BLAST of CmaCh04G024110 vs. Swiss-Prot
Match:
PPR73_ARATH (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E58 PE=3 SV=1)
HSP 1 Score: 582.0 bits (1499), Expect = 8.7e-165
Identity = 291/624 (46.63%), Postives = 414/624 (66.35%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M LL+ G S ++S L+++ L S S +AK +HAQLL+ G T+ GNRCLQL
Sbjct: 1 MFQLLRRAHGLCMPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQL 60
Query: 61 YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
Y G V ++F DI +KN ++WN+CLKGLF+ GY++ A +LFDEMPERD+VSWN M+
Sbjct: 61 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
SG VS GF + VF +MQ RP+E+TFSIL S+V+C HG+QIHG+ I SG+ N
Sbjct: 121 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
+V+ NS++DMY + G+ DY +F +ME DV+SWN LIL C SG + +AL+QF+LMR
Sbjct: 181 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
PD++TVS+++S+CS L+EL GKQ L C KMGF SNSIVL A ID+FSKCN L D
Sbjct: 241 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 300
Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
+ +LF E +WD LC++MI S +WH D++ LF+ A+ +++RP T SSVLSS++
Sbjct: 301 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
LD G+ +H+LV+KLGF+ DT V++SL++MY K G +D AM VF +DLI WNT+
Sbjct: 361 -VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 420
Query: 421 IMGLVNNGKYFEALGTLKN-LVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
IMGL N + E+L L+ + + DR+TL G+L+AC +AGFV+EG+ IFS+ME H
Sbjct: 421 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
GV P NEHY C+++LL R G EA +I +K+ +P+S W +L A GD + E V
Sbjct: 481 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 540
Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
A+ +++ EP+ S PY VL + Y RWE++V++R AM + + S + I+ V++
Sbjct: 541 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 600
Query: 601 FQDDRLQHLRGESLISALELIVWE 624
F+ D+LQ G + L+L+ W+
Sbjct: 601 FEADQLQIHGGHDTCALLDLLSWD 623
BLAST of CmaCh04G024110 vs. Swiss-Prot
Match:
PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 399.4 bits (1025), Expect = 8.0e-110
Identity = 230/663 (34.69%), Postives = 368/663 (55.51%), Query Frame = 1
Query: 17 SHYSYLIDQCLASS-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFG 76
S ++ L+D C+ S S + +HA ++K G +N F+ NR + Y+ G + + +VF
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 77 DIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
+ ++NI +WN + GL + G++D A +LF MPERD +WN M+SG +A+
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 137 FLEMQDAGFRPSEYTFSILLSVVS---CPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYG 196
F M GF +EY+F+ +LS S + G Q+H S+I +S+V +G++L+DMY
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199
Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSI 256
K G V+ +F M +V+SWNSLI ++G V AL+ F +M + PD+ T++
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259
Query: 257 MISLCSFLQELELGKQFLGFCFKMGFTSNSIVLS-AAIDLFSKCNSLRDAAQLFE----- 316
+IS C+ L +++G++ G K N I+LS A +D+++KC+ +++A +F+
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319
Query: 317 ----ETN----------------------QWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
ET+ + + +A+I+ +G +++ LF
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379
Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVSSSLVDMYA 436
RE++ PT + +++L + + L LG Q H VLK GF E D V +SL+DMY
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439
Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAG 496
K G ++ VF M RD +SWN MI+G NG EAL + +++ G D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499
Query: 497 VLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQ 556
VL AC HAGFV+EG + FS+M + GV P +HYTC+VDLL RAG EEA ++IE+M Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559
Query: 557 PTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVR 616
P S W SLL AC +H ++ + + VAE+++++EP S PY +L+ YA G+WE + VR
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619
Query: 617 KAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVEYGNEHEQLR 638
K+M G K CSW+ I+ H + F H R + + S L++++ E+ +H ++
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIG 679
BLAST of CmaCh04G024110 vs. Swiss-Prot
Match:
PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)
HSP 1 Score: 330.5 bits (846), Expect = 4.6e-89
Identity = 183/607 (30.15%), Postives = 313/607 (51.57%), Query Frame = 1
Query: 19 YSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIK 78
+ +I C +SS V + K +HAQ++KL +++ N + +Y
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV---------------- 230
Query: 79 EKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
RF + A +F +P +D++SW+ +++G GF +A+ E
Sbjct: 231 ---------------RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 290
Query: 139 MQDAG-FRPSEYTFSILLSVVSC---PSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKF 198
M G F P+EY F L S P +G QIHG I+S + N + G SL DMY +
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350
Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMI 258
G ++ +F +E+ D SWN +I G +G+ A++ F MR++G PD ++ ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410
Query: 259 SLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEE-TNQWDQ 318
+ L G Q + K GF ++ V ++ + +++ C+ L LFE+ N D
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470
Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
+ ++++ H + + LF L P IT+ ++L + L LGSQ+H
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530
Query: 379 VLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
LK G + + + L+DMYAK G + A ++F M +RD++SW+T+I+G +G EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590
Query: 439 LGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVD 498
L K + G+ + +T GVL AC H G V+EGL +++TM+ EHG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650
Query: 499 LLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLP 558
LL+RAG+ EA I++M +P W +LL AC G++++ ++ AE ++K++P S
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710
Query: 559 YSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESL 618
+ +L +A+ G WE+ +R +M+ +K+ SW+ I+D ++ F + + H + +
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 745
Query: 619 ISALELI 621
+ L I
Sbjct: 771 YTVLHNI 745
BLAST of CmaCh04G024110 vs. Swiss-Prot
Match:
PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 2.0e-84
Identity = 177/567 (31.22%), Postives = 303/567 (53.44%), Query Frame = 1
Query: 65 GPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCV 124
G VH F G + N+ LK +D A LF+E+PE+D V++N +++G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVVSCPSH--GKQIHGSMIRSGIDVSNV 184
G +++ +FL+M+ +G +PS++TFS +L +VV G+Q+H + +G +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286
Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRAT 244
+GN ++D Y K V ++F M ++D +S+N +I ++ +L+ F M+
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346
Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSI--VLSAAIDLFSKCNSLR 304
G F + M+S+ + L L++G+Q C + T++SI V ++ +D+++KC
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406
Query: 305 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
+A +F+ Q A+IS G + LF NLR T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466
Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
F L LG Q+H +++ G + S LVDMYAK G I +A++VF +MP R+ +SWN
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526
Query: 425 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 484
+I +NG A+G +++ G+ D +++ GVL AC H GFV++G F M +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586
Query: 485 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 544
G+ P +HY C++DLL R G+F EA ++++M +P W S+L+AC IH + ++ ER
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646
Query: 545 AERVMKLEP-QLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVY 604
AE++ +E + + Y ++ YAA G WE V+KAM G +KV A SWV + ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706
Query: 605 AFQDDRLQHLRGESLISALELIVWEVE 626
F + H G+ ++ + + E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730
BLAST of CmaCh04G024110 vs. Swiss-Prot
Match:
PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 6.4e-83
Identity = 195/599 (32.55%), Postives = 314/599 (52.42%), Query Frame = 1
Query: 16 FSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFG 75
F + L+ + +A + K++HA +K + ++T+L N + LY+ G + F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 76 DIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 135
+E N+ S+N+ +K + + AR LFDE+P+ D VS+N ++SG + AM +
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 136 FLEMQDAGFRPSEYTFSILLSVVSCPSHG--KQIHGSMIRSGIDVSNVVLGNSLIDMYGK 195
F M+ GF +T S L++ C KQ+H + G D + V N+ + Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSV-NNAFVTYYSK 187
Query: 196 FGLVDYMFVMFYSMEKV-DVISWNSLIL--GCHRSGFRVLALNQFFLMRATGHSPDQFTV 255
GL+ +FY M+++ D +SWNS+I+ G H+ G + LAL + + + G D FT+
Sbjct: 188 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK--GFKIDMFTL 247
Query: 256 SIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKC---NSLRDAAQLFEE 315
+ +++ + L L G+QF G K GF NS V S ID +SKC + + D+ ++F+E
Sbjct: 248 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 307
Query: 316 TNQWDQALCDAMISSLAWHGHW-RDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDL 375
D + + MIS + + +++ F R RP + V S+ S +
Sbjct: 308 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 367
Query: 376 GSQIHNLVLKLGFESDTV-VSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLV 435
QIH L +K S+ + V+++L+ +Y K G + +A VF MP + +S+N MI G
Sbjct: 368 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 427
Query: 436 NNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTN 495
+G EAL + ++ G+ ++IT VL AC H G VDEG F+TM+ + P
Sbjct: 428 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 487
Query: 496 EHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMK 555
EHY+C++DLL RAGK EEA I+ M +P S W +LL AC H ++ + ER A +M
Sbjct: 488 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 547
Query: 556 LEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVI--KDHVYAFQD 603
++P + PY +LA YA +WE VRK+M +K CSW+ + K HV+ +D
Sbjct: 548 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
BLAST of CmaCh04G024110 vs. TrEMBL
Match:
M5W3X4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1)
HSP 1 Score: 731.5 bits (1887), Expect = 9.9e-208
Identity = 352/601 (58.57%), Postives = 457/601 (76.04%), Query Frame = 1
Query: 26 CLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFG-PVHEFFRVFGDIKEKNIVS 85
CL+ S++ AK IHAQL+K+G N++TFLGNRCL +Y FG V++ +VF +I +KNIVS
Sbjct: 22 CLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIVS 81
Query: 86 WNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGF 145
WNICLKG RFG + A N+F EMP RD+VSWN M+SGCVS GF + A +F +MQ AG
Sbjct: 82 WNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQIAGM 141
Query: 146 RPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLVDYMFVMF 205
RPSEYTFSI++S+V+C HGKQIHG MIR+G+++SN++LGNSLIDMYGK G VDY F +F
Sbjct: 142 RPSEYTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVF 201
Query: 206 YSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELE 265
++ME+VD+ISWNSLI GCHRSG+ LAL+QFF MR+T HSPD+FT+S +I++C L LE
Sbjct: 202 FTMEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNLE 261
Query: 266 LGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCDAMISSLA 325
GKQ FC K+GF SNSI+ SAAIDLFSKCN L DA +LFEE + WD A+C++MISS A
Sbjct: 262 KGKQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYA 321
Query: 326 WHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTV 385
H D++ LFV LRENLRPT TLSS+L+S S+F P +LGSQIH+LV+KLGFESD +
Sbjct: 322 RHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAELGSQIHSLVVKLGFESDPI 381
Query: 386 VSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEG 445
V+SSL+D Y+KVGLI+ AMK+F ++ +DL SWNTMI+G+ +NGK FE L + L+ EG
Sbjct: 382 VASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISEG 441
Query: 446 VVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEA 505
+ D++TLAGVLLAC G VDEG+ +F +ME E+G+VP +EHY +VDLLS GK +EA
Sbjct: 442 IAPDKLTLAGVLLACNLGGLVDEGMTMFLSMEKEYGIVPQDEHYMSIVDLLSSTGKLKEA 501
Query: 506 VNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAAR 565
++I+ +M + +S W +L AC IHGD + E VA R+M+ E Q SLPY VLARAY R
Sbjct: 502 IDIVAEMPYEASSMIWELILRACVIHGDFKLTETVAHRMMQSEAQSSLPYLVLARAYEMR 561
Query: 566 GRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEV 625
GRWEST+RVRKAM+ G + V CS + I++HVY F+ D+LQ RG+ + L L+ WE+
Sbjct: 562 GRWESTIRVRKAMKLKGVRNVIGCSKIGIQNHVYTFKADQLQPHRGKDIYLILRLLCWEM 621
BLAST of CmaCh04G024110 vs. TrEMBL
Match:
B9H7L3_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0005s20740g PE=4 SV=1)
HSP 1 Score: 705.7 bits (1820), Expect = 5.8e-200
Identity = 344/625 (55.04%), Postives = 454/625 (72.64%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M+ L+K R S S+YSYLID C + S+ A+ HAQL+K+GLN +TFLGNRCL L
Sbjct: 1 MYPLIKQCHRVSRTSLSYYSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDL 60
Query: 61 YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
Y+ FG V++ +VF DI KNIVSWNICLKGL +F + A ++FD+MPERD+VSWN M+
Sbjct: 61 YSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
SG S G+ + A++ F EMQ G RPSE+T+SIL+SVV HGK+IHGS++RSG+ N
Sbjct: 121 SGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVVFGVRHGKEIHGSIVRSGLGALN 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
VVLGNSLIDMYGKF +DY +F +ME++DVISWNSLI C +SG+ LAL++F +MR+
Sbjct: 181 VVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRS 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
G+SPD+F+VS++I+ C L+ LE GKQ C K+GF N+I+ SA IDLFSKCN L D
Sbjct: 241 LGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLED 300
Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
+ +LFEE +QWD A+C++MISS A G D + LFV L++++RPT TLSSVL S S+
Sbjct: 301 SVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSI 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
L+ G+Q H+L +K G E D +V+SSLV+MY+K G ID ++K+F M +RDLI+WNTM
Sbjct: 361 L-KLEQGTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTM 420
Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
IMGL +NG+ FEAL T K L++ G+ DRITLAGVLLAC GF+ EG+ +FS+ME +G
Sbjct: 421 IMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
V P+NEHY C VDLL +AG+ +EA+ + E M +P S W S+L AC IHGDL + ERVA
Sbjct: 481 VKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVA 540
Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
ER+M+LEPQ SLPY VLAR + RG+WE VRV+KAM+ +KV CSW+ +K+ VY F
Sbjct: 541 ERLMELEPQSSLPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKVIGCSWIGVKNQVYTF 600
Query: 601 QDDRLQHLRGESLISALELIVWEVE 626
D+LQH RG+ + L L+ WE E
Sbjct: 601 TADQLQHHRGKEIYLVLRLLNWETE 624
BLAST of CmaCh04G024110 vs. TrEMBL
Match:
A5C139_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1)
HSP 1 Score: 705.7 bits (1820), Expect = 5.8e-200
Identity = 345/584 (59.08%), Postives = 441/584 (75.51%), Query Frame = 1
Query: 42 LLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGA 101
L+K+G N +TFLGNRCL LY+ G ++ RVF DI +KN++SWNI LK RFG ++ A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 102 RNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCP 161
R++FDEMP+RD+VSWN M+SG VS G + A F EMQ AG RPS +T+S LLS VS
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855
Query: 162 SHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILG 221
GKQIH SMIR+G+D+SNVV+GNSLI MYGKFG+VDY F +F +ME++D+ISWNSLI
Sbjct: 856 CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWS 915
Query: 222 CHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSN 281
C +SG++ LAL QF LMR+ G+SPDQFTVS +I++CS LQ+LE G+Q C ++GF SN
Sbjct: 916 CGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSN 975
Query: 282 SIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALR 341
SIV SA+IDLFSKCN L D+ ++FEE QWD LC+AMISS AWHG +++ LFV LR
Sbjct: 976 SIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLR 1035
Query: 342 ENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDN 401
ENLRPT TLS VLS++S+ P+D GSQIH+LV+K G ESD +V+SSLV+MYAK GLID+
Sbjct: 1036 ENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDS 1095
Query: 402 AMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRH 461
AMK F + +RDLISWNTMIMGL NG+ +AL K L+ G D ITLAGVLLAC
Sbjct: 1096 AMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNV 1155
Query: 462 AGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWI 521
G VDEGL+IFS+ME E+GV+P EHY C+VD++SR GK +EA++I+E M +P+ W
Sbjct: 1156 GGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG 1215
Query: 522 SLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIG 581
SLL AC I+GDL ERVAERVM+LEPQ SLPY VLA+AY RGRWES VRV +AM+ G
Sbjct: 1216 SLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKG 1275
Query: 582 AQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVE 626
+KV CSW+ IK+HV+ F++++L H+ G+ + L L++ E+E
Sbjct: 1276 VRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIE 1319
BLAST of CmaCh04G024110 vs. TrEMBL
Match:
A0A072V224_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV=1)
HSP 1 Score: 696.8 bits (1797), Expect = 2.7e-197
Identity = 345/625 (55.20%), Postives = 451/625 (72.16%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M+ K+ + H ++ SH S L+D CL+ S + +HA LKLGLN+ T+LGNRC+ L
Sbjct: 1 MYPFFKHTQYLH-STLSHCSTLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDL 60
Query: 61 YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
Y FG +++ +VF DI KN SWNICLKGLF+ G V A +FDEMP RD+VSWN M+
Sbjct: 61 YTEFGNINDALKVFDDISYKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
SG S GF++ A+ VF+EMQ AG RPS +TFSIL S+VS K++HG MIRSG+++SN
Sbjct: 121 SGYASCGFSSHALGVFVEMQGAGVRPSGFTFSILTSLVSSSCRAKEVHGMMIRSGMELSN 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
VV+GNSLI MYGKF LVDY F + SM+++D ISWNSLI CHR+G + LAL QF M+A
Sbjct: 181 VVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKA 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
PD+FT S ++S+CS L++LE GKQ FCFK+GF NSIV SAAIDLFSKCN L D
Sbjct: 241 AELLPDEFTCSTLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 300
Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
A +LFEE QWD ALC++MIS A H D++ LF+ LR+N+RPT T+S +LSS+S+
Sbjct: 301 AVRLFEEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSI 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
F P+++G+QIH LV K GFESD+VV++SLVDMYAK G IDNA+ +F ++ ++DL+SWNT+
Sbjct: 361 FLPVEVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTI 420
Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
+MGL NGK + + L +EG+ DRITLA VLLAC + VDEG+ IFS ME E G
Sbjct: 421 MMGLSYNGKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
V P EHY+ VV++L RAG +EAV+I+EKM + T+ W S+L ACA+ GDL IE VA
Sbjct: 481 VKPEEEHYSYVVEMLCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVA 540
Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
++M+ PQ+SLPY VLA+ Y GRWES VRVRKAMEN G+++ CSWV IK+HVY F
Sbjct: 541 TKIMERAPQISLPYLVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWVGIKNHVYTF 600
Query: 601 QDDRLQHLRGESLISALELIVWEVE 626
+ ++LQH G+ + L L+VWE+E
Sbjct: 601 ESNQLQHYGGKDIYLLLNLLVWEME 624
BLAST of CmaCh04G024110 vs. TrEMBL
Match:
A0A0B2SRT0_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_018329 PE=4 SV=1)
HSP 1 Score: 684.1 bits (1764), Expect = 1.8e-193
Identity = 337/626 (53.83%), Postives = 452/626 (72.20%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
M+ LLK +G + S S S L++ CL+ S++ K +HA LKLGLN T+LGNRCL L
Sbjct: 188 MYPLLKQAQGPY-PSLSCCSLLLNHCLSQKSLNFVKIVHAHFLKLGLNTYTYLGNRCLDL 247
Query: 61 YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
Y+ FG +++ +VF DI KN SWNICLKGL + G A ++FD MP RD+VSWN M+
Sbjct: 248 YSEFGHINDALKVFDDISHKNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSWNSMI 307
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
SG S G+ + A+++F+EMQ G RPS +TFSIL+S+VS H KQIH MIRSG+D+ N
Sbjct: 308 SGYASCGYLSHALELFVEMQGTGVRPSGFTFSILMSLVSSSPHAKQIHCRMIRSGVDLDN 367
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
VVLGNSLI++YGK GLV+Y F + M++ DVISWNSLI CH +G LAL QF+ MR
Sbjct: 368 VVLGNSLINIYGKLGLVEYAFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFYRMRG 427
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
PDQFT S+++S+CS L++L+ GKQ FCFKMGF NSIV SAAIDLFSKCN L D
Sbjct: 428 AELLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLED 487
Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
+ +LF++ +QWD LC++MISS A H +++ LFV LR+N+RPT +SS+LSS+S+
Sbjct: 488 SVRLFKKQDQWDSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSI 547
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
F P+++G+QIH+LV KLGFESD VV++SLVDMYAK G I +A+ +F +M +DL+SWNT+
Sbjct: 548 FLPVEVGNQIHSLVPKLGFESDAVVANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTI 607
Query: 421 IMGLVNNGKYFEALGTLKNLV-KEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
+MGL G+ + + L+ +EG++ DRITL VLLAC + VDEG+ IFS+ME E
Sbjct: 608 MMGLTYYGRVSLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVDEGIKIFSSMEMEF 667
Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
GV P EHY CVV++LS+AGK +EA++IIE M C+ TS W S+L ACAI+GDL +IE V
Sbjct: 668 GVKPGEEHYACVVEMLSKAGKLKEAIDIIETMPCRTTSDIWRSILSACAIYGDLQIIEGV 727
Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
A+++M E Q SLPY VLA+AY RGRW+S VR+RKA+EN G ++ SW+ I+++VY
Sbjct: 728 AKKIMDRESQTSLPYLVLAQAYQMRGRWDSMVRMRKAVENRGTKEFIGHSWIGIRNNVYT 787
Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
F ++LQH G+ L L L+VWE+E
Sbjct: 788 FASNQLQHYGGKDLYLVLNLLVWEME 812
BLAST of CmaCh04G024110 vs. TAIR10
Match:
AT1G43980.1 (AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 578.9 bits (1491), Expect = 4.2e-165
Identity = 286/607 (47.12%), Postives = 408/607 (67.22%), Query Frame = 1
Query: 18 HYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDI 77
++S L+++ L S S +AK +HAQLL+ G T+ GNRCLQLY G V ++F DI
Sbjct: 6 YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65
Query: 78 KEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFL 137
+KN ++WN+CLKGLF+ GY++ A +LFDEMPERD+VSWN M+SG VS GF + VF
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 138 EMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLV 197
+MQ RP+E+TFSIL S+V+C HG+QIHG+ I SG+ N+V+ NS++DMY + G+
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 198 DYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLC 257
DY +F +ME DV+SWN LIL C SG + +AL+QF+LMR PD++TVS+++S+C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 258 SFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCD 317
S L+EL GKQ L C KMGF SNSIVL A ID+FSKCN L D+ +LF E +WD LC+
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 318 AMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKL 377
+MI S +WH D++ LF+ A+ +++RP T SSVLSS++ LD G+ +H+LV+KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 365
Query: 378 GFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTL 437
GF+ DT V++SL++MY K G +D AM VF +DLI WNT+IMGL N + E+L
Sbjct: 366 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 425
Query: 438 KN-LVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLS 497
L+ + + DR+TL G+L+AC +AGFV+EG+ IFS+ME HGV P NEHY C+++LL
Sbjct: 426 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 485
Query: 498 RAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSV 557
R G EA +I +K+ +P+S W +L A GD + E VA+ +++ EP+ S PY V
Sbjct: 486 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 545
Query: 558 LARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISA 617
L + Y RWE++V++R AM + + S + I+ V++F+ D+LQ G +
Sbjct: 546 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCAL 605
Query: 618 LELIVWE 624
L+L+ W+
Sbjct: 606 LDLLSWD 611
BLAST of CmaCh04G024110 vs. TAIR10
Match:
AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 399.4 bits (1025), Expect = 4.5e-111
Identity = 230/663 (34.69%), Postives = 368/663 (55.51%), Query Frame = 1
Query: 17 SHYSYLIDQCLASS-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFG 76
S ++ L+D C+ S S + +HA ++K G +N F+ NR + Y+ G + + +VF
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 77 DIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
+ ++NI +WN + GL + G++D A +LF MPERD +WN M+SG +A+
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 137 FLEMQDAGFRPSEYTFSILLSVVS---CPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYG 196
F M GF +EY+F+ +LS S + G Q+H S+I +S+V +G++L+DMY
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199
Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSI 256
K G V+ +F M +V+SWNSLI ++G V AL+ F +M + PD+ T++
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259
Query: 257 MISLCSFLQELELGKQFLGFCFKMGFTSNSIVLS-AAIDLFSKCNSLRDAAQLFE----- 316
+IS C+ L +++G++ G K N I+LS A +D+++KC+ +++A +F+
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319
Query: 317 ----ETN----------------------QWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
ET+ + + +A+I+ +G +++ LF
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379
Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVSSSLVDMYA 436
RE++ PT + +++L + + L LG Q H VLK GF E D V +SL+DMY
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439
Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAG 496
K G ++ VF M RD +SWN MI+G NG EAL + +++ G D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499
Query: 497 VLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQ 556
VL AC HAGFV+EG + FS+M + GV P +HYTC+VDLL RAG EEA ++IE+M Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559
Query: 557 PTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVR 616
P S W SLL AC +H ++ + + VAE+++++EP S PY +L+ YA G+WE + VR
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619
Query: 617 KAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVEYGNEHEQLR 638
K+M G K CSW+ I+ H + F H R + + S L++++ E+ +H ++
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIG 679
BLAST of CmaCh04G024110 vs. TAIR10
Match:
AT3G53360.1 (AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 330.5 bits (846), Expect = 2.6e-90
Identity = 183/607 (30.15%), Postives = 313/607 (51.57%), Query Frame = 1
Query: 19 YSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIK 78
+ +I C +SS V + K +HAQ++KL +++ N + +Y
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV---------------- 230
Query: 79 EKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
RF + A +F +P +D++SW+ +++G GF +A+ E
Sbjct: 231 ---------------RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 290
Query: 139 MQDAG-FRPSEYTFSILLSVVSC---PSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKF 198
M G F P+EY F L S P +G QIHG I+S + N + G SL DMY +
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350
Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMI 258
G ++ +F +E+ D SWN +I G +G+ A++ F MR++G PD ++ ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410
Query: 259 SLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEE-TNQWDQ 318
+ L G Q + K GF ++ V ++ + +++ C+ L LFE+ N D
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470
Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
+ ++++ H + + LF L P IT+ ++L + L LGSQ+H
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530
Query: 379 VLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
LK G + + + L+DMYAK G + A ++F M +RD++SW+T+I+G +G EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590
Query: 439 LGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVD 498
L K + G+ + +T GVL AC H G V+EGL +++TM+ EHG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650
Query: 499 LLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLP 558
LL+RAG+ EA I++M +P W +LL AC G++++ ++ AE ++K++P S
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710
Query: 559 YSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESL 618
+ +L +A+ G WE+ +R +M+ +K+ SW+ I+D ++ F + + H + +
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 745
Query: 619 ISALELI 621
+ L I
Sbjct: 771 YTVLHNI 745
BLAST of CmaCh04G024110 vs. TAIR10
Match:
AT3G02010.1 (AT3G02010.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 315.1 bits (806), Expect = 1.1e-85
Identity = 177/567 (31.22%), Postives = 303/567 (53.44%), Query Frame = 1
Query: 65 GPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCV 124
G VH F G + N+ LK +D A LF+E+PE+D V++N +++G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVVSCPSH--GKQIHGSMIRSGIDVSNV 184
G +++ +FL+M+ +G +PS++TFS +L +VV G+Q+H + +G +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286
Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRAT 244
+GN ++D Y K V ++F M ++D +S+N +I ++ +L+ F M+
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346
Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSI--VLSAAIDLFSKCNSLR 304
G F + M+S+ + L L++G+Q C + T++SI V ++ +D+++KC
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406
Query: 305 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
+A +F+ Q A+IS G + LF NLR T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466
Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
F L LG Q+H +++ G + S LVDMYAK G I +A++VF +MP R+ +SWN
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526
Query: 425 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 484
+I +NG A+G +++ G+ D +++ GVL AC H GFV++G F M +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586
Query: 485 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 544
G+ P +HY C++DLL R G+F EA ++++M +P W S+L+AC IH + ++ ER
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646
Query: 545 AERVMKLEP-QLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVY 604
AE++ +E + + Y ++ YAA G WE V+KAM G +KV A SWV + ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706
Query: 605 AFQDDRLQHLRGESLISALELIVWEVE 626
F + H G+ ++ + + E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730
BLAST of CmaCh04G024110 vs. TAIR10
Match:
AT1G56570.1 (AT1G56570.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 309.3 bits (791), Expect = 6.1e-84
Identity = 174/554 (31.41%), Postives = 307/554 (55.42%), Query Frame = 1
Query: 78 KEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFL 137
K+ +I++ N+ + F G V+ AR+LFDEMP+RD+V+W M++G SS + +A + F
Sbjct: 42 KKHHILATNLIVS-YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 101
Query: 138 EMQDAGFRPSEYTFSILLSVVSCPS-----HGKQIHGSMIRSGIDVSNVVLGNSLIDMYG 197
EM G P+E+T S +L SC + +G +HG +++ G++ S + + N++++MY
Sbjct: 102 EMVKQGTSPNEFTLSSVLK--SCRNMKVLAYGALVHGVVVKLGMEGS-LYVDNAMMNMYA 161
Query: 198 KFGL-VDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVS 257
+ ++ ++F ++ + ++W +LI G G + L + M + ++
Sbjct: 162 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 221
Query: 258 IMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQW 317
I + + + + GKQ K GF SN V+++ +DL+ +C L +A F E
Sbjct: 222 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 281
Query: 318 DQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIH 377
D + +IS L +++ +F + P T +S++++ + L+ G Q+H
Sbjct: 282 DLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 341
Query: 378 NLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSR-DLISWNTMIMGLVNNGKY 437
+ + GF + ++++L+DMYAK G I ++ +VF ++ R +L+SW +M++G ++G
Sbjct: 342 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 401
Query: 438 FEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTC 497
EA+ +V G+ DRI VL ACRHAG V++GL F+ ME+E+G+ P + Y C
Sbjct: 402 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNC 461
Query: 498 VVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAER-VMKLEPQ 557
VVDLL RAGK EA ++E+M +P + W ++L AC H +I R+A R VM+L+P+
Sbjct: 462 VVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK 521
Query: 558 LSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLR 617
+ Y +L+ YAA G+W RVRK M +G +K SW+++++ V++F
Sbjct: 522 MVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPN 581
Query: 618 GESLISALELIVWE 624
S+ S L L++ E
Sbjct: 582 ASSVYSVLGLLIEE 590
BLAST of CmaCh04G024110 vs. NCBI nr
Match:
gi|449453105|ref|XP_004144299.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis sativus])
HSP 1 Score: 986.9 bits (2550), Expect = 1.9e-284
Identity = 487/632 (77.06%), Postives = 540/632 (85.44%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH L L GAH+A SHYS LI +CL SVH AKTIH QLLKLGL++NTFL NRCLQL
Sbjct: 1 MHLQLNKLLGAHKALLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQL 60
Query: 61 YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
YALFGPVH+ +VF IK+KNI+SWNICLKG+FRFG VDGAR+LFD MPERDIVSWN M+
Sbjct: 61 YALFGPVHDVLKVFDGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
SG VSSGF N AM V LEMQ+AGFRPSEYTFSILLS+VS HGKQ+HGSMIRSG+DVS+
Sbjct: 121 SGYVSSGFGNSAMGVSLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
+VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
T HSPDQFT+S++IS+C LQELELGKQ FCFKMGFTSNSIVLSA IDLFSKC+SL+
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKV 300
Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
A QLFE+TNQWD LC+ MISS AWHGHWRDSMWLFVY LRENL P TLSSVLSSISV
Sbjct: 301 AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISV 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
FTP++LGSQIHNLVLKLGF+SD +V+SSLVDMYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
IMGLV+NGKYFEAL T LV EGV+ DRITLAGVLLAC +AG V+EGL IFS M EHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
VVP NEHY+CVV+LLSRAGKFEEAVNII+ QPTSTFW SLL CAIHGDL +IE+VA
Sbjct: 481 VVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540
Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
E +MKLEPQ SLPYSVLA+AYA R +WES VRV+K ENI QKVKACSW+V KD+ YAF
Sbjct: 541 EWMMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAF 600
Query: 601 QDDRLQHLRGESLISALELIVWEVEYGNEHEQ 633
QDD+LQ L E++IS LELI+WE+EYG +HEQ
Sbjct: 601 QDDQLQLLSRENIISVLELIIWEIEYGIDHEQ 632
BLAST of CmaCh04G024110 vs. NCBI nr
Match:
gi|659081917|ref|XP_008441575.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])
HSP 1 Score: 974.9 bits (2519), Expect = 7.4e-281
Identity = 482/632 (76.27%), Postives = 536/632 (84.81%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH L L GAH+A SHYS LI QCL SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1 MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
Query: 61 YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
Y LFGPVH+ + F IK+KNI+SWNICLKG+FRFG VD R+LFD MPERDIVSWN M+
Sbjct: 61 YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
SG VSSGFA AM + LEMQ+AGFRPSEYTFSILLS+VS HGKQ+HGSMIRSG+DVS+
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180
Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
+VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240
Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
T HSPDQFT+S++IS+C LQELELGKQ FC KMGFTSNSIVLSA IDLFSKC+SL+
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300
Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
A QLFE+TNQ D+ LC+ MISS AWHGHWRDSMWLFVY LRENL P TLSSVLSS+SV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
FTP++LGSQIHNLVLKLGFE D +V+SSLVDMYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
IMGLV+NGKYFEAL T LV EGV+ DRITLAGVLLAC +AGFV+EGL IFSTM EHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
VVP+NEHY+CVV+LLSRAGKFEEAVNII+ QPTSTFW SLL CAIHGDL +IE+VA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540
Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
E VMKLEPQ SLPYSVLA+AYA R +WES VRV+ ENI AQKVKACSW+V KD YAF
Sbjct: 541 EWVMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF 600
Query: 601 QDDRLQHLRGESLISALELIVWEVEYGNEHEQ 633
+DD+LQ L E+ IS LELI+WE+EYG ++EQ
Sbjct: 601 EDDQLQLLLRENFISVLELIIWEIEYGIDYEQ 632
BLAST of CmaCh04G024110 vs. NCBI nr
Match:
gi|694430780|ref|XP_009342851.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])
HSP 1 Score: 757.3 bits (1954), Expect = 2.4e-215
Identity = 370/626 (59.11%), Postives = 474/626 (75.72%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH K L G H+ S S+YS LID CL+ SV+I K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1 MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNIVKIIHAQLIKVGFNSHTFLGNRCLDV 60
Query: 61 YALFGP-VHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCM 120
Y FG +H+ +V+ +I EKN+VSWNICLKGL RFG + AR++F EMPERD+VSWN M
Sbjct: 61 YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLSRFGEIQKARHMFAEMPERDVVSWNSM 120
Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVS 180
+SG VS GF + A+++F +MQ AG RPSEYTFSI++++V+ +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180
Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 240
NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+ LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240
Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLR 300
AT ++PD+FT+S +I++C L +LE GKQ FCFK+GF SNSIV SAAIDL SKCN L
Sbjct: 241 ATEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300
Query: 301 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
DA +LFEE + WD A+C++MISS A HG D + LFV LRENLRPT TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDVVQLFVLTLRENLRPTEFTLSSMLSSVS 360
Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
+F P + GSQIH+LV+KLGFESD +V+SSLVD+Y+K GL++ AMK+F++M +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420
Query: 421 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
+IMGL +NGK FE L K LV +G D +TLAGVLLAC GF++EG+ IF T+E E+
Sbjct: 421 IIMGLAHNGKVFETLSIFKELVSKGTAPDNLTLAGVLLACNFGGFIEEGMTIFLTIEKEY 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
G+VP EHY +VDLL RAGK EA++++ M + S W S+L AC IHGD + ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540
Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
A+R+MKL PQ SLPY VLARAY RG+WES + VRKAM G + V CSW+ I++HVY
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600
Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
F ++LQ RG+ + L L+ E+E
Sbjct: 601 FNAEQLQPPRGKDIYLILRLLSSEME 626
BLAST of CmaCh04G024110 vs. NCBI nr
Match:
gi|645264661|ref|XP_008237784.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Prunus mume])
HSP 1 Score: 755.4 bits (1949), Expect = 9.2e-215
Identity = 364/626 (58.15%), Postives = 471/626 (75.24%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH K G H+ S S+YS+LID CL+ S++ AK IHAQL+K+G N++TFLGNRCL +
Sbjct: 1 MHSFSKQFHGLHKTSLSYYSHLIDHCLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDV 60
Query: 61 YALFG-PVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCM 120
Y FG +++ +VF +I +KNIVSWNICLKG RFG + A N+F EMP RD+VSWN M
Sbjct: 61 YFRFGNTLYDALKVFDEITDKNIVSWNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSM 120
Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVS 180
+SGCVS GF + A +F +MQ AG RPSEYTFSI+ S+V+C HGKQIHG MIR+G+++S
Sbjct: 121 ISGCVSGGFFDNAFCLFSKMQIAGMRPSEYTFSIVTSLVTCSCHGKQIHGGMIRNGMNLS 180
Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 240
N++LGNSLIDMYGK G VDY F +F++ME+VD+ISWNSLI GCHRSG+ LAL+QFF MR
Sbjct: 181 NLILGNSLIDMYGKLGCVDYAFGVFFAMEEVDIISWNSLISGCHRSGYAELALDQFFQMR 240
Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLR 300
+T HSPD+FT+S +I++C L LE GKQ FC K+GF SNSIV SAAIDLFSKCN L
Sbjct: 241 STKHSPDEFTISSVINVCCNLPNLEKGKQIFAFCLKVGFLSNSIVSSAAIDLFSKCNRLE 300
Query: 301 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
DA +LFEE + WD A+C++MISS A H D++ LFV LRENLRPT TLSS+L+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYARHDCVEDAVQLFVLTLRENLRPTEFTLSSLLNSAP 360
Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
+F P +LGSQ+H+LV+KLGFESD +V+SSL+D Y+KVGLID AMK+F ++ +DL SWNT
Sbjct: 361 IFLPAELGSQMHSLVVKLGFESDPIVASSLIDFYSKVGLIDYAMKIFANVGVKDLTSWNT 420
Query: 421 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
MIMG+ +NGK FEAL + L+ EG+ D++TLAGVL AC G VDEG+ +F +M E+
Sbjct: 421 MIMGMAHNGKVFEALNIFEELISEGIAPDKLTLAGVLFACNLGGLVDEGMTMFLSMGEEY 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
G+VP +EHY +VDLLS GK +EA++I+ +M +P+S W S+L AC IHGD + E V
Sbjct: 481 GIVPQDEHYMSIVDLLSSTGKLKEAIDIVAEMPYEPSSMIWESILRACVIHGDFKLTETV 540
Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
A+R+M+ E Q SLPY VLARAY RGRWES +RVRKAM+ G + V CS + I++HVY
Sbjct: 541 AQRMMQSEAQSSLPYLVLARAYEMRGRWESMIRVRKAMKLKGVRNVIGCSKIGIQNHVYT 600
Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
F+ D+LQ RG+ + L L+ WE+E
Sbjct: 601 FKADQLQPHRGKDIYLILRLLCWEME 626
BLAST of CmaCh04G024110 vs. NCBI nr
Match:
gi|694362310|ref|XP_009360668.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])
HSP 1 Score: 754.6 bits (1947), Expect = 1.6e-214
Identity = 368/626 (58.79%), Postives = 471/626 (75.24%), Query Frame = 1
Query: 1 MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
MH K L G H+ S S+YS LID CL+ SV+ K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1 MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNFVKIIHAQLIKVGFNSHTFLGNRCLDV 60
Query: 61 YALFGP-VHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCM 120
Y FG +H+ +V+ +I EKN+VSWNICLKGL RFG + AR++F EMPERD+VSWN M
Sbjct: 61 YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLGRFGEIQKARHMFAEMPERDVVSWNSM 120
Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVS 180
+SG VS GF + A+++F +MQ AG RPSEYTFSI++++V+ +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180
Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 240
NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+ LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240
Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLR 300
T ++PD+FT+S +I++C L +LE GKQ FCFK+GF SNSIV SAAIDL SKCN L
Sbjct: 241 GTEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300
Query: 301 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
DA +LFEE + WD A+C++MISS A HG D++ LFV LRENLRPT TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDAVQLFVLTLRENLRPTEFTLSSMLSSVS 360
Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
+F P + GSQIH+LV+KLGFESD +V+SSLVD+Y+K GL++ AMK+F++M +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420
Query: 421 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
+IMGL +NGK FE L K L +G D +TLAGVLLAC GF++EG+ IF TME E+
Sbjct: 421 IIMGLAHNGKVFETLSIFKELASKGAAPDNLTLAGVLLACNFGGFIEEGMTIFLTMEKEY 480
Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
G+VP EHY +VDLL RAGK EA++++ M + S W S+L AC IHGD + ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540
Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
A+R+MKL PQ SLPY VLARAY RG+WES + VRKAM G + V CSW+ I++HVY
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600
Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
F + LQ RG+ + L L+ E+E
Sbjct: 601 FNAEELQPPRGKDIYLILRLLSSEME 626
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PPR73_ARATH | 8.7e-165 | 46.63 | Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop... | [more] |
PP151_ARATH | 8.0e-110 | 34.69 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... | [more] |
PP280_ARATH | 4.6e-89 | 30.15 | Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... | [more] |
PP206_ARATH | 2.0e-84 | 31.22 | Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... | [more] |
PP274_ARATH | 6.4e-83 | 32.55 | Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN... | [more] |
Match Name | E-value | Identity | Description | |
M5W3X4_PRUPE | 9.9e-208 | 58.57 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1 | [more] |
B9H7L3_POPTR | 5.8e-200 | 55.04 | Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... | [more] |
A5C139_VITVI | 5.8e-200 | 59.08 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1 | [more] |
A0A072V224_MEDTR | 2.7e-197 | 55.20 | PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV... | [more] |
A0A0B2SRT0_GLYSO | 1.8e-193 | 53.83 | Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43980.1 | 4.2e-165 | 47.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G13600.1 | 4.5e-111 | 34.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53360.1 | 2.6e-90 | 30.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G02010.1 | 1.1e-85 | 31.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G56570.1 | 6.1e-84 | 31.41 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |