004790Lsi08G006580Bottle gourd (USVL1VR-Ls)cmalsiB293
CmaCh15G004790Cp4.1LG01g24890Cucurbita pepo (Zucchini)cmacpeB309
CmaCh15G004790Cp4.1LG13g10060Cucurbita pepo (Zucchini)cmacpeB305
CmaCh15G004790MELO3C019885.2Melon (DHL92) v3.6.1cmamedB308
CmaCh15G004790Cla97C08G150880Watermelon (97103) v2cmawmbB320
CmaCh15G004790Bhi04G001022Wax gourdcmawgoB0392
CmaCh15G004790Carg02423Silver-seed gourdcarcmaB0362
CmaCh15G004790Carg04607Silver-seed gourdcarcmaB0962
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh15G004790CmaCh04G025300Cucurbita maxima (Rimu)cmacmaB316
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh15G004790Cucumber (Gy14) v2cgybcmaB615
CmaCh15G004790Melon (DHL92) v3.6.1cmamedB297
CmaCh15G004790Silver-seed gourdcarcmaB0961
CmaCh15G004790Silver-seed gourdcarcmaB1163
CmaCh15G004790Cucumber (Chinese Long) v3cmacucB0359
CmaCh15G004790Watermelon (97103) v2cmawmbB317
CmaCh15G004790Cucumber (Gy14) v1cgycmaB0848
CmaCh15G004790Watermelon (97103) v1cmawmB267
CmaCh15G004790Cucurbita moschata (Rifu)cmacmoB305
CmaCh15G004790Wild cucumber (PI 183967)cmacpiB309
CmaCh15G004790Cucumber (Chinese Long) v2cmacuB305
CmaCh15G004790Melon (DHL92) v3.5.1cmameB263
CmaCh15G004790Melon (DHL92) v3.5.1cmameB273
CmaCh15G004790Watermelon (Charleston Gray)cmawcgB263
CmaCh15G004790Watermelon (Charleston Gray)cmawcgB271
CmaCh15G004790Watermelon (97103) v1cmawmB258
CmaCh15G004790Cucurbita pepo (Zucchini)cmacpeB313
CmaCh15G004790Bottle gourd (USVL1VR-Ls)cmalsiB279
CmaCh15G004790Bottle gourd (USVL1VR-Ls)cmalsiB295