CsaV3_6G004100 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G004100
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRING-H2 finger protein ATL8-like
Locationchr6 : 3571477 .. 3577052 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTGTTTCTTCTTTTTTAAATATTCATAAGAAGATTCCATTTTCCTACACCACTTTTGTATTGCAATTCCACTCTCTCAGTGATTTCAATTTAAAACTGATATATATATTGGTGGGGTTTCTTGAGTTTCTCTCTCAATCTCAATCCAAAGTCCAAAATTTTCCAAATGGGTTCTCTCCTTTTCTGTTTTCGCCAATTCACAATTCCTCCACCATGGATTCAATCTTTTTCTCTGGGATTTTTGCACTCTCTCCCACAATAAAACAGTCACTATCTGATATCGACACCCACCAGTTGATTAAACTTTAGTTATACTTCCCACTTCCGTGCAAATTAATTCAAAATTTTAGCCTCTTTTTGCCTTTCCCCAGTTGGGTTATAGCGTTTTCTTGAAATGATTCATCATGGGAATCGAATTTCGTTTTGGTTTTGGCGTGGATGGGATTGGAATTCCTTCCTATGTTGAAGCTGCCAAAGTTAGCACGATTTTAGTTGGCAATAGAAGACACTGTTGAATTGTGGAAACTGTTTTCATTGGGATAATTTTGAGTTTTGATTGGTGTAGAGGAGAAATTTTTAGTTGAAGAGAAAAGGGTTTTTGTAGAATGATGTCTTCGGGAGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGCACTTTGTTCATCGTGTTCGTTTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGTTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGGTGAGCATGTTTTCTCTTATTTAATTCCCTTCCAGATTTGATGTGGAGGATATATGTATTTTAATTGTCTACTGGTTAGTTGTTTTTGTTTGTGTACGTAAGTCTCCAAGCAAAAGATGTGATAATTTCCCTTCTAGCTCTTCTCCCTTTTTGTTTCTTTTCTGGATTTTGATTTTGTATGCTAATCCACATGCTATGTTTATAACTGGAAAGTGAATACGATTGCTTCTCTGCATTATGGTTATAGTGTTACTACTTCCATACTTGCCTTTCTGCCATTTTAATGAAGTTTCAGTATTCATTTCATGTTGTGGTTAATTACTTCGTTTTTTATTTTGCCCCCTTTTTGCTCTTTCTTTTTGGTCTGCTGGGTCGGTTTCATAGGTTTCATAGGTCTGCTAATGCGTAATCTTGGTAGCCTTTTTGCATTGTCGCTTTTAGTCAAATACTAATGGATTGGGAGGCTCTACCGAAACAAAAAGGGTCTCTTATACTCAATTCTTGTTTGGTCTCTTAGGCAATGGTTGTGCATTTCTATTTCACATTGGTACTTGTCCATTCCTTCTATAAATATACTGCTTTTTTAGATTTTTTTCAGGCTTTATGTGATTTATTTTGTTTGTTTGTTTTTTCTTTATATGTATATATATTTATCTATGTATTAAGAATTTTTTTTTGAAAGAATAGACAGGCAAACAAAAAGGAAAACCCCACAAAAACTTATCAAACTACAAGATAGGGTTCCAATCAACAGAAATAAGACCTAAAGAATAATTACAGATGATCTTAGAAACTGAAGGTCTGAGAGAATTGCTGGAACTCTCAGTATCTTGTTTACCCTATCAATTGGGCCTTTTATATCTTTGATATGTCTGGGTATTTCATTTAATCAATGAAATTGTCAATTGGGCCTTTTATATCTTTGATATGTCTGGGTATTTCATTTATCAATGAAATTGTTTCTTATCTAAAAAAAATCTTAGTTTTTGTTGTTTTTCTTGCCCCGACAAAATAGCACACAGACTAGCCTTTACCACGATTTGTTTGTGGACATCTTTTATTTACTCAGTGAATTTCTTTGATACAGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCGACTAAGAAGTATAGTGATGATTACTTCTCGTCTATGCAAAATGCTCAGTATGTGCCCTCTTCAATTCATAGTTTCTCATTGCATTGGTTTTCATGATTTTTTTCAAGAAAATCGCTTTGTTAAAATAAAATATTTGTGTGCATGTGTAAATGTACATACCGCTAGTCGTAAATCCCACTGGAGCATTTTGTAACTAACTGACAGTGAAACGTTGTTAGTAGTTTTTTTAGTACAAAAATTGTGAAGATGAAGGATTGAGCCTTTGACCTCTAGGGAGAAAAGTCATGCCAATTATCATTGGGCTAAGATCACTTTGGCGAAATATGTTGTTATTTTTTTCCTGTGGATAAGATATTATCAAGGCATCGGAGAAAAGTTTGGATAATGTGTAAATATCATTTTAATGTGAAGTATAAGGAGAAAGAATTGAGAGTGCATGATTTAGATAAAGAATTGTCAGTGCATGAATACCTATGGGAATATGATTAGCTTGCAATGAGTCGGTCTTCTAGTTGATTGCTTTTTCCCTAAACATACTCATTTGTGAATATTGGGTGGTTGGATGAGATGTCACAAAACCAGATATTTACCCCCATCACACTGTTCAGGTGGAAAAGCAGAAAGGAAAAAGTAACGGTTTGGGCCATGTAAGGTGTTTCTAGGAATGATTGATGGCCTCTTGAAAATATCTTCAAAAAGTTAGTAGAATAGTGACTTTTTGATGAGATATTTTGGTAAGTTGGCTTGAAACATAGTCCTAATCAGTCTGGGGCCCTTAGCAATAGGTGTGGATTAAGGAATTACTAGTTAAAATCTCATGCTTGAAACAAATGATAATGTGTTTAATGGAATGCTCTCTTTCTCTTTCTTAAATACACATCTACAAATTGTTCAAGATGTGATCATTGCATCTTGGATGAAAGGTAGTGGTTACCAATATAGTCATGTTGGAGTGGACCAGGGATAGTTCAAGAGCTCCCTATTCTTTCCCATTACCAAAATTTCCTAAATAATAAAATATATCCTGCTCCCCTTTCAGCTAACGTACTTGAGCATGTTTACCAAACAATATCCCTCTCGTATCCCTCTGATGAACAACTTGACTAAATGGGCCAAACTCATAAGTTAATGACAGAAACCCTTTCCCTTACTCACTACACCCCAGCCTTTTTCCTTCCATATACTTGCACAATAGGGGTCTACCTCTTATCTAAAAGAGAAAAAAAGAAGACAATATGAGATTTCCCAAGTTCCAAAAATATGAATGGGAAAAAAATAGGGGCAATTGCAAATATAGCAATTAGGCACAAAATATTAGCAAATATAGCACCATGCAAAAGAATTTGCCAATATAACAAAATTTAGATTTAAATTTCAAAGTCTATCATTGATAAACTATATATGTAGTAGGAGTGATAGAGTTTAGTAGTGATAGGTTTTGCTATTTTTGCAATTCTTTAAAATTGTTGTTATACACTTAATTATTAGCCCCAAGAGTGCTACCCATTGCAATTACCATAAAAGAAAAATAAACTTTTATAGTTTGGGCTTTTGTTTGTTACTTTGAACATCAGATTTTGGAATAGAGAGGTAAAGGTTTCCTACTTCCTTTATATTCTATGGTGGTGCTGTTGAAAACATGAGGCAAGGTTAGGCTGCCTACATGTAAAATATGGCTATAAGTCGTAAAATTACAGTTTATATGCTTTGGTCTATTGAGCTAGCTTTTAAAAGTCTAACACACCACCTTGATTATCTAAGTGACCTCAGACCGATTGGTAATGTTAGAGAAGTAGTAAGTATCATGGAAACATAAGCATGGCCATGGATACTCTTCAAGTGTTCTTCTCAGTGTGATGAAGTTTCTGTAGAGCACCACTCCTAAATGTCTCTTTCTTGTAGACTCACACTTAAACAACACAAATGGTTCCTTTGTGATGATTTTGTCACGATTTTATAGGAGAAGAAATGACAAGATGTGGTTTTTTTTTCATCTGTGAGGAAACAAGGTTGAATCTTCAAATCTTGTCCATCAACCATATTGTCTAAATGCTACCTCTTGTTACAGTTCTTGATGGAAAATAAATGGAAATCCTTAAACTAGTGATTACAATTCCTTTGGCAGACCTTTTGGTTTTATGTGATGCTACATTCTGTGGTTTTGTCATCCACTTTTGTATAGCAAATCATGGAGATGGATCACAGAATATATAGTGTGCTATTAGAAGCTTTGTGAGTTCAAGAGCAAGCAAAAAACAAAAAAAAAAAAAAAAAGCCGGAGCATCAATTCCTTTGGCCTTGGCTCATGGAGTTTTGTGTGATTTAAGAACTTTCTCTGAAGTTTTATACTTTTCAATAATTTGAAACATAGATTGAGGATGCTTTGTTTGAAATGAGTTTCCGCAATCTATCACGAGCCATCTTCCCTGTAGTTTGGCAAATTTAATATACCATCCATAGTTTTCCTATATGCTAGTATTAAAATTTATACACAACCATGTACTTACTTGACAGAAATTTAGGACCTCTTGAAAGTGAAAGGAAAGGATCTCTTGGACGAGAAGAATGTCTATGCAAAAATCCAATTGCATTTGTGATTCTGTAATTCGGATATCTAACATAGCTTTTATTTGGAGTGACATTGTAGTAGTAAGTAATAAGATTGTTGTTTATGAAGTTCTTAGCAGTTTTTTCTCATCTTTTCCTATATTAAGGAGATGGTGGAACTGGGAAGTTATTTACTTTTGGAGTTTTAACATGTGGGGTGGGTGATTCAAATTTATAACCTCAGTATATGTCTATACACCAGTTGAGCCATATAGACAAGGACGTATTTATTTTCAATGATATAAAATAGTATTTGGCAACTTTTTTTACTTGGAACGAAATTTTTTAAGCGAGCTTATTCATTTGTTAATGAGATTTAACTGATTGATTTTGGAGAAGGTTTCTAGAATATGACAAGCAAATCTTCTAGTCCTATTAGTACATAGCCCAGCTAAATTAGATTTTGTTTTGAATGGCAGATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAACACTCAACATGCCCAGTTTGTCGTCTATCGTTACGCGAGGTCCAAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTCAGCAATTCGCGCTCTCAACTCAGATCCCTGCCGCGGGTTCCCATTAAGAGACCTTGAAAACAATGGGTTGGAACAACCAATCCAAGAGAATCACTACACAACTGGGACCAATGGAGCAGCGGATCCAATAGAGAACGCTTCCCCATTCATCGAGGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGAGCTTCTCTGATAGGACACTGGACCTGATCATATAGAACTGTGTCCTAAAACTAAAAGTAGATGTCCTTCCCTTAACTATCTCATCTGCTTAGAAAGCTTGTCTATCTTGTTATTTACCACTGTATATAAGTGTTGTTTGTAGTGAATTAATCTTTTGCTGTTGATTTTTCTTTGTACAACATTAGTTATTTTTACACCGTGAACCTTGCTTTTAATAGTTCATCTCTCTCTCTCTCTCTCTCTCTC

mRNA sequence

ATGATGTCTTCGGGAGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGCACTTTGTTCATCGTGTTCGTTTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGTTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCGACTAAGAAGTATAGTGATGATTACTTCTCGTCTATGCAAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAACACTCAACATGCCCAGTTTGTCGTCTATCGTTACGCGAGGTCCAAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTCAGCAATTCGCGCTCTCAACTCAGATCCCTGCCGCGGGTTCCCATTAAGAGACCTTGAAAACAATGGGTTGGAACAACCAATCCAAGAGAATCACTACACAACTGGGACCAATGGAGCAGCGGATCCAATAGAGAACGCTTCCCCATTCATCGAGGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGA

Coding sequence (CDS)

ATGATGTCTTCGGGAGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGCACTTTGTTCATCGTGTTCGTTTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGTTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCGACTAAGAAGTATAGTGATGATTACTTCTCGTCTATGCAAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAACACTCAACATGCCCAGTTTGTCGTCTATCGTTACGCGAGGTCCAAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTCAGCAATTCGCGCTCTCAACTCAGATCCCTGCCGCGGGTTCCCATTAAGAGACCTTGAAAACAATGGGTTGGAACAACCAATCCAAGAGAATCACTACACAACTGGGACCAATGGAGCAGCGGATCCAATAGAGAACGCTTCCCCATTCATCGAGGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGA

Protein sequence

MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA
Homology
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BLAST of CsaV3_6G004100 vs. NCBI nr
Match: XP_004140896.1 (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus] >KGN46024.1 hypothetical protein Csa_6G044540 [Cucumis sativus])

HSP 1 Score: 448.0 bits (1151), Expect = 1.9e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180
           QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

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BLAST of CsaV3_6G004100 vs. NCBI nr
Match: XP_008456580.1 (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 212/218 (97.25%), Postives = 215/218 (98.62%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEPMVVANFPTKKY+DDYFSSM+NAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180
           QHSTCPVCRLSLREVQDKKRTMQPLFSSAIR+LNSDPCRGFPLRDLENNGLEQPIQENHY
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           T G NGA DPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

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BLAST of CsaV3_6G004100 vs. NCBI nr
Match: XP_022990455.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 9.4e-98
Identity = 190/225 (84.44%), Postives = 197/225 (87.56%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLHASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEP VVANFPTKKYSD+YFSSM+NAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180
           +HSTCPVCR SLREV DKKRT+QPLFSSAIR+   LNSD    PC GFPL D EN GLE 
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180

Query: 181 PIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           PIQEN      NGAADPIENAS F EGN NSKG RNKNVESPSNA
Sbjct: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVESPSNA 220

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BLAST of CsaV3_6G004100 vs. NCBI nr
Match: XP_023524777.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363.2 bits (931), Expect = 6.1e-97
Identity = 189/225 (84.00%), Postives = 195/225 (86.67%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVC RLVCARIHLNASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCARLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEP VVANFPTKKYSD+YFSSM+NAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180
           +HSTCPVCR SLREV DKKRT+QPLFSSAIR+   LNSD    PC GFPL D EN GLE 
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180

Query: 181 PIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           PIQEN      NGAADPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

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BLAST of CsaV3_6G004100 vs. NCBI nr
Match: XP_022960827.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata])

HSP 1 Score: 362.5 bits (929), Expect = 1.0e-96
Identity = 189/225 (84.00%), Postives = 196/225 (87.11%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEP VVANFPTKKYSD+YFSSM+NAQCTVCLADY+SEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180
           +HSTCPVCR SLREV DKKRT+QPLFSSAIR+   LNSD    PC GFPL D EN GLE 
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180

Query: 181 PIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           PIQEN      NGAADPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

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BLAST of CsaV3_6G004100 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 85.5 bits (210), Expect = 4.4e-17
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 0 

Query: 60  GVEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWL 119
           G++P V+ + P   +SD+  +     +C VCL+++   +  R+LP C H+FHV+CID+W 
Sbjct: 94  GLDPNVIKSLPVFTFSDE--THKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWF 153

Query: 120 HQHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDP 158
           H HSTCP+CR  +  +   + T        + A++SDP
Sbjct: 154 HSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189

[Close]
BLAST of CsaV3_6G004100 vs. TAIR10
Match: AT1G49220.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 47/131 (35.88%), Postives = 63/131 (48.09%), Query Frame = 0 

Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPV 136
            FP   YS +      + +C +CL+D+ S + LR+LP C H FHV CID WL QH TCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRLSLREVQDK 139
           CR  L E   K
Sbjct: 178 CRNCLVETCQK 186

[Close]
BLAST of CsaV3_6G004100 vs. TAIR10
Match: AT2G34990.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 52/206 (25.24%), Postives = 96/206 (46.60%), Query Frame = 0 

Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPM 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYSD--DYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQH 127
           ++ +FPT  YS+  +    +   +C VC+ ++   + LR++P C H FH +C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRLSLREVQDKKRTMQP-----------LFSSAIRALNSDPCRGFPLRDLENNGL 187
           STCP+CR+ L     ++  + P           LF        + P R +  R L    +
Sbjct: 136 STCPLCRVDLCLQPGERSYLNPEPDLVESTNSHLFDGVTWTNRNRPSRSWSTR-LSQCRV 195

Query: 188 EQPIQENHYTTGTNGAADPIENASPF 198
            Q +    ++TG +    P++N   F
Sbjct: 196 SQILISRSHSTG-HSVVQPLDNLDRF 215

[Close]
BLAST of CsaV3_6G004100 vs. TAIR10
Match: AT4G10160.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-16
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 53  GLERGLHGVEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ + QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQHSTCPVCRLSL 133
            CID+WL  H+TCP+CRLSL
Sbjct: 132 ECIDLWLTSHTTCPLCRLSL 142

[Close]
BLAST of CsaV3_6G004100 vs. TAIR10
Match: AT3G05200.1 (RING/U-box superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.4e-16
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 47  SRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMQNA--QCTVCLADYHSEDLLRILP 106
           SR+ ++   RGL   +  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP
Sbjct: 89  SRATVNAAARGL---DVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLP 148

Query: 107 YCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQP 145
            C H FH +CID WL  H TCPVCR +L E   +  +++P
Sbjct: 149 KCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]
BLAST of CsaV3_6G004100 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 8.0e-16
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 0 

Query: 60  GVEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWL 119
           G++P V+ + P   +SD+  +     +C VCL+++   +  R+LP C H+FHV+CID+W 
Sbjct: 94  GLDPNVIKSLPVFTFSDE--THKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWF 153

Query: 120 HQHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDP 158
           H HSTCP+CR  +  +   + T        + A++SDP
Sbjct: 154 HSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189

[Close]
BLAST of CsaV3_6G004100 vs. Swiss-Prot
Match: sp|P0C034|ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.8e-15
Identity = 47/131 (35.88%), Postives = 63/131 (48.09%), Query Frame = 0 

Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPV 136
            FP   YS +      + +C +CL+D+ S + LR+LP C H FHV CID WL QH TCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRLSLREVQDK 139
           CR  L E   K
Sbjct: 178 CRNCLVETCQK 186

[Close]
BLAST of CsaV3_6G004100 vs. Swiss-Prot
Match: sp|O64762|ATL38_ARATH (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.8e-15
Identity = 52/206 (25.24%), Postives = 96/206 (46.60%), Query Frame = 0 

Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPM 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYSD--DYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQH 127
           ++ +FPT  YS+  +    +   +C VC+ ++   + LR++P C H FH +C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRLSLREVQDKKRTMQP-----------LFSSAIRALNSDPCRGFPLRDLENNGL 187
           STCP+CR+ L     ++  + P           LF        + P R +  R L    +
Sbjct: 136 STCPLCRVDLCLQPGERSYLNPEPDLVESTNSHLFDGVTWTNRNRPSRSWSTR-LSQCRV 195

Query: 188 EQPIQENHYTTGTNGAADPIENASPF 198
            Q +    ++TG +    P++N   F
Sbjct: 196 SQILISRSHSTG-HSVVQPLDNLDRF 215

[Close]
BLAST of CsaV3_6G004100 vs. Swiss-Prot
Match: sp|Q9SN27|ATL59_ARATH (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.9e-15
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 53  GLERGLHGVEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ + QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQHSTCPVCRLSL 133
            CID+WL  H+TCP+CRLSL
Sbjct: 132 ECIDLWLTSHTTCPLCRLSL 142

[Close]
BLAST of CsaV3_6G004100 vs. Swiss-Prot
Match: sp|Q8RXX9|ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 47  SRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMQNA--QCTVCLADYHSEDLLRILP 106
           SR+ ++   RGL   +  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP
Sbjct: 89  SRATVNAAARGL---DVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLP 148

Query: 107 YCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQP 145
            C H FH +CID WL  H TCPVCR +L E   +  +++P
Sbjct: 149 KCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]
BLAST of CsaV3_6G004100 vs. TrEMBL
Match: tr|A0A0A0KB30|A0A0A0KB30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.2e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180
           QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CsaV3_6G004100 vs. TrEMBL
Match: tr|A0A1S3C364|A0A1S3C364_CUCME (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 9.9e-120
Identity = 212/218 (97.25%), Postives = 215/218 (98.62%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEPMVVANFPTKKY+DDYFSSM+NAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180
           QHSTCPVCRLSLREVQDKKRTMQPLFSSAIR+LNSDPCRGFPLRDLENNGLEQPIQENHY
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 219
           T G NGA DPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]
BLAST of CsaV3_6G004100 vs. TrEMBL
Match: tr|A0A061FRE6|A0A061FRE6_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_044140 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.5e-78
Identity = 155/229 (67.69%), Postives = 181/229 (79.04%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+S+G+NLVMTVIGFTVST+FIVFVCTRLVCARI LNASRRSFP+ASRSDLS LERG HG
Sbjct: 1   MISAGINLVMTVIGFTVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGFHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+ F + ++AQCTVCL++YHSED+LRILPYCGHSFH+ CIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDECFLATEDAQCTVCLSEYHSEDVLRILPYCGHSFHITCIDIWLQ 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIR------ALNSDPC------RGFPLRDLEN 180
           QHSTCPVCR+SLRE  +KKR MQPLFSSAIR      + N+  C       GFP R  +N
Sbjct: 121 QHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMESFNTHSCNCLLRGHGFPSRAHDN 180

Query: 181 NGLEQPIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSN 218
            G+  PIQEN + +G NG A+  EN S   EG+Q  K  R+K VESPSN
Sbjct: 181 GGM-GPIQENSFASGGNG-AEVGENMSQIAEGDQAIKDSRSKRVESPSN 227

[Close]
BLAST of CsaV3_6G004100 vs. TrEMBL
Match: tr|A0A2P6SBY9|A0A2P6SBY9_ROSCH (Putative transcription factor interactor and regulator Znf-B family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0333171 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.3e-75
Identity = 151/227 (66.52%), Postives = 177/227 (77.97%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+SSGVNLVMTVIGF VST+FIVFVCTRL+CARIHLN SRRSFP ASRSDLS LE GLHG
Sbjct: 1   MISSGVNLVMTVIGFAVSTMFIVFVCTRLICARIHLNVSRRSFPTASRSDLSILEWGLHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           VEP+ VANFPTKKY+D +FS++++AQCTVCLA+YH +D+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPVAVANFPTKKYNDPFFSAVEDAQCTVCLAEYHGDDVLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA----LNSD------PCRGFPLRDLENNG 180
           QHSTCPVCR+SLRE  ++K  +QPLFSSAIR+     +SD      P      R   N  
Sbjct: 121 QHSTCPVCRISLREHPERKHRLQPLFSSAIRSHYGTESSDIHSYRYPLNNHGSRAHANRS 180

Query: 181 LEQPIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSN 218
           ++ PIQE+H  +  +G +D  ENA P IE N NSK   NK+VESPSN
Sbjct: 181 MD-PIQEDHIASEGDG-SDARENALPLIESNLNSKDMTNKHVESPSN 225

[Close]
BLAST of CsaV3_6G004100 vs. TrEMBL
Match: tr|A0A2P4MVH7|A0A2P4MVH7_QUESU (Ring-h2 finger protein atl32 OS=Quercus suber OX=58331 GN=CFP56_10765 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.6e-74
Identity = 149/229 (65.07%), Postives = 173/229 (75.55%), Query Frame = 0 

Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           M+S+G+NLVMTVIGF+VST+FIVFVCTRLVCARIH N SRRSFP+ASRSDL  LERGLHG
Sbjct: 1   MISTGLNLVMTVIGFSVSTMFIVFVCTRLVCARIHFNTSRRSFPVASRSDLGLLERGLHG 60

Query: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+YFS+ ++AQCTVCLA++H ED+LRILPYCGHSFHV CIDIWL 
Sbjct: 61  LEPVVVANFPTKKYSDEYFSASEDAQCTVCLAEFHGEDILRILPYCGHSFHVTCIDIWLQ 120

Query: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRAL--------NSDPC----RGFPLRDLEN 180
           QHSTCPVCR+SLRE  ++KR MQPLFSSA+R+          S PC     GFP R    
Sbjct: 121 QHSTCPVCRISLREFPERKRLMQPLFSSAVRSHYSVESFNGRSYPCLATGNGFP-RRTHG 180

Query: 181 NGLEQPIQENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSN 218
           N    P Q   ++      A+  EN SP  EGNQ  KG   K+VESPSN
Sbjct: 181 NRERGPTQGGQFSP-EGDRAEAGENVSPLTEGNQIIKGSETKHVESPSN 227

The following BLAST results are available for this feature:
BLAST of CsaV3_6G004100 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140896.11.9e-122100.00PREDICTED: RING-H2 finger protein ATL8-like [Cucumis sativus] >KGN46024.1 hypoth... [more]
XP_008456580.11.5e-11997.25PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo][more]
XP_022990455.19.4e-9884.44RING-H2 finger protein ATL74-like [Cucurbita maxima][more]
XP_023524777.16.1e-9784.00RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo][more]
XP_022960827.11.0e-9684.00RING-H2 finger protein ATL74-like [Cucurbita moschata][more]
BLAST of CsaV3_6G004100 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16720.14.4e-1735.71TOXICOS EN LEVADURA 2[more]
AT1G49220.13.8e-1635.88RING/U-box superfamily protein[more]
AT2G34990.13.8e-1625.24RING/U-box superfamily protein[more]
AT4G10160.14.9e-1642.50RING/U-box superfamily protein[more]
AT3G05200.16.4e-1639.00RING/U-box superfamily protein[more]
BLAST of CsaV3_6G004100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8L9T5|ATL2_ARATH8.0e-1635.71RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
sp|P0C034|ATL10_ARATH6.8e-1535.88RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1[more]
sp|O64762|ATL38_ARATH6.8e-1525.24RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1[more]
sp|Q9SN27|ATL59_ARATH8.9e-1542.50E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ... [more]
sp|Q8RXX9|ATL6_ARATH1.2e-1439.00E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV... [more]
BLAST of CsaV3_6G004100 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KB30|A0A0A0KB30_CUCSA1.2e-122100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1[more]
tr|A0A1S3C364|A0A1S3C364_CUCME9.9e-12097.25RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV... [more]
tr|A0A061FRE6|A0A061FRE6_THECC5.5e-7867.69RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_04414... [more]
tr|A0A2P6SBY9|A0A2P6SBY9_ROSCH4.3e-7566.52Putative transcription factor interactor and regulator Znf-B family OS=Rosa chin... [more]
tr|A0A2P4MVH7|A0A2P4MVH7_QUESU1.6e-7465.07Ring-h2 finger protein atl32 OS=Quercus suber OX=58331 GN=CFP56_10765 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G004100.1CsaV3_6G004100.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 87..128
e-value: 9.5E-7
score: 38.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 86..129
e-value: 9.6E-13
score: 48.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 87..129
score: 12.46
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 55..135
e-value: 1.0E-20
score: 75.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..218
NoneNo IPR availablePANTHERPTHR14155:SF160SUBFAMILY NOT NAMEDcoord: 5..162
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 5..162
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 86..129
e-value: 4.54594E-17
score: 71.1789
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 86..135

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G004100CSPI06G03830Wild cucumber (PI 183967)cpicucB364
CsaV3_6G004100Cucsa.364780Cucumber (Gy14) v1cgycucB556
CsaV3_6G004100CmaCh04G025300Cucurbita maxima (Rimu)cmacucB0907
CsaV3_6G004100CmoCh04G026490Cucurbita moschata (Rifu)cmocucB0898
CsaV3_6G004100Cp4.1LG01g24890Cucurbita pepo (Zucchini)cpecucB0568
CsaV3_6G004100CsGy6G003800Cucumber (Gy14) v2cgybcucB298
CsaV3_6G004100Carg04607Silver-seed gourdcarcucB0728
CsaV3_6G004100Cla013707Watermelon (97103) v1cucwmB482
CsaV3_6G004100MELO3C019885Melon (DHL92) v3.5.1cucmeB484
CsaV3_6G004100ClCG08G008120Watermelon (Charleston Gray)cucwcgB515
CsaV3_6G004100Lsi08G006580Bottle gourd (USVL1VR-Ls)cuclsiB509
CsaV3_6G004100MELO3C019885.2Melon (DHL92) v3.6.1cucmedB474
CsaV3_6G004100Cla97C08G150880Watermelon (97103) v2cucwmbB506
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G004100Wax gourdcucwgoB607