Cp4.1LG13g04380 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g04380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Cp4.1LG13 : 6191627 .. 6196371 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTGTCTGCGGCCTCAATACTCAATCGCCTTCTTTCCCATAAGAACCTCAGCGCCAGAACCCAACCCACCGGCGCCAAAGCCGCTGCCACCACAATCCTCAAATACCTAGAAGAGGGTCGCCTCCGAAAAGCTGTCTCGGTTCTGTTTGATTCCCCCTTCCCTTTTCCTCATCCCTTGTATGCTCGCCTCTTCCAAATTTGTTCTTCCACTCGCGCTCTTGTTGAAGCTCGAAAGGTTGAATCTCATTTGGTTACGTTTTGCCCCACGCCGCCGATTTTCTTGTTGAATCGGGCGATTGAGGCGTATGGTAAATGTGGGTGTTTGGAGGATGCGAGGGAGCTGTTCCAGGAAATGCCTCAGAGAGATGGGGGATCTTGGAATGCGATGTTAACGGCGTATACGCAGAATGGGTTTGCTTTGGAAGCTTTGAATTTATTTCTGAATATGAATAAATCCGGTGTTTATGCTACTGAAATAACTTTAGCTAGTGTACTTGGGTCTTGCGGTTCTGTTTTGGCTCTTCACCTCTCTAGGCAAGTTCACGGGCATATTGTGAAATCTGGCTTTGTTGGCAATGTGATTCTTGAGAGCTCGCTTGTTGATGTCTATGGAAAGTGTAGGCTTATGAATGATGCACGTAGCATGTTTGATGAAATCCAGAATCGAAATGATGTTTCCTGGAATGTTATTGTTAGGCGCTATCTTGAGGTGGACGATGGTAAAATGGCAGTGTCAATGTTTTTCCAAATGTTCCGAGAGGCAGTGATGCCATTGAGTTTTACTTTTTCCAATGCTCTGATTGCTTGTTCAAGTATGGCAGCACTCATAGAAGGTAGGCAAATTCATGGTATTGTAGTGAAAGTAGGATTGGAAGAGGATGAAGTTATTTCGAGCTCTTTAATTGACATGTATGTGAAATGTGGAACATTAGAAAATGCTCACCAAGTATTTACCCAACCCAGTTCCAGAAATCTTATTTCTTGGACTTCCATGGTATATGGATATGCAATGTCTGGGGAAGTTCTAAAAGCTAGGGAGCTTTTCAATGAAATGCCCGAACGCAATGTGATTTCATGGAATGCTATGTTGGCAGGGTATATTCATTCCGGTCAATGGGCAGAGGCACTAGACTTTTTCCACTTGATGCACAATTCGATTAAGGATGTCGATCACGTTACTCTTCGCCTGATATTGAATGTGTGTACTGGCCTTTTAGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTATCTATAGAATTGGTTTCTATGCTAATCTCTATATTGGTAATGCCCTCCTTGACATGTATGGTAAATGTGGGAACTTGAAAAGTGCCAGAGTTTGGTTTTACCAAATGAGTCAATGGCGGGATAAAGTCTCCTGGAATGCTCTACTTACTACCTATGCTCGTCACGGCATGAGTGAACAGGCTATGACAATTTTCTCAGAGATGCAATGGGAAGCAGCTCCCAGTAAATTTACCTTTGCAACCCTTTTAGCAGCCTGTGCAAACACCTTTGCATTAGATCAAGGCAAACAAATCCATGGCTTCATGGTTAGAAATAATTATGAGATAGACATTGCAGTTAGTGGAGCTTTAGTTGATATGTACTGTAAATGCCGACAACTTGAGTACGCCCTCAAGGTTTTTGAAAATGCAGCTTCGCGCGATGTGGTTCTGTGGAACTCCATAATTTTAGGATGTTGTCACAACGGAAGGGGTATGATAGTAATCGAATTGTTTCAAATGATGATGATGGAGAAAGGCATTAGCCCGGACCATGTGACCTTCCAAGGTATTTTGCTTGCTTGTGTCTATGAAAATCTCGTTGAGTTAGGTAGGCAGTATTTCGATTCAATGAGTGACAAGTTCTGTATCATACCTCGATTAGAGCACTATGAATGCATGATCGAGCTCTATGGCCGACATGGAAACATGGATGAGCTTGAAAAATTTATCAACAATATGCCCTTTGATCCTACTGTTTCAATGCTAGAAAAAGTCCTTGATGCATGTAGAAAACACGGACACTCGAGGTTGGGAGAATGGGTAGCTATTAGACTAAATGAGCAGAATCTTTACCAGTGAAATCATGAAAGCAACAAAATCTATCCCATCAACTCAAGCATTCATGGTTTGAAACCATTGTGGAAAGTTGTCTCTCATTCATTCATTCATTGTAGAATCCAAAATTTTTGGCTATGCTCAACAGCGTCAGCAATCAAAGAGAAATTTAGATCCAAGATCTGAATGAGAAGATACAAAGATGTTTATTGCTCATTACAGGATCAAGTGTTCGCTCCAGCCTATTGAAAAGCAATGCATGTTCAAGAGCTCTGTGAGAAGAATCCAGGATCTCGATCTACCCAACATGTTGACTGTCACAATCCCCATCAAGTATGTGATACACCCACTTAACTTTCGATGCTTATTTAAATAGGAAATTTGTAAACCTAGTCCATCGAGATATCGTTATGAGTTCGAAGCATGCTTAAAGAAAGACAGGCCGTATTCTATAATTTGAACAAACAAGAACGACAAACTCTGGTGATACTTTGCGTTTCTGCTTGAAGGATCAGCTGTTTTAGTTGCCTTGACTGATATGTAGCAGAACACAAGCTGGTTCTTTATTCTTTAACATAAATATCTTCAAATGCCTAAATTAAACGATCTGATCGAAAATGAGATGAGAACAGAACATGACAGACAGTTTGCTGACAGAAAAGTCACTTTAATGTTAATTACCTTGTACTTTATTTTGGCTCTTGGCTTACTCTTGTTGGTGAGGGATAGGATAAATTACTAGAATTTATGGAACTGATATTGTATGTCAAAGATCATATTGTATTCAGAAAATCTTATTGAGGTGTATCAATATCCCTTTTCAATTCATATGCATTTTCGTTAGGATGATTTATCTGTTTTTCTTTTAAATGCTTTGTTCTTCTCCAGTTCCCATGCAAGCTCTGATTCCTCTCACAAGTTAAATGAATAATAATAGAAAAAACTCGATTCGTTTTTTATGTTACCGTAGCTAATGAGATGGTTTAGACTATTTTGAAAACTTCAGCAGTTAAGAAAAGAAATTAAGGCACATTTGGTAAGGTTTCATTTTTGATTTCTTGTTTTTCATTTTTTCGTTCTTTGTTTCCTCTTTTTTAACAAAGAAAAATGTATCTTGTTGTTGTTGTTGTTTTTTTTTTTTTTTGAAAAAATATAAACATATTTGATAACCTAAAAACTTGTGAGAGGAAAATGAAACTTTGCTATCAAATGTAACATATTTATAACATACATTAAAAATATAAAAAAAATTACACGAAAATATTTGATACACCACTTGGCGGCATTAAAAGAAGAATATTGTATCCTGGAACATATGCTTGAAGGGTATATTTAGATTTGGCGATGTCAAAAGTGCACGCCATCAGGTAATGCCTGAGAAGGACATTATTTCTTGGAACTCAACGATTTCTGGTTCTGTTTGATCTGGAATTGCTAATAATGCTACGGACGTTTTTCTGGAAATGAAAAACGCTGGTTTTAGACCAAGTTAATATACCTTCTCCATTTTGCTTTCACTTGTGTCGTATGCTTGTCTGGTAAGCAAATTCTTGGCAGTATGGTTCGAAGTGGTGTGGATGCGTCAAGCGTGGTGCTCAGAAATTCATCGATTAATATGCAGTGGAAATTTTGGCCTTGTTGATTATATGTTTGCATATTTTTTAGTATGGAAAAGGTGGATGTTATCTCTTGAAACTCTTTGATTTTGGGCTGCCACAGACCAGGCTTAAGAGTATTGGCACTATATCAGTTCTCTCTAGTATCCCTCTCCCGATCAGTTCACTGTATTAATCGTGACCAGTGTCTGTTGTCTCCAAGAGTTGGAACTGGGTAAGCAAATATTTTCTTTATGTTTCAAGATGGTATTTAATTCTAACGGTATTGGACTCAGTGCTGCAATTGACTTGTTTTCCAAATGCGACAGCTTGAACGTTGCTGTGTAGCTTTTTGGAGCTCTTGTCATGTCATGCTCTCAAGCATTGCATGGCATGGTCATCAGAGCGATTCCATGTGGCTTTTTGTGCACTCCATAAGGGAGAACCTCAGGCCAATTGAGATTACACTGAGCAGTGTGCCGAGCTCCATTTCAGTCTTCACACCTGTGAGTTGGGTAGTCAAATTCATAATTTGGTTCTGAAGTTGGGTTTCGAATCTGAAGCCATTGTCTCTCGTTCGCTGGTAAGCATGTATCCTGAACCACATGAAAGTCTTTATAGATATGTCCGTTAGAGATTTGATATCATGGAACACTATGATTATGGTTCTGGTTAACAATGTATACTTTGAAGCCCTACGAACTTTTAATAAATTGGTCAGGGAAGGTGTACTGCCTGATAGGATAACTCTAGCTGGAGTCTTATTAGCTTGCAGTCATGCTGGTTTTGTTGAGGATGGGATAGTCACCTTCTCTACAATGACATGAACACGGAGTCGTGCTGAGGAATGAACATTATTCTTTGTAGTAGTTGGGCTGGAAATTTGAAGCAGTTATTATTATTAAAACACCAAAATGCCAATCTACTTCTACACTTTGCAAGTCACTTCTTGGTGTCTGTGCAATTCATGGAGACCTAAAAGTTGTTGAAAGAGTTGCAGAGAGGGTGGTGAAGCTGGAACTGCAATCATCCTTACTGTATTCGGTACGGGTCGGTGCAGGCTCAAGCATTTGCAATGAG

mRNA sequence

ATGGGTAACCTCAGCGCCAGAACCCAACCCACCGGCGCCAAAGCCGCTGCCACCACAATCCTCAAATACCTAGAAGAGGGTCGCCTCCGAAAAGCTGTCTCGGTTCTGTTTGATTCCCCCTTCCCTTTTCCTCATCCCTTTGTACTTGGGTCTTGCGGTTCTGTTTTGGCTCTTCACCTCTCTAGGCAAGTTCACGGGCATATTGTGAAATCTGGCTTTGTTGGCAATGTGATTCTTGAGAGCTCGCTTGTTGATGTCTATGGAAAGTGTAGGCTTATGAATGATGCACGTAGCATGTTTGATGAAATCCAGAATCGAAATGATGTTTCCTGGAATGTTATTGTTAGGCGCTATCTTGAGGTGGACGATGGTAAAATGGCAGTGTCAATGTTTTTCCAAATGTTCCGAGAGGCAGTGATGCCATTGAGTTTTACTTTTTCCAATGCTCTGATTGCTTGTTCAAGTATGGCAGCACTCATAGAAGTTAGTGGAGCTTTAGTTGATATGTACTGTAAATGCCGACAACTTGAGTACGCCCTCAAGGTTTTTGAAAATGCAGCTTCGCGCGATGTGGTTCTGTGGAACTCCATAATTTTAGGATGTTGTCACAACGGAAGGGGTATGATAGTAATCGAATTGTTTCAAATGATGATGATGGAGAAAGGCATTAGCCCGGACCATGTGACCTTCCAAGGTATTTTGCTTGCTTGTGTCTATGAAAATCTCGTTGAGTTAGGTAGGCAGTATTTCGATTCAATGAGTGACAAGTTCTGTATCATACCTCGATTAGAGCACTATGAATGCATGATCGAGCTCTATGGCCGACATGGAAACATGGATGAGCTTGAAAAATTTATCAACAATATGCCCTTTGATCCTACTGTTTCAATGCTAGAAAAAGTCCTTGATGCATGTAGAAAACACGGACACTCGAGTGAAATCATGAAAGCAACAAAATCTATCCCATCAACTCAAGCATTCATGGGTATATTTAGATTTGGCGATGTCAAAAGTGCACGCCATCAGGTAATGCCTGAGAAGGACATTATTTCTTGGAACTCAACGATTTCTGCTTTTTGGAGCTCTTGTCATGTCATGCTCTCAAGCATTGCATGGCATGGTCATCAGAGCGATTCCATGTGGCTTTTTGTGCACTCCATAAGGGAGAACCTCAGGCCAATTGAGATTACACTGAGCAGTGTGCCGAGCTCCATTTCAGTCTTCACACCTTTGGGTTTCGAATCTGAAGCCATTGTCTCTCGTTCGCTGGTAAGCATGTATCCTGAACCACATGAAAATATGTCCGTTAGAGATTTGATATCATGGAACACTATGATTATGGTTCTGGTTAACAATGTATACTTTGAAGCCCTACGAACTTTTAATAAATTGGTCAGGGAAGGTGTACTGCCTGATAGGATAACTCTAGCTGGAGTCTTATTAGCTTGCAGTCATGCTGGTTTTGTTGAGGATGGGATATTGGGCTGGAAATTTGAAGCAGTTATTATTATTAAAACACCAAAATGCCAATCTACTTCTACACTTTGCAAGTCACTTCTTGGTGTCTGTGCAATTCATGGAGACCTAAAAGTTGTTGAAAGAGTTGCAGAGAGGGTGGTGAAGCTGGAACTGCAATCATCCTTACTGTATTCGGTACGGGTCGGTGCAGGCTCAAGCATTTGCAATGAG

Coding sequence (CDS)

ATGGGTAACCTCAGCGCCAGAACCCAACCCACCGGCGCCAAAGCCGCTGCCACCACAATCCTCAAATACCTAGAAGAGGGTCGCCTCCGAAAAGCTGTCTCGGTTCTGTTTGATTCCCCCTTCCCTTTTCCTCATCCCTTTGTACTTGGGTCTTGCGGTTCTGTTTTGGCTCTTCACCTCTCTAGGCAAGTTCACGGGCATATTGTGAAATCTGGCTTTGTTGGCAATGTGATTCTTGAGAGCTCGCTTGTTGATGTCTATGGAAAGTGTAGGCTTATGAATGATGCACGTAGCATGTTTGATGAAATCCAGAATCGAAATGATGTTTCCTGGAATGTTATTGTTAGGCGCTATCTTGAGGTGGACGATGGTAAAATGGCAGTGTCAATGTTTTTCCAAATGTTCCGAGAGGCAGTGATGCCATTGAGTTTTACTTTTTCCAATGCTCTGATTGCTTGTTCAAGTATGGCAGCACTCATAGAAGTTAGTGGAGCTTTAGTTGATATGTACTGTAAATGCCGACAACTTGAGTACGCCCTCAAGGTTTTTGAAAATGCAGCTTCGCGCGATGTGGTTCTGTGGAACTCCATAATTTTAGGATGTTGTCACAACGGAAGGGGTATGATAGTAATCGAATTGTTTCAAATGATGATGATGGAGAAAGGCATTAGCCCGGACCATGTGACCTTCCAAGGTATTTTGCTTGCTTGTGTCTATGAAAATCTCGTTGAGTTAGGTAGGCAGTATTTCGATTCAATGAGTGACAAGTTCTGTATCATACCTCGATTAGAGCACTATGAATGCATGATCGAGCTCTATGGCCGACATGGAAACATGGATGAGCTTGAAAAATTTATCAACAATATGCCCTTTGATCCTACTGTTTCAATGCTAGAAAAAGTCCTTGATGCATGTAGAAAACACGGACACTCGAGTGAAATCATGAAAGCAACAAAATCTATCCCATCAACTCAAGCATTCATGGGTATATTTAGATTTGGCGATGTCAAAAGTGCACGCCATCAGGTAATGCCTGAGAAGGACATTATTTCTTGGAACTCAACGATTTCTGCTTTTTGGAGCTCTTGTCATGTCATGCTCTCAAGCATTGCATGGCATGGTCATCAGAGCGATTCCATGTGGCTTTTTGTGCACTCCATAAGGGAGAACCTCAGGCCAATTGAGATTACACTGAGCAGTGTGCCGAGCTCCATTTCAGTCTTCACACCTTTGGGTTTCGAATCTGAAGCCATTGTCTCTCGTTCGCTGGTAAGCATGTATCCTGAACCACATGAAAATATGTCCGTTAGAGATTTGATATCATGGAACACTATGATTATGGTTCTGGTTAACAATGTATACTTTGAAGCCCTACGAACTTTTAATAAATTGGTCAGGGAAGGTGTACTGCCTGATAGGATAACTCTAGCTGGAGTCTTATTAGCTTGCAGTCATGCTGGTTTTGTTGAGGATGGGATATTGGGCTGGAAATTTGAAGCAGTTATTATTATTAAAACACCAAAATGCCAATCTACTTCTACACTTTGCAAGTCACTTCTTGGTGTCTGTGCAATTCATGGAGACCTAAAAGTTGTTGAAAGAGTTGCAGAGAGGGTGGTGAAGCTGGAACTGCAATCATCCTTACTGTATTCGGTACGGGTCGGTGCAGGCTCAAGCATTTGCAATGAG

Protein sequence

MGNLSARTQPTGAKAAATTILKYLEEGRLRKAVSVLFDSPFPFPHPFVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGMIVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHSSEIMKATKSIPSTQAFMGIFRFGDVKSARHQVMPEKDIISWNSTISAFWSSCHVMLSSIAWHGHQSDSMWLFVHSIRENLRPIEITLSSVPSSISVFTPLGFESEAIVSRSLVSMYPEPHENMSVRDLISWNTMIMVLVNNVYFEALRTFNKLVREGVLPDRITLAGVLLACSHAGFVEDGILGWKFEAVIIIKTPKCQSTSTLCKSLLGVCAIHGDLKVVERVAERVVKLELQSSLLYSVRVGAGSSICNE

Homology

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BLAST of Cp4.1LG13g04380 vs. Swiss-Prot
Match: PP256_ARATH (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.3e-61
Identity = 119/281 (42.35%), Postives = 177/281 (62.99%), Query Frame = 1


Query: 47  FVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN- 106
           ++L  C  +  + + +Q HG I + G+  NVI+ ++L+D+YGKC  +  A   F ++   
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459

Query: 107 RNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------ 166
           R++VSWN ++     V   + A+S F  M  EA  P  +T +  L  C+++ AL      
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAI 519

Query: 167 ------------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRG 226
                       + + GA+VDMY KCR  +YA++VF+ AA+RD++LWNSII GCC NGR 
Sbjct: 520 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 579

Query: 227 MIVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYE 286
             V ELF M++  +G+ PDHVTF GIL AC+ E  VELG QYF SMS K+ I P++EHY+
Sbjct: 580 KEVFELF-MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYD 639

Query: 287 CMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKH 309
           CMIELY ++G + +LE+F+  MPFDP + ML ++ DAC+++
Sbjct: 640 CMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRY 678

[Close]

BLAST of Cp4.1LG13g04380 vs. Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 3.8e-46
Identity = 102/298 (34.23%), Postives = 156/298 (52.35%), Query Frame = 1


Query: 39  SPFPFPHPFVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARS 98
           SP     PFVL +C  +      +QVH  IVK GF G+V + + L+ +YG C  ++ AR 
Sbjct: 148 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207

Query: 99  MFDEIQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAA 158
           +FDE+  R+ VSWN ++   +   +   A+ +F +M R +  P  +T  + L AC+ + +
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGS 267

Query: 159 L---------------------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSI 218
           L                     + V  +L++MYCKC  L  A +VF+    RD+  WN++
Sbjct: 268 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 327

Query: 219 ILGCCHNGRGMIVIELFQMMM-MEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDK 278
           ILG   +GR    +  F  M+   + + P+ VTF G+L+AC +   V  GRQYFD M   
Sbjct: 328 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 387

Query: 279 FCIIPRLEHYECMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHSSEI 315
           +CI P LEHY C+++L  R G + E    + +MP  P   +   +LDAC K G S E+
Sbjct: 388 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444

[Close]

BLAST of Cp4.1LG13g04380 vs. Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-45
Identity = 93/286 (32.52%), Postives = 161/286 (56.29%), Query Frame = 1


Query: 43  FPHPFVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDE 102
           +P   VL +CG + A++  +Q+H  I+++ F  ++ + S+L+D+Y KC+ ++ A+++FD 
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330

Query: 103 IQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIE- 162
           ++ +N VSW  +V  Y +    + AV +F  M R  + P  +T   A+ AC+++++L E 
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390

Query: 163 -----------------VSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHN 222
                            VS +LV +Y KC  ++ + ++F     RD V W +++      
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450

Query: 223 GRGMIVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLE 282
           GR +  I+LF  M+ + G+ PD VT  G++ AC    LVE G++YF  M+ ++ I+P + 
Sbjct: 451 GRAVETIQLFDKMV-QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 510

Query: 283 HYECMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGH 311
           HY CMI+L+ R G ++E  +FIN MPF P       +L ACR  G+
Sbjct: 511 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555

[Close]

BLAST of Cp4.1LG13g04380 vs. Swiss-Prot
Match: PP377_ARATH (Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.2e-44
Identity = 102/326 (31.29%), Postives = 168/326 (51.53%), Query Frame = 1


Query: 20  ILKYLEEGRLRKAVSVLFD--SPFPFPHPFVLGS----CGSVLALHLSRQVHGHIVKSGF 79
           I ++ + G   +AV +       F  P+ F L S    C       L  Q+HG +VK GF
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF 379

Query: 80  VGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQ 139
             ++ + ++L+DVY KC  M+ A  +F E+ ++N+VSWN ++  Y  + +G  A SMF +
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439

Query: 140 MFREAVMPLSFTFSNALIACSSMAAL------------------IEVSGALVDMYCKCRQ 199
             R  V     TFS+AL AC+S+A++                  + VS +L+DMY KC  
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499

Query: 200 LEYALKVFENAASRDVVLWNSIILGCCHNGRGMIVIELFQMMMMEKGISPDHVTFQGILL 259
           +++A  VF    + DV  WN++I G   +G G   + +   +M ++   P+ +TF G+L 
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILD-IMKDRDCKPNGLTFLGVLS 559

Query: 260 ACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFINNMPFDPTV 319
            C    L++ G++ F+SM     I P LEHY CM+ L GR G +D+  K I  +P++P+V
Sbjct: 560 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 619

Query: 320 SMLEKVLDACRKHGHSSEIMKATKSI 322
            +   +L A     +     ++ + I
Sbjct: 620 MIWRAMLSASMNQNNEEFARRSAEEI 644

[Close]

BLAST of Cp4.1LG13g04380 vs. Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.5e-44
Identity = 100/289 (34.60%), Postives = 156/289 (53.98%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRN 107
           VL +  S+    L +Q+HG  +K+        E++L+  YGKC  M+    +F  +  R 
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582

Query: 108 D-VSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           D V+WN ++  Y+  +    A+ + + M +      SF ++  L A +S+A L       
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      + V  ALVDMY KC +L+YAL+ F     R+   WNS+I G   +G+G 
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
             ++LF+ M ++    PDHVTF G+L AC +  L+E G ++F+SMSD + + PR+EH+ C
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDA-CRKHGHSSEIMK 317
           M ++ GR G +D+LE FI  MP  P V +   VL A CR +G  +E+ K
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811

[Close]

BLAST of Cp4.1LG13g04380 vs. TrEMBL
Match: A0A0A0KFE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344820 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.5e-86
Identity = 160/283 (56.54%), Postives = 209/283 (73.85%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           +L  C     +   +QVHG + ++GF  N+ + ++L+D+YGKC  +  A+  F ++ Q R
Sbjct: 399 ILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWR 458

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + VSWN ++  +      + A+++F +M  E   P +FTF+  L AC++M AL       
Sbjct: 459 DKVSWNALLTAHARHGMSEQAMTIFSEMQLETD-PNNFTFATLLGACANMFALEHGKQIH 518

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      I ++GALVDMYCKCR+L+YALKVFE+ ASRDVVLWNSIILGCCHN R M
Sbjct: 519 GFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDM 578

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
           + I+LFQ+M ME+GI PDHVTFQGILLAC++ENLVELGR+YFDSMS+KFC+IPRLEHYEC
Sbjct: 579 LAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYEC 638

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHS 312
           M+ELYG+HGNMDELEKFINNMPFDPTV MLE++ +ACR+HGHS
Sbjct: 639 MVELYGQHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHS 680

[Close]

BLAST of Cp4.1LG13g04380 vs. TrEMBL
Match: A0A061FHV8_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_035294 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.4e-73
Identity = 141/281 (50.18%), Postives = 189/281 (67.26%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           VL  C  +  + + +QVHG I + GF  N+ + ++L+D+YGKC  +N AR  F ++ Q R
Sbjct: 420 VLNVCAGISDVEMGKQVHGFIYRHGFCSNIFVGNALLDMYGKCGTLNSARVWFYQMSQER 479

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + VSWN ++  Y      + A++ F +M  E+  P  FTF   L AC++M AL       
Sbjct: 480 DTVSWNALLTSYARHHRSEQAMTFFNEMQWES-RPCKFTFGTLLAACANMFALNHGKQIH 539

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      + + GALVDMYCKCR + YAL +F+ AA RDVVLWN++I GCCHNGRG 
Sbjct: 540 GFMIRNGYELDMVIRGALVDMYCKCRCVLYALAIFKEAALRDVVLWNTMIFGCCHNGRGR 599

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
            V+EL  +M  E+G+ PDHVTFQGILLAC+ E+  ELG+QYF+SMS+ +CIIPRLEHY+C
Sbjct: 600 EVLELVGLME-EEGVKPDHVTFQGILLACICEHEAELGKQYFNSMSNDYCIIPRLEHYDC 659

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHG 310
           MIE+Y R G M ELEKFI ++PF+PTV+ML +V DAC KHG
Sbjct: 660 MIEIYSRCGCMKELEKFIKSLPFEPTVAMLTRVFDACEKHG 698

[Close]

BLAST of Cp4.1LG13g04380 vs. TrEMBL
Match: A0A067JQM8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22482 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70
Identity = 136/283 (48.06%), Postives = 188/283 (66.43%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           +L  C  +  + + + VHG I + GF  N+++ ++L+D+YGKC     AR  F ++ Q+R
Sbjct: 398 LLNVCAGLSDVEIGKHVHGFIYRHGFSSNLLVGNALLDMYGKCGNFRSARVWFYQMSQSR 457

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + +SWN ++  Y      + A+ MF +M  E   P SFTF   L AC+++ AL       
Sbjct: 458 DSISWNALLTSYARHHQSEQAMVMFGEMQWE-TKPDSFTFGTLLAACANIFALDQGKQIH 517

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      I +SGALV+MYCKCR + YAL+VF + +SRD+VLWNSIILGCCHNGRG 
Sbjct: 518 GFVIRNNYEIDIVMSGALVNMYCKCRYIAYALRVFRDTSSRDLVLWNSIILGCCHNGRGK 577

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
            V++LF+ +M E+G+ PDH T QG+LLAC++E  VEL  QYFDSM  ++CIIPRLEHYEC
Sbjct: 578 EVLKLFR-VMQEEGVKPDHATIQGLLLACMFEGHVELASQYFDSMGKEYCIIPRLEHYEC 637

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHS 312
           MIE++ R+  M+ELE F+  MPFDPT  ML +V DAC++HG S
Sbjct: 638 MIEIFSRYRCMNELEDFVKGMPFDPTAPMLMRVFDACKEHGCS 678

[Close]

BLAST of Cp4.1LG13g04380 vs. TrEMBL
Match: B9SVS3_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0255040 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.9e-69
Identity = 135/283 (47.70%), Postives = 185/283 (65.37%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           +L  C  +  + + +Q HG I + GF   +++ ++L+D+YGKC  +  AR  F ++ Q+R
Sbjct: 397 LLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSR 456

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIE----- 167
           +++SWN ++  Y      + A+ +F +M  E   P +FTF   L AC+++ AL +     
Sbjct: 457 DNISWNALLTSYARHHQSEQAMMIFGEMQWET-KPSTFTFGTLLAACANIFALDQGKEIH 516

Query: 168 -------------VSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                        +SGALVDMY KCR L YAL VF  A SRDV+LWNSIILGCCHNGRG 
Sbjct: 517 GFMIRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGK 576

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
            V++LF  M  ++G+ PDHVTF G+LLAC+YE  V+L  +YF+SMSDK C+IPRLEHYEC
Sbjct: 577 EVLKLFGQME-KEGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYEC 636

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHS 312
           MIEL+ R+  M  LE F+  MPFDPT SML +V DAC++HG S
Sbjct: 637 MIELFSRYRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPS 677

[Close]

BLAST of Cp4.1LG13g04380 vs. TrEMBL
Match: F6GZT6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14940 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68
Identity = 136/283 (48.06%), Postives = 184/283 (65.02%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN-R 107
           +L  C  +  +   +QVHG I + G   N+ + ++L+ +YGKC  +   R  F ++ + R
Sbjct: 400 ILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWR 459

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + +SWN ++  +      + A+++F +M  E   P  FT    L AC+++ AL       
Sbjct: 460 DRISWNALLTSHARHGLSEEAMTIFGEMQWETT-PSKFTLGTLLSACANIFALEQGKQIH 519

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      +   GALVDMY KCR LEYALKVF+ A SRD++LWNS+ILGCCHNGRG 
Sbjct: 520 GFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGR 579

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
            V+ LF +M  E+G+ PDH+TFQGILL C+ E L  LG +YF+SMS+K+CIIPRLEHYE 
Sbjct: 580 DVLGLFGLME-EEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYES 639

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHS 312
           MIELYGRHG MDELE FI  MPF+PTV+ML +V +AC +HGHS
Sbjct: 640 MIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHS 680

[Close]

BLAST of Cp4.1LG13g04380 vs. TAIR10
Match: AT3G26540.1 (AT3G26540.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-62
Identity = 119/281 (42.35%), Postives = 177/281 (62.99%), Query Frame = 1


Query: 47  FVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN- 106
           ++L  C  +  + + +Q HG I + G+  NVI+ ++L+D+YGKC  +  A   F ++   
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459

Query: 107 RNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------ 166
           R++VSWN ++     V   + A+S F  M  EA  P  +T +  L  C+++ AL      
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAI 519

Query: 167 ------------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRG 226
                       + + GA+VDMY KCR  +YA++VF+ AA+RD++LWNSII GCC NGR 
Sbjct: 520 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 579

Query: 227 MIVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYE 286
             V ELF M++  +G+ PDHVTF GIL AC+ E  VELG QYF SMS K+ I P++EHY+
Sbjct: 580 KEVFELF-MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYD 639

Query: 287 CMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKH 309
           CMIELY ++G + +LE+F+  MPFDP + ML ++ DAC+++
Sbjct: 640 CMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRY 678

[Close]

BLAST of Cp4.1LG13g04380 vs. TAIR10
Match: AT1G59720.1 (AT1G59720.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 187.6 bits (475), Expect = 2.1e-47
Identity = 102/298 (34.23%), Postives = 156/298 (52.35%), Query Frame = 1


Query: 39  SPFPFPHPFVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARS 98
           SP     PFVL +C  +      +QVH  IVK GF G+V + + L+ +YG C  ++ AR 
Sbjct: 148 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207

Query: 99  MFDEIQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAA 158
           +FDE+  R+ VSWN ++   +   +   A+ +F +M R +  P  +T  + L AC+ + +
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGS 267

Query: 159 L---------------------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSI 218
           L                     + V  +L++MYCKC  L  A +VF+    RD+  WN++
Sbjct: 268 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 327

Query: 219 ILGCCHNGRGMIVIELFQMMM-MEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDK 278
           ILG   +GR    +  F  M+   + + P+ VTF G+L+AC +   V  GRQYFD M   
Sbjct: 328 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 387

Query: 279 FCIIPRLEHYECMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHSSEI 315
           +CI P LEHY C+++L  R G + E    + +MP  P   +   +LDAC K G S E+
Sbjct: 388 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444

[Close]

BLAST of Cp4.1LG13g04380 vs. TAIR10
Match: AT1G68930.1 (AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 185.7 bits (470), Expect = 8.1e-47
Identity = 93/286 (32.52%), Postives = 161/286 (56.29%), Query Frame = 1


Query: 43  FPHPFVLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDE 102
           +P   VL +CG + A++  +Q+H  I+++ F  ++ + S+L+D+Y KC+ ++ A+++FD 
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330

Query: 103 IQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIE- 162
           ++ +N VSW  +V  Y +    + AV +F  M R  + P  +T   A+ AC+++++L E 
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390

Query: 163 -----------------VSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHN 222
                            VS +LV +Y KC  ++ + ++F     RD V W +++      
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450

Query: 223 GRGMIVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLE 282
           GR +  I+LF  M+ + G+ PD VT  G++ AC    LVE G++YF  M+ ++ I+P + 
Sbjct: 451 GRAVETIQLFDKMV-QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 510

Query: 283 HYECMIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGH 311
           HY CMI+L+ R G ++E  +FIN MPF P       +L ACR  G+
Sbjct: 511 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555

[Close]

BLAST of Cp4.1LG13g04380 vs. TAIR10
Match: AT5G13230.1 (AT5G13230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 182.6 bits (462), Expect = 6.9e-46
Identity = 102/326 (31.29%), Postives = 168/326 (51.53%), Query Frame = 1


Query: 20  ILKYLEEGRLRKAVSVLFD--SPFPFPHPFVLGS----CGSVLALHLSRQVHGHIVKSGF 79
           I ++ + G   +AV +       F  P+ F L S    C       L  Q+HG +VK GF
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF 379

Query: 80  VGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVDDGKMAVSMFFQ 139
             ++ + ++L+DVY KC  M+ A  +F E+ ++N+VSWN ++  Y  + +G  A SMF +
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439

Query: 140 MFREAVMPLSFTFSNALIACSSMAAL------------------IEVSGALVDMYCKCRQ 199
             R  V     TFS+AL AC+S+A++                  + VS +L+DMY KC  
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499

Query: 200 LEYALKVFENAASRDVVLWNSIILGCCHNGRGMIVIELFQMMMMEKGISPDHVTFQGILL 259
           +++A  VF    + DV  WN++I G   +G G   + +   +M ++   P+ +TF G+L 
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILD-IMKDRDCKPNGLTFLGVLS 559

Query: 260 ACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFINNMPFDPTV 319
            C    L++ G++ F+SM     I P LEHY CM+ L GR G +D+  K I  +P++P+V
Sbjct: 560 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 619

Query: 320 SMLEKVLDACRKHGHSSEIMKATKSI 322
            +   +L A     +     ++ + I
Sbjct: 620 MIWRAMLSASMNQNNEEFARRSAEEI 644

[Close]

BLAST of Cp4.1LG13g04380 vs. TAIR10
Match: AT5G09950.1 (AT5G09950.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-45
Identity = 100/289 (34.60%), Postives = 156/289 (53.98%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRN 107
           VL +  S+    L +Q+HG  +K+        E++L+  YGKC  M+    +F  +  R 
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582

Query: 108 D-VSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           D V+WN ++  Y+  +    A+ + + M +      SF ++  L A +S+A L       
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      + V  ALVDMY KC +L+YAL+ F     R+   WNS+I G   +G+G 
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
             ++LF+ M ++    PDHVTF G+L AC +  L+E G ++F+SMSD + + PR+EH+ C
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDA-CRKHGHSSEIMK 317
           M ++ GR G +D+LE FI  MP  P V +   VL A CR +G  +E+ K
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811

[Close]

BLAST of Cp4.1LG13g04380 vs. NCBI nr
Match: gi|659081931|ref|XP_008441583.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 164/284 (57.75%), Postives = 209/284 (73.59%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           +L  C  +  +   +QVHG + ++GF  N+ + ++L+D+YGKC  +  A+  F ++ Q R
Sbjct: 399 ILNVCTGISDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWR 458

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + VSWN ++  Y      + A++ F +M  E   P SFTF+  L AC++M AL       
Sbjct: 459 DKVSWNALLTAYARHGMSEQAMTSFSEMQLETD-PNSFTFATLLGACANMFALEQGKQIH 518

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      I ++GALVDMYCKCR+LEYALKVFE+ ASRDVVLWNSIILGCCHN R M
Sbjct: 519 GFMVRNNYAIDIVLTGALVDMYCKCRELEYALKVFEHVASRDVVLWNSIILGCCHNRRDM 578

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
           + IELFQ M ME+GI PDHVTFQG+LLAC++ENL+ELGR+YFDSMS+KFCIIPRLEHYEC
Sbjct: 579 LAIELFQSMTMEEGIKPDHVTFQGVLLACLHENLIELGRKYFDSMSEKFCIIPRLEHYEC 638

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHSS 313
           M+ELYG+HGNMDELEKFINNMPFDPTV MLE++ +ACR+HGHSS
Sbjct: 639 MVELYGQHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHSS 681

[Close]

BLAST of Cp4.1LG13g04380 vs. NCBI nr
Match: gi|449453101|ref|XP_004144297.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 160/283 (56.54%), Postives = 209/283 (73.85%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           +L  C     +   +QVHG + ++GF  N+ + ++L+D+YGKC  +  A+  F ++ Q R
Sbjct: 399 ILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWR 458

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + VSWN ++  +      + A+++F +M  E   P +FTF+  L AC++M AL       
Sbjct: 459 DKVSWNALLTAHARHGMSEQAMTIFSEMQLETD-PNNFTFATLLGACANMFALEHGKQIH 518

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      I ++GALVDMYCKCR+L+YALKVFE+ ASRDVVLWNSIILGCCHN R M
Sbjct: 519 GFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDM 578

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
           + I+LFQ+M ME+GI PDHVTFQGILLAC++ENLVELGR+YFDSMS+KFC+IPRLEHYEC
Sbjct: 579 LAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYEC 638

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHS 312
           M+ELYG+HGNMDELEKFINNMPFDPTV MLE++ +ACR+HGHS
Sbjct: 639 MVELYGQHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHS 680

[Close]

BLAST of Cp4.1LG13g04380 vs. NCBI nr
Match: gi|590599782|ref|XP_007019278.1| (Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 283.1 bits (723), Expect = 1.1e-72
Identity = 141/281 (50.18%), Postives = 189/281 (67.26%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           VL  C  +  + + +QVHG I + GF  N+ + ++L+D+YGKC  +N AR  F ++ Q R
Sbjct: 420 VLNVCAGISDVEMGKQVHGFIYRHGFCSNIFVGNALLDMYGKCGTLNSARVWFYQMSQER 479

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + VSWN ++  Y      + A++ F +M  E+  P  FTF   L AC++M AL       
Sbjct: 480 DTVSWNALLTSYARHHRSEQAMTFFNEMQWES-RPCKFTFGTLLAACANMFALNHGKQIH 539

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      + + GALVDMYCKCR + YAL +F+ AA RDVVLWN++I GCCHNGRG 
Sbjct: 540 GFMIRNGYELDMVIRGALVDMYCKCRCVLYALAIFKEAALRDVVLWNTMIFGCCHNGRGR 599

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
            V+EL  +M  E+G+ PDHVTFQGILLAC+ E+  ELG+QYF+SMS+ +CIIPRLEHY+C
Sbjct: 600 EVLELVGLME-EEGVKPDHVTFQGILLACICEHEAELGKQYFNSMSNDYCIIPRLEHYDC 659

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHG 310
           MIE+Y R G M ELEKFI ++PF+PTV+ML +V DAC KHG
Sbjct: 660 MIEIYSRCGCMKELEKFIKSLPFEPTVAMLTRVFDACEKHG 698

[Close]

BLAST of Cp4.1LG13g04380 vs. NCBI nr
Match: gi|720045900|ref|XP_010270348.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Nelumbo nucifera])

HSP 1 Score: 278.1 bits (710), Expect = 3.4e-71
Identity = 138/282 (48.94%), Postives = 191/282 (67.73%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRN 107
           +L  C  +  + L +QVHG + + GF  N+++ ++L+D+YGKC+ ++ +R  F E+ +  
Sbjct: 401 ILNICAGLSDVELGKQVHGFVYRHGFFSNLLVGNALLDMYGKCKHLDSSRIWFSEMCHLR 460

Query: 108 D-VSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           D VSWN ++  Y++ +  + A+ MF+ M  E   P  FTF   L AC+++ AL       
Sbjct: 461 DRVSWNALLTSYVQHELSEEAMRMFWDMQWETT-PNKFTFGTLLAACANIFALDQGKQIH 520

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      I V GALVDMY KCR  EYA+KVF+  A RD++LWNS+ILGC HNGRG 
Sbjct: 521 GYMIRKGCEIDIVVRGALVDMYSKCRCHEYAVKVFKEEAPRDLILWNSMILGCAHNGRGG 580

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
             ++LF  M  E+G+  DHVTFQGILLAC+ E  V+LG+QYF+SMS+K+CIIPRLEHYEC
Sbjct: 581 EALDLFHSM--EEGVRADHVTFQGILLACIGEGYVDLGKQYFNSMSNKYCIIPRLEHYEC 640

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGH 311
           MIEL+GR+G +D+LE F+ +MPF+PT  ML KV DACR+H H
Sbjct: 641 MIELFGRYGYIDDLENFVQSMPFEPTEQMLIKVFDACREHKH 679

[Close]

BLAST of Cp4.1LG13g04380 vs. NCBI nr
Match: gi|802725249|ref|XP_012086006.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Jatropha curcas])

HSP 1 Score: 274.6 bits (701), Expect = 3.8e-70
Identity = 136/283 (48.06%), Postives = 188/283 (66.43%), Query Frame = 1


Query: 48  VLGSCGSVLALHLSRQVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNR 107
           +L  C  +  + + + VHG I + GF  N+++ ++L+D+YGKC     AR  F ++ Q+R
Sbjct: 398 LLNVCAGLSDVEIGKHVHGFIYRHGFSSNLLVGNALLDMYGKCGNFRSARVWFYQMSQSR 457

Query: 108 NDVSWNVIVRRYLEVDDGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAAL------- 167
           + +SWN ++  Y      + A+ MF +M  E   P SFTF   L AC+++ AL       
Sbjct: 458 DSISWNALLTSYARHHQSEQAMVMFGEMQWE-TKPDSFTFGTLLAACANIFALDQGKQIH 517

Query: 168 -----------IEVSGALVDMYCKCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGM 227
                      I +SGALV+MYCKCR + YAL+VF + +SRD+VLWNSIILGCCHNGRG 
Sbjct: 518 GFVIRNNYEIDIVMSGALVNMYCKCRYIAYALRVFRDTSSRDLVLWNSIILGCCHNGRGK 577

Query: 228 IVIELFQMMMMEKGISPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYEC 287
            V++LF+ +M E+G+ PDH T QG+LLAC++E  VEL  QYFDSM  ++CIIPRLEHYEC
Sbjct: 578 EVLKLFR-VMQEEGVKPDHATIQGLLLACMFEGHVELASQYFDSMGKEYCIIPRLEHYEC 637

Query: 288 MIELYGRHGNMDELEKFINNMPFDPTVSMLEKVLDACRKHGHS 312
           MIE++ R+  M+ELE F+  MPFDPT  ML +V DAC++HG S
Sbjct: 638 MIEIFSRYRCMNELEDFVKGMPFDPTAPMLMRVFDACKEHGCS 678

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP256_ARATH	9.3e-61	42.35	Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN...	[more]
PPR85_ARATH	3.8e-46	34.23	Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
PP108_ARATH	1.4e-45	32.52	Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th...	[more]
PP377_ARATH	1.2e-44	31.29	Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS...	[more]
PP373_ARATH	3.5e-44	34.60	Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th...	[more]

BLAST of Cp4.1LG13g04380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFE0_CUCSA	1.5e-86	56.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344820 PE=4 SV=1	[more]
A0A061FHV8_THECC	7.4e-73	50.18	Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c...	[more]
A0A067JQM8_JATCU	2.6e-70	48.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22482 PE=4 SV=1	[more]
B9SVS3_RICCO	4.9e-69	47.70	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
F6GZT6_VITVI	1.4e-68	48.06	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14940 PE=4 SV=...	[more]

BLAST of Cp4.1LG13g04380 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26540.1	5.2e-62	42.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G59720.1	2.1e-47	34.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G68930.1	8.1e-47	32.52	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G13230.1	6.9e-46	31.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G09950.1	2.0e-45	34.60	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Cp4.1LG13g04380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081931\|ref\|XP_008441583.1\|	1.4e-88	57.75	PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Cucumis melo]	[more]
gi\|449453101\|ref\|XP_004144297.1\|	2.2e-86	56.54	PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Cucumis sativu...	[more]
gi\|590599782\|ref\|XP_007019278.1\|	1.1e-72	50.18	Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cac...	[more]
gi\|720045900\|ref\|XP_010270348.1\|	3.4e-71	48.94	PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Nelumbo nucife...	[more]
gi\|802725249\|ref\|XP_012086006.1\|	3.8e-70	48.06	PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Jatropha curca...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04380.1	Cp4.1LG13g04380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 266..289 score: 0.14coord: 109..136 score: 0.29coord: 165..184 score: 0.13coord: 81..107 score: 0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 190..237 score: 6.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 192..226 score: 2.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 359..393 score: 5.393coord: 438..471 score: 6.971coord: 262..296 score: 6.632coord: 190..225 score: 10.775coord: 512..546 score: 5.371coord: 226..260 score: 6.018coord: 159..189 score: 6.171coord: 107..141 score: 8.44coord: 76..106 score:
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 404..450 score: 1.5E-140coord: 48..322 score: 1.5E
None	No IPR available	PANTHER	PTHR24015:SF72	SUBFAMILY NOT NAMED	coord: 404..450 score: 1.5E-140coord: 48..322 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g04380	Cucsa.077210	Cucumber (Gy14) v1	cgycpeB0127
Cp4.1LG13g04380	CmaCh15G006370	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g04380	CmoCh15G006470	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g04380	CmoCh04G025240	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g04380	Cla013879	Watermelon (97103) v1	cpewmB170
Cp4.1LG13g04380	Csa6G344300	Cucumber (Chinese Long) v2	cpecuB200
Cp4.1LG13g04380	ClCG08G006260	Watermelon (Charleston Gray)	cpewcgB180
Cp4.1LG13g04380	CSPI06G18260	Wild cucumber (PI 183967)	cpecpiB201
Cp4.1LG13g04380	Lsi08G005080	Bottle gourd (USVL1VR-Ls)	cpelsiB158
Cp4.1LG13g04380	CsaV3_6G031160	Cucumber (Chinese Long) v3	cpecucB0240
Cp4.1LG13g04380	Bhi04G001438	Wax gourd	cpewgoB0252
Cp4.1LG13g04380	CsGy6G017740	Cucumber (Gy14) v2	cgybcpeB743
Cp4.1LG13g04380	Carg01568	Silver-seed gourd	carcpeB1157
Cp4.1LG13g04380	Carg15758	Silver-seed gourd	carcpeB0095

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g04380	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG13g04380	Cucurbita pepo (Zucchini)	cpecpeB228
Cp4.1LG13g04380	Cucurbita maxima (Rimu)	cmacpeB033
Cp4.1LG13g04380	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g04380	Cucurbita moschata (Rifu)	cmocpeB009
Cp4.1LG13g04380	Melon (DHL92) v3.5.1	cpemeB168
Cp4.1LG13g04380	Melon (DHL92) v3.6.1	cpemedB200