Carg02423 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02423
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING-H2 finger protein
Location	Cucurbita_argyrosperma_scaffold_007 : 1687687 .. 1691130 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGGTGAGCATGTTTTTTTCTTGTTTAATTCGCTTCCAGATTTGATGTGGATATATCTATTTTGATTTTGTTCTAGTTAGTTGATTTTTGTTCTTGTTGGTCGCTAATTTCCCTTGGAACTCGTCTCCCTTTTTGTTACTCTTTCTAGGCTTAATTTCTGTATGCTAATTCATATGCCATAGATTTATCACTGGAAACTGGATATGATTGCCTCTCTGCATTGTAGTTAAAGTTCCATCACTTCAATACTTGCTTTTCTCCCATTTTCATGTAGTTTCAGGATTCATTTCATGCTGTGGTTTTACTTTGTTTCGATTTCGCCCCCTTTTTTCGCTCTCTTTTCGGTCTGCCGGGGCCTATTTCATGTATTTGGATATGGTGTTGTTCGGTTATCCATCTTACATAGTTCTGCTAATACATTTTTTGTGAAACCACGGATCTCCACAATGGTATGATGTTGTCCACTTTGAGCATAAGCTCTCTTACTTTTGCTTTTGGTTTCCCCCAAGAGGTCTCGTACGAGTGAAGATGTATTCCTGGTCATCCTCTTAATTAGCCTACATGGGACTACTCCTTTCAATAATCCTCAACAATTCTTCCCTCAAACAAAGTACACCATTTAGCATCTCTTGAGGTCTCTTATATGGAGCTCTCGAACAACCTCTCCTTAATCGAGGCTCGACTCCTTCTCTAGAGCCGTCGAACAAAGTACACTCTTTAGTCACTTTTTTATTTGATACTTGAGGATTTGATTGGCATGGCTAAGTTAAGGGCATGACTCTGATACCATGTTAGAAACCACGGACCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTAACTTTGCTTTTGGTTTCTCCAAAAGACCTCGTACTAACGAAGATGTATTCCTTACTTATAAACTCATGATCATCCTCTTAATTAGCCAACGTGGGTCTACTTCTCTCAGTAATTCTCAACAATTTCTTGATAGCCTCATTGTCGCTTTTAGTCGGGAGGTTATACAGAAACAAAAAGGGTCTCCGAAAAAACTCAATTCTTGTTTGTTCTCATAGGCAGTGGTTGTGCATTCATATTTCACAATTCACATTTCTACTCCTTTTTCTTTTTCATATGCTACTTTTAGACTTTGTTCAGGCTTTAGGTTGATTCGTTTATGGATATTTCTTTATTTACACGTCGAACTTCTTTGTTGCAGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCGTCTATGAGAAATTCTCAGTACGTGCCCCCTTCAATTCAGTCTCTCATTTCATTCGTTTTCATGATTTTTCAAGAAAATCCCTATCATTTTAATGTAAAGCTTAATGACTTTATCAATGAAAGGAGAGAGACATGTGACTGCATGCTTTACCTATGGGAAAATGATGAGCTTGCAATGAGTTGGTCTTGTAGTTGATTGGTTTTTCCCTAAGTTACTAGAAATCGTGACTTTTTTATGAGACGTTTTGATAAGTTGGCTTTAAACATAGTCCTAATCAGCCTGGGCCCTTAGCAATAGATGTCGATAGAGGCATTACTCGTTAAAATCTCGTATGGCTTGGAACAAACGATAACGTGTTATGGACATGATTCAATCATGCTCCATTAGTTTCACTCTACCTTGGAGCTTTCTGAAGATATTCTTATACAATATTGAGTTCTCTTAGCTTGAGTATACCTAAAGTGTTAAGAACTTAAAACCCCTTATGCAGATCTTCTTTGCTCCCTAGCTCTCATGAAACAACCTTTGCTTGCAATATTTTGAATTAACTCGAGCTCGAGTTCCCTATTCTGGTTGCATTATGTTTAAAGAAACAATACACGACCAAGGGAGAACTCGAACTCCCTATTCTTTCCATTACCAGAGATCCCAAATGATCAAAAGATGTCTGCTCCCCTCTTGTTAACAAACAACTGAACTAAATGAGCCCAACTCTTAAGTTCATTACAGAAGTCCTCTCCCACAACTCACAAATCAAGCCTTACTACGACTCCTTCAGCCCTTCTCCTTCCATACAATTCCACTCTAGGAGGAATATTGAATCTATTGAGCTAGGTTTCAAATGTATACCACACCATCTTGATCATCTATGTGATCCCAGACTGATTGGTTGTAATGGCCCAAGCCCATTGCTAGCAAATATTATCCTCTTTGGACTTTTTATTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGAAAGAGGTTTTCACACCCTTACAAAAAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTTACCTTAGTGATGTTAGAGAAGTGGCAGGTATCATGAAATGTATGCATGGCCGTGGATGCTTTTCAAGAATTCTTCTTATAAATGGGAGAAGTTTCTGTAGAATACCATTCCTGAATGTCTCTCTCTCGTAGACTCGTACTTAGATAACACAAATGGTTTCTGCTGTGCGTGATTTTGTTGTGATTCCTTAGCGGAAAAAAAGACGAGATGGTATTTTGATCCGAGGAAACAAGGTGGATTTCCGAATCTAGTCCAAAAAGTGATGATATTTAAGATTGTGATTACAATTCCTTTTGGTTTTATGTGATGCTACATTCACGTTTGTTTAGCAAATCATGGAAAAACACAACACAGCCAAATTAGATTCTGTTTTGAATGGCAGATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACAAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAACAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAAGCCCTTGAGAACACGTCCTCGTTCATCATCAAAGGTAACCAGAATAGTAAAAATATAGAAAGCCCATCAAATGCTTGAACTTCCCTTAACTATGTGCTTAGAAAGATTGTGTGTCCTGTTGTTTACCACTGTGTATAAGCGCTGTTTGTAGTGAATTATTAGCTCATCTCTCTCTCTCTCTCTCTCTCTTATATTTGAACCAATGCATGCTGAGAAGAGGCTTTTAAGTGTTCAGC

mRNA sequence

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCGTCTATGAGAAATTCTCAATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACAAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAACAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAAGCCCTTGAGAACACGTCCTCGTTCATCATCAAAGGTAACCAGAATAGTAAAAATATAGAAAGCCCATCAAATGCTTGAACTTCCCTTAACTATGTGCTTAGAAAGATTGTGTGTCCTGTTGTTTACCACTGTGTATAAGCGCTGTTTGTAGTGAATTATTAGCTCATCTCTCTCTCTCTCTCTCTCTCTTATATTTGAACCAATGCATGCTGAGAAGAGGCTTTTAAGTGTTCAGC

Coding sequence (CDS)

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCGTCTATGAGAAATTCTCAATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACAAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAACAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAAGCCCTTGAGAACACGTCCTCGTTCATCATCAAAGGTAACCAGAATAGTAAAAATATAGAAAGCCCATCAAATGCTTGA

Protein sequence

MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQPIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA

Homology

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BLAST of Carg02423 vs. NCBI nr
Match: XP_022939748.1 (putative RING-H2 finger protein ATL71 [Cucurbita moschata])

HSP 1 Score: 449.5 bits (1155), Expect = 6.5e-123
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKN+ESPSNA
Sbjct: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNVESPSNA 222

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BLAST of Carg02423 vs. NCBI nr
Match: XP_022993424.1 (putative RING-H2 finger protein ATL71 [Cucurbita maxima])

HSP 1 Score: 435.6 bits (1119), Expect = 9.8e-119
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILP CGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPL+DLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PI QENRRSPRTNGAAE LENTSSFI+KGNQNSKN+ESPSNA
Sbjct: 181 PI-QENRRSPRTNGAAEHLENTSSFIVKGNQNSKNVESPSNA 221

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BLAST of Carg02423 vs. NCBI nr
Match: XP_023551420.1 (putative RING-H2 finger protein ATL71 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.1 bits (1115), Expect = 2.8e-118
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPL VANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEPLFVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFP  DLENS LDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFP-GDLENSELDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PIQQENRRSPRTNGAA+ALENTSSFIIKGNQNSKN+ESPSNA
Sbjct: 181 PIQQENRRSPRTNGAAQALENTSSFIIKGNQNSKNVESPSNA 221

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BLAST of Carg02423 vs. NCBI nr
Match: XP_008456580.1 (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 7.5e-95
Identity = 184/227 (81.06%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKY+D+YFSSMRN+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIRS   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +P  NGA + +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTPGANGAVDPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

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BLAST of Carg02423 vs. NCBI nr
Match: XP_004140896.1 (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus] >KGN46024.1 hypothetical protein Csa_6G044540 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 184/227 (81.06%), Postives = 202/227 (88.99%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+YFSSM+N+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIR+   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +  TNGAA+ +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTTGTNGAADPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

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BLAST of Carg02423 vs. TAIR10
Match: AT1G49220.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 5.0e-16
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGLEPLVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQNLTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL Q+LTCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLRDVPDK 139
           CR  L +   K
Sbjct: 178 CRNCLVETCQK 186

[Close]

BLAST of Carg02423 vs. TAIR10
Match: AT2G34990.1 (RING/U-box superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 41/142 (28.87%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGLEPL 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQN 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  +
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 LTCPVCRISLRDVPDKKRTMQP 145
            TCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]

BLAST of Carg02423 vs. TAIR10
Match: AT4G10160.1 (RING/U-box superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ ++QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]

BLAST of Carg02423 vs. TAIR10
Match: AT4G10150.1 (RING/U-box superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 44/152 (28.95%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +   +++SQC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 86  GLSKDIREMLPVVI-------YKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 145

Query: 113 NCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLN-SDAYAHPCHEFPLQ 172
            CID+WL  + TCP+CR+SL  +P     +    +  + S  N N  +A   P  +   +
Sbjct: 146 ECIDLWLTSHTTCPLCRLSL--IPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATE 205

Query: 173 DLENSGLDQPIQQENRRSPRTNGAAEALENTS 204
            + ++     +++ NR S   +   E  +  S
Sbjct: 206 AISHT---DDVEEGNRDSQEVSKETEENDRNS 223

[Close]

BLAST of Carg02423 vs. TAIR10
Match: AT3G05200.1 (RING/U-box superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-15
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 60  GLEPLVVANFPTKKYSDEYFSSMRNS--QCTVCLADYHSEDLLRILPYCGHSFHVNCIDI 119
           GL+  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH +CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQNLTCPVCRISLRDVPDKKRTMQP 145
           WL  ++TCPVCR +L +   +  +++P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of Carg02423 vs. Swiss-Prot
Match: sp|P0C034|ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-15
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGLEPLVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQNLTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL Q+LTCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLRDVPDK 139
           CR  L +   K
Sbjct: 178 CRNCLVETCQK 186

[Close]

BLAST of Carg02423 vs. Swiss-Prot
Match: sp|O64762|ATL38_ARATH (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 41/142 (28.87%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGLEPL 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQN 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  +
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 LTCPVCRISLRDVPDKKRTMQP 145
            TCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]

BLAST of Carg02423 vs. Swiss-Prot
Match: sp|Q9SN27|ATL59_ARATH (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-14
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ ++QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]

BLAST of Carg02423 vs. Swiss-Prot
Match: sp|Q9SN28|ATL7_ARATH (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-14
Identity = 44/152 (28.95%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +   +++SQC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 86  GLSKDIREMLPVVI-------YKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 145

Query: 113 NCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLN-SDAYAHPCHEFPLQ 172
            CID+WL  + TCP+CR+SL  +P     +    +  + S  N N  +A   P  +   +
Sbjct: 146 ECIDLWLTSHTTCPLCRLSL--IPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATE 205

Query: 173 DLENSGLDQPIQQENRRSPRTNGAAEALENTS 204
            + ++     +++ NR S   +   E  +  S
Sbjct: 206 AISHT---DDVEEGNRDSQEVSKETEENDRNS 223

[Close]

BLAST of Carg02423 vs. Swiss-Prot
Match: sp|Q8RXX9|ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.8e-14
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 60  GLEPLVVANFPTKKYSDEYFSSMRNS--QCTVCLADYHSEDLLRILPYCGHSFHVNCIDI 119
           GL+  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH +CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQNLTCPVCRISLRDVPDKKRTMQP 145
           WL  ++TCPVCR +L +   +  +++P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of Carg02423 vs. TrEMBL
Match: tr|A0A1S3C364|A0A1S3C364_CUCME (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 5.0e-95
Identity = 184/227 (81.06%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKY+D+YFSSMRN+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIRS   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +P  NGA + +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTPGANGAVDPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Carg02423 vs. TrEMBL
Match: tr|A0A0A0KB30|A0A0A0KB30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94
Identity = 184/227 (81.06%), Postives = 202/227 (88.99%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+YFSSM+N+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIR+   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +  TNGAA+ +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTTGTNGAADPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Carg02423 vs. TrEMBL
Match: tr|A0A061FRE6|A0A061FRE6_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_044140 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.0e-73
Identity = 155/232 (66.81%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+S+GINLVMTVIGFTVST+FIVFVCTRLVCARI LNASRRSFP+ASRSDLS LERG HG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGFHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEP+VVANFPTKKYSDE F +  ++QCTVCL++YHSED+LRILPYCGHSFH+ CIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPC------HEFPLQDLE 180
           Q+ TCPVCR+SLR+ P+KKR MQPLFSSAIRSH+ + S    H C      H FP +  +
Sbjct: 121 QHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMES-FNTHSCNCLLRGHGFPSRAHD 180

Query: 181 NSGLDQPIQQENRRSPRTNGAAEALENTSSFIIKGNQ-----NSKNIESPSN 222
           N G+  PI QEN  +   NG AE  EN S  I +G+Q      SK +ESPSN
Sbjct: 181 NGGMG-PI-QENSFASGGNG-AEVGENMSQ-IAEGDQAIKDSRSKRVESPSN 227

[Close]

BLAST of Carg02423 vs. TrEMBL
Match: tr|M5X6C4|M5X6C4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G086200 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.2e-72
Identity = 146/228 (64.04%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSGINLVMTVIGF VST+FIVFVCTRLVCARIHLN SRRSFPIASRSDLS LERGLHG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNVSRRSFPIASRSDLSILERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKK+SD +FS + ++QCTVCL +YH +D+LRILPYCGHSFHV CIDIWL 
Sbjct: 61  VEPVVVANFPTKKFSDAFFSVVEDAQCTVCLMEYHGDDVLRILPYCGHSFHVTCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHY---NLNSDAYAHPCHEFPLQDLENSG 180
           Q+ TCPVCRISLR+ P++KR MQPLFSSAIRSHY   + N+ +Y +  +    +  +N G
Sbjct: 121 QHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGRESFNTHSYRYMLNNRGSRTHDNRG 180

Query: 181 LDQPIQQENRRSPRTNGAAEALEN----TSSFIIKGNQNSKNIESPSN 222
           +D PIQ++N   P    AA+  EN    T +  +  +  +K +ESPSN
Sbjct: 181 MD-PIQEDN--LPSEGDAADTRENAPPLTENIQVSKDLANKRVESPSN 225

[Close]

BLAST of Carg02423 vs. TrEMBL
Match: tr|A0A2P4MVH7|A0A2P4MVH7_QUESU (Ring-h2 finger protein atl32 OS=Quercus suber OX=58331 GN=CFP56_10765 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.5e-72
Identity = 149/231 (64.50%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+S+G+NLVMTVIGF+VST+FIVFVCTRLVCARIH N SRRSFP+ASRSDL  LERGLHG
Sbjct: 1   MISTGLNLVMTVIGFSVSTMFIVFVCTRLVCARIHFNTSRRSFPVASRSDLGLLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEP+VVANFPTKKYSDEYFS+  ++QCTVCLA++H ED+LRILPYCGHSFHV CIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDEYFSASEDAQCTVCLAEFHGEDILRILPYCGHSFHVTCIDIWLQ 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNS-DAYAHPC----HEFPLQDLEN 180
           Q+ TCPVCRISLR+ P++KR MQPLFSSA+RSHY++ S +  ++PC    + FP +   N
Sbjct: 121 QHSTCPVCRISLREFPERKRLMQPLFSSAVRSHYSVESFNGRSYPCLATGNGFPRRTHGN 180

Query: 181 SGLDQPIQQENRRSPRTNGAAEALENTSSF-----IIKGNQNSKNIESPSN 222
              ++   Q  + SP     AEA EN S       IIKG++ +K++ESPSN
Sbjct: 181 R--ERGPTQGGQFSPE-GDRAEAGENVSPLTEGNQIIKGSE-TKHVESPSN 227

The following BLAST results are available for this feature:

BLAST of Carg02423 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939748.1	6.5e-123	99.55	putative RING-H2 finger protein ATL71 [Cucurbita moschata]	[more]
XP_022993424.1	9.8e-119	97.30	putative RING-H2 finger protein ATL71 [Cucurbita maxima]	[more]
XP_023551420.1	2.8e-118	97.30	putative RING-H2 finger protein ATL71 [Cucurbita pepo subsp. pepo]	[more]
XP_008456580.1	7.5e-95	81.06	PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo]	[more]
XP_004140896.1	1.7e-94	81.06	PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus] >KGN46024.1 hypoth...	[more]

BLAST of Carg02423 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49220.1	5.0e-16	35.88	RING/U-box superfamily protein	[more]
AT2G34990.1	1.4e-15	28.87	RING/U-box superfamily protein	[more]
AT4G10160.1	1.9e-15	39.29	RING/U-box superfamily protein	[more]
AT4G10150.1	2.5e-15	28.95	RING/U-box superfamily protein	[more]
AT3G05200.1	3.2e-15	39.08	RING/U-box superfamily protein	[more]

BLAST of Carg02423 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0C034\|ATL10_ARATH	9.0e-15	35.88	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
sp\|O64762\|ATL38_ARATH	2.6e-14	28.87	RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1	[more]
sp\|Q9SN27\|ATL59_ARATH	3.4e-14	39.29	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
sp\|Q9SN28\|ATL7_ARATH	4.5e-14	28.95	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
sp\|Q8RXX9\|ATL6_ARATH	5.8e-14	39.08	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]

BLAST of Carg02423 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C364\|A0A1S3C364_CUCME	5.0e-95	81.06	RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV...	[more]
tr\|A0A0A0KB30\|A0A0A0KB30_CUCSA	1.1e-94	81.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1	[more]
tr\|A0A061FRE6\|A0A061FRE6_THECC	7.0e-73	66.81	RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_04414...	[more]
tr\|M5X6C4\|M5X6C4_PRUPE	1.2e-72	64.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G086200 PE=4 SV=1	[more]
tr\|A0A2P4MVH7\|A0A2P4MVH7_QUESU	3.5e-72	64.50	Ring-h2 finger protein atl32 OS=Quercus suber OX=58331 GN=CFP56_10765 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02423-RA	Carg02423-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 87..128 e-value: 5.6E-7 score: 39.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 86..129 e-value: 2.6E-12 score: 46.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 87..129 score: 12.504
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 56..134 e-value: 6.8E-20 score: 72.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..222
None	No IPR available	PANTHER	PTHR14155:SF160	SUBFAMILY NOT NAMED	coord: 5..162
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 5..162
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 86..129 e-value: 2.76262E-16 score: 68.8677
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 86..134

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02423	Cla013707	Watermelon (97103) v1	carwmB0252
Carg02423	MELO3C019885	Melon (DHL92) v3.5.1	carmeB0268
Carg02423	ClCG08G008120	Watermelon (Charleston Gray)	carwcgB0263
Carg02423	CmaCh15G004790	Cucurbita maxima (Rimu)	carcmaB0362
Carg02423	CmaCh04G025300	Cucurbita maxima (Rimu)	carcmaB0367
Carg02423	CmoCh04G026490	Cucurbita moschata (Rifu)	carcmoB0364
Carg02423	CmoCh15G004870	Cucurbita moschata (Rifu)	carcmoB0362
Carg02423	Lsi08G006580	Bottle gourd (USVL1VR-Ls)	carlsiB243
Carg02423	Cp4.1LG01g24890	Cucurbita pepo (Zucchini)	carcpeB0367
Carg02423	Cp4.1LG13g10060	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02423	MELO3C019885.2	Melon (DHL92) v3.6.1	carmedB0279
Carg02423	Cla97C08G150880	Watermelon (97103) v2	carwmbB0278
Carg02423	Bhi04G001022	Wax gourd	carwgoB0346

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02423	Carg04607	Silver-seed gourd	carcarB307

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02423	Silver-seed gourd	carcarB184
Carg02423	Silver-seed gourd	carcarB306
Carg02423	Silver-seed gourd	carcarB309
Carg02423	Cucumber (Gy14) v2	carcgybB0282
Carg02423	Cucumber (Gy14) v1	carcgyB0318
Carg02423	Cucurbita maxima (Rimu)	carcmaB0370
Carg02423	Cucurbita moschata (Rifu)	carcmoB0366
Carg02423	Cucurbita pepo (Zucchini)	carcpeB0369
Carg02423	Wild cucumber (PI 183967)	carcpiB0299
Carg02423	Cucumber (Chinese Long) v2	carcuB0295
Carg02423	Cucumber (Chinese Long) v3	carcucB0298
Carg02423	Bottle gourd (USVL1VR-Ls)	carlsiB240
Carg02423	Bottle gourd (USVL1VR-Ls)	carlsiB244
Carg02423	Melon (DHL92) v3.5.1	carmeB0263
Carg02423	Melon (DHL92) v3.6.1	carmedB0274
Carg02423	Watermelon (Charleston Gray)	carwcgB0258
Carg02423	Watermelon (Charleston Gray)	carwcgB0262
Carg02423	Watermelon (97103) v1	carwmB0251
Carg02423	Watermelon (97103) v1	carwmB0255
Carg02423	Watermelon (97103) v2	carwmbB0277