BLAST of CmoCh04G025240 vs. Swiss-Prot
Match:
PPR73_ARATH (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E58 PE=3 SV=1)
HSP 1 Score: 585.1 bits (1507), Expect = 9.2e-166
Identity = 293/624 (46.96%), Postives = 415/624 (66.51%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M LL+ G S ++S L+++ L S+S +AK +HAQLL+ G T+ GNRCLQL
Sbjct: 1 MFQLLRRAHGLCMPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQL 60
Query: 61 YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
Y G V + ++F DI +KN ++WN+CLKGLF+ GY+N A +LFDEMPERD+VSWN M+
Sbjct: 61 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
SG VS GF + VF +MQ RP+E+TFSIL S+++C HG+QIHG+ I SGV N
Sbjct: 121 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
+V+ NS++DMY + G+ DY +F +ME DV+SWN LIL C SG +AL+QF+LMR
Sbjct: 181 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
PD++TVS+++S+CS L+EL GKQ LA C KMGF SNSI+L A ID+FSKCN L D
Sbjct: 241 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 300
Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
+++LF E +WD LC++MI S +WH D++ LF+ A+ +++RP T SSVLSS++
Sbjct: 301 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
LD G+ +H+LV+KLGF+ DT V +SL+EMY K G +D AM VF +DLI WNT+
Sbjct: 361 -VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 420
Query: 421 IMGLVNNGKYFEALGTLEN-LVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
IMGL N + E+L L+ + + DR+TL G+L+AC +AGFV+EG+ IFS+ME H
Sbjct: 421 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
GV P NEHY C+++LL R G EA +I + +P+S W +L A GD E V
Sbjct: 481 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 540
Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
A+ +++ EP+SS PY VL ++Y RWE++V++ AM + + S + I+ V++
Sbjct: 541 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 600
Query: 601 FQDDRLQHLGGESFISALELIVWE 624
F+ D+LQ GG + L+L+ W+
Sbjct: 601 FEADQLQIHGGHDTCALLDLLSWD 623
BLAST of CmoCh04G025240 vs. Swiss-Prot
Match:
PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 377.5 bits (968), Expect = 2.9e-103
Identity = 220/658 (33.43%), Postives = 356/658 (54.10%), Query Frame = 1
Query: 17 SHYSYLIDQCLASR-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 76
S ++ L+D C+ S+ S + +HA ++K G +N F+ NR + Y G + D +VF
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 77 DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
+ ++NI +WN + GL + G+++ A +LF MPERD +WN M+SG +A+
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 137 FLEMQDAGFRPSEYTFSILLSV---MSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYG 196
F M GF +EY+F+ +LS ++ + G Q+H S+I +S+V +G++L+DMY
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199
Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSI 256
K G V+ +F M +V+SWNSLI ++G +V AL+ F +M + PD+ T++
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259
Query: 257 MISLCSFLQELELGKQFLAFCFKMGFTSNSIILS-AAIDLFSKCNSLRDAMQLFE----- 316
+IS C+ L +++G++ K N IILS A +D+++KC+ +++A +F+
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319
Query: 317 --------------------------EANQWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
+ + + +A+I+ +G +++ LF
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379
Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVTSSLVEMYA 436
RE++ PT + +++L + + L LG Q H VLK GF E D V +SL++MY
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439
Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREGVVADRITLAG 496
K G ++ VF M RD +SWN MI+G NG EAL ++ G D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499
Query: 497 VLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQ 556
VL AC HAGFV+EG + FS+M GV P +HYTC+VDLL RAG +EA ++IE Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559
Query: 557 PTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAARGRWESTVRVS 616
P S W SLL AC +H ++ + VAE+++++EP +S PY +L+ +YA G+WE + V
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619
Query: 617 KAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEVEYGNEHEQ 633
K+M K CSW+ I+ H + F H + S L++++ E+ +H +
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676
BLAST of CmoCh04G025240 vs. Swiss-Prot
Match:
PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 7.2e-86
Identity = 178/594 (29.97%), Postives = 309/594 (52.02%), Query Frame = 1
Query: 19 YSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDIK 78
+ +I C +S V + K +HAQ++KL +++ N + +YV F + D RVF I
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI- 230
Query: 79 EKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
P +D++SW+ +++G GF +A+ E
Sbjct: 231 ------------------------------PMKDLISWSSIIAGFSQLGFEFEALSHLKE 290
Query: 139 MQDAG-FRPSEYTFSILLSVMSC---PSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKF 198
M G F P+EY F L S P +G QIHG I+S + N + G SL DMY +
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350
Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMI 258
G ++ +F +E+ D SWN +I G +G++ A++ F MR++G PD ++ ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410
Query: 259 SLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEE-ANQWDQ 318
+ L G Q ++ K GF ++ + ++ + +++ C+ L LFE+ N D
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470
Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
+ ++++ H + + LF L P IT+ ++L + L LGSQ+H
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530
Query: 379 VLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
LK G + + + L++MYAK G + A ++F M +RD++SW+T+I+G +G EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590
Query: 439 LGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVD 498
L + + G+ + +T GVL ACSH G V+EGL +++TM+ +HG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650
Query: 499 LLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLP 558
LL+RAG+ EA I+ +P W +LL AC G+++ ++ AE ++K++P +S
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710
Query: 559 YSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQH 608
+ +L ++A+ G WE+ + +M+ +K+ SW+ I+D ++ F + + H
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
BLAST of CmoCh04G025240 vs. Swiss-Prot
Match:
PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 9.1e-81
Identity = 172/567 (30.34%), Postives = 298/567 (52.56%), Query Frame = 1
Query: 65 GPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCV 124
G VH F G + N+ LK ++ A LF+E+PE+D V++N +++G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVMSCPSH--GKQIHGSMIRSGVDVSNV 184
G +++ +FL+M+ +G +PS++TFS +L +V+ G+Q+H + +G +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286
Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRAT 244
+GN ++D Y K V ++F M ++D +S+N +I ++ +L+ F M+
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346
Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIIL--SAAIDLFSKCNSLR 304
G F + M+S+ + L L++G+Q C + T++SI+ ++ +D+++KC
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406
Query: 305 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
+A +F+ Q A+IS G + LF NLR T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466
Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
F L LG Q+H +++ G + S LV+MYAK G I +A++VF +MP R+ +SWN
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526
Query: 425 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 484
+I +NG A+G ++ G+ D +++ GVL ACSH GFV++G F M +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586
Query: 485 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 544
G+ P +HY C++DLL R G+F EA +++ +P W S+L+AC IH + + ER
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646
Query: 545 AERVMKLEP-QSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVY 604
AE++ +E + + Y ++ +YAA G WE V KAM +KV A SWV + ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706
Query: 605 AFQDDRLQHLGGESFISALELIVWEVE 626
F + H G+ + + + E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730
BLAST of CmoCh04G025240 vs. Swiss-Prot
Match:
PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1)
HSP 1 Score: 301.2 bits (770), Expect = 2.6e-80
Identity = 192/599 (32.05%), Postives = 312/599 (52.09%), Query Frame = 1
Query: 16 FSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 75
F + L+ + +A R + K++HA +K + ++T+L N + LY G + F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 76 DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 135
+E N+ S+N+ +K + ++ AR LFDE+P+ D VS+N ++SG + AM +
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 136 FLEMQDAGFRPSEYTFSILLSVMSCPSHG--KQIHGSMIRSGVDVSNVVLGNSLIDMYGK 195
F M+ GF +T S L++ C KQ+H + G D + V N+ + Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSV-NNAFVTYYSK 187
Query: 196 FGLVDYMFVMFYSMEKV-DVISWNSLIL--GCHRSGFSVLALNQFFLMRATGHSPDQFTV 255
GL+ +FY M+++ D +SWNS+I+ G H+ G LAL + + + G D FT+
Sbjct: 188 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK--GFKIDMFTL 247
Query: 256 SIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKC---NSLRDAMQLFEE 315
+ +++ + L L G+QF K GF NS + S ID +SKC + + D+ ++F+E
Sbjct: 248 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 307
Query: 316 ANQWDQALCDAMISSLAWHGHW-RDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDL 375
D + + MIS + + +++ F R RP + V S+ S +
Sbjct: 308 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 367
Query: 376 GSQIHNLVLKLGFESDTV-VTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLV 435
QIH L +K S+ + V ++L+ +Y K G + +A VF MP + +S+N MI G
Sbjct: 368 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 427
Query: 436 NNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTN 495
+G EAL + ++ G+ ++IT VL AC+H G VDEG F+TM+ + P
Sbjct: 428 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 487
Query: 496 EHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMK 555
EHY+C++DLL RAGK +EA I+ +P S W +LL AC H +M ER A +M
Sbjct: 488 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 547
Query: 556 LEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVI--KDHVYAFQD 603
++P ++ PY +LA +YA +WE V K+M +K CSW+ + K HV+ +D
Sbjct: 548 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
BLAST of CmoCh04G025240 vs. TrEMBL
Match:
M5W3X4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1)
HSP 1 Score: 721.8 bits (1862), Expect = 7.0e-205
Identity = 350/601 (58.24%), Postives = 454/601 (75.54%), Query Frame = 1
Query: 26 CLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFG-PVHDFFRVFGDIKEKNIVS 85
CL+ +S++ AK IHAQL+K+G N++TFLGNRCL +Y FG V+D +VF +I +KNIVS
Sbjct: 22 CLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIVS 81
Query: 86 WNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGF 145
WNICLKG RFG + A N+F EMP RD+VSWN M+SGCVS GF + A +F +MQ AG
Sbjct: 82 WNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQIAGM 141
Query: 146 RPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKFGLVDYMFVMF 205
RPSEYTFSI++S+++C HGKQIHG MIR+G+++SN++LGNSLIDMYGK G VDY F +F
Sbjct: 142 RPSEYTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVF 201
Query: 206 YSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELE 265
++ME+VD+ISWNSLI GCHRSG++ LAL+QFF MR+T HSPD+FT+S +I++C L LE
Sbjct: 202 FTMEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNLE 261
Query: 266 LGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEEANQWDQALCDAMISSLA 325
GKQ AFC K+GF SNSII SAAIDLFSKCN L DA++LFEE + WD A+C++MISS A
Sbjct: 262 KGKQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYA 321
Query: 326 WHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTV 385
H D++ LFV LRENLRPT TLSS+L+S S+F P +LGSQIH+LV+KLGFESD +
Sbjct: 322 RHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAELGSQIHSLVVKLGFESDPI 381
Query: 386 VTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREG 445
V SSL++ Y+KVGLI+ AMK+F ++ +DL SWNTMI+G+ +NGK FE L E L+ EG
Sbjct: 382 VASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISEG 441
Query: 446 VVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEA 505
+ D++TLAGVLLAC+ G VDEG+ +F +ME ++G+VP +EHY +VDLLS GK KEA
Sbjct: 442 IAPDKLTLAGVLLACNLGGLVDEGMTMFLSMEKEYGIVPQDEHYMSIVDLLSSTGKLKEA 501
Query: 506 VNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAAR 565
++I+ + +S W +L AC IHGD E VA R+M+ E QSSLPY VLAR Y R
Sbjct: 502 IDIVAEMPYEASSMIWELILRACVIHGDFKLTETVAHRMMQSEAQSSLPYLVLARAYEMR 561
Query: 566 GRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEV 625
GRWEST+RV KAM+ + V CS + I++HVY F+ D+LQ G+ L L+ WE+
Sbjct: 562 GRWESTIRVRKAMKLKGVRNVIGCSKIGIQNHVYTFKADQLQPHRGKDIYLILRLLCWEM 621
BLAST of CmoCh04G025240 vs. TrEMBL
Match:
B9H7L3_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0005s20740g PE=4 SV=1)
HSP 1 Score: 703.0 bits (1813), Expect = 3.4e-199
Identity = 346/625 (55.36%), Postives = 455/625 (72.80%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M+ L+K R S S+YSYLID C + +S+ A+ HAQL+K+GLN +TFLGNRCL L
Sbjct: 1 MYPLIKQCHRVSRTSLSYYSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDL 60
Query: 61 YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
Y FG V+D +VF DI KNIVSWNICLKGL +F ++ A ++FD+MPERD+VSWN M+
Sbjct: 61 YSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
SG S G+ + A++ F EMQ G RPSE+T+SIL+SV+ HGK+IHGS++RSG+ N
Sbjct: 121 SGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVVFGVRHGKEIHGSIVRSGLGALN 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
VVLGNSLIDMYGKF +DY +F +ME++DVISWNSLI C +SG+ LAL++F +MR+
Sbjct: 181 VVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRS 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
G+SPD+F+VS++I+ C L+ LE GKQ A C K+GF N+II SA IDLFSKCN L D
Sbjct: 241 LGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLED 300
Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
+++LFEE +QWD A+C++MISS A G D + LFV L++++RPT TLSSVL S S+
Sbjct: 301 SVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSI 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
L+ G+Q H+L +K G E D +V SSLVEMY+K G ID ++K+F M +RDLI+WNTM
Sbjct: 361 L-KLEQGTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTM 420
Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
IMGL +NG+ FEAL T + L+R G+ DRITLAGVLLACS GF+ EG+ +FS+ME ++G
Sbjct: 421 IMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
V P+NEHY C VDLL +AG+ EA+ + E+ +P S W S+L AC IHGD+ ERVA
Sbjct: 481 VKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVA 540
Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
ER+M+LEPQSSLPY VLAR++ RG+WE VRV KAM+ +KV CSW+ +K+ VY F
Sbjct: 541 ERLMELEPQSSLPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKVIGCSWIGVKNQVYTF 600
Query: 601 QDDRLQHLGGESFISALELIVWEVE 626
D+LQH G+ L L+ WE E
Sbjct: 601 TADQLQHHRGKEIYLVLRLLNWETE 624
BLAST of CmoCh04G025240 vs. TrEMBL
Match:
A5C139_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1)
HSP 1 Score: 699.5 bits (1804), Expect = 3.7e-198
Identity = 347/593 (58.52%), Postives = 442/593 (74.54%), Query Frame = 1
Query: 42 LLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGA 101
L+K+G N +TFLGNRCL LY G +D RVF DI +KN++SWNI LK RFG + A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 102 RNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCP 161
R++FDEMP+RD+VSWN M+SG VS G + A F EMQ AG RPS +T+S LLS +S
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855
Query: 162 SHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILG 221
GKQIH SMIR+GVD+SNVV+GNSLI MYGKFG+VDY F +F +ME++D+ISWNSLI
Sbjct: 856 CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWS 915
Query: 222 CHRSGFSVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSN 281
C +SG+ LAL QF LMR+ G+SPDQFTVS +I++CS LQ+LE G+Q A C ++GF SN
Sbjct: 916 CGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSN 975
Query: 282 SIILSAAIDLFSKCNSLRDAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALR 341
SI+ SA+IDLFSKCN L D++++FEE QWD LC+AMISS AWHG +++ LFV LR
Sbjct: 976 SIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLR 1035
Query: 342 ENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDN 401
ENLRPT TLS VLS++S+ P+D GSQIH+LV+K G ESD +V SSLVEMYAK GLID+
Sbjct: 1036 ENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDS 1095
Query: 402 AMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSH 461
AMK F + +RDLISWNTMIMGL NG+ +AL + L+ G D ITLAGVLLAC+
Sbjct: 1096 AMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNV 1155
Query: 462 AGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWI 521
G VDEGL+IFS+ME ++GV+P EHY C+VD++SR GK KEA++I+E +P+ W
Sbjct: 1156 GGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG 1215
Query: 522 SLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIA 581
SLL AC I+GD+ ERVAERVM+LEPQSSLPY VLA+ Y RGRWES VRV +AM+
Sbjct: 1216 SLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKG 1275
Query: 582 AQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEVE-YGNEHEQY 634
+KV CSW+ IK+HV+ F++++L H+GG+ L L++ E+E G +QY
Sbjct: 1276 VRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIEDDGYASQQY 1328
BLAST of CmoCh04G025240 vs. TrEMBL
Match:
A0A072V224_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV=1)
HSP 1 Score: 692.6 bits (1786), Expect = 4.5e-196
Identity = 344/625 (55.04%), Postives = 450/625 (72.00%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M+ K+ + H ++ SH S L+D CL+ +S + +HA LKLGLN+ T+LGNRC+ L
Sbjct: 1 MYPFFKHTQYLH-STLSHCSTLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDL 60
Query: 61 YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
Y FG ++D +VF DI KN SWNICLKGLF+ G V A +FDEMP RD+VSWN M+
Sbjct: 61 YTEFGNINDALKVFDDISYKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
SG S GF++ A+ VF+EMQ AG RPS +TFSIL S++S K++HG MIRSG+++SN
Sbjct: 121 SGYASCGFSSHALGVFVEMQGAGVRPSGFTFSILTSLVSSSCRAKEVHGMMIRSGMELSN 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
VV+GNSLI MYGKF LVDY F + SM+++D ISWNSLI CHR+G LAL QF M+A
Sbjct: 181 VVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKA 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
PD+FT S ++S+CS L++LE GKQ AFCFK+GF NSI+ SAAIDLFSKCN L D
Sbjct: 241 AELLPDEFTCSTLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 300
Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
A++LFEE QWD ALC++MIS A H D++ LF+ LR+N+RPT T+S +LSS+S+
Sbjct: 301 AVRLFEEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSI 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
F P+++G+QIH LV K GFESD+VVT+SLV+MYAK G IDNA+ +F ++ ++DL+SWNT+
Sbjct: 361 FLPVEVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTI 420
Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
+MGL NGK + E L REG+ DRITLA VLLAC++ VDEG+ IFS ME + G
Sbjct: 421 MMGLSYNGKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
V P EHY+ VV++L RAG KEAV+I+E + T+ W S+L ACA+ GD+ IE VA
Sbjct: 481 VKPEEEHYSYVVEMLCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVA 540
Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
++M+ PQ SLPY VLA+VY GRWES VRV KAMEN +++ CSWV IK+HVY F
Sbjct: 541 TKIMERAPQISLPYLVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWVGIKNHVYTF 600
Query: 601 QDDRLQHLGGESFISALELIVWEVE 626
+ ++LQH GG+ L L+VWE+E
Sbjct: 601 ESNQLQHYGGKDIYLLLNLLVWEME 624
BLAST of CmoCh04G025240 vs. TrEMBL
Match:
A0A0B2SRT0_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_018329 PE=4 SV=1)
HSP 1 Score: 676.0 bits (1743), Expect = 4.4e-191
Identity = 335/626 (53.51%), Postives = 450/626 (71.88%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M+ LLK +G + S S S L++ CL+ +S++ K +HA LKLGLN T+LGNRCL L
Sbjct: 188 MYPLLKQAQGPY-PSLSCCSLLLNHCLSQKSLNFVKIVHAHFLKLGLNTYTYLGNRCLDL 247
Query: 61 YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
Y FG ++D +VF DI KN SWNICLKGL + G A ++FD MP RD+VSWN M+
Sbjct: 248 YSEFGHINDALKVFDDISHKNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSWNSMI 307
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
SG S G+ + A+++F+EMQ G RPS +TFSIL+S++S H KQIH MIRSGVD+ N
Sbjct: 308 SGYASCGYLSHALELFVEMQGTGVRPSGFTFSILMSLVSSSPHAKQIHCRMIRSGVDLDN 367
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
VVLGNSLI++YGK GLV+Y F + M++ DVISWNSLI CH +G LAL QF+ MR
Sbjct: 368 VVLGNSLINIYGKLGLVEYAFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFYRMRG 427
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
PDQFT S+++S+CS L++L+ GKQ AFCFKMGF NSI+ SAAIDLFSKCN L D
Sbjct: 428 AELLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLED 487
Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
+++LF++ +QWD LC++MISS A H +++ LFV LR+N+RPT +SS+LSS+S+
Sbjct: 488 SVRLFKKQDQWDSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSI 547
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
F P+++G+QIH+LV KLGFESD VV +SLV+MYAK G I +A+ +F +M +DL+SWNT+
Sbjct: 548 FLPVEVGNQIHSLVPKLGFESDAVVANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTI 607
Query: 421 IMGLVNNGKYFEALGTL-ENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
+MGL G+ + E L REG++ DRITL VLLAC++ VDEG+ IFS+ME +
Sbjct: 608 MMGLTYYGRVSLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVDEGIKIFSSMEMEF 667
Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
GV P EHY CVV++LS+AGK KEA++IIET C+ TS W S+L ACAI+GD+ IE V
Sbjct: 668 GVKPGEEHYACVVEMLSKAGKLKEAIDIIETMPCRTTSDIWRSILSACAIYGDLQIIEGV 727
Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
A+++M E Q+SLPY VLA+ Y RGRW+S VR+ KA+EN ++ SW+ I+++VY
Sbjct: 728 AKKIMDRESQTSLPYLVLAQAYQMRGRWDSMVRMRKAVENRGTKEFIGHSWIGIRNNVYT 787
Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
F ++LQH GG+ L L+VWE+E
Sbjct: 788 FASNQLQHYGGKDLYLVLNLLVWEME 812
BLAST of CmoCh04G025240 vs. TAIR10
Match:
AT1G43980.1 (AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 581.6 bits (1498), Expect = 5.7e-166
Identity = 288/607 (47.45%), Postives = 409/607 (67.38%), Query Frame = 1
Query: 18 HYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDI 77
++S L+++ L S+S +AK +HAQLL+ G T+ GNRCLQLY G V + ++F DI
Sbjct: 6 YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65
Query: 78 KEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFL 137
+KN ++WN+CLKGLF+ GY+N A +LFDEMPERD+VSWN M+SG VS GF + VF
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 138 EMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKFGLV 197
+MQ RP+E+TFSIL S+++C HG+QIHG+ I SGV N+V+ NS++DMY + G+
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 198 DYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMISLC 257
DY +F +ME DV+SWN LIL C SG +AL+QF+LMR PD++TVS+++S+C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 258 SFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEEANQWDQALCD 317
S L+EL GKQ LA C KMGF SNSI+L A ID+FSKCN L D+++LF E +WD LC+
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 318 AMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKL 377
+MI S +WH D++ LF+ A+ +++RP T SSVLSS++ LD G+ +H+LV+KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 365
Query: 378 GFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTL 437
GF+ DT V +SL+EMY K G +D AM VF +DLI WNT+IMGL N + E+L
Sbjct: 366 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 425
Query: 438 EN-LVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLS 497
L+ + + DR+TL G+L+AC +AGFV+EG+ IFS+ME HGV P NEHY C+++LL
Sbjct: 426 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 485
Query: 498 RAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSV 557
R G EA +I + +P+S W +L A GD E VA+ +++ EP+SS PY V
Sbjct: 486 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 545
Query: 558 LARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISA 617
L ++Y RWE++V++ AM + + S + I+ V++F+ D+LQ GG +
Sbjct: 546 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCAL 605
Query: 618 LELIVWE 624
L+L+ W+
Sbjct: 606 LDLLSWD 611
BLAST of CmoCh04G025240 vs. TAIR10
Match:
AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 377.5 bits (968), Expect = 1.6e-104
Identity = 220/658 (33.43%), Postives = 356/658 (54.10%), Query Frame = 1
Query: 17 SHYSYLIDQCLASR-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 76
S ++ L+D C+ S+ S + +HA ++K G +N F+ NR + Y G + D +VF
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 77 DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
+ ++NI +WN + GL + G+++ A +LF MPERD +WN M+SG +A+
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 137 FLEMQDAGFRPSEYTFSILLSV---MSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYG 196
F M GF +EY+F+ +LS ++ + G Q+H S+I +S+V +G++L+DMY
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199
Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSI 256
K G V+ +F M +V+SWNSLI ++G +V AL+ F +M + PD+ T++
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259
Query: 257 MISLCSFLQELELGKQFLAFCFKMGFTSNSIILS-AAIDLFSKCNSLRDAMQLFE----- 316
+IS C+ L +++G++ K N IILS A +D+++KC+ +++A +F+
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319
Query: 317 --------------------------EANQWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
+ + + +A+I+ +G +++ LF
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379
Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVTSSLVEMYA 436
RE++ PT + +++L + + L LG Q H VLK GF E D V +SL++MY
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439
Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREGVVADRITLAG 496
K G ++ VF M RD +SWN MI+G NG EAL ++ G D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499
Query: 497 VLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQ 556
VL AC HAGFV+EG + FS+M GV P +HYTC+VDLL RAG +EA ++IE Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559
Query: 557 PTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAARGRWESTVRVS 616
P S W SLL AC +H ++ + VAE+++++EP +S PY +L+ +YA G+WE + V
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619
Query: 617 KAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEVEYGNEHEQ 633
K+M K CSW+ I+ H + F H + S L++++ E+ +H +
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676
BLAST of CmoCh04G025240 vs. TAIR10
Match:
AT3G53360.1 (AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 319.7 bits (818), Expect = 4.1e-87
Identity = 178/594 (29.97%), Postives = 309/594 (52.02%), Query Frame = 1
Query: 19 YSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDIK 78
+ +I C +S V + K +HAQ++KL +++ N + +YV F + D RVF I
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI- 230
Query: 79 EKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
P +D++SW+ +++G GF +A+ E
Sbjct: 231 ------------------------------PMKDLISWSSIIAGFSQLGFEFEALSHLKE 290
Query: 139 MQDAG-FRPSEYTFSILLSVMSC---PSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKF 198
M G F P+EY F L S P +G QIHG I+S + N + G SL DMY +
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350
Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMI 258
G ++ +F +E+ D SWN +I G +G++ A++ F MR++G PD ++ ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410
Query: 259 SLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEE-ANQWDQ 318
+ L G Q ++ K GF ++ + ++ + +++ C+ L LFE+ N D
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470
Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
+ ++++ H + + LF L P IT+ ++L + L LGSQ+H
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530
Query: 379 VLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
LK G + + + L++MYAK G + A ++F M +RD++SW+T+I+G +G EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590
Query: 439 LGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVD 498
L + + G+ + +T GVL ACSH G V+EGL +++TM+ +HG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650
Query: 499 LLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLP 558
LL+RAG+ EA I+ +P W +LL AC G+++ ++ AE ++K++P +S
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710
Query: 559 YSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQH 608
+ +L ++A+ G WE+ + +M+ +K+ SW+ I+D ++ F + + H
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
BLAST of CmoCh04G025240 vs. TAIR10
Match:
AT3G02010.1 (AT3G02010.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 302.8 bits (774), Expect = 5.1e-82
Identity = 172/567 (30.34%), Postives = 298/567 (52.56%), Query Frame = 1
Query: 65 GPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCV 124
G VH F G + N+ LK ++ A LF+E+PE+D V++N +++G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVMSCPSH--GKQIHGSMIRSGVDVSNV 184
G +++ +FL+M+ +G +PS++TFS +L +V+ G+Q+H + +G +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286
Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRAT 244
+GN ++D Y K V ++F M ++D +S+N +I ++ +L+ F M+
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346
Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIIL--SAAIDLFSKCNSLR 304
G F + M+S+ + L L++G+Q C + T++SI+ ++ +D+++KC
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406
Query: 305 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
+A +F+ Q A+IS G + LF NLR T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466
Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
F L LG Q+H +++ G + S LV+MYAK G I +A++VF +MP R+ +SWN
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526
Query: 425 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 484
+I +NG A+G ++ G+ D +++ GVL ACSH GFV++G F M +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586
Query: 485 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 544
G+ P +HY C++DLL R G+F EA +++ +P W S+L+AC IH + + ER
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646
Query: 545 AERVMKLEP-QSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVY 604
AE++ +E + + Y ++ +YAA G WE V KAM +KV A SWV + ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706
Query: 605 AFQDDRLQHLGGESFISALELIVWEVE 626
F + H G+ + + + E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730
BLAST of CmoCh04G025240 vs. TAIR10
Match:
AT3G49710.1 (AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 301.2 bits (770), Expect = 1.5e-81
Identity = 192/599 (32.05%), Postives = 312/599 (52.09%), Query Frame = 1
Query: 16 FSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 75
F + L+ + +A R + K++HA +K + ++T+L N + LY G + F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 76 DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 135
+E N+ S+N+ +K + ++ AR LFDE+P+ D VS+N ++SG + AM +
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 136 FLEMQDAGFRPSEYTFSILLSVMSCPSHG--KQIHGSMIRSGVDVSNVVLGNSLIDMYGK 195
F M+ GF +T S L++ C KQ+H + G D + V N+ + Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSV-NNAFVTYYSK 187
Query: 196 FGLVDYMFVMFYSMEKV-DVISWNSLIL--GCHRSGFSVLALNQFFLMRATGHSPDQFTV 255
GL+ +FY M+++ D +SWNS+I+ G H+ G LAL + + + G D FT+
Sbjct: 188 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK--GFKIDMFTL 247
Query: 256 SIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKC---NSLRDAMQLFEE 315
+ +++ + L L G+QF K GF NS + S ID +SKC + + D+ ++F+E
Sbjct: 248 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 307
Query: 316 ANQWDQALCDAMISSLAWHGHW-RDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDL 375
D + + MIS + + +++ F R RP + V S+ S +
Sbjct: 308 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 367
Query: 376 GSQIHNLVLKLGFESDTV-VTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLV 435
QIH L +K S+ + V ++L+ +Y K G + +A VF MP + +S+N MI G
Sbjct: 368 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 427
Query: 436 NNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTN 495
+G EAL + ++ G+ ++IT VL AC+H G VDEG F+TM+ + P
Sbjct: 428 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 487
Query: 496 EHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMK 555
EHY+C++DLL RAGK +EA I+ +P S W +LL AC H +M ER A +M
Sbjct: 488 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 547
Query: 556 LEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVI--KDHVYAFQD 603
++P ++ PY +LA +YA +WE V K+M +K CSW+ + K HV+ +D
Sbjct: 548 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
BLAST of CmoCh04G025240 vs. NCBI nr
Match:
gi|449453105|ref|XP_004144299.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis sativus])
HSP 1 Score: 980.3 bits (2533), Expect = 1.6e-282
Identity = 485/632 (76.74%), Postives = 540/632 (85.44%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH L L GAH+A SHYS LI +CL SVH AKTIH QLLKLGL++NTFL NRCLQL
Sbjct: 1 MHLQLNKLLGAHKALLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQL 60
Query: 61 YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
Y LFGPVHD +VF IK+KNI+SWNICLKG+FRFG V+GAR+LFD MPERDIVSWN M+
Sbjct: 61 YALFGPVHDVLKVFDGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
SG VSSGF N AM V LEMQ+AGFRPSEYTFSILLS++S HGKQ+HGSMIRSGVDVS+
Sbjct: 121 SGYVSSGFGNSAMGVSLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
+VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGF VLALNQFFLMR
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
T HSPDQFT+S++IS+C LQELELGKQ AFCFKMGFTSNSI+LSA IDLFSKC+SL+
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKV 300
Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
A+QLFE+ NQWD LC+ MISS AWHGHWRDSMWLFVY LRENL P TLSSVLSSISV
Sbjct: 301 AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISV 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
FTP++LGSQIHNLVLKLGF+SD +VTSSLV+MYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
IMGLV+NGKYFEAL T LV EGV+ DRITLAGVLLACS+AG V+EGL IFS M +HG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
VVP NEHY+CVV+LLSRAGKF+EAVNII+TT QPTSTFW SLL CAIHGD+ IE+VA
Sbjct: 481 VVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540
Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
E +MKLEPQSSLPYSVLA+ YA R +WES VRV K ENIA QKVKACSW+V KD+ YAF
Sbjct: 541 EWMMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAF 600
Query: 601 QDDRLQHLGGESFISALELIVWEVEYGNEHEQ 633
QDD+LQ L E+ IS LELI+WE+EYG +HEQ
Sbjct: 601 QDDQLQLLSRENIISVLELIIWEIEYGIDHEQ 632
BLAST of CmoCh04G025240 vs. NCBI nr
Match:
gi|659081917|ref|XP_008441575.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])
HSP 1 Score: 972.6 bits (2513), Expect = 3.3e-280
Identity = 482/634 (76.03%), Postives = 540/634 (85.17%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH L L GAH+A SHYS LI QCL SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1 MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
Query: 61 YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
Y LFGPVHD + F IK+KNI+SWNICLKG+FRFG V+ R+LFD MPERDIVSWN M+
Sbjct: 61 YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
SG VSSGFA AM + LEMQ+AGFRPSEYTFSILLS++S HGKQ+HGSMIRSGVDVS+
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
+VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGF VLALNQFFLMR
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
T HSPDQFT+S++IS+C LQELELGKQ AFC KMGFTSNSI+LSA IDLFSKC+SL+
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300
Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
A+QLFE+ NQ D+ LC+ MISS AWHGHWRDSMWLFVY LRENL P TLSSVLSS+SV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
FTP++LGSQIHNLVLKLGFE D +V SSLV+MYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
IMGLV+NGKYFEAL T LV EGV+ DRITLAGVLLACS+AGFV+EGL IFSTM +HG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
VVP+NEHY+CVV+LLSRAGKF+EAVNII+TT QPTSTFW SLL CAIHGD+ IE+VA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540
Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
E VMKLEPQSSLPYSVLA+ YA R +WES VRV ENIAAQKVKACSW+V KD YAF
Sbjct: 541 EWVMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF 600
Query: 601 QDDRLQHLGGESFISALELIVWEVEYGNEHEQYV 635
+DD+LQ L E+FIS LELI+WE+EYG ++EQY+
Sbjct: 601 EDDQLQLLLRENFISVLELIIWEIEYGIDYEQYL 634
BLAST of CmoCh04G025240 vs. NCBI nr
Match:
gi|645264661|ref|XP_008237784.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Prunus mume])
HSP 1 Score: 745.0 bits (1922), Expect = 1.1e-211
Identity = 360/626 (57.51%), Postives = 468/626 (74.76%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH K G H+ S S+YS+LID CL+ +S++ AK IHAQL+K+G N++TFLGNRCL +
Sbjct: 1 MHSFSKQFHGLHKTSLSYYSHLIDHCLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDV 60
Query: 61 YVLFG-PVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCM 120
Y FG ++D +VF +I +KNIVSWNICLKG RFG + A N+F EMP RD+VSWN M
Sbjct: 61 YFRFGNTLYDALKVFDEITDKNIVSWNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSM 120
Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVS 180
+SGCVS GF + A +F +MQ AG RPSEYTFSI+ S+++C HGKQIHG MIR+G+++S
Sbjct: 121 ISGCVSGGFFDNAFCLFSKMQIAGMRPSEYTFSIVTSLVTCSCHGKQIHGGMIRNGMNLS 180
Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMR 240
N++LGNSLIDMYGK G VDY F +F++ME+VD+ISWNSLI GCHRSG++ LAL+QFF MR
Sbjct: 181 NLILGNSLIDMYGKLGCVDYAFGVFFAMEEVDIISWNSLISGCHRSGYAELALDQFFQMR 240
Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLR 300
+T HSPD+FT+S +I++C L LE GKQ AFC K+GF SNSI+ SAAIDLFSKCN L
Sbjct: 241 STKHSPDEFTISSVINVCCNLPNLEKGKQIFAFCLKVGFLSNSIVSSAAIDLFSKCNRLE 300
Query: 301 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
DA++LFEE + WD A+C++MISS A H D++ LFV LRENLRPT TLSS+L+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYARHDCVEDAVQLFVLTLRENLRPTEFTLSSLLNSAP 360
Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
+F P +LGSQ+H+LV+KLGFESD +V SSL++ Y+KVGLID AMK+F ++ +DL SWNT
Sbjct: 361 IFLPAELGSQMHSLVVKLGFESDPIVASSLIDFYSKVGLIDYAMKIFANVGVKDLTSWNT 420
Query: 421 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
MIMG+ +NGK FEAL E L+ EG+ D++TLAGVL AC+ G VDEG+ +F +M ++
Sbjct: 421 MIMGMAHNGKVFEALNIFEELISEGIAPDKLTLAGVLFACNLGGLVDEGMTMFLSMGEEY 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
G+VP +EHY +VDLLS GK KEA++I+ +P+S W S+L AC IHGD E V
Sbjct: 481 GIVPQDEHYMSIVDLLSSTGKLKEAIDIVAEMPYEPSSMIWESILRACVIHGDFKLTETV 540
Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
A+R+M+ E QSSLPY VLAR Y RGRWES +RV KAM+ + V CS + I++HVY
Sbjct: 541 AQRMMQSEAQSSLPYLVLARAYEMRGRWESMIRVRKAMKLKGVRNVIGCSKIGIQNHVYT 600
Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
F+ D+LQ G+ L L+ WE+E
Sbjct: 601 FKADQLQPHRGKDIYLILRLLCWEME 626
BLAST of CmoCh04G025240 vs. NCBI nr
Match:
gi|694430780|ref|XP_009342851.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])
HSP 1 Score: 743.4 bits (1918), Expect = 3.2e-211
Identity = 363/626 (57.99%), Postives = 472/626 (75.40%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH K L G H+ S S+YS LID CL+ +SV+I K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1 MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNIVKIIHAQLIKVGFNSHTFLGNRCLDV 60
Query: 61 YVLFGP-VHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCM 120
Y FG +HD +V+ +I EKN+VSWNICLKGL RFG + AR++F EMPERD+VSWN M
Sbjct: 61 YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLSRFGEIQKARHMFAEMPERDVVSWNSM 120
Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVS 180
+SG VS GF + A+++F +MQ AG RPSEYTFSI++++++ +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180
Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMR 240
NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+ LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240
Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLR 300
AT ++PD+FT+S +I++C L +LE GKQ AFCFK+GF SNSI+ SAAIDL SKCN L
Sbjct: 241 ATEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300
Query: 301 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
DA++LFEE + WD A+C++MISS A HG D + LFV LRENLRPT TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDVVQLFVLTLRENLRPTEFTLSSMLSSVS 360
Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
+F P + GSQIH+LV+KLGFESD +V SSLV++Y+K GL++ AMK+F++M +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420
Query: 421 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
+IMGL +NGK FE L + LV +G D +TLAGVLLAC+ GF++EG+ IF T+E ++
Sbjct: 421 IIMGLAHNGKVFETLSIFKELVSKGTAPDNLTLAGVLLACNFGGFIEEGMTIFLTIEKEY 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
G+VP EHY +VDLL RAGK +EA++++ + S W S+L AC IHGD ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540
Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
A+R+MKL PQSSLPY VLAR Y RG+WES + V KAM + V CSW+ I++HVY
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600
Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
F ++LQ G+ L L+ E+E
Sbjct: 601 FNAEQLQPPRGKDIYLILRLLSSEME 626
BLAST of CmoCh04G025240 vs. NCBI nr
Match:
gi|694362310|ref|XP_009360668.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])
HSP 1 Score: 740.7 bits (1911), Expect = 2.1e-210
Identity = 361/626 (57.67%), Postives = 469/626 (74.92%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH K L G H+ S S+YS LID CL+ +SV+ K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1 MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNFVKIIHAQLIKVGFNSHTFLGNRCLDV 60
Query: 61 YVLFGP-VHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCM 120
Y FG +HD +V+ +I EKN+VSWNICLKGL RFG + AR++F EMPERD+VSWN M
Sbjct: 61 YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLGRFGEIQKARHMFAEMPERDVVSWNSM 120
Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVS 180
+SG VS GF + A+++F +MQ AG RPSEYTFSI++++++ +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180
Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMR 240
NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+ LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240
Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLR 300
T ++PD+FT+S +I++C L +LE GKQ AFCFK+GF SNSI+ SAAIDL SKCN L
Sbjct: 241 GTEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300
Query: 301 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
DA++LFEE + WD A+C++MISS A HG D++ LFV LRENLRPT TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDAVQLFVLTLRENLRPTEFTLSSMLSSVS 360
Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
+F P + GSQIH+LV+KLGFESD +V SSLV++Y+K GL++ AMK+F++M +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420
Query: 421 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
+IMGL +NGK FE L + L +G D +TLAGVLLAC+ GF++EG+ IF TME ++
Sbjct: 421 IIMGLAHNGKVFETLSIFKELASKGAAPDNLTLAGVLLACNFGGFIEEGMTIFLTMEKEY 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
G+VP EHY +VDLL RAGK +EA++++ + S W S+L AC IHGD ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540
Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
A+R+MKL PQSSLPY VLAR Y RG+WES + V KAM + V CSW+ I++HVY
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600
Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
F + LQ G+ L L+ E+E
Sbjct: 601 FNAEELQPPRGKDIYLILRLLSSEME 626
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PPR73_ARATH | 9.2e-166 | 46.96 | Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop... | [more] |
PP151_ARATH | 2.9e-103 | 33.43 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... | [more] |
PP280_ARATH | 7.2e-86 | 29.97 | Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... | [more] |
PP206_ARATH | 9.1e-81 | 30.34 | Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... | [more] |
PP274_ARATH | 2.6e-80 | 32.05 | Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN... | [more] |
Match Name | E-value | Identity | Description | |
M5W3X4_PRUPE | 7.0e-205 | 58.24 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1 | [more] |
B9H7L3_POPTR | 3.4e-199 | 55.36 | Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... | [more] |
A5C139_VITVI | 3.7e-198 | 58.52 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1 | [more] |
A0A072V224_MEDTR | 4.5e-196 | 55.04 | PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV... | [more] |
A0A0B2SRT0_GLYSO | 4.4e-191 | 53.51 | Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43980.1 | 5.7e-166 | 47.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G13600.1 | 1.6e-104 | 33.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53360.1 | 4.1e-87 | 29.97 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G02010.1 | 5.1e-82 | 30.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G49710.1 | 1.5e-81 | 32.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |