CmaCh04G024110 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G024110
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCma_Chr04 : 16642605 .. 16645811 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTTCCTGCTAAAGAATCTTCGTGGTGCGCACAGAGCTTCGTTTTCTCATTACTCCTATCTGATTGACCAGTGTTTAGCGTCTAGTTCTGTTCATATTGCGAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTAACAACAATACTTTTCTGGGTAATCGCTGTCTTCAGCTATACGCGTTATTTGGTCCCGTCCATGAATTTTTTAGAGTATTTGGTGATATCAAAGAGAAGAATATTGTATCTTGGAACATATGCTTGAAGGGGTTGTTTAGATTTGGTTATGTCGATGGTGCACGCAATCTGTTCGATGAAATGCCTGAGAGGGACATTGTTTCTTGGAATTGCATGATGTCTGGCTGCGTTTCTTCTGGGTTTGCTAATAAGGCTATGGATGTGTTTCTGGAGATGCAAGATGCTGGTTTTAGACCAAGTGAATATACGTTTTCAATTTTGCTTTCGGTTGTGTCGTGTCCTAGTCATGGCAAGCAAATTCATGGCAGTATGATTCGAAGTGGCATTGATGTGTCAAATGTGGTTCTTGGGAATTCATTGATTGATATGTATGGAAAATTCGGCCTTGTTGATTATATGTTTGTCATGTTTTATAGTATGGAAAAGGTGGATGTTATCTCTTGGAACTCTTTGATTTTGGGCTGCCACAGATCAGGCTTTAGAGTATTGGCACTAAATCAGTTCTTTCTTATGAGAGCCACTGGGCACTCTCCTGATCAGTTCACTGTATCAATAATGATAAGTTTATGTTCTTTCCTCCAAGAATTGGAACTGGGTAAGCAATTTCTTGGTTTCTGTTTCAAGATGGGATTTACTTCTAACAGCATTGTACTTAGTGCTGCTATTGACTTGTTTTCCAAATGCAACAGCTTGAGGGATGCAGCGCAGCTTTTTGAAGAAACCAATCAATGGGATCAAGCTCTTTGTGATGCCATGATCTCAAGCTTGGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATGCCTTAAGGGAGAACCTCAGGCCAACAGGGATTACACTCAGCAGTGTCCTAAGCTCCATTTCAGTCTTCACACCTCTGGACTTAGGTAGTCAAATTCATAATTTGGTTCTTAAGTTGGGTTTCGAGTCTGATACCGTTGTCAGTAGTTCGCTTGTCGACATGTATGCTAAAGTTGGATTAATTGACAATGCCATGAAAGTCTTTACGGATATGCCTTCGAGAGATTTAATATCTTGGAACACTATGATTATGGGTCTGGTTAACAATGGTAAATACTTTGAGGCCCTTGGCACCCTTAAAAACTTGGTTAAGGAAGGTGTAGTGGCTGATAGGATAACACTAGCTGGAGTCTTATTAGCTTGCAGGCATGCTGGTTTTGTTGATGAAGGGCTAAACATCTTCTCTACAATGGAAAATGAACATGGAGTTGTACCGACGAACGAGCATTATACTTGTGTGGTGGACTTACTGAGTCGGGCTGGTAAATTCGAAGAAGCAGTTAATATCATCGAAAAAATGTCGTGCCAACCTACTTCTACATTTTGGATATCGCTACTAGATGCGTGTGCGATTCATGGAGACCTGAACGTCATTGAAAGAGTTGCGGAGAGGGTGATGAAGCTGGAACCTCAATTGTCCTTACCATATTCGGTGCTGGCACGAGCATATGCAGCGAGAGGCCGATGGGAAAGCACTGTTCGTGTCAGGAAGGCCATGGAGAATATAGGTGCACAGAAGGTGAAGGCTTGCAGCTGGGTTGTGATCAAAGATCATGTGTATGCTTTCCAGGATGACCGGTTGCAGCATCTGCGGGGAGAAAGTTTGATTTCTGCGTTGGAGCTGATTGTTTGGGAGGTGGAATATGGGAATGAACACGAACAGTATGTTTAACGAACTATTCATTGGAAATGATGATCTGAATTATAAACATAGAAATTATAAAGCCTAGAGGATTTGTTTATCTCAATGTTACATATTTGGTTAGCTGTCTAAGATGTGTCAATGTATATCTCCCTATCTAAAGTTTACCTTTTAAATACAATTTCATCATTTATGTTAAAAAAGAAACTATTTCCATGGAAGAGAAACAAATAAAGGATTTTCATATACGAACTATTTGATTTGCCAGTGGTGATTTAGTAACCCTAATTAAGAACCACTATTTTTCGTTCATCTCTTCAACGGATGTGAGATCTCATGATCCACCCCCTTCGGGGGCCAGTGTTGGATCTCATGGTCTACCTCTCTTGGGAGCCCGCGTTCTCGCTAGCACATCGTTCGATATCTGGCTCTGATACACCACTAGCAGATATTGTTTGTTTTGGCTTGTTACGTATCGTCGTCAGCCTCAGTTTTTAAACGGGTTTGTTAGGAAAAAGTTTCTACACTCTTTATAAAGAATGTTTGGTTCCCCTCTCAAACCGACGTAGGATCTCACAATCCACTGGGCTCAACATCCTCGCTAGCACACCGCTCCGCGTTTGGCTTTGATGCAATTTTTTGATTTGTGTACGTCATCCTTGCACGGGGCCATGCTAATCATTTCTCTATCGTTCCAATTTTATCGAATGTGCCCCAAGTTTATTACAAAGATTATTTGGCTACACGCCTATTCTTACACAATATCATTAAAATTTGTGTTAACATAATGTAATAAATCAGATAAAAAAAACCCAATAAACAAATCATAAAAATTCAGATTAAGGAATCAAAGTTTATTCCCAGCGAAGAAAAAGAAAAATAATTTTAAAATCATTCCTGCAAATAAGCGAAGAAGAAGGAATGAACAGCGATTGGCGAAAGCGACGGACTACGGAGGCGGGTTAAATAATGAGCGAAGAAACATAGAAGAAGAATTTGGAAGTTTTAGAAGCGTCTGAATGGCCTCTAGCATCCAGCTCAATTCAATTTCTGAAATTCCTCGCGATCTTCTCTTTGGACGCCGACAATTTCACGAATATCCTCAAGCATATCTTCCTACAATTTCACGAATTATTATGTTAATCGCCTCCAGTACCAGTATGAGAACGAAATCCCCAAGTTATCAACAATTTTTGATGCTTCTGATCATTGGGCAGAAATCCCCATCATACTACAGAGCTGTTCTTCACTACGGCAGCAGTTTTGATTTCGAATCCCTCTCTCTTTCTCACGGATATAAGGAACGAACCAGGGGTTTCCATTGCAACCTAG

mRNA sequence

ATGCACTTCCTGCTAAAGAATCTTCGTGGTGCGCACAGAGCTTCGTTTTCTCATTACTCCTATCTGATTGACCAGTGTTTAGCGTCTAGTTCTGTTCATATTGCGAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTAACAACAATACTTTTCTGGGTAATCGCTGTCTTCAGCTATACGCGTTATTTGGTCCCGTCCATGAATTTTTTAGAGTATTTGGTGATATCAAAGAGAAGAATATTGTATCTTGGAACATATGCTTGAAGGGGTTGTTTAGATTTGGTTATGTCGATGGTGCACGCAATCTGTTCGATGAAATGCCTGAGAGGGACATTGTTTCTTGGAATTGCATGATGTCTGGCTGCGTTTCTTCTGGGTTTGCTAATAAGGCTATGGATGTGTTTCTGGAGATGCAAGATGCTGGTTTTAGACCAAGTGAATATACGTTTTCAATTTTGCTTTCGGTTGTGTCGTGTCCTAGTCATGGCAAGCAAATTCATGGCAGTATGATTCGAAGTGGCATTGATGTGTCAAATGTGGTTCTTGGGAATTCATTGATTGATATGTATGGAAAATTCGGCCTTGTTGATTATATGTTTGTCATGTTTTATAGTATGGAAAAGGTGGATGTTATCTCTTGGAACTCTTTGATTTTGGGCTGCCACAGATCAGGCTTTAGAGTATTGGCACTAAATCAGTTCTTTCTTATGAGAGCCACTGGGCACTCTCCTGATCAGTTCACTGTATCAATAATGATAAGTTTATGTTCTTTCCTCCAAGAATTGGAACTGGGTAAGCAATTTCTTGGTTTCTGTTTCAAGATGGGATTTACTTCTAACAGCATTGTACTTAGTGCTGCTATTGACTTGTTTTCCAAATGCAACAGCTTGAGGGATGCAGCGCAGCTTTTTGAAGAAACCAATCAATGGGATCAAGCTCTTTGTGATGCCATGATCTCAAGCTTGGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATGCCTTAAGGGAGAACCTCAGGCCAACAGGGATTACACTCAGCAGTGTCCTAAGCTCCATTTCAGTCTTCACACCTCTGGACTTAGGTAGTCAAATTCATAATTTGGTTCTTAAGTTGGGTTTCGAGTCTGATACCGTTGTCAGTAGTTCGCTTGTCGACATGTATGCTAAAGTTGGATTAATTGACAATGCCATGAAAGTCTTTACGGATATGCCTTCGAGAGATTTAATATCTTGGAACACTATGATTATGGGTCTGGTTAACAATGGTAAATACTTTGAGGCCCTTGGCACCCTTAAAAACTTGGTTAAGGAAGGTGTAGTGGCTGATAGGATAACACTAGCTGGAGTCTTATTAGCTTGCAGGCATGCTGGTTTTGTTGATGAAGGGCTAAACATCTTCTCTACAATGGAAAATGAACATGGAGTTGTACCGACGAACGAGCATTATACTTGTGTGGTGGACTTACTGAGTCGGGCTGGTAAATTCGAAGAAGCAGTTAATATCATCGAAAAAATGTCGTGCCAACCTACTTCTACATTTTGGATATCGCTACTAGATGCGTGTGCGATTCATGGAGACCTGAACGTCATTGAAAGAGTTGCGGAGAGGGTGATGAAGCTGGAACCTCAATTGTCCTTACCATATTCGGTGCTGGCACGAGCATATGCAGCGAGAGGCCGATGGGAAAGCACTGTTCGTGTCAGGAAGGCCATGGAGAATATAGGTGCACAGAAGGTGAAGGCTTGCAGCTGGGTTGTGATCAAAGATCATGTGTATGCTTTCCAGGATGACCGGTTGCAGCATCTGCGGGGAGAAAGTTTGATTTCTGCGTTGGAGCTGATTGTTTGGGAGGTGGAATATGGGAATGAACACGAACAATTAAGGAATCAAAGTTTATTCCCAGCGAAGAAAAAGAAAAATAATTTTAAAATCATTCCTGCAAATAAGCGAAGAAGAAGGAATGAACAGCGATTGGCGAAAGCGACGGACTACGGAGGCGGAAATCCCCATCATACTACAGAGCTGTTCTTCACTACGGCAGCAGTTTTGATTTCGAATCCCTCTCTCTTTCTCACGGATATAAGGAACGAACCAGGGGTTTCCATTGCAACCTAG

Coding sequence (CDS)

ATGCACTTCCTGCTAAAGAATCTTCGTGGTGCGCACAGAGCTTCGTTTTCTCATTACTCCTATCTGATTGACCAGTGTTTAGCGTCTAGTTCTGTTCATATTGCGAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTAACAACAATACTTTTCTGGGTAATCGCTGTCTTCAGCTATACGCGTTATTTGGTCCCGTCCATGAATTTTTTAGAGTATTTGGTGATATCAAAGAGAAGAATATTGTATCTTGGAACATATGCTTGAAGGGGTTGTTTAGATTTGGTTATGTCGATGGTGCACGCAATCTGTTCGATGAAATGCCTGAGAGGGACATTGTTTCTTGGAATTGCATGATGTCTGGCTGCGTTTCTTCTGGGTTTGCTAATAAGGCTATGGATGTGTTTCTGGAGATGCAAGATGCTGGTTTTAGACCAAGTGAATATACGTTTTCAATTTTGCTTTCGGTTGTGTCGTGTCCTAGTCATGGCAAGCAAATTCATGGCAGTATGATTCGAAGTGGCATTGATGTGTCAAATGTGGTTCTTGGGAATTCATTGATTGATATGTATGGAAAATTCGGCCTTGTTGATTATATGTTTGTCATGTTTTATAGTATGGAAAAGGTGGATGTTATCTCTTGGAACTCTTTGATTTTGGGCTGCCACAGATCAGGCTTTAGAGTATTGGCACTAAATCAGTTCTTTCTTATGAGAGCCACTGGGCACTCTCCTGATCAGTTCACTGTATCAATAATGATAAGTTTATGTTCTTTCCTCCAAGAATTGGAACTGGGTAAGCAATTTCTTGGTTTCTGTTTCAAGATGGGATTTACTTCTAACAGCATTGTACTTAGTGCTGCTATTGACTTGTTTTCCAAATGCAACAGCTTGAGGGATGCAGCGCAGCTTTTTGAAGAAACCAATCAATGGGATCAAGCTCTTTGTGATGCCATGATCTCAAGCTTGGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATGCCTTAAGGGAGAACCTCAGGCCAACAGGGATTACACTCAGCAGTGTCCTAAGCTCCATTTCAGTCTTCACACCTCTGGACTTAGGTAGTCAAATTCATAATTTGGTTCTTAAGTTGGGTTTCGAGTCTGATACCGTTGTCAGTAGTTCGCTTGTCGACATGTATGCTAAAGTTGGATTAATTGACAATGCCATGAAAGTCTTTACGGATATGCCTTCGAGAGATTTAATATCTTGGAACACTATGATTATGGGTCTGGTTAACAATGGTAAATACTTTGAGGCCCTTGGCACCCTTAAAAACTTGGTTAAGGAAGGTGTAGTGGCTGATAGGATAACACTAGCTGGAGTCTTATTAGCTTGCAGGCATGCTGGTTTTGTTGATGAAGGGCTAAACATCTTCTCTACAATGGAAAATGAACATGGAGTTGTACCGACGAACGAGCATTATACTTGTGTGGTGGACTTACTGAGTCGGGCTGGTAAATTCGAAGAAGCAGTTAATATCATCGAAAAAATGTCGTGCCAACCTACTTCTACATTTTGGATATCGCTACTAGATGCGTGTGCGATTCATGGAGACCTGAACGTCATTGAAAGAGTTGCGGAGAGGGTGATGAAGCTGGAACCTCAATTGTCCTTACCATATTCGGTGCTGGCACGAGCATATGCAGCGAGAGGCCGATGGGAAAGCACTGTTCGTGTCAGGAAGGCCATGGAGAATATAGGTGCACAGAAGGTGAAGGCTTGCAGCTGGGTTGTGATCAAAGATCATGTGTATGCTTTCCAGGATGACCGGTTGCAGCATCTGCGGGGAGAAAGTTTGATTTCTGCGTTGGAGCTGATTGTTTGGGAGGTGGAATATGGGAATGAACACGAACAATTAAGGAATCAAAGTTTATTCCCAGCGAAGAAAAAGAAAAATAATTTTAAAATCATTCCTGCAAATAAGCGAAGAAGAAGGAATGAACAGCGATTGGCGAAAGCGACGGACTACGGAGGCGGAAATCCCCATCATACTACAGAGCTGTTCTTCACTACGGCAGCAGTTTTGATTTCGAATCCCTCTCTCTTTCTCACGGATATAAGGAACGAACCAGGGGTTTCCATTGCAACCTAG

Protein sequence

MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVEYGNEHEQLRNQSLFPAKKKKNNFKIIPANKRRRRNEQRLAKATDYGGGNPHHTTELFFTTAAVLISNPSLFLTDIRNEPGVSIAT
BLAST of CmaCh04G024110 vs. Swiss-Prot
Match: PPR73_ARATH (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E58 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 8.7e-165
Identity = 291/624 (46.63%), Postives = 414/624 (66.35%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M  LL+   G    S  ++S L+++ L S S  +AK +HAQLL+ G    T+ GNRCLQL
Sbjct: 1   MFQLLRRAHGLCMPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQL 60

Query: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
           Y   G V    ++F DI +KN ++WN+CLKGLF+ GY++ A +LFDEMPERD+VSWN M+
Sbjct: 61  YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
           SG VS GF    + VF +MQ    RP+E+TFSIL S+V+C  HG+QIHG+ I SG+   N
Sbjct: 121 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
           +V+ NS++DMY + G+ DY   +F +ME  DV+SWN LIL C  SG + +AL+QF+LMR 
Sbjct: 181 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
               PD++TVS+++S+CS L+EL  GKQ L  C KMGF SNSIVL A ID+FSKCN L D
Sbjct: 241 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 300

Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           + +LF E  +WD  LC++MI S +WH    D++ LF+ A+ +++RP   T SSVLSS++ 
Sbjct: 301 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
              LD G+ +H+LV+KLGF+ DT V++SL++MY K G +D AM VF     +DLI WNT+
Sbjct: 361 -VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 420

Query: 421 IMGLVNNGKYFEALGTLKN-LVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
           IMGL  N +  E+L      L+ + +  DR+TL G+L+AC +AGFV+EG+ IFS+ME  H
Sbjct: 421 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
           GV P NEHY C+++LL R G   EA +I +K+  +P+S  W  +L A    GD  + E V
Sbjct: 481 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 540

Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
           A+ +++ EP+ S PY VL + Y    RWE++V++R AM     +  +  S + I+  V++
Sbjct: 541 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 600

Query: 601 FQDDRLQHLRGESLISALELIVWE 624
           F+ D+LQ   G    + L+L+ W+
Sbjct: 601 FEADQLQIHGGHDTCALLDLLSWD 623

BLAST of CmaCh04G024110 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 8.0e-110
Identity = 230/663 (34.69%), Postives = 368/663 (55.51%), Query Frame = 1

Query: 17  SHYSYLIDQCLASS-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFG 76
           S ++ L+D C+ S  S    + +HA ++K G +N  F+ NR +  Y+  G + +  +VF 
Sbjct: 20  SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79

Query: 77  DIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
            + ++NI +WN  + GL + G++D A +LF  MPERD  +WN M+SG        +A+  
Sbjct: 80  KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139

Query: 137 FLEMQDAGFRPSEYTFSILLSVVS---CPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYG 196
           F  M   GF  +EY+F+ +LS  S     + G Q+H S+I     +S+V +G++L+DMY 
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199

Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSI 256
           K G V+    +F  M   +V+SWNSLI    ++G  V AL+ F +M  +   PD+ T++ 
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259

Query: 257 MISLCSFLQELELGKQFLGFCFKMGFTSNSIVLS-AAIDLFSKCNSLRDAAQLFE----- 316
           +IS C+ L  +++G++  G   K     N I+LS A +D+++KC+ +++A  +F+     
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319

Query: 317 ----ETN----------------------QWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
               ET+                      + +    +A+I+    +G   +++ LF    
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379

Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVSSSLVDMYA 436
           RE++ PT  + +++L + +    L LG Q H  VLK GF      E D  V +SL+DMY 
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439

Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAG 496
           K G ++    VF  M  RD +SWN MI+G   NG   EAL   + +++ G   D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499

Query: 497 VLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQ 556
           VL AC HAGFV+EG + FS+M  + GV P  +HYTC+VDLL RAG  EEA ++IE+M  Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559

Query: 557 PTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVR 616
           P S  W SLL AC +H ++ + + VAE+++++EP  S PY +L+  YA  G+WE  + VR
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619

Query: 617 KAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVEYGNEHEQLR 638
           K+M   G  K   CSW+ I+ H + F      H R + + S L++++ E+    +H ++ 
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIG 679

BLAST of CmaCh04G024110 vs. Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.6e-89
Identity = 183/607 (30.15%), Postives = 313/607 (51.57%), Query Frame = 1

Query: 19  YSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIK 78
           +  +I  C +SS V + K +HAQ++KL  +++    N  + +Y                 
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV---------------- 230

Query: 79  EKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
                          RF  +  A  +F  +P +D++SW+ +++G    GF  +A+    E
Sbjct: 231 ---------------RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 290

Query: 139 MQDAG-FRPSEYTFSILLSVVSC---PSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKF 198
           M   G F P+EY F   L   S    P +G QIHG  I+S +   N + G SL DMY + 
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350

Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMI 258
           G ++    +F  +E+ D  SWN +I G   +G+   A++ F  MR++G  PD  ++  ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410

Query: 259 SLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEE-TNQWDQ 318
              +    L  G Q   +  K GF ++  V ++ + +++ C+ L     LFE+  N  D 
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470

Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
              + ++++   H    + + LF   L     P  IT+ ++L      + L LGSQ+H  
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530

Query: 379 VLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
            LK G   +  + + L+DMYAK G +  A ++F  M +RD++SW+T+I+G   +G   EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590

Query: 439 LGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVD 498
           L   K +   G+  + +T  GVL AC H G V+EGL +++TM+ EHG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650

Query: 499 LLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLP 558
           LL+RAG+  EA   I++M  +P    W +LL AC   G++++ ++ AE ++K++P  S  
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710

Query: 559 YSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESL 618
           + +L   +A+ G WE+   +R +M+    +K+   SW+ I+D ++ F  + + H   + +
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 745

Query: 619 ISALELI 621
            + L  I
Sbjct: 771 YTVLHNI 745

BLAST of CmaCh04G024110 vs. Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-84
Identity = 177/567 (31.22%), Postives = 303/567 (53.44%), Query Frame = 1

Query: 65  GPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCV 124
           G VH F    G      +   N+ LK       +D A  LF+E+PE+D V++N +++G  
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226

Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVVSCPSH--GKQIHGSMIRSGIDVSNV 184
             G   +++ +FL+M+ +G +PS++TFS +L +VV       G+Q+H   + +G    + 
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286

Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRAT 244
            +GN ++D Y K   V    ++F  M ++D +S+N +I    ++     +L+ F  M+  
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346

Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSI--VLSAAIDLFSKCNSLR 304
           G     F  + M+S+ + L  L++G+Q    C  +  T++SI  V ++ +D+++KC    
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406

Query: 305 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
           +A  +F+   Q       A+IS     G     + LF      NLR    T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466

Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
            F  L LG Q+H  +++ G   +    S LVDMYAK G I +A++VF +MP R+ +SWN 
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526

Query: 425 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 484
           +I    +NG    A+G    +++ G+  D +++ GVL AC H GFV++G   F  M   +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586

Query: 485 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 544
           G+ P  +HY C++DLL R G+F EA  ++++M  +P    W S+L+AC IH + ++ ER 
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646

Query: 545 AERVMKLEP-QLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVY 604
           AE++  +E  + +  Y  ++  YAA G WE    V+KAM   G +KV A SWV +   ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706

Query: 605 AFQDDRLQHLRGESLISALELIVWEVE 626
            F  +   H  G+ ++  +  +  E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730

BLAST of CmaCh04G024110 vs. Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.4e-83
Identity = 195/599 (32.55%), Postives = 314/599 (52.42%), Query Frame = 1

Query: 16  FSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFG 75
           F  +  L+ + +A   +   K++HA  +K  + ++T+L N  + LY+  G +      F 
Sbjct: 8   FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 76  DIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 135
             +E N+ S+N+ +K   +   +  AR LFDE+P+ D VS+N ++SG   +     AM +
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127

Query: 136 FLEMQDAGFRPSEYTFSILLSVVSCPSHG--KQIHGSMIRSGIDVSNVVLGNSLIDMYGK 195
           F  M+  GF    +T S L++   C      KQ+H   +  G D  + V  N+ +  Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSV-NNAFVTYYSK 187

Query: 196 FGLVDYMFVMFYSMEKV-DVISWNSLIL--GCHRSGFRVLALNQFFLMRATGHSPDQFTV 255
            GL+     +FY M+++ D +SWNS+I+  G H+ G + LAL +  + +  G   D FT+
Sbjct: 188 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK--GFKIDMFTL 247

Query: 256 SIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKC---NSLRDAAQLFEE 315
           + +++  + L  L  G+QF G   K GF  NS V S  ID +SKC   + + D+ ++F+E
Sbjct: 248 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 307

Query: 316 TNQWDQALCDAMISSLAWHGHW-RDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDL 375
               D  + + MIS  + +     +++  F    R   RP   +   V S+ S  +    
Sbjct: 308 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 367

Query: 376 GSQIHNLVLKLGFESDTV-VSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLV 435
             QIH L +K    S+ + V+++L+ +Y K G + +A  VF  MP  + +S+N MI G  
Sbjct: 368 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 427

Query: 436 NNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTN 495
            +G   EAL   + ++  G+  ++IT   VL AC H G VDEG   F+TM+    + P  
Sbjct: 428 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 487

Query: 496 EHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMK 555
           EHY+C++DLL RAGK EEA   I+ M  +P S  W +LL AC  H ++ + ER A  +M 
Sbjct: 488 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 547

Query: 556 LEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVI--KDHVYAFQD 603
           ++P  + PY +LA  YA   +WE    VRK+M     +K   CSW+ +  K HV+  +D
Sbjct: 548 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602

BLAST of CmaCh04G024110 vs. TrEMBL
Match: M5W3X4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 9.9e-208
Identity = 352/601 (58.57%), Postives = 457/601 (76.04%), Query Frame = 1

Query: 26  CLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFG-PVHEFFRVFGDIKEKNIVS 85
           CL+  S++ AK IHAQL+K+G N++TFLGNRCL +Y  FG  V++  +VF +I +KNIVS
Sbjct: 22  CLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIVS 81

Query: 86  WNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGF 145
           WNICLKG  RFG +  A N+F EMP RD+VSWN M+SGCVS GF + A  +F +MQ AG 
Sbjct: 82  WNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQIAGM 141

Query: 146 RPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLVDYMFVMF 205
           RPSEYTFSI++S+V+C  HGKQIHG MIR+G+++SN++LGNSLIDMYGK G VDY F +F
Sbjct: 142 RPSEYTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVF 201

Query: 206 YSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELE 265
           ++ME+VD+ISWNSLI GCHRSG+  LAL+QFF MR+T HSPD+FT+S +I++C  L  LE
Sbjct: 202 FTMEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNLE 261

Query: 266 LGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCDAMISSLA 325
            GKQ   FC K+GF SNSI+ SAAIDLFSKCN L DA +LFEE + WD A+C++MISS A
Sbjct: 262 KGKQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYA 321

Query: 326 WHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTV 385
            H    D++ LFV  LRENLRPT  TLSS+L+S S+F P +LGSQIH+LV+KLGFESD +
Sbjct: 322 RHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAELGSQIHSLVVKLGFESDPI 381

Query: 386 VSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEG 445
           V+SSL+D Y+KVGLI+ AMK+F ++  +DL SWNTMI+G+ +NGK FE L   + L+ EG
Sbjct: 382 VASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISEG 441

Query: 446 VVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEA 505
           +  D++TLAGVLLAC   G VDEG+ +F +ME E+G+VP +EHY  +VDLLS  GK +EA
Sbjct: 442 IAPDKLTLAGVLLACNLGGLVDEGMTMFLSMEKEYGIVPQDEHYMSIVDLLSSTGKLKEA 501

Query: 506 VNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAAR 565
           ++I+ +M  + +S  W  +L AC IHGD  + E VA R+M+ E Q SLPY VLARAY  R
Sbjct: 502 IDIVAEMPYEASSMIWELILRACVIHGDFKLTETVAHRMMQSEAQSSLPYLVLARAYEMR 561

Query: 566 GRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEV 625
           GRWEST+RVRKAM+  G + V  CS + I++HVY F+ D+LQ  RG+ +   L L+ WE+
Sbjct: 562 GRWESTIRVRKAMKLKGVRNVIGCSKIGIQNHVYTFKADQLQPHRGKDIYLILRLLCWEM 621

BLAST of CmaCh04G024110 vs. TrEMBL
Match: B9H7L3_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0005s20740g PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 5.8e-200
Identity = 344/625 (55.04%), Postives = 454/625 (72.64%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M+ L+K      R S S+YSYLID C +  S+  A+  HAQL+K+GLN +TFLGNRCL L
Sbjct: 1   MYPLIKQCHRVSRTSLSYYSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDL 60

Query: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
           Y+ FG V++  +VF DI  KNIVSWNICLKGL +F  +  A ++FD+MPERD+VSWN M+
Sbjct: 61  YSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
           SG  S G+ + A++ F EMQ  G RPSE+T+SIL+SVV    HGK+IHGS++RSG+   N
Sbjct: 121 SGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVVFGVRHGKEIHGSIVRSGLGALN 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
           VVLGNSLIDMYGKF  +DY   +F +ME++DVISWNSLI  C +SG+  LAL++F +MR+
Sbjct: 181 VVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRS 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
            G+SPD+F+VS++I+ C  L+ LE GKQ    C K+GF  N+I+ SA IDLFSKCN L D
Sbjct: 241 LGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLED 300

Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           + +LFEE +QWD A+C++MISS A  G   D + LFV  L++++RPT  TLSSVL S S+
Sbjct: 301 SVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSI 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
              L+ G+Q H+L +K G E D +V+SSLV+MY+K G ID ++K+F  M +RDLI+WNTM
Sbjct: 361 L-KLEQGTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTM 420

Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
           IMGL +NG+ FEAL T K L++ G+  DRITLAGVLLAC   GF+ EG+ +FS+ME  +G
Sbjct: 421 IMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
           V P+NEHY C VDLL +AG+ +EA+ + E M  +P S  W S+L AC IHGDL + ERVA
Sbjct: 481 VKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVA 540

Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
           ER+M+LEPQ SLPY VLAR +  RG+WE  VRV+KAM+    +KV  CSW+ +K+ VY F
Sbjct: 541 ERLMELEPQSSLPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKVIGCSWIGVKNQVYTF 600

Query: 601 QDDRLQHLRGESLISALELIVWEVE 626
             D+LQH RG+ +   L L+ WE E
Sbjct: 601 TADQLQHHRGKEIYLVLRLLNWETE 624

BLAST of CmaCh04G024110 vs. TrEMBL
Match: A5C139_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 5.8e-200
Identity = 345/584 (59.08%), Postives = 441/584 (75.51%), Query Frame = 1

Query: 42   LLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGA 101
            L+K+G N +TFLGNRCL LY+  G  ++  RVF DI +KN++SWNI LK   RFG ++ A
Sbjct: 736  LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795

Query: 102  RNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCP 161
            R++FDEMP+RD+VSWN M+SG VS G  + A   F EMQ AG RPS +T+S LLS VS  
Sbjct: 796  RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855

Query: 162  SHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILG 221
              GKQIH SMIR+G+D+SNVV+GNSLI MYGKFG+VDY F +F +ME++D+ISWNSLI  
Sbjct: 856  CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWS 915

Query: 222  CHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSN 281
            C +SG++ LAL QF LMR+ G+SPDQFTVS +I++CS LQ+LE G+Q    C ++GF SN
Sbjct: 916  CGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSN 975

Query: 282  SIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALR 341
            SIV SA+IDLFSKCN L D+ ++FEE  QWD  LC+AMISS AWHG   +++ LFV  LR
Sbjct: 976  SIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLR 1035

Query: 342  ENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDN 401
            ENLRPT  TLS VLS++S+  P+D GSQIH+LV+K G ESD +V+SSLV+MYAK GLID+
Sbjct: 1036 ENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDS 1095

Query: 402  AMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRH 461
            AMK F  + +RDLISWNTMIMGL  NG+  +AL   K L+  G   D ITLAGVLLAC  
Sbjct: 1096 AMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNV 1155

Query: 462  AGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWI 521
             G VDEGL+IFS+ME E+GV+P  EHY C+VD++SR GK +EA++I+E M  +P+   W 
Sbjct: 1156 GGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG 1215

Query: 522  SLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIG 581
            SLL AC I+GDL   ERVAERVM+LEPQ SLPY VLA+AY  RGRWES VRV +AM+  G
Sbjct: 1216 SLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKG 1275

Query: 582  AQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVE 626
             +KV  CSW+ IK+HV+ F++++L H+ G+ +   L L++ E+E
Sbjct: 1276 VRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIE 1319

BLAST of CmaCh04G024110 vs. TrEMBL
Match: A0A072V224_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 2.7e-197
Identity = 345/625 (55.20%), Postives = 451/625 (72.16%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M+   K+ +  H ++ SH S L+D CL+  S +    +HA  LKLGLN+ T+LGNRC+ L
Sbjct: 1   MYPFFKHTQYLH-STLSHCSTLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDL 60

Query: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
           Y  FG +++  +VF DI  KN  SWNICLKGLF+ G V  A  +FDEMP RD+VSWN M+
Sbjct: 61  YTEFGNINDALKVFDDISYKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
           SG  S GF++ A+ VF+EMQ AG RPS +TFSIL S+VS     K++HG MIRSG+++SN
Sbjct: 121 SGYASCGFSSHALGVFVEMQGAGVRPSGFTFSILTSLVSSSCRAKEVHGMMIRSGMELSN 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
           VV+GNSLI MYGKF LVDY F +  SM+++D ISWNSLI  CHR+G + LAL QF  M+A
Sbjct: 181 VVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKA 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
               PD+FT S ++S+CS L++LE GKQ   FCFK+GF  NSIV SAAIDLFSKCN L D
Sbjct: 241 AELLPDEFTCSTLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 300

Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           A +LFEE  QWD ALC++MIS  A H    D++ LF+  LR+N+RPT  T+S +LSS+S+
Sbjct: 301 AVRLFEEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSI 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           F P+++G+QIH LV K GFESD+VV++SLVDMYAK G IDNA+ +F ++ ++DL+SWNT+
Sbjct: 361 FLPVEVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTI 420

Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
           +MGL  NGK    +   + L +EG+  DRITLA VLLAC +   VDEG+ IFS ME E G
Sbjct: 421 MMGLSYNGKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
           V P  EHY+ VV++L RAG  +EAV+I+EKM  + T+  W S+L ACA+ GDL  IE VA
Sbjct: 481 VKPEEEHYSYVVEMLCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVA 540

Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
            ++M+  PQ+SLPY VLA+ Y   GRWES VRVRKAMEN G+++   CSWV IK+HVY F
Sbjct: 541 TKIMERAPQISLPYLVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWVGIKNHVYTF 600

Query: 601 QDDRLQHLRGESLISALELIVWEVE 626
           + ++LQH  G+ +   L L+VWE+E
Sbjct: 601 ESNQLQHYGGKDIYLLLNLLVWEME 624

BLAST of CmaCh04G024110 vs. TrEMBL
Match: A0A0B2SRT0_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_018329 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.8e-193
Identity = 337/626 (53.83%), Postives = 452/626 (72.20%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           M+ LLK  +G +  S S  S L++ CL+  S++  K +HA  LKLGLN  T+LGNRCL L
Sbjct: 188 MYPLLKQAQGPY-PSLSCCSLLLNHCLSQKSLNFVKIVHAHFLKLGLNTYTYLGNRCLDL 247

Query: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
           Y+ FG +++  +VF DI  KN  SWNICLKGL + G    A ++FD MP RD+VSWN M+
Sbjct: 248 YSEFGHINDALKVFDDISHKNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSWNSMI 307

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
           SG  S G+ + A+++F+EMQ  G RPS +TFSIL+S+VS   H KQIH  MIRSG+D+ N
Sbjct: 308 SGYASCGYLSHALELFVEMQGTGVRPSGFTFSILMSLVSSSPHAKQIHCRMIRSGVDLDN 367

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
           VVLGNSLI++YGK GLV+Y F +   M++ DVISWNSLI  CH +G   LAL QF+ MR 
Sbjct: 368 VVLGNSLINIYGKLGLVEYAFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFYRMRG 427

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
               PDQFT S+++S+CS L++L+ GKQ   FCFKMGF  NSIV SAAIDLFSKCN L D
Sbjct: 428 AELLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLED 487

Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           + +LF++ +QWD  LC++MISS A H    +++ LFV  LR+N+RPT   +SS+LSS+S+
Sbjct: 488 SVRLFKKQDQWDSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSI 547

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           F P+++G+QIH+LV KLGFESD VV++SLVDMYAK G I +A+ +F +M  +DL+SWNT+
Sbjct: 548 FLPVEVGNQIHSLVPKLGFESDAVVANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTI 607

Query: 421 IMGLVNNGKYFEALGTLKNLV-KEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
           +MGL   G+    +   + L+ +EG++ DRITL  VLLAC +   VDEG+ IFS+ME E 
Sbjct: 608 MMGLTYYGRVSLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVDEGIKIFSSMEMEF 667

Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
           GV P  EHY CVV++LS+AGK +EA++IIE M C+ TS  W S+L ACAI+GDL +IE V
Sbjct: 668 GVKPGEEHYACVVEMLSKAGKLKEAIDIIETMPCRTTSDIWRSILSACAIYGDLQIIEGV 727

Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
           A+++M  E Q SLPY VLA+AY  RGRW+S VR+RKA+EN G ++    SW+ I+++VY 
Sbjct: 728 AKKIMDRESQTSLPYLVLAQAYQMRGRWDSMVRMRKAVENRGTKEFIGHSWIGIRNNVYT 787

Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
           F  ++LQH  G+ L   L L+VWE+E
Sbjct: 788 FASNQLQHYGGKDLYLVLNLLVWEME 812

BLAST of CmaCh04G024110 vs. TAIR10
Match: AT1G43980.1 (AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 578.9 bits (1491), Expect = 4.2e-165
Identity = 286/607 (47.12%), Postives = 408/607 (67.22%), Query Frame = 1

Query: 18  HYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDI 77
           ++S L+++ L S S  +AK +HAQLL+ G    T+ GNRCLQLY   G V    ++F DI
Sbjct: 6   YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65

Query: 78  KEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFL 137
            +KN ++WN+CLKGLF+ GY++ A +LFDEMPERD+VSWN M+SG VS GF    + VF 
Sbjct: 66  PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125

Query: 138 EMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKFGLV 197
           +MQ    RP+E+TFSIL S+V+C  HG+QIHG+ I SG+   N+V+ NS++DMY + G+ 
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185

Query: 198 DYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMISLC 257
           DY   +F +ME  DV+SWN LIL C  SG + +AL+QF+LMR     PD++TVS+++S+C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245

Query: 258 SFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQWDQALCD 317
           S L+EL  GKQ L  C KMGF SNSIVL A ID+FSKCN L D+ +LF E  +WD  LC+
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305

Query: 318 AMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKL 377
           +MI S +WH    D++ LF+ A+ +++RP   T SSVLSS++    LD G+ +H+LV+KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 365

Query: 378 GFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTL 437
           GF+ DT V++SL++MY K G +D AM VF     +DLI WNT+IMGL  N +  E+L   
Sbjct: 366 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 425

Query: 438 KN-LVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLS 497
              L+ + +  DR+TL G+L+AC +AGFV+EG+ IFS+ME  HGV P NEHY C+++LL 
Sbjct: 426 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 485

Query: 498 RAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSV 557
           R G   EA +I +K+  +P+S  W  +L A    GD  + E VA+ +++ EP+ S PY V
Sbjct: 486 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 545

Query: 558 LARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISA 617
           L + Y    RWE++V++R AM     +  +  S + I+  V++F+ D+LQ   G    + 
Sbjct: 546 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCAL 605

Query: 618 LELIVWE 624
           L+L+ W+
Sbjct: 606 LDLLSWD 611

BLAST of CmaCh04G024110 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 399.4 bits (1025), Expect = 4.5e-111
Identity = 230/663 (34.69%), Postives = 368/663 (55.51%), Query Frame = 1

Query: 17  SHYSYLIDQCLASS-SVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFG 76
           S ++ L+D C+ S  S    + +HA ++K G +N  F+ NR +  Y+  G + +  +VF 
Sbjct: 20  SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79

Query: 77  DIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDV 136
            + ++NI +WN  + GL + G++D A +LF  MPERD  +WN M+SG        +A+  
Sbjct: 80  KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139

Query: 137 FLEMQDAGFRPSEYTFSILLSVVS---CPSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYG 196
           F  M   GF  +EY+F+ +LS  S     + G Q+H S+I     +S+V +G++L+DMY 
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYS 199

Query: 197 KFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSI 256
           K G V+    +F  M   +V+SWNSLI    ++G  V AL+ F +M  +   PD+ T++ 
Sbjct: 200 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 259

Query: 257 MISLCSFLQELELGKQFLGFCFKMGFTSNSIVLS-AAIDLFSKCNSLRDAAQLFE----- 316
           +IS C+ L  +++G++  G   K     N I+LS A +D+++KC+ +++A  +F+     
Sbjct: 260 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 319

Query: 317 ----ETN----------------------QWDQALCDAMISSLAWHGHWRDSMWLFVYAL 376
               ET+                      + +    +A+I+    +G   +++ LF    
Sbjct: 320 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 379

Query: 377 RENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLGF------ESDTVVSSSLVDMYA 436
           RE++ PT  + +++L + +    L LG Q H  VLK GF      E D  V +SL+DMY 
Sbjct: 380 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 439

Query: 437 KVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAG 496
           K G ++    VF  M  RD +SWN MI+G   NG   EAL   + +++ G   D IT+ G
Sbjct: 440 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 499

Query: 497 VLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQ 556
           VL AC HAGFV+EG + FS+M  + GV P  +HYTC+VDLL RAG  EEA ++IE+M  Q
Sbjct: 500 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 559

Query: 557 PTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLPYSVLARAYAARGRWESTVRVR 616
           P S  W SLL AC +H ++ + + VAE+++++EP  S PY +L+  YA  G+WE  + VR
Sbjct: 560 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 619

Query: 617 KAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESLISALELIVWEVEYGNEHEQLR 638
           K+M   G  K   CSW+ I+ H + F      H R + + S L++++ E+    +H ++ 
Sbjct: 620 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIG 679

BLAST of CmaCh04G024110 vs. TAIR10
Match: AT3G53360.1 (AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 330.5 bits (846), Expect = 2.6e-90
Identity = 183/607 (30.15%), Postives = 313/607 (51.57%), Query Frame = 1

Query: 19  YSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQLYALFGPVHEFFRVFGDIK 78
           +  +I  C +SS V + K +HAQ++KL  +++    N  + +Y                 
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV---------------- 230

Query: 79  EKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFLE 138
                          RF  +  A  +F  +P +D++SW+ +++G    GF  +A+    E
Sbjct: 231 ---------------RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 290

Query: 139 MQDAG-FRPSEYTFSILLSVVSC---PSHGKQIHGSMIRSGIDVSNVVLGNSLIDMYGKF 198
           M   G F P+EY F   L   S    P +G QIHG  I+S +   N + G SL DMY + 
Sbjct: 291 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARC 350

Query: 199 GLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVSIMI 258
           G ++    +F  +E+ D  SWN +I G   +G+   A++ F  MR++G  PD  ++  ++
Sbjct: 351 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 410

Query: 259 SLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEE-TNQWDQ 318
              +    L  G Q   +  K GF ++  V ++ + +++ C+ L     LFE+  N  D 
Sbjct: 411 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 470

Query: 319 ALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNL 378
              + ++++   H    + + LF   L     P  IT+ ++L      + L LGSQ+H  
Sbjct: 471 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 530

Query: 379 VLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEA 438
            LK G   +  + + L+DMYAK G +  A ++F  M +RD++SW+T+I+G   +G   EA
Sbjct: 531 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 590

Query: 439 LGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTCVVD 498
           L   K +   G+  + +T  GVL AC H G V+EGL +++TM+ EHG+ PT EH +CVVD
Sbjct: 591 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 650

Query: 499 LLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAERVMKLEPQLSLP 558
           LL+RAG+  EA   I++M  +P    W +LL AC   G++++ ++ AE ++K++P  S  
Sbjct: 651 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 710

Query: 559 YSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLRGESL 618
           + +L   +A+ G WE+   +R +M+    +K+   SW+ I+D ++ F  + + H   + +
Sbjct: 711 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 745

Query: 619 ISALELI 621
            + L  I
Sbjct: 771 YTVLHNI 745

BLAST of CmaCh04G024110 vs. TAIR10
Match: AT3G02010.1 (AT3G02010.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-85
Identity = 177/567 (31.22%), Postives = 303/567 (53.44%), Query Frame = 1

Query: 65  GPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCV 124
           G VH F    G      +   N+ LK       +D A  LF+E+PE+D V++N +++G  
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226

Query: 125 SSGFANKAMDVFLEMQDAGFRPSEYTFS-ILLSVVSCPSH--GKQIHGSMIRSGIDVSNV 184
             G   +++ +FL+M+ +G +PS++TFS +L +VV       G+Q+H   + +G    + 
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDA 286

Query: 185 VLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRAT 244
            +GN ++D Y K   V    ++F  M ++D +S+N +I    ++     +L+ F  M+  
Sbjct: 287 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 346

Query: 245 GHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSI--VLSAAIDLFSKCNSLR 304
           G     F  + M+S+ + L  L++G+Q    C  +  T++SI  V ++ +D+++KC    
Sbjct: 347 GFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFE 406

Query: 305 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 364
           +A  +F+   Q       A+IS     G     + LF      NLR    T ++VL + +
Sbjct: 407 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 466

Query: 365 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 424
            F  L LG Q+H  +++ G   +    S LVDMYAK G I +A++VF +MP R+ +SWN 
Sbjct: 467 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 526

Query: 425 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 484
           +I    +NG    A+G    +++ G+  D +++ GVL AC H GFV++G   F  M   +
Sbjct: 527 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 586

Query: 485 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 544
           G+ P  +HY C++DLL R G+F EA  ++++M  +P    W S+L+AC IH + ++ ER 
Sbjct: 587 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 646

Query: 545 AERVMKLEP-QLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVY 604
           AE++  +E  + +  Y  ++  YAA G WE    V+KAM   G +KV A SWV +   ++
Sbjct: 647 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 706

Query: 605 AFQDDRLQHLRGESLISALELIVWEVE 626
            F  +   H  G+ ++  +  +  E+E
Sbjct: 707 VFSSNDQTHPNGDEIVRKINELTAEIE 730

BLAST of CmaCh04G024110 vs. TAIR10
Match: AT1G56570.1 (AT1G56570.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 309.3 bits (791), Expect = 6.1e-84
Identity = 174/554 (31.41%), Postives = 307/554 (55.42%), Query Frame = 1

Query: 78  KEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMMSGCVSSGFANKAMDVFL 137
           K+ +I++ N+ +   F  G V+ AR+LFDEMP+RD+V+W  M++G  SS +  +A + F 
Sbjct: 42  KKHHILATNLIVS-YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 101

Query: 138 EMQDAGFRPSEYTFSILLSVVSCPS-----HGKQIHGSMIRSGIDVSNVVLGNSLIDMYG 197
           EM   G  P+E+T S +L   SC +     +G  +HG +++ G++ S + + N++++MY 
Sbjct: 102 EMVKQGTSPNEFTLSSVLK--SCRNMKVLAYGALVHGVVVKLGMEGS-LYVDNAMMNMYA 161

Query: 198 KFGL-VDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRATGHSPDQFTVS 257
              + ++   ++F  ++  + ++W +LI G    G  +  L  +  M         + ++
Sbjct: 162 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 221

Query: 258 IMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRDAAQLFEETNQW 317
           I +   + +  +  GKQ      K GF SN  V+++ +DL+ +C  L +A   F E    
Sbjct: 222 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 281

Query: 318 DQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIH 377
           D    + +IS L       +++ +F     +   P   T +S++++ +    L+ G Q+H
Sbjct: 282 DLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 341

Query: 378 NLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSR-DLISWNTMIMGLVNNGKY 437
             + + GF  +  ++++L+DMYAK G I ++ +VF ++  R +L+SW +M++G  ++G  
Sbjct: 342 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 401

Query: 438 FEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHGVVPTNEHYTC 497
            EA+     +V  G+  DRI    VL ACRHAG V++GL  F+ ME+E+G+ P  + Y C
Sbjct: 402 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNC 461

Query: 498 VVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVAER-VMKLEPQ 557
           VVDLL RAGK  EA  ++E+M  +P  + W ++L AC  H    +I R+A R VM+L+P+
Sbjct: 462 VVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK 521

Query: 558 LSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAFQDDRLQHLR 617
           +   Y +L+  YAA G+W    RVRK M  +G +K    SW+++++ V++F         
Sbjct: 522 MVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPN 581

Query: 618 GESLISALELIVWE 624
             S+ S L L++ E
Sbjct: 582 ASSVYSVLGLLIEE 590

BLAST of CmaCh04G024110 vs. NCBI nr
Match: gi|449453105|ref|XP_004144299.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 986.9 bits (2550), Expect = 1.9e-284
Identity = 487/632 (77.06%), Postives = 540/632 (85.44%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH  L  L GAH+A  SHYS LI +CL   SVH AKTIH QLLKLGL++NTFL NRCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQL 60

Query: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
           YALFGPVH+  +VF  IK+KNI+SWNICLKG+FRFG VDGAR+LFD MPERDIVSWN M+
Sbjct: 61  YALFGPVHDVLKVFDGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
           SG VSSGF N AM V LEMQ+AGFRPSEYTFSILLS+VS   HGKQ+HGSMIRSG+DVS+
Sbjct: 121 SGYVSSGFGNSAMGVSLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
           +VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
           T HSPDQFT+S++IS+C  LQELELGKQ   FCFKMGFTSNSIVLSA IDLFSKC+SL+ 
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           A QLFE+TNQWD  LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSSISV
Sbjct: 301 AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISV 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           FTP++LGSQIHNLVLKLGF+SD +V+SSLVDMYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLAC +AG V+EGL IFS M  EHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
           VVP NEHY+CVV+LLSRAGKFEEAVNII+    QPTSTFW SLL  CAIHGDL +IE+VA
Sbjct: 481 VVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
           E +MKLEPQ SLPYSVLA+AYA R +WES VRV+K  ENI  QKVKACSW+V KD+ YAF
Sbjct: 541 EWMMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAF 600

Query: 601 QDDRLQHLRGESLISALELIVWEVEYGNEHEQ 633
           QDD+LQ L  E++IS LELI+WE+EYG +HEQ
Sbjct: 601 QDDQLQLLSRENIISVLELIIWEIEYGIDHEQ 632

BLAST of CmaCh04G024110 vs. NCBI nr
Match: gi|659081917|ref|XP_008441575.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 974.9 bits (2519), Expect = 7.4e-281
Identity = 482/632 (76.27%), Postives = 536/632 (84.81%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH  L  L GAH+A  SHYS LI QCL   SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120
           Y LFGPVH+  + F  IK+KNI+SWNICLKG+FRFG VD  R+LFD MPERDIVSWN M+
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180
           SG VSSGFA  AM + LEMQ+AGFRPSEYTFSILLS+VS   HGKQ+HGSMIRSG+DVS+
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240
           +VLGNSLIDMYGK GLVDYMFV+F SMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300
           T HSPDQFT+S++IS+C  LQELELGKQ   FC KMGFTSNSIVLSA IDLFSKC+SL+ 
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360
           A QLFE+TNQ D+ LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360

Query: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420
           FTP++LGSQIHNLVLKLGFE D +V+SSLVDMYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLAC +AGFV+EGL IFSTM  EHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480

Query: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540
           VVP+NEHY+CVV+LLSRAGKFEEAVNII+    QPTSTFW SLL  CAIHGDL +IE+VA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

Query: 541 ERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYAF 600
           E VMKLEPQ SLPYSVLA+AYA R +WES VRV+   ENI AQKVKACSW+V KD  YAF
Sbjct: 541 EWVMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF 600

Query: 601 QDDRLQHLRGESLISALELIVWEVEYGNEHEQ 633
           +DD+LQ L  E+ IS LELI+WE+EYG ++EQ
Sbjct: 601 EDDQLQLLLRENFISVLELIIWEIEYGIDYEQ 632

BLAST of CmaCh04G024110 vs. NCBI nr
Match: gi|694430780|ref|XP_009342851.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 757.3 bits (1954), Expect = 2.4e-215
Identity = 370/626 (59.11%), Postives = 474/626 (75.72%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH   K L G H+ S S+YS LID CL+  SV+I K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1   MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNIVKIIHAQLIKVGFNSHTFLGNRCLDV 60

Query: 61  YALFGP-VHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCM 120
           Y  FG  +H+  +V+ +I EKN+VSWNICLKGL RFG +  AR++F EMPERD+VSWN M
Sbjct: 61  YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLSRFGEIQKARHMFAEMPERDVVSWNSM 120

Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVS 180
           +SG VS GF + A+++F +MQ AG RPSEYTFSI++++V+   +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180

Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 240
           NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+  LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240

Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLR 300
           AT ++PD+FT+S +I++C  L +LE GKQ   FCFK+GF SNSIV SAAIDL SKCN L 
Sbjct: 241 ATEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300

Query: 301 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
           DA +LFEE + WD A+C++MISS A HG   D + LFV  LRENLRPT  TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDVVQLFVLTLRENLRPTEFTLSSMLSSVS 360

Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
           +F P + GSQIH+LV+KLGFESD +V+SSLVD+Y+K GL++ AMK+F++M  +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420

Query: 421 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
           +IMGL +NGK FE L   K LV +G   D +TLAGVLLAC   GF++EG+ IF T+E E+
Sbjct: 421 IIMGLAHNGKVFETLSIFKELVSKGTAPDNLTLAGVLLACNFGGFIEEGMTIFLTIEKEY 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
           G+VP  EHY  +VDLL RAGK  EA++++  M  +  S  W S+L AC IHGD  + ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540

Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
           A+R+MKL PQ SLPY VLARAY  RG+WES + VRKAM   G + V  CSW+ I++HVY 
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600

Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
           F  ++LQ  RG+ +   L L+  E+E
Sbjct: 601 FNAEQLQPPRGKDIYLILRLLSSEME 626

BLAST of CmaCh04G024110 vs. NCBI nr
Match: gi|645264661|ref|XP_008237784.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Prunus mume])

HSP 1 Score: 755.4 bits (1949), Expect = 9.2e-215
Identity = 364/626 (58.15%), Postives = 471/626 (75.24%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH   K   G H+ S S+YS+LID CL+  S++ AK IHAQL+K+G N++TFLGNRCL +
Sbjct: 1   MHSFSKQFHGLHKTSLSYYSHLIDHCLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDV 60

Query: 61  YALFG-PVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCM 120
           Y  FG  +++  +VF +I +KNIVSWNICLKG  RFG +  A N+F EMP RD+VSWN M
Sbjct: 61  YFRFGNTLYDALKVFDEITDKNIVSWNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSM 120

Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVS 180
           +SGCVS GF + A  +F +MQ AG RPSEYTFSI+ S+V+C  HGKQIHG MIR+G+++S
Sbjct: 121 ISGCVSGGFFDNAFCLFSKMQIAGMRPSEYTFSIVTSLVTCSCHGKQIHGGMIRNGMNLS 180

Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 240
           N++LGNSLIDMYGK G VDY F +F++ME+VD+ISWNSLI GCHRSG+  LAL+QFF MR
Sbjct: 181 NLILGNSLIDMYGKLGCVDYAFGVFFAMEEVDIISWNSLISGCHRSGYAELALDQFFQMR 240

Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLR 300
           +T HSPD+FT+S +I++C  L  LE GKQ   FC K+GF SNSIV SAAIDLFSKCN L 
Sbjct: 241 STKHSPDEFTISSVINVCCNLPNLEKGKQIFAFCLKVGFLSNSIVSSAAIDLFSKCNRLE 300

Query: 301 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
           DA +LFEE + WD A+C++MISS A H    D++ LFV  LRENLRPT  TLSS+L+S  
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYARHDCVEDAVQLFVLTLRENLRPTEFTLSSLLNSAP 360

Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
           +F P +LGSQ+H+LV+KLGFESD +V+SSL+D Y+KVGLID AMK+F ++  +DL SWNT
Sbjct: 361 IFLPAELGSQMHSLVVKLGFESDPIVASSLIDFYSKVGLIDYAMKIFANVGVKDLTSWNT 420

Query: 421 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
           MIMG+ +NGK FEAL   + L+ EG+  D++TLAGVL AC   G VDEG+ +F +M  E+
Sbjct: 421 MIMGMAHNGKVFEALNIFEELISEGIAPDKLTLAGVLFACNLGGLVDEGMTMFLSMGEEY 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
           G+VP +EHY  +VDLLS  GK +EA++I+ +M  +P+S  W S+L AC IHGD  + E V
Sbjct: 481 GIVPQDEHYMSIVDLLSSTGKLKEAIDIVAEMPYEPSSMIWESILRACVIHGDFKLTETV 540

Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
           A+R+M+ E Q SLPY VLARAY  RGRWES +RVRKAM+  G + V  CS + I++HVY 
Sbjct: 541 AQRMMQSEAQSSLPYLVLARAYEMRGRWESMIRVRKAMKLKGVRNVIGCSKIGIQNHVYT 600

Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
           F+ D+LQ  RG+ +   L L+ WE+E
Sbjct: 601 FKADQLQPHRGKDIYLILRLLCWEME 626

BLAST of CmaCh04G024110 vs. NCBI nr
Match: gi|694362310|ref|XP_009360668.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 754.6 bits (1947), Expect = 1.6e-214
Identity = 368/626 (58.79%), Postives = 471/626 (75.24%), Query Frame = 1

Query: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60
           MH   K L G H+ S S+YS LID CL+  SV+  K IHAQL+K+G N++TFLGNRCL +
Sbjct: 1   MHSYFKQLHGFHKTSLSYYSRLIDHCLSLKSVNFVKIIHAQLIKVGFNSHTFLGNRCLDV 60

Query: 61  YALFGP-VHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCM 120
           Y  FG  +H+  +V+ +I EKN+VSWNICLKGL RFG +  AR++F EMPERD+VSWN M
Sbjct: 61  YFRFGDTLHDALKVYDEITEKNLVSWNICLKGLGRFGEIQKARHMFAEMPERDVVSWNSM 120

Query: 121 MSGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVS 180
           +SG VS GF + A+++F +MQ AG RPSEYTFSI++++V+   +GKQIHG MIRSG+++S
Sbjct: 121 ISGYVSCGFIDNALEIFSQMQIAGVRPSEYTFSIMMTLVTSACYGKQIHGDMIRSGMNLS 180

Query: 181 NVVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR 240
           NVVLGNSLIDMYGK G VDY F +F++ME+VDVISWNSLI GCHRSG+  LAL+QFF MR
Sbjct: 181 NVVLGNSLIDMYGKLGCVDYAFGVFFTMEEVDVISWNSLISGCHRSGYEELALDQFFWMR 240

Query: 241 ATGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLR 300
            T ++PD+FT+S +I++C  L +LE GKQ   FCFK+GF SNSIV SAAIDL SKCN L 
Sbjct: 241 GTEYAPDEFTISTVINVCCNLLDLEKGKQTFAFCFKVGFFSNSIVSSAAIDLLSKCNRLE 300

Query: 301 DAAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSIS 360
           DA +LFEE + WD A+C++MISS A HG   D++ LFV  LRENLRPT  TLSS+LSS+S
Sbjct: 301 DAIRLFEELDWWDSAVCNSMISSYAQHGCGEDAVQLFVLTLRENLRPTEFTLSSMLSSVS 360

Query: 361 VFTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNT 420
           +F P + GSQIH+LV+KLGFESD +V+SSLVD+Y+K GL++ AMK+F++M  +DLI+WNT
Sbjct: 361 IFLPAEPGSQIHSLVVKLGFESDVIVASSLVDLYSKAGLVNYAMKIFSNMGVKDLITWNT 420

Query: 421 MIMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEH 480
           +IMGL +NGK FE L   K L  +G   D +TLAGVLLAC   GF++EG+ IF TME E+
Sbjct: 421 IIMGLAHNGKVFETLSIFKELASKGAAPDNLTLAGVLLACNFGGFIEEGMTIFLTMEKEY 480

Query: 481 GVVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERV 540
           G+VP  EHY  +VDLL RAGK  EA++++  M  +  S  W S+L AC IHGD  + ERV
Sbjct: 481 GIVPGEEHYAPIVDLLCRAGKLREAMDVLAAMPYEHGSVVWESILRACVIHGDFKLTERV 540

Query: 541 AERVMKLEPQLSLPYSVLARAYAARGRWESTVRVRKAMENIGAQKVKACSWVVIKDHVYA 600
           A+R+MKL PQ SLPY VLARAY  RG+WES + VRKAM   G + V  CSW+ I++HVY 
Sbjct: 541 AKRMMKLVPQSSLPYLVLARAYEMRGKWESMIWVRKAMILNGVKNVVGCSWIGIQNHVYT 600

Query: 601 FQDDRLQHLRGESLISALELIVWEVE 626
           F  + LQ  RG+ +   L L+  E+E
Sbjct: 601 FNAEELQPPRGKDIYLILRLLSSEME 626

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR73_ARATH8.7e-16546.63Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop... [more]
PP151_ARATH8.0e-11034.69Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP280_ARATH4.6e-8930.15Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
PP206_ARATH2.0e-8431.22Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
PP274_ARATH6.4e-8332.55Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
M5W3X4_PRUPE9.9e-20858.57Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014901mg PE=4 SV=1[more]
B9H7L3_POPTR5.8e-20055.04Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
A5C139_VITVI5.8e-20059.08Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018083 PE=4 SV=1[more]
A0A072V224_MEDTR2.7e-19755.20PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g088835 PE=4 SV... [more]
A0A0B2SRT0_GLYSO1.8e-19353.83Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... [more]
Match NameE-valueIdentityDescription
AT1G43980.14.2e-16547.12 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G13600.14.5e-11134.69 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53360.12.6e-9030.15 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02010.11.1e-8531.22 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G56570.16.1e-8431.41 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449453105|ref|XP_004144299.1|1.9e-28477.06PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ... [more]
gi|659081917|ref|XP_008441575.1|7.4e-28176.27PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ... [more]
gi|694430780|ref|XP_009342851.1|2.4e-21559.11PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-... [more]
gi|645264661|ref|XP_008237784.1|9.2e-21558.15PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ... [more]
gi|694362310|ref|XP_009360668.1|1.6e-21458.79PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G024110.1CmaCh04G024110.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 415..445
score: 3.2E-5coord: 185..209
score: 0.034coord: 487..511
score: 0.0029coord: 387..413
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 112..156
score: 6.7
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 114..148
score: 1.3E-8coord: 415..448
score: 1.5E-4coord: 488..512
score: 0.0017coord: 83..114
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 448..483
score: 6.851coord: 413..447
score: 9.81coord: 550..584
score: 7.037coord: 211..245
score: 8.89coord: 15..49
score: 5.437coord: 281..311
score: 6.138coord: 81..111
score: 9.262coord: 246..280
score: 5.404coord: 312..346
score: 8.298coord: 484..514
score: 7.837coord: 112..146
score: 12.529coord: 516..546
score: 5.251coord: 382..412
score: 8.572coord: 180..210
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 487..571
score: 9.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 262..550
score: 1.1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 73..591
score: 2.3E
NoneNo IPR availablePANTHERPTHR24015:SF613SUBFAMILY NOT NAMEDcoord: 73..591
score: 2.3E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G024110CmoCh04G025240Cucurbita moschata (Rifu)cmacmoB729
CmaCh04G024110Lsi08G005080Bottle gourd (USVL1VR-Ls)cmalsiB703
CmaCh04G024110Cp4.1LG01g20930Cucurbita pepo (Zucchini)cmacpeB721
CmaCh04G024110Cla97C08G149060Watermelon (97103) v2cmawmbB786
CmaCh04G024110Carg15758Silver-seed gourdcarcmaB0088
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G024110CmaCh15G006370Cucurbita maxima (Rimu)cmacmaB325