CmoCh04G025240 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G025240
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCmo_Chr04 : 18574582 .. 18576486 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTTCCTGCTAAAGAATCTTCGTGGTGCGCACAGAGCTTCGTTTTCTCATTACTCCTATCTGATTGACCAGTGTTTAGCGTCTAGATCTGTTCATATTGCGAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTCAACAACAATACTTTTCTGGGTAATCGCTGTCTTCAGCTATACGTGTTATTTGGTCCCGTCCATGATTTTTTTAGAGTATTTGGTGATATCAAAGAGAAGAATATTGTATCTTGGAACATATGCTTGAAGGGGTTGTTTAGATTTGGTTATGTCAATGGTGCACGCAATCTGTTCGATGAAATGCCTGAGAGGGACATTGTTTCTTGGAATTGCATGATGTCTGGCTGCGTTTCTTCTGGGTTTGCTAATAAGGCTATGGATGTGTTTCTGGAGATGCAAGATGCTGGTTTTAGACCAAGTGAATATACGTTTTCAATTTTGCTTTCGGTTATGTCGTGTCCTAGTCATGGCAAGCAAATTCATGGCAGTATGATTCGAAGTGGTGTTGATGTGTCAAATGTGGTTCTTGGGAATTCATTGATTGATATGTATGGAAAATTTGGCCTTGTTGATTATATGTTTGTCATGTTTTATAGTATGGAAAAGGTGGATGTTATCTCTTGGAACTCTTTGATTTTGGGCTGCCACAGATCAGGCTTTAGCGTATTGGCACTAAATCAGTTCTTTCTTATGAGAGCCACTGGGCACTCTCCTGATCAGTTCACTGTATCAATAATGATAAGTTTATGTTCTTTCCTCCAAGAATTGGAACTGGGTAAGCAATTTCTTGCTTTCTGTTTCAAGATGGGATTTACTTCTAACAGCATTATACTTAGTGCTGCTATTGACTTGTTTTCCAAATGCAACAGCTTGAGGGATGCAATGCAGCTTTTTGAAGAAGCCAATCAATGGGATCAAGCTCTTTGTGATGCCATGATCTCAAGCTTGGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATGCCTTAAGGGAGAACCTCAGGCCAACAGGGATTACACTCAGCAGTGTCCTGAGCTCCATTTCAGTCTTCACACCTCTGGACTTAGGTAGTCAAATTCATAATTTGGTTCTTAAGTTGGGTTTTGAGTCTGATACCGTCGTCACTAGTTCGCTCGTCGAAATGTATGCTAAAGTTGGGTTAATTGATAACGCCATGAAAGTCTTCACGGATATGCCTTCGAGAGATTTAATATCTTGGAACACTATGATTATGGGTCTGGTTAACAATGGTAAATACTTTGAGGCCTTAGGCACACTTGAAAATTTGGTTAGGGAAGGTGTAGTGGCAGATAGGATAACACTAGCTGGAGTCTTATTAGCTTGCAGCCATGCTGGTTTTGTTGATGAGGGGCTAAACATCTTCTCTACAATGGAAAACAAACACGGGGTCGTACCGACGAATGAGCATTATACTTGTGTGGTGGACTTACTGAGTCGGGCTGGTAAATTCAAAGAAGCAGTTAATATCATCGAAACAACATCGTGCCAACCTACTTCTACGTTTTGGATATCACTACTAGATGCCTGTGCTATTCATGGAGACATGAACACCATTGAAAGAGTTGCGGAGAGGGTGATGAAGCTGGAACCTCAATCATCCTTACCGTATTCGGTGCTGGCTCGAGTATATGCAGCGAGAGGCCGATGGGAAAGCACTGTTCGTGTCAGTAAGGCCATGGAGAATATAGCTGCACAGAAGGTGAAGGCTTGCAGCTGGGTTGTGATCAAAGATCATGTGTATGCTTTCCAGGATGACCGGTTGCAGCATCTGGGGGGAGAAAGTTTCATTTCTGCGTTGGAGCTGATTGTTTGGGAGGTGGAATATGGGAATGAACACGAACAGTATGTTTAA

mRNA sequence

ATGCACTTCCTGCTAAAGAATCTTCGTGGTGCGCACAGAGCTTCGTTTTCTCATTACTCCTATCTGATTGACCAGTGTTTAGCGTCTAGATCTGTTCATATTGCGAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTCAACAACAATACTTTTCTGGGTAATCGCTGTCTTCAGCTATACGTGTTATTTGGTCCCGTCCATGATTTTTTTAGAGTATTTGGTGATATCAAAGAGAAGAATATTGTATCTTGGAACATATGCTTGAAGGGGTTGTTTAGATTTGGTTATGTCAATGGTGCACGCAATCTGTTCGATGAAATGCCTGAGAGGGACATTGTTTCTTGGAATTGCATGATGTCTGGCTGCGTTTCTTCTGGGTTTGCTAATAAGGCTATGGATGTGTTTCTGGAGATGCAAGATGCTGGTTTTAGACCAAGTGAATATACGTTTTCAATTTTGCTTTCGGTTATGTCGTGTCCTAGTCATGGCAAGCAAATTCATGGCAGTATGATTCGAAGTGGTGTTGATGTGTCAAATGTGGTTCTTGGGAATTCATTGATTGATATGTATGGAAAATTTGGCCTTGTTGATTATATGTTTGTCATGTTTTATAGTATGGAAAAGGTGGATGTTATCTCTTGGAACTCTTTGATTTTGGGCTGCCACAGATCAGGCTTTAGCGTATTGGCACTAAATCAGTTCTTTCTTATGAGAGCCACTGGGCACTCTCCTGATCAGTTCACTGTATCAATAATGATAAGTTTATGTTCTTTCCTCCAAGAATTGGAACTGGGTAAGCAATTTCTTGCTTTCTGTTTCAAGATGGGATTTACTTCTAACAGCATTATACTTAGTGCTGCTATTGACTTGTTTTCCAAATGCAACAGCTTGAGGGATGCAATGCAGCTTTTTGAAGAAGCCAATCAATGGGATCAAGCTCTTTGTGATGCCATGATCTCAAGCTTGGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATGCCTTAAGGGAGAACCTCAGGCCAACAGGGATTACACTCAGCAGTGTCCTGAGCTCCATTTCAGTCTTCACACCTCTGGACTTAGGTAGTCAAATTCATAATTTGGTTCTTAAGTTGGGTTTTGAGTCTGATACCGTCGTCACTAGTTCGCTCGTCGAAATGTATGCTAAAGTTGGGTTAATTGATAACGCCATGAAAGTCTTCACGGATATGCCTTCGAGAGATTTAATATCTTGGAACACTATGATTATGGGTCTGGTTAACAATGGTAAATACTTTGAGGCCTTAGGCACACTTGAAAATTTGGTTAGGGAAGGTGTAGTGGCAGATAGGATAACACTAGCTGGAGTCTTATTAGCTTGCAGCCATGCTGGTTTTGTTGATGAGGGGCTAAACATCTTCTCTACAATGGAAAACAAACACGGGGTCGTACCGACGAATGAGCATTATACTTGTGTGGTGGACTTACTGAGTCGGGCTGGTAAATTCAAAGAAGCAGTTAATATCATCGAAACAACATCGTGCCAACCTACTTCTACGTTTTGGATATCACTACTAGATGCCTGTGCTATTCATGGAGACATGAACACCATTGAAAGAGTTGCGGAGAGGGTGATGAAGCTGGAACCTCAATCATCCTTACCGTATTCGGTGCTGGCTCGAGTATATGCAGCGAGAGGCCGATGGGAAAGCACTGTTCGTGTCAGTAAGGCCATGGAGAATATAGCTGCACAGAAGGTGAAGGCTTGCAGCTGGGTTGTGATCAAAGATCATGTGTATGCTTTCCAGGATGACCGGTTGCAGCATCTGGGGGGAGAAAGTTTCATTTCTGCGTTGGAGCTGATTGTTTGGGAGGTGGAATATGGGAATGAACACGAACAGTATGTTTAA

Coding sequence (CDS)

ATGCACTTCCTGCTAAAGAATCTTCGTGGTGCGCACAGAGCTTCGTTTTCTCATTACTCCTATCTGATTGACCAGTGTTTAGCGTCTAGATCTGTTCATATTGCGAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTCAACAACAATACTTTTCTGGGTAATCGCTGTCTTCAGCTATACGTGTTATTTGGTCCCGTCCATGATTTTTTTAGAGTATTTGGTGATATCAAAGAGAAGAATATTGTATCTTGGAACATATGCTTGAAGGGGTTGTTTAGATTTGGTTATGTCAATGGTGCACGCAATCTGTTCGATGAAATGCCTGAGAGGGACATTGTTTCTTGGAATTGCATGATGTCTGGCTGCGTTTCTTCTGGGTTTGCTAATAAGGCTATGGATGTGTTTCTGGAGATGCAAGATGCTGGTTTTAGACCAAGTGAATATACGTTTTCAATTTTGCTTTCGGTTATGTCGTGTCCTAGTCATGGCAAGCAAATTCATGGCAGTATGATTCGAAGTGGTGTTGATGTGTCAAATGTGGTTCTTGGGAATTCATTGATTGATATGTATGGAAAATTTGGCCTTGTTGATTATATGTTTGTCATGTTTTATAGTATGGAAAAGGTGGATGTTATCTCTTGGAACTCTTTGATTTTGGGCTGCCACAGATCAGGCTTTAGCGTATTGGCACTAAATCAGTTCTTTCTTATGAGAGCCACTGGGCACTCTCCTGATCAGTTCACTGTATCAATAATGATAAGTTTATGTTCTTTCCTCCAAGAATTGGAACTGGGTAAGCAATTTCTTGCTTTCTGTTTCAAGATGGGATTTACTTCTAACAGCATTATACTTAGTGCTGCTATTGACTTGTTTTCCAAATGCAACAGCTTGAGGGATGCAATGCAGCTTTTTGAAGAAGCCAATCAATGGGATCAAGCTCTTTGTGATGCCATGATCTCAAGCTTGGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATGCCTTAAGGGAGAACCTCAGGCCAACAGGGATTACACTCAGCAGTGTCCTGAGCTCCATTTCAGTCTTCACACCTCTGGACTTAGGTAGTCAAATTCATAATTTGGTTCTTAAGTTGGGTTTTGAGTCTGATACCGTCGTCACTAGTTCGCTCGTCGAAATGTATGCTAAAGTTGGGTTAATTGATAACGCCATGAAAGTCTTCACGGATATGCCTTCGAGAGATTTAATATCTTGGAACACTATGATTATGGGTCTGGTTAACAATGGTAAATACTTTGAGGCCTTAGGCACACTTGAAAATTTGGTTAGGGAAGGTGTAGTGGCAGATAGGATAACACTAGCTGGAGTCTTATTAGCTTGCAGCCATGCTGGTTTTGTTGATGAGGGGCTAAACATCTTCTCTACAATGGAAAACAAACACGGGGTCGTACCGACGAATGAGCATTATACTTGTGTGGTGGACTTACTGAGTCGGGCTGGTAAATTCAAAGAAGCAGTTAATATCATCGAAACAACATCGTGCCAACCTACTTCTACGTTTTGGATATCACTACTAGATGCCTGTGCTATTCATGGAGACATGAACACCATTGAAAGAGTTGCGGAGAGGGTGATGAAGCTGGAACCTCAATCATCCTTACCGTATTCGGTGCTGGCTCGAGTATATGCAGCGAGAGGCCGATGGGAAAGCACTGTTCGTGTCAGTAAGGCCATGGAGAATATAGCTGCACAGAAGGTGAAGGCTTGCAGCTGGGTTGTGATCAAAGATCATGTGTATGCTTTCCAGGATGACCGGTTGCAGCATCTGGGGGGAGAAAGTTTCATTTCTGCGTTGGAGCTGATTGTTTGGGAGGTGGAATATGGGAATGAACACGAACAGTATGTTTAA
BLAST of CmoCh04G025240 vs. Swiss-Prot
Match: PPR73_ARATH (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E58 PE=3 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 9.2e-166
Identity = 293/624 (46.96%), Postives = 415/624 (66.51%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M  LL+   G    S  ++S L+++ L S+S  +AK +HAQLL+ G    T+ GNRCLQL
Sbjct: 1   MFQLLRRAHGLCMPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQL 60

Query: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
           Y   G V +  ++F DI +KN ++WN+CLKGLF+ GY+N A +LFDEMPERD+VSWN M+
Sbjct: 61  YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
           SG VS GF    + VF +MQ    RP+E+TFSIL S+++C  HG+QIHG+ I SGV   N
Sbjct: 121 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
           +V+ NS++DMY + G+ DY   +F +ME  DV+SWN LIL C  SG   +AL+QF+LMR 
Sbjct: 181 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
               PD++TVS+++S+CS L+EL  GKQ LA C KMGF SNSI+L A ID+FSKCN L D
Sbjct: 241 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 300

Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           +++LF E  +WD  LC++MI S +WH    D++ LF+ A+ +++RP   T SSVLSS++ 
Sbjct: 301 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
              LD G+ +H+LV+KLGF+ DT V +SL+EMY K G +D AM VF     +DLI WNT+
Sbjct: 361 -VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 420

Query: 421 IMGLVNNGKYFEALGTLEN-LVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
           IMGL  N +  E+L      L+ + +  DR+TL G+L+AC +AGFV+EG+ IFS+ME  H
Sbjct: 421 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
           GV P NEHY C+++LL R G   EA +I +    +P+S  W  +L A    GD    E V
Sbjct: 481 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 540

Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
           A+ +++ EP+SS PY VL ++Y    RWE++V++  AM     +  +  S + I+  V++
Sbjct: 541 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 600

Query: 601 FQDDRLQHLGGESFISALELIVWE 624
           F+ D+LQ  GG    + L+L+ W+
Sbjct: 601 FEADQLQIHGGHDTCALLDLLSWD 623

BLAST of CmoCh04G025240 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.9e-103
Identity = 220/658 (33.43%), Postives = 356/658 (54.10%), Query Frame = 1

Query: 17  SHYSYLIDQCLASR-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 76
           S ++ L+D C+ S+ S    + +HA ++K G +N  F+ NR +  Y   G + D  +VF 
Sbjct: 20  SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79

Query: 77  DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
            + ++NI +WN  + GL + G+++ A +LF  MPERD  +WN M+SG        +A+  
Sbjct: 80  KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139

Query: 137 FLEMQDAGFRPSEYTFSILLSV---MSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYG 196
           F  M   GF  +EY+F+ +LS    ++  + G Q+H S+I     +S+V +G++L+DMY 
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199

Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSI 256
           K G V+    +F  M   +V+SWNSLI    ++G +V AL+ F +M  +   PD+ T++ 
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259

Query: 257 MISLCSFLQELELGKQFLAFCFKMGFTSNSIILS-AAIDLFSKCNSLRDAMQLFE----- 316
           +IS C+ L  +++G++      K     N IILS A +D+++KC+ +++A  +F+     
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319

Query: 317 --------------------------EANQWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
                                     +  + +    +A+I+    +G   +++ LF    
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379

Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVTSSLVEMYA 436
           RE++ PT  + +++L + +    L LG Q H  VLK GF      E D  V +SL++MY 
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439

Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREGVVADRITLAG 496
           K G ++    VF  M  RD +SWN MI+G   NG   EAL     ++  G   D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499

Query: 497 VLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQ 556
           VL AC HAGFV+EG + FS+M    GV P  +HYTC+VDLL RAG  +EA ++IE    Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559

Query: 557 PTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAARGRWESTVRVS 616
           P S  W SLL AC +H ++   + VAE+++++EP +S PY +L+ +YA  G+WE  + V 
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619

Query: 617 KAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEVEYGNEHEQ 633
           K+M      K   CSW+ I+ H + F      H   +   S L++++ E+    +H +
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676

BLAST of CmoCh04G025240 vs. Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.2e-86
Identity = 178/594 (29.97%), Postives = 309/594 (52.02%), Query Frame = 1

Query: 19  YSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDIK 78
           +  +I  C +S  V + K +HAQ++KL  +++    N  + +YV F  + D  RVF  I 
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI- 230

Query: 79  EKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
                                         P +D++SW+ +++G    GF  +A+    E
Sbjct: 231 ------------------------------PMKDLISWSSIIAGFSQLGFEFEALSHLKE 290

Query: 139 MQDAG-FRPSEYTFSILLSVMSC---PSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKF 198
           M   G F P+EY F   L   S    P +G QIHG  I+S +   N + G SL DMY + 
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350

Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMI 258
           G ++    +F  +E+ D  SWN +I G   +G++  A++ F  MR++G  PD  ++  ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410

Query: 259 SLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEE-ANQWDQ 318
              +    L  G Q  ++  K GF ++  + ++ + +++ C+ L     LFE+  N  D 
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470

Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
              + ++++   H    + + LF   L     P  IT+ ++L      + L LGSQ+H  
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530

Query: 379 VLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
            LK G   +  + + L++MYAK G +  A ++F  M +RD++SW+T+I+G   +G   EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590

Query: 439 LGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVD 498
           L   + +   G+  + +T  GVL ACSH G V+EGL +++TM+ +HG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650

Query: 499 LLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLP 558
           LL+RAG+  EA   I+    +P    W +LL AC   G+++  ++ AE ++K++P +S  
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710

Query: 559 YSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQH 608
           + +L  ++A+ G WE+   +  +M+    +K+   SW+ I+D ++ F  + + H
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732

BLAST of CmoCh04G025240 vs. Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.1e-81
Identity = 172/567 (30.34%), Postives = 298/567 (52.56%), Query Frame = 1

Query: 65  GPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCV 124
           G VH F    G      +   N+ LK       ++ A  LF+E+PE+D V++N +++G  
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226

Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVMSCPSH--GKQIHGSMIRSGVDVSNV 184
             G   +++ +FL+M+ +G +PS++TFS +L +V+       G+Q+H   + +G    + 
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286

Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRAT 244
            +GN ++D Y K   V    ++F  M ++D +S+N +I    ++     +L+ F  M+  
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346

Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIIL--SAAIDLFSKCNSLR 304
           G     F  + M+S+ + L  L++G+Q    C  +  T++SI+   ++ +D+++KC    
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406

Query: 305 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
           +A  +F+   Q       A+IS     G     + LF      NLR    T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466

Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
            F  L LG Q+H  +++ G   +    S LV+MYAK G I +A++VF +MP R+ +SWN 
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526

Query: 425 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 484
           +I    +NG    A+G    ++  G+  D +++ GVL ACSH GFV++G   F  M   +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586

Query: 485 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 544
           G+ P  +HY C++DLL R G+F EA  +++    +P    W S+L+AC IH + +  ER 
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646

Query: 545 AERVMKLEP-QSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVY 604
           AE++  +E  + +  Y  ++ +YAA G WE    V KAM     +KV A SWV +   ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706

Query: 605 AFQDDRLQHLGGESFISALELIVWEVE 626
            F  +   H  G+  +  +  +  E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730

BLAST of CmoCh04G025240 vs. Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.6e-80
Identity = 192/599 (32.05%), Postives = 312/599 (52.09%), Query Frame = 1

Query: 16  FSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 75
           F  +  L+ + +A R +   K++HA  +K  + ++T+L N  + LY   G +      F 
Sbjct: 8   FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 76  DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 135
             +E N+ S+N+ +K   +   ++ AR LFDE+P+ D VS+N ++SG   +     AM +
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127

Query: 136 FLEMQDAGFRPSEYTFSILLSVMSCPSHG--KQIHGSMIRSGVDVSNVVLGNSLIDMYGK 195
           F  M+  GF    +T S L++   C      KQ+H   +  G D  + V  N+ +  Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSV-NNAFVTYYSK 187

Query: 196 FGLVDYMFVMFYSMEKV-DVISWNSLIL--GCHRSGFSVLALNQFFLMRATGHSPDQFTV 255
            GL+     +FY M+++ D +SWNS+I+  G H+ G   LAL +  + +  G   D FT+
Sbjct: 188 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK--GFKIDMFTL 247

Query: 256 SIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKC---NSLRDAMQLFEE 315
           + +++  + L  L  G+QF     K GF  NS + S  ID +SKC   + + D+ ++F+E
Sbjct: 248 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 307

Query: 316 ANQWDQALCDAMISSLAWHGHW-RDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDL 375
               D  + + MIS  + +     +++  F    R   RP   +   V S+ S  +    
Sbjct: 308 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 367

Query: 376 GSQIHNLVLKLGFESDTV-VTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLV 435
             QIH L +K    S+ + V ++L+ +Y K G + +A  VF  MP  + +S+N MI G  
Sbjct: 368 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 427

Query: 436 NNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTN 495
            +G   EAL   + ++  G+  ++IT   VL AC+H G VDEG   F+TM+    + P  
Sbjct: 428 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 487

Query: 496 EHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMK 555
           EHY+C++DLL RAGK +EA   I+    +P S  W +LL AC  H +M   ER A  +M 
Sbjct: 488 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 547

Query: 556 LEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVI--KDHVYAFQD 603
           ++P ++ PY +LA +YA   +WE    V K+M     +K   CSW+ +  K HV+  +D
Sbjct: 548 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602

BLAST of CmoCh04G025240 vs. TrEMBL
Match: M5W3X4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 7.0e-205
Identity = 350/601 (58.24%), Postives = 454/601 (75.54%), Query Frame = 1

Query: 26  CLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFG-PVHDFFRVFGDIKEKNIVS 85
           CL+ +S++ AK IHAQL+K+G N++TFLGNRCL +Y  FG  V+D  +VF +I +KNIVS
Sbjct: 22  CLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIVS 81

Query: 86  WNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGF 145
           WNICLKG  RFG +  A N+F EMP RD+VSWN M+SGCVS GF + A  +F +MQ AG 
Sbjct: 82  WNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQIAGM 141

Query: 146 RPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKFGLVDYMFVMF 205
           RPSEYTFSI++S+++C  HGKQIHG MIR+G+++SN++LGNSLIDMYGK G VDY F +F
Sbjct: 142 RPSEYTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVF 201

Query: 206 YSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELE 265
           ++ME+VD+ISWNSLI GCHRSG++ LAL+QFF MR+T HSPD+FT+S +I++C  L  LE
Sbjct: 202 FTMEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNLE 261

Query: 266 LGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEEANQWDQALCDAMISSLA 325
            GKQ  AFC K+GF SNSII SAAIDLFSKCN L DA++LFEE + WD A+C++MISS A
Sbjct: 262 KGKQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYA 321

Query: 326 WHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTV 385
            H    D++ LFV  LRENLRPT  TLSS+L+S S+F P +LGSQIH+LV+KLGFESD +
Sbjct: 322 RHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAELGSQIHSLVVKLGFESDPI 381

Query: 386 VTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREG 445
           V SSL++ Y+KVGLI+ AMK+F ++  +DL SWNTMI+G+ +NGK FE L   E L+ EG
Sbjct: 382 VASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISEG 441

Query: 446 VVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEA 505
           +  D++TLAGVLLAC+  G VDEG+ +F +ME ++G+VP +EHY  +VDLLS  GK KEA
Sbjct: 442 IAPDKLTLAGVLLACNLGGLVDEGMTMFLSMEKEYGIVPQDEHYMSIVDLLSSTGKLKEA 501

Query: 506 VNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAAR 565
           ++I+     + +S  W  +L AC IHGD    E VA R+M+ E QSSLPY VLAR Y  R
Sbjct: 502 IDIVAEMPYEASSMIWELILRACVIHGDFKLTETVAHRMMQSEAQSSLPYLVLARAYEMR 561

Query: 566 GRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEV 625
           GRWEST+RV KAM+    + V  CS + I++HVY F+ D+LQ   G+     L L+ WE+
Sbjct: 562 GRWESTIRVRKAMKLKGVRNVIGCSKIGIQNHVYTFKADQLQPHRGKDIYLILRLLCWEM 621

BLAST of CmoCh04G025240 vs. TrEMBL
Match: B9H7L3_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0005s20740g PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 3.4e-199
Identity = 346/625 (55.36%), Postives = 455/625 (72.80%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M+ L+K      R S S+YSYLID C + +S+  A+  HAQL+K+GLN +TFLGNRCL L
Sbjct: 1   MYPLIKQCHRVSRTSLSYYSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDL 60

Query: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
           Y  FG V+D  +VF DI  KNIVSWNICLKGL +F  ++ A ++FD+MPERD+VSWN M+
Sbjct: 61  YSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
           SG  S G+ + A++ F EMQ  G RPSE+T+SIL+SV+    HGK+IHGS++RSG+   N
Sbjct: 121 SGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVVFGVRHGKEIHGSIVRSGLGALN 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
           VVLGNSLIDMYGKF  +DY   +F +ME++DVISWNSLI  C +SG+  LAL++F +MR+
Sbjct: 181 VVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRS 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
            G+SPD+F+VS++I+ C  L+ LE GKQ  A C K+GF  N+II SA IDLFSKCN L D
Sbjct: 241 LGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLED 300

Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           +++LFEE +QWD A+C++MISS A  G   D + LFV  L++++RPT  TLSSVL S S+
Sbjct: 301 SVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSI 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
              L+ G+Q H+L +K G E D +V SSLVEMY+K G ID ++K+F  M +RDLI+WNTM
Sbjct: 361 L-KLEQGTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTM 420

Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
           IMGL +NG+ FEAL T + L+R G+  DRITLAGVLLACS  GF+ EG+ +FS+ME ++G
Sbjct: 421 IMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
           V P+NEHY C VDLL +AG+  EA+ + E+   +P S  W S+L AC IHGD+   ERVA
Sbjct: 481 VKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVA 540

Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
           ER+M+LEPQSSLPY VLAR++  RG+WE  VRV KAM+    +KV  CSW+ +K+ VY F
Sbjct: 541 ERLMELEPQSSLPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKVIGCSWIGVKNQVYTF 600

Query: 601 QDDRLQHLGGESFISALELIVWEVE 626
             D+LQH  G+     L L+ WE E
Sbjct: 601 TADQLQHHRGKEIYLVLRLLNWETE 624

BLAST of CmoCh04G025240 vs. TrEMBL
Match: A5C139_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 3.7e-198
Identity = 347/593 (58.52%), Postives = 442/593 (74.54%), Query Frame = 1

Query: 42   LLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGA 101
            L+K+G N +TFLGNRCL LY   G  +D  RVF DI +KN++SWNI LK   RFG +  A
Sbjct: 736  LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795

Query: 102  RNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCP 161
            R++FDEMP+RD+VSWN M+SG VS G  + A   F EMQ AG RPS +T+S LLS +S  
Sbjct: 796  RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855

Query: 162  SHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILG 221
              GKQIH SMIR+GVD+SNVV+GNSLI MYGKFG+VDY F +F +ME++D+ISWNSLI  
Sbjct: 856  CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWS 915

Query: 222  CHRSGFSVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSN 281
            C +SG+  LAL QF LMR+ G+SPDQFTVS +I++CS LQ+LE G+Q  A C ++GF SN
Sbjct: 916  CGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSN 975

Query: 282  SIILSAAIDLFSKCNSLRDAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALR 341
            SI+ SA+IDLFSKCN L D++++FEE  QWD  LC+AMISS AWHG   +++ LFV  LR
Sbjct: 976  SIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLR 1035

Query: 342  ENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDN 401
            ENLRPT  TLS VLS++S+  P+D GSQIH+LV+K G ESD +V SSLVEMYAK GLID+
Sbjct: 1036 ENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDS 1095

Query: 402  AMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSH 461
            AMK F  + +RDLISWNTMIMGL  NG+  +AL   + L+  G   D ITLAGVLLAC+ 
Sbjct: 1096 AMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNV 1155

Query: 462  AGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWI 521
             G VDEGL+IFS+ME ++GV+P  EHY C+VD++SR GK KEA++I+E    +P+   W 
Sbjct: 1156 GGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG 1215

Query: 522  SLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIA 581
            SLL AC I+GD+   ERVAERVM+LEPQSSLPY VLA+ Y  RGRWES VRV +AM+   
Sbjct: 1216 SLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKG 1275

Query: 582  AQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEVE-YGNEHEQY 634
             +KV  CSW+ IK+HV+ F++++L H+GG+     L L++ E+E  G   +QY
Sbjct: 1276 VRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIEDDGYASQQY 1328

BLAST of CmoCh04G025240 vs. TrEMBL
Match: A0A072V224_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 4.5e-196
Identity = 344/625 (55.04%), Postives = 450/625 (72.00%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M+   K+ +  H ++ SH S L+D CL+ +S +    +HA  LKLGLN+ T+LGNRC+ L
Sbjct: 1   MYPFFKHTQYLH-STLSHCSTLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDL 60

Query: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
           Y  FG ++D  +VF DI  KN  SWNICLKGLF+ G V  A  +FDEMP RD+VSWN M+
Sbjct: 61  YTEFGNINDALKVFDDISYKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
           SG  S GF++ A+ VF+EMQ AG RPS +TFSIL S++S     K++HG MIRSG+++SN
Sbjct: 121 SGYASCGFSSHALGVFVEMQGAGVRPSGFTFSILTSLVSSSCRAKEVHGMMIRSGMELSN 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
           VV+GNSLI MYGKF LVDY F +  SM+++D ISWNSLI  CHR+G   LAL QF  M+A
Sbjct: 181 VVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKA 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
               PD+FT S ++S+CS L++LE GKQ  AFCFK+GF  NSI+ SAAIDLFSKCN L D
Sbjct: 241 AELLPDEFTCSTLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 300

Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           A++LFEE  QWD ALC++MIS  A H    D++ LF+  LR+N+RPT  T+S +LSS+S+
Sbjct: 301 AVRLFEEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSI 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           F P+++G+QIH LV K GFESD+VVT+SLV+MYAK G IDNA+ +F ++ ++DL+SWNT+
Sbjct: 361 FLPVEVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTI 420

Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
           +MGL  NGK    +   E L REG+  DRITLA VLLAC++   VDEG+ IFS ME + G
Sbjct: 421 MMGLSYNGKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
           V P  EHY+ VV++L RAG  KEAV+I+E    + T+  W S+L ACA+ GD+  IE VA
Sbjct: 481 VKPEEEHYSYVVEMLCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVA 540

Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
            ++M+  PQ SLPY VLA+VY   GRWES VRV KAMEN  +++   CSWV IK+HVY F
Sbjct: 541 TKIMERAPQISLPYLVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWVGIKNHVYTF 600

Query: 601 QDDRLQHLGGESFISALELIVWEVE 626
           + ++LQH GG+     L L+VWE+E
Sbjct: 601 ESNQLQHYGGKDIYLLLNLLVWEME 624

BLAST of CmoCh04G025240 vs. TrEMBL
Match: A0A0B2SRT0_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_018329 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 4.4e-191
Identity = 335/626 (53.51%), Postives = 450/626 (71.88%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M+ LLK  +G +  S S  S L++ CL+ +S++  K +HA  LKLGLN  T+LGNRCL L
Sbjct: 188 MYPLLKQAQGPY-PSLSCCSLLLNHCLSQKSLNFVKIVHAHFLKLGLNTYTYLGNRCLDL 247

Query: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
           Y  FG ++D  +VF DI  KN  SWNICLKGL + G    A ++FD MP RD+VSWN M+
Sbjct: 248 YSEFGHINDALKVFDDISHKNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSWNSMI 307

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
           SG  S G+ + A+++F+EMQ  G RPS +TFSIL+S++S   H KQIH  MIRSGVD+ N
Sbjct: 308 SGYASCGYLSHALELFVEMQGTGVRPSGFTFSILMSLVSSSPHAKQIHCRMIRSGVDLDN 367

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
           VVLGNSLI++YGK GLV+Y F +   M++ DVISWNSLI  CH +G   LAL QF+ MR 
Sbjct: 368 VVLGNSLINIYGKLGLVEYAFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFYRMRG 427

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
               PDQFT S+++S+CS L++L+ GKQ  AFCFKMGF  NSI+ SAAIDLFSKCN L D
Sbjct: 428 AELLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLED 487

Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           +++LF++ +QWD  LC++MISS A H    +++ LFV  LR+N+RPT   +SS+LSS+S+
Sbjct: 488 SVRLFKKQDQWDSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSI 547

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           F P+++G+QIH+LV KLGFESD VV +SLV+MYAK G I +A+ +F +M  +DL+SWNT+
Sbjct: 548 FLPVEVGNQIHSLVPKLGFESDAVVANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTI 607

Query: 421 IMGLVNNGKYFEALGTL-ENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
           +MGL   G+    +    E L REG++ DRITL  VLLAC++   VDEG+ IFS+ME + 
Sbjct: 608 MMGLTYYGRVSLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVDEGIKIFSSMEMEF 667

Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
           GV P  EHY CVV++LS+AGK KEA++IIET  C+ TS  W S+L ACAI+GD+  IE V
Sbjct: 668 GVKPGEEHYACVVEMLSKAGKLKEAIDIIETMPCRTTSDIWRSILSACAIYGDLQIIEGV 727

Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
           A+++M  E Q+SLPY VLA+ Y  RGRW+S VR+ KA+EN   ++    SW+ I+++VY 
Sbjct: 728 AKKIMDRESQTSLPYLVLAQAYQMRGRWDSMVRMRKAVENRGTKEFIGHSWIGIRNNVYT 787

Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
           F  ++LQH GG+     L L+VWE+E
Sbjct: 788 FASNQLQHYGGKDLYLVLNLLVWEME 812

BLAST of CmoCh04G025240 vs. TAIR10
Match: AT1G43980.1 (AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 581.6 bits (1498), Expect = 5.7e-166
Identity = 288/607 (47.45%), Postives = 409/607 (67.38%), Query Frame = 1

Query: 18  HYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDI 77
           ++S L+++ L S+S  +AK +HAQLL+ G    T+ GNRCLQLY   G V +  ++F DI
Sbjct: 6   YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65

Query: 78  KEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFL 137
            +KN ++WN+CLKGLF+ GY+N A +LFDEMPERD+VSWN M+SG VS GF    + VF 
Sbjct: 66  PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125

Query: 138 EMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKFGLV 197
           +MQ    RP+E+TFSIL S+++C  HG+QIHG+ I SGV   N+V+ NS++DMY + G+ 
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185

Query: 198 DYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMISLC 257
           DY   +F +ME  DV+SWN LIL C  SG   +AL+QF+LMR     PD++TVS+++S+C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245

Query: 258 SFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEEANQWDQALCD 317
           S L+EL  GKQ LA C KMGF SNSI+L A ID+FSKCN L D+++LF E  +WD  LC+
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305

Query: 318 AMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKL 377
           +MI S +WH    D++ LF+ A+ +++RP   T SSVLSS++    LD G+ +H+LV+KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 365

Query: 378 GFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTL 437
           GF+ DT V +SL+EMY K G +D AM VF     +DLI WNT+IMGL  N +  E+L   
Sbjct: 366 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 425

Query: 438 EN-LVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLS 497
              L+ + +  DR+TL G+L+AC +AGFV+EG+ IFS+ME  HGV P NEHY C+++LL 
Sbjct: 426 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 485

Query: 498 RAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSV 557
           R G   EA +I +    +P+S  W  +L A    GD    E VA+ +++ EP+SS PY V
Sbjct: 486 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 545

Query: 558 LARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISA 617
           L ++Y    RWE++V++  AM     +  +  S + I+  V++F+ D+LQ  GG    + 
Sbjct: 546 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCAL 605

Query: 618 LELIVWE 624
           L+L+ W+
Sbjct: 606 LDLLSWD 611

BLAST of CmoCh04G025240 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 377.5 bits (968), Expect = 1.6e-104
Identity = 220/658 (33.43%), Postives = 356/658 (54.10%), Query Frame = 1

Query: 17  SHYSYLIDQCLASR-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 76
           S ++ L+D C+ S+ S    + +HA ++K G +N  F+ NR +  Y   G + D  +VF 
Sbjct: 20  SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79

Query: 77  DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
            + ++NI +WN  + GL + G+++ A +LF  MPERD  +WN M+SG        +A+  
Sbjct: 80  KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139

Query: 137 FLEMQDAGFRPSEYTFSILLSV---MSCPSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYG 196
           F  M   GF  +EY+F+ +LS    ++  + G Q+H S+I     +S+V +G++L+DMY 
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199

Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSI 256
           K G V+    +F  M   +V+SWNSLI    ++G +V AL+ F +M  +   PD+ T++ 
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259

Query: 257 MISLCSFLQELELGKQFLAFCFKMGFTSNSIILS-AAIDLFSKCNSLRDAMQLFE----- 316
           +IS C+ L  +++G++      K     N IILS A +D+++KC+ +++A  +F+     
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319

Query: 317 --------------------------EANQWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
                                     +  + +    +A+I+    +G   +++ LF    
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379

Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVTSSLVEMYA 436
           RE++ PT  + +++L + +    L LG Q H  VLK GF      E D  V +SL++MY 
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439

Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLENLVREGVVADRITLAG 496
           K G ++    VF  M  RD +SWN MI+G   NG   EAL     ++  G   D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499

Query: 497 VLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQ 556
           VL AC HAGFV+EG + FS+M    GV P  +HYTC+VDLL RAG  +EA ++IE    Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559

Query: 557 PTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLARVYAARGRWESTVRVS 616
           P S  W SLL AC +H ++   + VAE+++++EP +S PY +L+ +YA  G+WE  + V 
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619

Query: 617 KAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALELIVWEVEYGNEHEQ 633
           K+M      K   CSW+ I+ H + F      H   +   S L++++ E+    +H +
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676

BLAST of CmoCh04G025240 vs. TAIR10
Match: AT3G53360.1 (AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 319.7 bits (818), Expect = 4.1e-87
Identity = 178/594 (29.97%), Postives = 309/594 (52.02%), Query Frame = 1

Query: 19  YSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFGDIK 78
           +  +I  C +S  V + K +HAQ++KL  +++    N  + +YV F  + D  RVF  I 
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI- 230

Query: 79  EKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
                                         P +D++SW+ +++G    GF  +A+    E
Sbjct: 231 ------------------------------PMKDLISWSSIIAGFSQLGFEFEALSHLKE 290

Query: 139 MQDAG-FRPSEYTFSILLSVMSC---PSHGKQIHGSMIRSGVDVSNVVLGNSLIDMYGKF 198
           M   G F P+EY F   L   S    P +G QIHG  I+S +   N + G SL DMY + 
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350

Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRATGHSPDQFTVSIMI 258
           G ++    +F  +E+ D  SWN +I G   +G++  A++ F  MR++G  PD  ++  ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410

Query: 259 SLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRDAMQLFEE-ANQWDQ 318
              +    L  G Q  ++  K GF ++  + ++ + +++ C+ L     LFE+  N  D 
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470

Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
              + ++++   H    + + LF   L     P  IT+ ++L      + L LGSQ+H  
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530

Query: 379 VLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
            LK G   +  + + L++MYAK G +  A ++F  M +RD++SW+T+I+G   +G   EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590

Query: 439 LGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVD 498
           L   + +   G+  + +T  GVL ACSH G V+EGL +++TM+ +HG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650

Query: 499 LLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLP 558
           LL+RAG+  EA   I+    +P    W +LL AC   G+++  ++ AE ++K++P +S  
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710

Query: 559 YSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQH 608
           + +L  ++A+ G WE+   +  +M+    +K+   SW+ I+D ++ F  + + H
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732

BLAST of CmoCh04G025240 vs. TAIR10
Match: AT3G02010.1 (AT3G02010.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 302.8 bits (774), Expect = 5.1e-82
Identity = 172/567 (30.34%), Postives = 298/567 (52.56%), Query Frame = 1

Query: 65  GPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCV 124
           G VH F    G      +   N+ LK       ++ A  LF+E+PE+D V++N +++G  
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226

Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVMSCPSH--GKQIHGSMIRSGVDVSNV 184
             G   +++ +FL+M+ +G +PS++TFS +L +V+       G+Q+H   + +G    + 
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286

Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRAT 244
            +GN ++D Y K   V    ++F  M ++D +S+N +I    ++     +L+ F  M+  
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346

Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIIL--SAAIDLFSKCNSLR 304
           G     F  + M+S+ + L  L++G+Q    C  +  T++SI+   ++ +D+++KC    
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406

Query: 305 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
           +A  +F+   Q       A+IS     G     + LF      NLR    T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466

Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
            F  L LG Q+H  +++ G   +    S LV+MYAK G I +A++VF +MP R+ +SWN 
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526

Query: 425 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 484
           +I    +NG    A+G    ++  G+  D +++ GVL ACSH GFV++G   F  M   +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586

Query: 485 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 544
           G+ P  +HY C++DLL R G+F EA  +++    +P    W S+L+AC IH + +  ER 
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646

Query: 545 AERVMKLEP-QSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVY 604
           AE++  +E  + +  Y  ++ +YAA G WE    V KAM     +KV A SWV +   ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706

Query: 605 AFQDDRLQHLGGESFISALELIVWEVE 626
            F  +   H  G+  +  +  +  E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730

BLAST of CmoCh04G025240 vs. TAIR10
Match: AT3G49710.1 (AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 301.2 bits (770), Expect = 1.5e-81
Identity = 192/599 (32.05%), Postives = 312/599 (52.09%), Query Frame = 1

Query: 16  FSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYVLFGPVHDFFRVFG 75
           F  +  L+ + +A R +   K++HA  +K  + ++T+L N  + LY   G +      F 
Sbjct: 8   FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 76  DIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 135
             +E N+ S+N+ +K   +   ++ AR LFDE+P+ D VS+N ++SG   +     AM +
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127

Query: 136 FLEMQDAGFRPSEYTFSILLSVMSCPSHG--KQIHGSMIRSGVDVSNVVLGNSLIDMYGK 195
           F  M+  GF    +T S L++   C      KQ+H   +  G D  + V  N+ +  Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSV-NNAFVTYYSK 187

Query: 196 FGLVDYMFVMFYSMEKV-DVISWNSLIL--GCHRSGFSVLALNQFFLMRATGHSPDQFTV 255
            GL+     +FY M+++ D +SWNS+I+  G H+ G   LAL +  + +  G   D FT+
Sbjct: 188 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK--GFKIDMFTL 247

Query: 256 SIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKC---NSLRDAMQLFEE 315
           + +++  + L  L  G+QF     K GF  NS + S  ID +SKC   + + D+ ++F+E
Sbjct: 248 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 307

Query: 316 ANQWDQALCDAMISSLAWHGHW-RDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDL 375
               D  + + MIS  + +     +++  F    R   RP   +   V S+ S  +    
Sbjct: 308 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 367

Query: 376 GSQIHNLVLKLGFESDTV-VTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLV 435
             QIH L +K    S+ + V ++L+ +Y K G + +A  VF  MP  + +S+N MI G  
Sbjct: 368 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 427

Query: 436 NNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTN 495
            +G   EAL   + ++  G+  ++IT   VL AC+H G VDEG   F+TM+    + P  
Sbjct: 428 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 487

Query: 496 EHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMK 555
           EHY+C++DLL RAGK +EA   I+    +P S  W +LL AC  H +M   ER A  +M 
Sbjct: 488 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 547

Query: 556 LEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVI--KDHVYAFQD 603
           ++P ++ PY +LA +YA   +WE    V K+M     +K   CSW+ +  K HV+  +D
Sbjct: 548 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602

BLAST of CmoCh04G025240 vs. NCBI nr
Match: gi|449453105|ref|XP_004144299.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 980.3 bits (2533), Expect = 1.6e-282
Identity = 485/632 (76.74%), Postives = 540/632 (85.44%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH  L  L GAH+A  SHYS LI +CL   SVH AKTIH QLLKLGL++NTFL NRCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQL 60

Query: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
           Y LFGPVHD  +VF  IK+KNI+SWNICLKG+FRFG V+GAR+LFD MPERDIVSWN M+
Sbjct: 61  YALFGPVHDVLKVFDGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
           SG VSSGF N AM V LEMQ+AGFRPSEYTFSILLS++S   HGKQ+HGSMIRSGVDVS+
Sbjct: 121 SGYVSSGFGNSAMGVSLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
           +VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGF VLALNQFFLMR 
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
           T HSPDQFT+S++IS+C  LQELELGKQ  AFCFKMGFTSNSI+LSA IDLFSKC+SL+ 
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           A+QLFE+ NQWD  LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSSISV
Sbjct: 301 AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISV 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           FTP++LGSQIHNLVLKLGF+SD +VTSSLV+MYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLACS+AG V+EGL IFS M  +HG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
           VVP NEHY+CVV+LLSRAGKF+EAVNII+TT  QPTSTFW SLL  CAIHGD+  IE+VA
Sbjct: 481 VVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
           E +MKLEPQSSLPYSVLA+ YA R +WES VRV K  ENIA QKVKACSW+V KD+ YAF
Sbjct: 541 EWMMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAF 600

Query: 601 QDDRLQHLGGESFISALELIVWEVEYGNEHEQ 633
           QDD+LQ L  E+ IS LELI+WE+EYG +HEQ
Sbjct: 601 QDDQLQLLSRENIISVLELIIWEIEYGIDHEQ 632

BLAST of CmoCh04G025240 vs. NCBI nr
Match: gi|659081917|ref|XP_008441575.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 972.6 bits (2513), Expect = 3.3e-280
Identity = 482/634 (76.03%), Postives = 540/634 (85.17%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH  L  L GAH+A  SHYS LI QCL   SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120
           Y LFGPVHD  + F  IK+KNI+SWNICLKG+FRFG V+  R+LFD MPERDIVSWN M+
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180
           SG VSSGFA  AM + LEMQ+AGFRPSEYTFSILLS++S   HGKQ+HGSMIRSGVDVS+
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240
           +VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGF VLALNQFFLMR 
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300
           T HSPDQFT+S++IS+C  LQELELGKQ  AFC KMGFTSNSI+LSA IDLFSKC+SL+ 
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           A+QLFE+ NQ D+ LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           FTP++LGSQIHNLVLKLGFE D +V SSLV+MYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLACS+AGFV+EGL IFSTM  +HG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540
           VVP+NEHY+CVV+LLSRAGKF+EAVNII+TT  QPTSTFW SLL  CAIHGD+  IE+VA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

Query: 541 ERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAF 600
           E VMKLEPQSSLPYSVLA+ YA R +WES VRV    ENIAAQKVKACSW+V KD  YAF
Sbjct: 541 EWVMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF 600

Query: 601 QDDRLQHLGGESFISALELIVWEVEYGNEHEQYV 635
           +DD+LQ L  E+FIS LELI+WE+EYG ++EQY+
Sbjct: 601 EDDQLQLLLRENFISVLELIIWEIEYGIDYEQYL 634

BLAST of CmoCh04G025240 vs. NCBI nr
Match: gi|645264661|ref|XP_008237784.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Prunus mume])

HSP 1 Score: 745.0 bits (1922), Expect = 1.1e-211
Identity = 360/626 (57.51%), Postives = 468/626 (74.76%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH   K   G H+ S S+YS+LID CL+ +S++ AK IHAQL+K+G N++TFLGNRCL +
Sbjct: 1   MHSFSKQFHGLHKTSLSYYSHLIDHCLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDV 60

Query: 61  YVLFG-PVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCM 120
           Y  FG  ++D  +VF +I +KNIVSWNICLKG  RFG +  A N+F EMP RD+VSWN M
Sbjct: 61  YFRFGNTLYDALKVFDEITDKNIVSWNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSM 120

Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVS 180
           +SGCVS GF + A  +F +MQ AG RPSEYTFSI+ S+++C  HGKQIHG MIR+G+++S
Sbjct: 121 ISGCVSGGFFDNAFCLFSKMQIAGMRPSEYTFSIVTSLVTCSCHGKQIHGGMIRNGMNLS 180

Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMR 240
           N++LGNSLIDMYGK G VDY F +F++ME+VD+ISWNSLI GCHRSG++ LAL+QFF MR
Sbjct: 181 NLILGNSLIDMYGKLGCVDYAFGVFFAMEEVDIISWNSLISGCHRSGYAELALDQFFQMR 240

Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLR 300
           +T HSPD+FT+S +I++C  L  LE GKQ  AFC K+GF SNSI+ SAAIDLFSKCN L 
Sbjct: 241 STKHSPDEFTISSVINVCCNLPNLEKGKQIFAFCLKVGFLSNSIVSSAAIDLFSKCNRLE 300

Query: 301 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
           DA++LFEE + WD A+C++MISS A H    D++ LFV  LRENLRPT  TLSS+L+S  
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYARHDCVEDAVQLFVLTLRENLRPTEFTLSSLLNSAP 360

Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
           +F P +LGSQ+H+LV+KLGFESD +V SSL++ Y+KVGLID AMK+F ++  +DL SWNT
Sbjct: 361 IFLPAELGSQMHSLVVKLGFESDPIVASSLIDFYSKVGLIDYAMKIFANVGVKDLTSWNT 420

Query: 421 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
           MIMG+ +NGK FEAL   E L+ EG+  D++TLAGVL AC+  G VDEG+ +F +M  ++
Sbjct: 421 MIMGMAHNGKVFEALNIFEELISEGIAPDKLTLAGVLFACNLGGLVDEGMTMFLSMGEEY 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
           G+VP +EHY  +VDLLS  GK KEA++I+     +P+S  W S+L AC IHGD    E V
Sbjct: 481 GIVPQDEHYMSIVDLLSSTGKLKEAIDIVAEMPYEPSSMIWESILRACVIHGDFKLTETV 540

Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
           A+R+M+ E QSSLPY VLAR Y  RGRWES +RV KAM+    + V  CS + I++HVY 
Sbjct: 541 AQRMMQSEAQSSLPYLVLARAYEMRGRWESMIRVRKAMKLKGVRNVIGCSKIGIQNHVYT 600

Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
           F+ D+LQ   G+     L L+ WE+E
Sbjct: 601 FKADQLQPHRGKDIYLILRLLCWEME 626

BLAST of CmoCh04G025240 vs. NCBI nr
Match: gi|694430780|ref|XP_009342851.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 743.4 bits (1918), Expect = 3.2e-211
Identity = 363/626 (57.99%), Postives = 472/626 (75.40%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH   K L G H+ S S+YS LID CL+ +SV+I K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1   MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNIVKIIHAQLIKVGFNSHTFLGNRCLDV 60

Query: 61  YVLFGP-VHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCM 120
           Y  FG  +HD  +V+ +I EKN+VSWNICLKGL RFG +  AR++F EMPERD+VSWN M
Sbjct: 61  YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLSRFGEIQKARHMFAEMPERDVVSWNSM 120

Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVS 180
           +SG VS GF + A+++F +MQ AG RPSEYTFSI++++++   +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180

Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMR 240
           NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+  LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240

Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLR 300
           AT ++PD+FT+S +I++C  L +LE GKQ  AFCFK+GF SNSI+ SAAIDL SKCN L 
Sbjct: 241 ATEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300

Query: 301 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
           DA++LFEE + WD A+C++MISS A HG   D + LFV  LRENLRPT  TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDVVQLFVLTLRENLRPTEFTLSSMLSSVS 360

Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
           +F P + GSQIH+LV+KLGFESD +V SSLV++Y+K GL++ AMK+F++M  +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420

Query: 421 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
           +IMGL +NGK FE L   + LV +G   D +TLAGVLLAC+  GF++EG+ IF T+E ++
Sbjct: 421 IIMGLAHNGKVFETLSIFKELVSKGTAPDNLTLAGVLLACNFGGFIEEGMTIFLTIEKEY 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
           G+VP  EHY  +VDLL RAGK +EA++++     +  S  W S+L AC IHGD    ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540

Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
           A+R+MKL PQSSLPY VLAR Y  RG+WES + V KAM     + V  CSW+ I++HVY 
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600

Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
           F  ++LQ   G+     L L+  E+E
Sbjct: 601 FNAEQLQPPRGKDIYLILRLLSSEME 626

BLAST of CmoCh04G025240 vs. NCBI nr
Match: gi|694362310|ref|XP_009360668.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 740.7 bits (1911), Expect = 2.1e-210
Identity = 361/626 (57.67%), Postives = 469/626 (74.92%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH   K L G H+ S S+YS LID CL+ +SV+  K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1   MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNFVKIIHAQLIKVGFNSHTFLGNRCLDV 60

Query: 61  YVLFGP-VHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCM 120
           Y  FG  +HD  +V+ +I EKN+VSWNICLKGL RFG +  AR++F EMPERD+VSWN M
Sbjct: 61  YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLGRFGEIQKARHMFAEMPERDVVSWNSM 120

Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVS 180
           +SG VS GF + A+++F +MQ AG RPSEYTFSI++++++   +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180

Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMR 240
           NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+  LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240

Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLR 300
            T ++PD+FT+S +I++C  L +LE GKQ  AFCFK+GF SNSI+ SAAIDL SKCN L 
Sbjct: 241 GTEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300

Query: 301 DAMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
           DA++LFEE + WD A+C++MISS A HG   D++ LFV  LRENLRPT  TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDAVQLFVLTLRENLRPTEFTLSSMLSSVS 360

Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
           +F P + GSQIH+LV+KLGFESD +V SSLV++Y+K GL++ AMK+F++M  +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420

Query: 421 MIMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKH 480
           +IMGL +NGK FE L   + L  +G   D +TLAGVLLAC+  GF++EG+ IF TME ++
Sbjct: 421 IIMGLAHNGKVFETLSIFKELASKGAAPDNLTLAGVLLACNFGGFIEEGMTIFLTMEKEY 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERV 540
           G+VP  EHY  +VDLL RAGK +EA++++     +  S  W S+L AC IHGD    ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540

Query: 541 AERVMKLEPQSSLPYSVLARVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYA 600
           A+R+MKL PQSSLPY VLAR Y  RG+WES + V KAM     + V  CSW+ I++HVY 
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600

Query: 601 FQDDRLQHLGGESFISALELIVWEVE 626
           F  + LQ   G+     L L+  E+E
Sbjct: 601 FNAEELQPPRGKDIYLILRLLSSEME 626

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR73_ARATH9.2e-16646.96Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop... [more]
PP151_ARATH2.9e-10333.43Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP280_ARATH7.2e-8629.97Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
PP206_ARATH9.1e-8130.34Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
PP274_ARATH2.6e-8032.05Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
M5W3X4_PRUPE7.0e-20558.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1[more]
B9H7L3_POPTR3.4e-19955.36Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
A5C139_VITVI3.7e-19858.52Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1[more]
A0A072V224_MEDTR4.5e-19655.04PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV... [more]
A0A0B2SRT0_GLYSO4.4e-19153.51Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... [more]
Match NameE-valueIdentityDescription
AT1G43980.15.7e-16647.45 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G13600.11.6e-10433.43 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53360.14.1e-8729.97 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02010.15.1e-8230.34 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G49710.11.5e-8132.05 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449453105|ref|XP_004144299.1|1.6e-28276.74PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ... [more]
gi|659081917|ref|XP_008441575.1|3.3e-28076.03PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ... [more]
gi|645264661|ref|XP_008237784.1|1.1e-21157.51PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ... [more]
gi|694430780|ref|XP_009342851.1|3.2e-21157.99PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-... [more]
gi|694362310|ref|XP_009360668.1|2.1e-21057.67PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G025240.1CmoCh04G025240.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 185..209
score: 0.029coord: 415..445
score: 3.1E-5coord: 387..413
score: 0.019coord: 213..240
score: 0.59coord: 487..508
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 112..156
score: 5.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 415..448
score: 1.7E-4coord: 83..114
score: 8.5E-5coord: 114..148
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 112..146
score: 12.529coord: 484..514
score: 5.974coord: 448..483
score: 7.267coord: 382..412
score: 8.44coord: 281..311
score: 6.533coord: 312..346
score: 8.298coord: 15..49
score: 5.645coord: 516..546
score: 5.415coord: 211..245
score: 9.087coord: 246..280
score: 5.437coord: 413..447
score: 9.92coord: 81..111
score: 8.868coord: 180..210
score: 6.456coord: 550..584
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 399..443
score: 8.7E-5coord: 513..572
score: 8.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 73..591
score: 7.1E
NoneNo IPR availablePANTHERPTHR24015:SF613SUBFAMILY NOT NAMEDcoord: 73..591
score: 7.1E