CmoCh04G024040 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G024040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionE3 ubiquitin-protein ligase (6.3.2.-)
LocationCmo_Chr04 : 17906023 .. 17909559 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAGTACACGTGGCGATCTTACTGATAACAATCTGCTTCCTCCTCGCAGGAGAAGCGGCGTCGAAATGGCGAAGTTTTCGGTGGGTGGAGAGGAAGACGGGGAGGACGGATCCAGTACCAGTAGCCCTAGGGCGAAGAGGAAGAGAACCTCCTTTCGCATCAACGCCGTCGTTAATTTTCCCCGGCACAACCAACGGTGTGAAGAAGGGGAAGAGCAGGGTTTCGATTACTGTAAGGAAGAAACTGCGAGCGATGAAGAGCAGAGAAAGCGCCATCGAATTGACGGAATAGAGGAACAGGTTGAAGAGGACGGTACCGAAAACGCACTCTGCTCGGTTAAGTCCTGCTCTAGAAATGTGAAGGAAAATGGCTCCATTTCGATGTTTTTGATCGACCCTGAAGTGTTGGATTGTTCCATTTGTTGTGAACCCTTGAGTGTCCCCATCTTCCAGGTATGTTGTTTTCAATAATCTCCGTCCTGGTTCTGTTCGTAATTAGTTGTGATTTTGTAGTTGACTTTGCTCTGATTCCAAATTGGCTTTTCGTTTGGGGGTTTTCCATAAAGATCAGATAGATCCCAAAATTGAGTTGGGTTGGATTTCGTTCGATTGAACCTTTAATCAAATAAGATGAAATGGAAGCCATTAGTAGTTCGTTCGTCTTGTAAAAACTTAAGAACTGCTGGGTTGATATTTAGCAGAAGCGTTGATATCCTCAATAATCTTCTAGTAATTTAATGCATAATCTATGTATACGTGCTCTGTGTGAGGATGAACCAGATAGGTGGAGTATCATTTCTGTACAAATGTGAGGGTCAAGCAACAATCGATGAACCAAATATACCACCATAACAGTTATGGTTGAGAAACGGTACTCGACCTCATGGATGAATGAGAGATCGTTTGTTGCTTCTCAGACAATGAGATAGAACTGGAACTAAGAACACAACTCTGGAATAAAATCACTTATCAAGTGTGTCCACAAGCTGCTGATAATAGGATGGATCATTGAATGGAGGAGATTTGACCTGTAATTGAAGCTGAATTGACATTGGAGTTTCAAAGCGTTTTGCACCAGTCATGCCTGATTTTTCAAGCAATTAGGTTGATGAAGATATACACTAGAAAATGCTGTATGTATTTCAAGCCCAAGAAACTACTTGAGTTGGCCAGGATCAGAAATCTGAATTTCATAGGTTATTCACCCTTCAGAGTACTAATGGAGTGTTTTTTTAAGTGGGAGTGTTTAGTGATTTCAATAAAAATTGGCAGAGAGAAGGAAAGGTTGGATGGGAATTAGAAAGGAGCAACTTGAGGGTTGATGTTCTGAACAAGATGGATGAAAATCCTTAGCAAATGTGGTCAAAGGATTCATGGGATCAAGAACAGTGTGGATAAGGAATTCCAATGGAAAAATGAAGATGAAGAAAAGGATTGCTATTATGAGAGTTGAGTTTGCTAAAATTGATTGGCACGTACCATTGTGGTCAAGAGACCTCAGTTTCATCATGATTCGTTCACCATCGTTGTGGCACTAAGACAGGTGATCTATGAATATTTTATGTGAATCCTTTTGATGCAAAGGAAGCTTTGATTAGAGGAGTTAAGAAAATGGCTTGTACTTGTAAGATTGATGGATTGGCGGATATGAGGAGATTTTAAAGAAGGGGAAAATTTGTGGGGTTTTATTAACTGTTAACACGCTTGATTTCTTAGAAGCATATTTAGAGATAATAGGTAATTTTTGTGGGTTTATTCCAGCCAAATTTGAGATTTAACATCCAAGTGAACGGAGATTTGTCGTGCAAGCTGTGACCTAGCCATTCTTCGAAACTTTTGGCTAGTAGTGTGAGCAAAATTTCCAACAAAGTTGTTTGGATGATGTTGTTTAGAATGTTCATAACAACTTCATAGTATTGCTTGATTGAGATAGAAGTTGAAGATAAATTCAGCTACTTTGTTTTGCTGTTCAAGGGTTTTTTCTTTGACTTTAAATCATGCCCATAGGATCTTTCTTCGTGCGGTTAATGCACGGAAGAAAGTGTATTTAGTATGGAGGACATTAATAAGTGTATGAATAAGAATCTCCTCAGCCTCAATGTCATCTGAGACCAACTCATTCAACTGTAATTTCTGTAAGATCTTGAACATCTAAAATGTGAGATAATGAAGCTGACTGTTTTAGCAGATTGAAAATTTTCCTCGAAACAGAAAATCGAATAGATTCTTGCAGATGCATTCAACCCTTGTTATTAGTCGATGTAACAGTCTAGAAGGATTTGTATATAAGACTGCAGCTCTTATTGGTTTTTTTAATGTATGATTTGTGCATTAGAAGTAAAAGAAAGAAAAAAAAGTCTTCTCATAATTAAATTTCGATCGATCAGTTAACATATGCTTATTCCTGTTGAATTGTTCAGTTTTGGTGTAAACTGATTGCTCGTGCTCGCTCTTTAACCTCTGCTAATTATTTCAGCTATATTTCACATTTCTACTTGTGTTTCAATAGATAAAGTGGTCATACAGTCGGCACGAGCTAGACATGATCGTCTAACAATTAACTGTTTGGTTTTGTCATATCATCAATATATCAACAGTTTGACTAGATTTTTTTATCATGAATTCAGTGTGAGAATGGGCATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAGATGTGCAACCTGCTCTTGGCCTATCGGCTATAATCGTTGTCGGGCCGTCGAGAAGGTTCTTGAATCCATTAAACTACCCTGCAAACAATCAAAGTACGGATGCAAGGAGATGGTTAGTTATGGTAGTGAAAGTGACCACGAAAAGAAATGCCTACATGCCCCTTGTAAATGCCCTCTTCCTGATTGCAACTTTGTTGCCTCATCTAAGCAATTATCACTACATTTCAGCAGTAAACATACAGACTCTGCTATCAGCTTTCAGTTCAGTTCTAGCTTCACCATTTGCCTAAACGCTAACGATAATTACCGCGTTCTTCAAGAACAAGGTGATGGTATTCTTTTTATTCTCAGCAATAGTTTTGATCATCTGGGAAATGCTGTTAAAGTTTGCTGCCTTAGACCTCCTTCCTTGAAGGAAGCATTTTCTTATGATCTACGAGTAGAAACTCAAGATCTCTCCCTAGTTTTACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCCCTCGACGAGGTTCCTTTTGATTCCACGCGATTTGTTCAGTTCTTCAGGCATGATCAAGTTGAATATCTGCATATGGCAAAACACCGGTGCACCACCGTAGATAAAAGGCGTCGGTAAGTCAACAAGTAAATATCGTGCTGTTTATATAAATGTATATGTCAGTGTGCATATTGTGTACATGTCATGGAAAATAAGGTCAGTCTTAGAAGCTCAGTTATGCTGCATAATTTGTATATAGCAGCAGTTTCCGATTTCGTAAGTTTATTCTAACTCGTTCGGTCCATGGTCTGGGAACTCGGTTGTGTTATATTACCACTACTTAAATGAACTCTTTCAGATGGACC

mRNA sequence

TGTAGTACACGTGGCGATCTTACTGATAACAATCTGCTTCCTCCTCGCAGGAGAAGCGGCGTCGAAATGGCGAAGTTTTCGGTGGGTGGAGAGGAAGACGGGGAGGACGGATCCAGTACCAGTAGCCCTAGGGCGAAGAGGAAGAGAACCTCCTTTCGCATCAACGCCGTCGTTAATTTTCCCCGGCACAACCAACGGTGTGAAGAAGGGGAAGAGCAGGGTTTCGATTACTGTAAGGAAGAAACTGCGAGCGATGAAGAGCAGAGAAAGCGCCATCGAATTGACGGAATAGAGGAACAGGTTGAAGAGGACGGTACCGAAAACGCACTCTGCTCGGTTAAGTCCTGCTCTAGAAATGTGAAGGAAAATGGCTCCATTTCGATGTTTTTGATCGACCCTGAAGTGTTGGATTGTTCCATTTGTTGTGAACCCTTGAGTGTCCCCATCTTCCAGTGTGAGAATGGGCATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAGATGTGCAACCTGCTCTTGGCCTATCGGCTATAATCGTTGTCGGGCCGTCGAGAAGGTTCTTGAATCCATTAAACTACCCTGCAAACAATCAAAGTACGGATGCAAGGAGATGGTTAGTTATGGTAGTGAAAGTGACCACGAAAAGAAATGCCTACATGCCCCTTGTAAATGCCCTCTTCCTGATTGCAACTTTGTTGCCTCATCTAAGCAATTATCACTACATTTCAGCAGTAAACATACAGACTCTGCTATCAGCTTTCAGTTCAGTTCTAGCTTCACCATTTGCCTAAACGCTAACGATAATTACCGCGTTCTTCAAGAACAAGGTGATGGTATTCTTTTTATTCTCAGCAATAGTTTTGATCATCTGGGAAATGCTGTTAAAGTTTGCTGCCTTAGACCTCCTTCCTTGAAGGAAGCATTTTCTTATGATCTACGAGTAGAAACTCAAGATCTCTCCCTAGTTTTACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCCCTCGACGAGGTTCCTTTTGATTCCACGCGATTTGTTCAGTTCTTCAGGCATGATCAAGTTGAATATCTGCATATGGCAAAACACCGGTGCACCACCGTAGATAAAAGGCGTCGGTAAGTCAACAAGTAAATATCGTGCTGTTTATATAAATGTATATGTCAGTGTGCATATTGTGTACATGTCATGGAAAATAAGGTCAGTCTTAGAAGCTCAGTTATGCTGCATAATTTGTATATAGCAGCAGTTTCCGATTTCGTAAGTTTATTCTAACTCGTTCGGTCCATGGTCTGGGAACTCGGTTGTGTTATATTACCACTACTTAAATGAACTCTTTCAGATGGACC

Coding sequence (CDS)

ATGGCGAAGTTTTCGGTGGGTGGAGAGGAAGACGGGGAGGACGGATCCAGTACCAGTAGCCCTAGGGCGAAGAGGAAGAGAACCTCCTTTCGCATCAACGCCGTCGTTAATTTTCCCCGGCACAACCAACGGTGTGAAGAAGGGGAAGAGCAGGGTTTCGATTACTGTAAGGAAGAAACTGCGAGCGATGAAGAGCAGAGAAAGCGCCATCGAATTGACGGAATAGAGGAACAGGTTGAAGAGGACGGTACCGAAAACGCACTCTGCTCGGTTAAGTCCTGCTCTAGAAATGTGAAGGAAAATGGCTCCATTTCGATGTTTTTGATCGACCCTGAAGTGTTGGATTGTTCCATTTGTTGTGAACCCTTGAGTGTCCCCATCTTCCAGTGTGAGAATGGGCATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAGATGTGCAACCTGCTCTTGGCCTATCGGCTATAATCGTTGTCGGGCCGTCGAGAAGGTTCTTGAATCCATTAAACTACCCTGCAAACAATCAAAGTACGGATGCAAGGAGATGGTTAGTTATGGTAGTGAAAGTGACCACGAAAAGAAATGCCTACATGCCCCTTGTAAATGCCCTCTTCCTGATTGCAACTTTGTTGCCTCATCTAAGCAATTATCACTACATTTCAGCAGTAAACATACAGACTCTGCTATCAGCTTTCAGTTCAGTTCTAGCTTCACCATTTGCCTAAACGCTAACGATAATTACCGCGTTCTTCAAGAACAAGGTGATGGTATTCTTTTTATTCTCAGCAATAGTTTTGATCATCTGGGAAATGCTGTTAAAGTTTGCTGCCTTAGACCTCCTTCCTTGAAGGAAGCATTTTCTTATGATCTACGAGTAGAAACTCAAGATCTCTCCCTAGTTTTACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCCCTCGACGAGGTTCCTTTTGATTCCACGCGATTTGTTCAGTTCTTCAGGCATGATCAAGTTGAATATCTGCATATGGCAAAACACCGGTGCACCACCGTAG
Homology
[Close]
BLAST of CmoCh04G024040 vs. Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.5e-56
Identity = 133/349 (38.11%), Postives = 190/349 (54.44%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MA+FSV G +DGE  S+ +    KR+R    I+        +     GEE   +   +  
Sbjct: 1   MARFSVCGGDDGEGPSNNNHQSRKRQRLP-SIDENEEDAETSDAGSSGEEDEDETQNQGM 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
             + E R     D   E V E+        V S S +  ++  +S+ L+DP+VLDC ICC
Sbjct: 61  RPESEDRGSTSDDSDREVVIEERRFGKF--VNSQSSSSSKDSPLSVTLLDPDVLDCPICC 120

Query: 121 EPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYG 180
           EPL +PIFQC+NGH+AC+ CC K++NRC +C+ PIGY RCRA+EKV+E+ ++ C  +KYG
Sbjct: 121 EPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYG 180

Query: 181 CKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFT 240
           CKE  SYG+   HE+ C+  PC CP+ DC++    K L+ H  ++H D  ISF +++  T
Sbjct: 181 CKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLT 240

Query: 241 ICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVETQD 300
           I L+ N    +LQE+ DG + ++          V V C+ P  P +    S  L   T D
Sbjct: 241 ISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGR-LSCRLAKITVD 300

Query: 301 LSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQNTG 348
             L     +KNIQ  ++  P   F+LIP  LF  SG   LN+ IW   G
Sbjct: 301 SLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF--SGNDNLNLQIWIGHG 343

[Close]
BLAST of CmoCh04G024040 vs. Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.4e-44
Identity = 96/246 (39.02%), Postives = 137/246 (55.69%), Query Frame = 1 

Query: 88  LCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNR 147
           L S  +  R+ K+    S  L+D E+LDC IC E  ++PIFQC+NGH+ACSSCC KL N+
Sbjct: 26  LSSSDAAKRDAKKR---STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNK 85

Query: 148 CATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLP 207
           C  C+ P+G+NRCRA+E VLESI +PC  +K GCK+ VSYG E  HEK+C+ + C CP  
Sbjct: 86  CPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPAL 145

Query: 208 DCNFVASSKQLSLHFSSKHTD--SAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSN 267
           DCN+ +S K L  H+   H +     +F      ++ +N +    +  E     LF +  
Sbjct: 146 DCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQC 205

Query: 268 SFDHLGNAVKVCCLRPPSLK-EAFSYDLRVETQDLSLVLQS-SMKNIQSSSDCCPSTRFL 327
             +  G  V V C+ P S +   +SY L       +++ QS  +K +   S   P   F+
Sbjct: 206 FREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFM 265

Query: 328 LIPRDL 330
           LIP  L
Sbjct: 266 LIPNSL 268

[Close]
BLAST of CmoCh04G024040 vs. Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-42
Identity = 95/270 (35.19%), Postives = 151/270 (55.93%), Query Frame = 1 

Query: 80  EEDGTENALCS-VKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACS 139
           E +G++   CS + S     + + + S  L D ++LDC IC + L +P+FQC NGH+ACS
Sbjct: 8   ERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLACS 67

Query: 140 SCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCL 199
           SCC KL+N+C  C+ P+G+ RCRA+E+VLES+ +PC+ +  GC + + YG ES HEK C 
Sbjct: 68  SCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICN 127

Query: 200 HAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFS--SSFTICLNANDNYRVLQEQG 259
            +PC CP+  CN+  S K L  H+   H+  + ++ F+  S     +  +D   + +   
Sbjct: 128 FSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVYE 187

Query: 260 DGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVET-QDLSLVLQS-SMKNIQS 319
             +LF++    +  G  V V C+ P  P + E FSY L   T + +++  QS  +K +  
Sbjct: 188 KKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGE-FSYGLLYTTWEGVTMTYQSPKVKKVLK 247

Query: 320 SSDCCPSTRFLLIPRDLFSSSGMIKLNICI 343
            S   P   F+LIP  L     ++ + +CI
Sbjct: 248 VSSQRPKDSFMLIPHSLLCGP-LLGMMLCI 275

[Close]
BLAST of CmoCh04G024040 vs. Swiss-Prot
Match: SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 90/266 (33.83%), Postives = 141/266 (53.01%), Query Frame = 1 

Query: 87  ALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKN 146
           AL S       V +    ++ L+D ++LDC ICCE L+ PIFQC+NGH+AC SCC KL N
Sbjct: 9   ALISQGDGGERVAKRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSN 68

Query: 147 RCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPL 206
           +C  C+ P+G++R RA+E VLESI +PC   ++GC +   YG ES HEK+C+ + C CP 
Sbjct: 69  KCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPS 128

Query: 207 PDCNFVASSKQLSLHFSSKHTDSAI----SFQFSSSFTICLNANDNYRVLQEQGDGILFI 266
             C++  S K L  H+   H+ +       F+ ++ FT  +  +D   + +     +L  
Sbjct: 129 SVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLA 188

Query: 267 LSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVETQDLSLVLQS-SMKNIQSSSDCCPS 326
           +    +  G  V V  + P  P + E FSY L       ++  +S  +K +   S   P 
Sbjct: 189 VQCFREPCGVYVTVSFIAPSAPEVGE-FSYQLSYNVDGHTVTYESPEVKRVCKVSIETPQ 248

Query: 327 TRFLLIPRDLFSSSGMIKLNICIWQN 346
             F+LIP  L     ++++ + I +N
Sbjct: 249 ENFMLIPHSLLRGD-LLEMQVFIIEN 272

[Close]
BLAST of CmoCh04G024040 vs. Swiss-Prot
Match: SINL2_ARATH (E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana GN=At1g66620 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.1e-39
Identity = 100/282 (35.46%), Postives = 138/282 (48.94%), Query Frame = 1 

Query: 66  QRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSV 125
           +RKR R+    E VE  G +            V  +G+    L + ++LDC ICC  L+ 
Sbjct: 9   RRKRQRVPSSVESVENGGGDA-----------VARSGT----LFELDLLDCPICCHALTS 68

Query: 126 PIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMV 185
           PIFQC+NGHIACSSCC KL+N+C +C+ PIG  R R +E+V+E++ + C   K+GC E  
Sbjct: 69  PIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKF 128

Query: 186 SYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICLNA 245
           SYG E  HEK C  A C CP P+CN+    K L  HF   H D+       +     L  
Sbjct: 129 SYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDTWNQIGCGNFAGAWLRI 188

Query: 246 NDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKE---AFSYDLRVETQDLS 305
           ++   VLQ  G G L  +    +  G  V V C+ P  P + E     SY + +      
Sbjct: 189 SEKILVLQ-YGQGPLIAVQCFKETQGMYVTVNCIAPCAPGVGELSFELSYKMPMGGNSTM 248

Query: 306 LVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 343
           +     M  IQ  S   P   F+L+P         +K+ ICI
Sbjct: 249 MFKSEEMNRIQKVSFQTPEKDFMLVPYYFLGDFSTLKMEICI 274

[Close]
BLAST of CmoCh04G024040 vs. TrEMBL
Match: W9S0Z7_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 7.6e-76
Identity = 164/364 (45.05%), Postives = 222/364 (60.99%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSS---PRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCK 60
           MAKFS+ G+E+ ++G S  +   PR     T F  +     PR  +  EE ++   D   
Sbjct: 1   MAKFSLLGDEEDDEGPSCPALKRPRFDYAATPFSSDEDNEPPRRQEEQEEDDDVQID--- 60

Query: 61  EETASDEEQRKRHRIDGIEEQVEEDGT--ENALCSVKSCSRNVKENG----------SIS 120
               +D+      R+ G  E + EDG   EN+  +V S S +  +            SIS
Sbjct: 61  --GENDDFIITSPRLRG--EWITEDGAGEENSELNVDSISADANQEDPRPLSTNSDRSIS 120

Query: 121 MFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEK 180
           +FL DP+VLDC IC E L+VP+FQCENGHIACSSCC KL N+C +CSWPIGYNRCRA+EK
Sbjct: 121 VFLTDPDVLDCCICFEALTVPVFQCENGHIACSSCCTKLGNKCPSCSWPIGYNRCRAIEK 180

Query: 181 VLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSK 240
           VLES+K+ C+  +YGCKEMVSY    DHE  C HAPC CPL  CNF++S+KQL  HF S+
Sbjct: 181 VLESVKIACQNKQYGCKEMVSYSEIKDHETTCTHAPCSCPLTSCNFISSAKQLYQHFRSQ 240

Query: 241 HTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLK 300
           H DSA+ FQ++  FT+ LN  D + VLQE+  G LFIL+N  + LGN V V C+ P S  
Sbjct: 241 HADSAVLFQYNCDFTVTLNEGDKFLVLQERDGGGLFILNNETETLGNLVSVSCIGPYSFG 300

Query: 301 EAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQN 350
           +++ Y+L  +    +L L+S     Q  +D   S+ +LLIP   F SSG +KL++ I ++
Sbjct: 301 KSY-YNLLAKCDGNTLRLESFATCTQGQADYSLSSVYLLIPPGFFGSSGQLKLDLFIERH 356

[Close]
BLAST of CmoCh04G024040 vs. TrEMBL
Match: B9T323_RICCO (E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_0326980 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.1e-74
Identity = 161/360 (44.72%), Postives = 217/360 (60.28%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRT-SFRINAVVNFPRHNQRCEE-------GEEQG 60
           MA+FSV GE D       SSPR KR+R+ + +  A    P+   + EE        ++  
Sbjct: 1   MARFSVDGEAD----EGPSSPRRKRRRSQNSQQQASWRQPQEVVQDEEILEDESDNDDDD 60

Query: 61  FDYCKEETASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNV--KENGSISMFLID 120
            D  +EE +S+EE+      +  E +  ++ T+ A+      S  V    N +I + L D
Sbjct: 61  DDEEEEEESSEEEEEDDDDDEEDEAEGLDENTQMAIVEPPRSSNPVGTARNAAICVTLTD 120

Query: 121 PEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESI 180
           PEVLDC IC E LS+P+FQCENGH ACSSCC KL ++C +CS PIGYNRCRA+EKVLES+
Sbjct: 121 PEVLDCPICYECLSIPVFQCENGHTACSSCCRKLAHKCPSCSLPIGYNRCRAIEKVLESV 180

Query: 181 KLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSA 240
           KLPC   KYGCKEMVSY  + DH+K C +APC CPL  C+FV SS+QL  HFS KH  SA
Sbjct: 181 KLPCHNLKYGCKEMVSYSKKLDHDKICNNAPCSCPLSGCSFVGSSRQLYQHFSIKHKGSA 240

Query: 241 ISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSY 300
             F+++ +F +    ND   +LQE+ +G++F L N+ + LGN + V CL  PS K  + Y
Sbjct: 241 APFRYNITFPVFFTLNDKSLILQEEKEGVVFFLKNTAEILGNVITVNCLGGPSSKGGYFY 300

Query: 301 DLRVETQDLSLVLQSSMKNIQSSSDCCP-STRFLLIPRDLFSSSGMIKLNICIWQNTGAP 350
           +L    +  +L  QS  KNIQ  +   P S  FL+IP   F S G I L++CIW++   P
Sbjct: 301 ELAARMEGSNLKFQSFTKNIQKVNHDDPHSDTFLIIPGSFFGSYGQISLDLCIWRHGTYP 356

[Close]
BLAST of CmoCh04G024040 vs. TrEMBL
Match: A0A067FAH4_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.7e-72
Identity = 160/343 (46.65%), Postives = 210/343 (61.22%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVG  E+GE G S +S R +R        A    P+ N R  +GEE+     +EET
Sbjct: 1   MAKFSVGRLEEGE-GPSGNSKRQRR--------APHRHPQTNLR--DGEEE-----EEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGT-ENALCSVKSCSRNVKENGSISMFLIDPEVLDCSIC 120
              EE          +E V+  G  E A   +   SRN    G  S+ + DPEV DC IC
Sbjct: 61  HHQEED---------DESVDNGGNGEKADLDLAGPSRN----GPFSVTVTDPEVFDCPIC 120

Query: 121 CEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKY 180
            E L+ P+FQCENGHIACS+CC+K+ N+C +C  PIGYNRCRA+EKVLES+K+ C+ S Y
Sbjct: 121 YESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNY 180

Query: 181 GCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSF 240
           GCK  +SYG + DHEK C H PC CP+PDCNFV S+  L  HFS+KH +SA+ F ++   
Sbjct: 181 GCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVV 240

Query: 241 TICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDLRVETQDL 300
            + LN  + + VLQE+GDG+LFILS+  + LG+ + V C+  PS K    Y +       
Sbjct: 241 EVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCI-APSCKGCLFYSIFAGPAGS 300

Query: 301 SLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 343
           ++  QS  KNIQ+  D  PST FLL+P + F SSG +KL +CI
Sbjct: 301 TVRFQSFTKNIQNRVDNPPSTGFLLVPIESFGSSGDLKLELCI 313

[Close]
BLAST of CmoCh04G024040 vs. TrEMBL
Match: V4UW18_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.7e-72
Identity = 160/343 (46.65%), Postives = 210/343 (61.22%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVG  E+GE G S +S R +R        A    P+ N R  +GEE+     +EET
Sbjct: 1   MAKFSVGRLEEGE-GPSGNSKRQRR--------APHRHPQTNLR--DGEEE-----EEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGT-ENALCSVKSCSRNVKENGSISMFLIDPEVLDCSIC 120
              EE          +E V+  G  E A   +   SRN    G  S+ + DPEV DC IC
Sbjct: 61  HHQEED---------DESVDNGGNGEKADLDLAGPSRN----GPFSVTVTDPEVFDCPIC 120

Query: 121 CEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKY 180
            E L+ P+FQCENGHIACS+CC+K+ N+C +C  PIGYNRCRA+EKVLES+K+ C+ S Y
Sbjct: 121 YESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNY 180

Query: 181 GCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSF 240
           GCK  +SYG + DHEK C H PC CP+PDCNFV S+  L  HFS+KH +SA+ F ++   
Sbjct: 181 GCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVV 240

Query: 241 TICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDLRVETQDL 300
            + LN  + + VLQE+GDG+LFILS+  + LG+ + V C+  PS K    Y +       
Sbjct: 241 EVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCI-APSCKGCLFYSIFAGPAGS 300

Query: 301 SLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 343
           ++  QS  KNIQ+  D  PST FLL+P + F SSG +KL +CI
Sbjct: 301 TVRFQSFTKNIQNRVDNPPSTGFLLVPIESFGSSGDLKLELCI 313

[Close]
BLAST of CmoCh04G024040 vs. TrEMBL
Match: A0A067JT13_JATCU (E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_02506 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.5e-71
Identity = 151/365 (41.37%), Postives = 220/365 (60.27%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MA+FSVG +E        S P+ +R   S +  +       +Q  +E +++  +  +EE 
Sbjct: 1   MARFSVGVDE------GPSLPKRQRIHESSQQTS------WHQPQDEEDDEPLNESEEED 60

Query: 61  ASDEEQRKRHR---------IDGIEEQVEEDGTENALCSVKSCSRNVK------ENGSIS 120
             DEE+ +             D  +E+ EE+ TE  + + +    NV+       NG I 
Sbjct: 61  DDDEEEEEEEEGEEGDEGDDDDDDDEEQEEETTE--VVTNQIAMSNVRAPIGPTRNGGIC 120

Query: 121 MFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEK 180
           + L DPEVLDC +C E L++P+FQCENGH ACSSCC KL  +C TCS PIGYNRCRA+EK
Sbjct: 121 VTLTDPEVLDCPVCYESLTIPVFQCENGHTACSSCCKKLLQKCPTCSLPIGYNRCRAIEK 180

Query: 181 VLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSK 240
           VLES++L C+  KYGCKE+V+Y  + DHEK C HAPC CP   C+FV SS+Q+  HFS+K
Sbjct: 181 VLESVRLSCQNLKYGCKEIVNYSKKVDHEKICSHAPCFCPSSGCSFVGSSRQIYQHFSNK 240

Query: 241 HTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLK 300
           H  +A+ F++ ++F +    ND  R+L+E+ +G+LFIL+N+ + +GN + V C+ P S K
Sbjct: 241 HKGAAVLFRYGNTFPVFFTLNDKSRILREEKEGVLFILNNTAEVVGNIITVSCIGPSSPK 300

Query: 301 EAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCP-STRFLLIPRDLFSSSGMIKLNICIWQ 350
             + Y+L  + +  +L  QS  KNI+  +D  P S  FL++P   F S G I L++CIW+
Sbjct: 301 GGYFYELAAKMEGSNLKFQSFTKNIRKVNDDDPHSQDFLVVPASFFGSYGQISLDLCIWR 351

[Close]
BLAST of CmoCh04G024040 vs. TAIR10
Match: AT5G37930.1 (AT5G37930.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 218.8 bits (556), Expect = 5.4e-57
Identity = 133/349 (38.11%), Postives = 190/349 (54.44%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MA+FSV G +DGE  S+ +    KR+R    I+        +     GEE   +   +  
Sbjct: 1   MARFSVCGGDDGEGPSNNNHQSRKRQRLP-SIDENEEDAETSDAGSSGEEDEDETQNQGM 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
             + E R     D   E V E+        V S S +  ++  +S+ L+DP+VLDC ICC
Sbjct: 61  RPESEDRGSTSDDSDREVVIEERRFGKF--VNSQSSSSSKDSPLSVTLLDPDVLDCPICC 120

Query: 121 EPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYG 180
           EPL +PIFQC+NGH+AC+ CC K++NRC +C+ PIGY RCRA+EKV+E+ ++ C  +KYG
Sbjct: 121 EPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYG 180

Query: 181 CKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFT 240
           CKE  SYG+   HE+ C+  PC CP+ DC++    K L+ H  ++H D  ISF +++  T
Sbjct: 181 CKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLT 240

Query: 241 ICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVETQD 300
           I L+ N    +LQE+ DG + ++          V V C+ P  P +    S  L   T D
Sbjct: 241 ISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGR-LSCRLAKITVD 300

Query: 301 LSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQNTG 348
             L     +KNIQ  ++  P   F+LIP  LF  SG   LN+ IW   G
Sbjct: 301 SLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF--SGNDNLNLQIWIGHG 343

[Close]
BLAST of CmoCh04G024040 vs. TAIR10
Match: AT5G37890.1 (AT5G37890.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 179.5 bits (454), Expect = 3.6e-45
Identity = 96/246 (39.02%), Postives = 137/246 (55.69%), Query Frame = 1 

Query: 88  LCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNR 147
           L S  +  R+ K+    S  L+D E+LDC IC E  ++PIFQC+NGH+ACSSCC KL N+
Sbjct: 26  LSSSDAAKRDAKKR---STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNK 85

Query: 148 CATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLP 207
           C  C+ P+G+NRCRA+E VLESI +PC  +K GCK+ VSYG E  HEK+C+ + C CP  
Sbjct: 86  CPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPAL 145

Query: 208 DCNFVASSKQLSLHFSSKHTD--SAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSN 267
           DCN+ +S K L  H+   H +     +F      ++ +N +    +  E     LF +  
Sbjct: 146 DCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQC 205

Query: 268 SFDHLGNAVKVCCLRPPSLK-EAFSYDLRVETQDLSLVLQS-SMKNIQSSSDCCPSTRFL 327
             +  G  V V C+ P S +   +SY L       +++ QS  +K +   S   P   F+
Sbjct: 206 FREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFM 265

Query: 328 LIPRDL 330
           LIP  L
Sbjct: 266 LIPNSL 268

[Close]
BLAST of CmoCh04G024040 vs. TAIR10
Match: AT5G37870.1 (AT5G37870.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-43
Identity = 95/270 (35.19%), Postives = 151/270 (55.93%), Query Frame = 1 

Query: 80  EEDGTENALCS-VKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACS 139
           E +G++   CS + S     + + + S  L D ++LDC IC + L +P+FQC NGH+ACS
Sbjct: 8   ERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLACS 67

Query: 140 SCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCL 199
           SCC KL+N+C  C+ P+G+ RCRA+E+VLES+ +PC+ +  GC + + YG ES HEK C 
Sbjct: 68  SCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICN 127

Query: 200 HAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFS--SSFTICLNANDNYRVLQEQG 259
            +PC CP+  CN+  S K L  H+   H+  + ++ F+  S     +  +D   + +   
Sbjct: 128 FSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVYE 187

Query: 260 DGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVET-QDLSLVLQS-SMKNIQS 319
             +LF++    +  G  V V C+ P  P + E FSY L   T + +++  QS  +K +  
Sbjct: 188 KKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGE-FSYGLLYTTWEGVTMTYQSPKVKKVLK 247

Query: 320 SSDCCPSTRFLLIPRDLFSSSGMIKLNICI 343
            S   P   F+LIP  L     ++ + +CI
Sbjct: 248 VSSQRPKDSFMLIPHSLLCGP-LLGMMLCI 275

[Close]
BLAST of CmoCh04G024040 vs. TAIR10
Match: AT5G37910.1 (AT5G37910.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40
Identity = 90/266 (33.83%), Postives = 141/266 (53.01%), Query Frame = 1 

Query: 87  ALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKN 146
           AL S       V +    ++ L+D ++LDC ICCE L+ PIFQC+NGH+AC SCC KL N
Sbjct: 9   ALISQGDGGERVAKRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSN 68

Query: 147 RCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPL 206
           +C  C+ P+G++R RA+E VLESI +PC   ++GC +   YG ES HEK+C+ + C CP 
Sbjct: 69  KCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPS 128

Query: 207 PDCNFVASSKQLSLHFSSKHTDSAI----SFQFSSSFTICLNANDNYRVLQEQGDGILFI 266
             C++  S K L  H+   H+ +       F+ ++ FT  +  +D   + +     +L  
Sbjct: 129 SVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLA 188

Query: 267 LSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVETQDLSLVLQS-SMKNIQSSSDCCPS 326
           +    +  G  V V  + P  P + E FSY L       ++  +S  +K +   S   P 
Sbjct: 189 VQCFREPCGVYVTVSFIAPSAPEVGE-FSYQLSYNVDGHTVTYESPEVKRVCKVSIETPQ 248

Query: 327 TRFLLIPRDLFSSSGMIKLNICIWQN 346
             F+LIP  L     ++++ + I +N
Sbjct: 249 ENFMLIPHSLLRGD-LLEMQVFIIEN 272

[Close]
BLAST of CmoCh04G024040 vs. TAIR10
Match: AT1G66620.1 (AT1G66620.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 162.5 bits (410), Expect = 4.6e-40
Identity = 100/282 (35.46%), Postives = 138/282 (48.94%), Query Frame = 1 

Query: 66  QRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSV 125
           +RKR R+    E VE  G +            V  +G+    L + ++LDC ICC  L+ 
Sbjct: 9   RRKRQRVPSSVESVENGGGDA-----------VARSGT----LFELDLLDCPICCHALTS 68

Query: 126 PIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMV 185
           PIFQC+NGHIACSSCC KL+N+C +C+ PIG  R R +E+V+E++ + C   K+GC E  
Sbjct: 69  PIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKF 128

Query: 186 SYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICLNA 245
           SYG E  HEK C  A C CP P+CN+    K L  HF   H D+       +     L  
Sbjct: 129 SYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDTWNQIGCGNFAGAWLRI 188

Query: 246 NDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKE---AFSYDLRVETQDLS 305
           ++   VLQ  G G L  +    +  G  V V C+ P  P + E     SY + +      
Sbjct: 189 SEKILVLQ-YGQGPLIAVQCFKETQGMYVTVNCIAPCAPGVGELSFELSYKMPMGGNSTM 248

Query: 306 LVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 343
           +     M  IQ  S   P   F+L+P         +K+ ICI
Sbjct: 249 MFKSEEMNRIQKVSFQTPEKDFMLVPYYFLGDFSTLKMEICI 274

[Close]
BLAST of CmoCh04G024040 vs. NCBI nr
Match: gi|659121126|ref|XP_008460511.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo])

HSP 1 Score: 556.6 bits (1433), Expect = 3.1e-155
Identity = 270/349 (77.36%), Postives = 305/349 (87.39%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSV GEED  DG   SSPR KRKR+SFRINA V+FPR +++ E+GEEQGF+  KEE+
Sbjct: 1   MAKFSVDGEEDAGDGP--SSPRGKRKRSSFRINATVDFPRRSEQREQGEEQGFNSDKEES 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
            +DE+Q KRHR D IEE + EDG + AL S KSC++N K NGS+SMFLIDPEVLDCSICC
Sbjct: 61  ENDEDQSKRHRNDEIEEHLREDGGKRALWSGKSCTKNAKPNGSVSMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYG 180
           EPLS+PIFQCENGHIACSSCCNKLKN+CATCSWPIGYNRCRAVEKVLESIKLPCKQSK+G
Sbjct: 121 EPLSIPIFQCENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKLPCKQSKFG 180

Query: 181 CKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFT 240
           CKE++ YG+ESDHEK CL+APC CP  DC F+AS+KQLSLHFS+KHT+SA +F FSSSFT
Sbjct: 181 CKEIIGYGNESDHEKTCLYAPCLCPYSDCKFIASAKQLSLHFSNKHTNSATNFHFSSSFT 240

Query: 241 ICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDLRVETQDLS 300
           ICL  ND Y VLQEQ DG+LFILSNS ++LG+ VK+CCL+PPSLKE FSYDLR ETQDLS
Sbjct: 241 ICLKTNDTYHVLQEQ-DGVLFILSNSSENLGSVVKICCLQPPSLKETFSYDLRAETQDLS 300

Query: 301 LVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQNTGAP 350
           LVLQSSMKNIQSSSDCC STRFL+IPRDLFSSSGMIKLNICIWQN  +P
Sbjct: 301 LVLQSSMKNIQSSSDCCHSTRFLMIPRDLFSSSGMIKLNICIWQNGSSP 346

[Close]
BLAST of CmoCh04G024040 vs. NCBI nr
Match: gi|764606792|ref|XP_011467109.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 301.2 bits (770), Expect = 2.3e-78
Identity = 160/357 (44.82%), Postives = 220/357 (61.62%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVV--NFPRHNQRCEEGEEQGFDYCKE 60
           M +FS+GG+EDG      SSPR KR+R   R  A +     R     +  E++      E
Sbjct: 1   MTRFSLGGDEDG---GGPSSPRLKRRRLILRTAATIATGDRRRGGGLQAVEDESASSESE 60

Query: 61  ETASDEEQRKRHRIDGIEEQVE------EDGTENALCSVKSCSRNVKENGSISMFLIDPE 120
           +   + E  +    +G +E         E G+ +A   +   S     + SIS+ L DP+
Sbjct: 61  DEEDESESEEEEESEGDQEHQRQLRTNFELGSASAAQQIALASTTTATDRSISITLADPD 120

Query: 121 VLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKL 180
           VLDC ICCE L+VP+FQCENGHIACSSC  K+KN+C +CSWPIGYNRCRA+EKVLESI++
Sbjct: 121 VLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRCRAIEKVLESIRI 180

Query: 181 PCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAIS 240
            C+  KYGCKE ++  ++++HEK C+H+PC CP   CNFV+S+KQL  HFSS H +SA  
Sbjct: 181 SCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQHFSSNHLNSATR 240

Query: 241 FQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDL 300
           F ++ SF+I +N ND + VLQE+ DG+LFIL N  + +GN V++  ++ P     F YDL
Sbjct: 241 FLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSIQ-PRFMGGFFYDL 300

Query: 301 RVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQNTGAP 350
             + +   L LQS   + QS      S+  L+IP D FSS G +KL+ICIW+N   P
Sbjct: 301 TAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFFSSCGQLKLDICIWRNGQCP 353

[Close]
BLAST of CmoCh04G024040 vs. NCBI nr
Match: gi|764606798|ref|XP_011467110.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 300.4 bits (768), Expect = 4.0e-78
Identity = 162/359 (45.13%), Postives = 222/359 (61.84%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVV--NFPRHNQRCEEGEEQGFDYCKE 60
           M +FS+GG+EDG      SSPR KR+R   R  A +     R     +  E++      E
Sbjct: 1   MTRFSLGGDEDG---GGPSSPRLKRRRLILRTAATIATGDRRRGGGLQAVEDESASSESE 60

Query: 61  ETASDEEQRKRHRIDGIEEQVE------EDGTENALCSVKSCSRNVKENGSISMFLIDPE 120
           +   + E  +    +G +E         E G+ +A   +   S     + SIS+ L DP+
Sbjct: 61  DEEDESESEEEEESEGDQEHQRQLRTNFELGSASAAQQIALASTTTATDRSISITLADPD 120

Query: 121 VLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKL 180
           VLDC ICCE L+VP+FQCENGHIACSSC  K+KN+C +CSWPIGYNRCRA+EKVLESI++
Sbjct: 121 VLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRCRAIEKVLESIRI 180

Query: 181 PCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAIS 240
            C+  KYGCKE ++  ++++HEK C+H+PC CP   CNFV+S+KQL  HFSS H +SA  
Sbjct: 181 SCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQHFSSNHLNSATR 240

Query: 241 FQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDL 300
           F ++ SF+I +N ND + VLQE+ DG+LFIL N  + +GN V++  ++ P     F YDL
Sbjct: 241 FLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSIQ-PRFMGGFFYDL 300

Query: 301 RVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQN---TGA 349
             + +   L LQS   + QS      S+  L+IP D FSS G +KL+ICIW+N   TGA
Sbjct: 301 TAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFFSSCGQLKLDICIWRNVCLTGA 355

[Close]
BLAST of CmoCh04G024040 vs. NCBI nr
Match: gi|470135025|ref|XP_004303331.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 299.7 bits (766), Expect = 6.8e-78
Identity = 159/353 (45.04%), Postives = 219/353 (62.04%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVV--NFPRHNQRCEEGEEQGFDYCKE 60
           M +FS+GG+EDG      SSPR KR+R   R  A +     R     +  E++      E
Sbjct: 1   MTRFSLGGDEDG---GGPSSPRLKRRRLILRTAATIATGDRRRGGGLQAVEDESASSESE 60

Query: 61  ETASDEEQRKRHRIDGIEEQVE------EDGTENALCSVKSCSRNVKENGSISMFLIDPE 120
           +   + E  +    +G +E         E G+ +A   +   S     + SIS+ L DP+
Sbjct: 61  DEEDESESEEEEESEGDQEHQRQLRTNFELGSASAAQQIALASTTTATDRSISITLADPD 120

Query: 121 VLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKL 180
           VLDC ICCE L+VP+FQCENGHIACSSC  K+KN+C +CSWPIGYNRCRA+EKVLESI++
Sbjct: 121 VLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRCRAIEKVLESIRI 180

Query: 181 PCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAIS 240
            C+  KYGCKE ++  ++++HEK C+H+PC CP   CNFV+S+KQL  HFSS H +SA  
Sbjct: 181 SCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQHFSSNHLNSATR 240

Query: 241 FQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDL 300
           F ++ SF+I +N ND + VLQE+ DG+LFIL N  + +GN V++  ++ P     F YDL
Sbjct: 241 FLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSIQ-PRFMGGFFYDL 300

Query: 301 RVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQN 346
             + +   L LQS   + QS      S+  L+IP D FSS G +KL+ICIW+N
Sbjct: 301 TAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFFSSCGQLKLDICIWRN 349

[Close]
BLAST of CmoCh04G024040 vs. NCBI nr
Match: gi|703146966|ref|XP_010108933.1| (E3 ubiquitin-protein ligase SINA-like 10 [Morus notabilis])

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 164/364 (45.05%), Postives = 222/364 (60.99%), Query Frame = 1 

Query: 1   MAKFSVGGEEDGEDGSSTSS---PRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCK 60
           MAKFS+ G+E+ ++G S  +   PR     T F  +     PR  +  EE ++   D   
Sbjct: 1   MAKFSLLGDEEDDEGPSCPALKRPRFDYAATPFSSDEDNEPPRRQEEQEEDDDVQID--- 60

Query: 61  EETASDEEQRKRHRIDGIEEQVEEDGT--ENALCSVKSCSRNVKENG----------SIS 120
               +D+      R+ G  E + EDG   EN+  +V S S +  +            SIS
Sbjct: 61  --GENDDFIITSPRLRG--EWITEDGAGEENSELNVDSISADANQEDPRPLSTNSDRSIS 120

Query: 121 MFLIDPEVLDCSICCEPLSVPIFQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEK 180
           +FL DP+VLDC IC E L+VP+FQCENGHIACSSCC KL N+C +CSWPIGYNRCRA+EK
Sbjct: 121 VFLTDPDVLDCCICFEALTVPVFQCENGHIACSSCCTKLGNKCPSCSWPIGYNRCRAIEK 180

Query: 181 VLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSK 240
           VLES+K+ C+  +YGCKEMVSY    DHE  C HAPC CPL  CNF++S+KQL  HF S+
Sbjct: 181 VLESVKIACQNKQYGCKEMVSYSEIKDHETTCTHAPCSCPLTSCNFISSAKQLYQHFRSQ 240

Query: 241 HTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLK 300
           H DSA+ FQ++  FT+ LN  D + VLQE+  G LFIL+N  + LGN V V C+ P S  
Sbjct: 241 HADSAVLFQYNCDFTVTLNEGDKFLVLQERDGGGLFILNNETETLGNLVSVSCIGPYSFG 300

Query: 301 EAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQN 350
           +++ Y+L  +    +L L+S     Q  +D   S+ +LLIP   F SSG +KL++ I ++
Sbjct: 301 KSY-YNLLAKCDGNTLRLESFATCTQGQADYSLSSVYLLIPPGFFGSSGQLKLDLFIERH 356

The following BLAST results are available for this feature:
BLAST of CmoCh04G024040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SIL10_ARATH9.5e-5638.11E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE... [more]
SINL7_ARATH6.4e-4439.02E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=... [more]
SINL6_ARATH2.1e-4235.19Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g... [more]
SINL9_ARATH2.1e-3933.83Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g... [more]
SINL2_ARATH8.1e-3935.46E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana GN=At1g66620 PE=... [more]
BLAST of CmoCh04G024040 vs. TrEMBL
Match NameE-valueIdentityDescription
W9S0Z7_9ROSA7.6e-7645.05E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1[more]
B9T323_RICCO4.1e-7444.72E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_0326980 PE=3 SV=1[more]
A0A067FAH4_CITSI1.7e-7246.65E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1[more]
V4UW18_9ROSI1.7e-7246.65E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1[more]
A0A067JT13_JATCU1.5e-7141.37E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_02506 PE=3 SV=1[more]
BLAST of CmoCh04G024040 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37930.15.4e-5738.11 Protein with RING/U-box and TRAF-like domains[more]
AT5G37890.13.6e-4539.02 Protein with RING/U-box and TRAF-like domains[more]
AT5G37870.11.2e-4335.19 Protein with RING/U-box and TRAF-like domains[more]
AT5G37910.11.2e-4033.83 Protein with RING/U-box and TRAF-like domains[more]
AT1G66620.14.6e-4035.46 Protein with RING/U-box and TRAF-like domains[more]
BLAST of CmoCh04G024040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121126|ref|XP_008460511.1|3.1e-15577.36PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo][more]
gi|764606792|ref|XP_011467109.1|2.3e-7844.82PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X1 [Fragaria vesca s... [more]
gi|764606798|ref|XP_011467110.1|4.0e-7845.13PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Fragaria vesca s... [more]
gi|470135025|ref|XP_004303331.1|6.8e-7845.04PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca s... [more]
gi|703146966|ref|XP_010108933.1|1.1e-7545.05E3 ubiquitin-protein ligase SINA-like 10 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004162SINA-like
IPR008974TRAF-like
IPR013010Znf_SIAH
IPR013083Znf_RING/FYVE/PHD
IPR013323SIAH-type domain
IPR0181217-in-absentia-prot_TRAF-dom
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0007275multicellular organism development
GO:0016567protein ubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G024040.1CmoCh04G024040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315SEVEN IN ABSENTIA HOMOLOGcoord: 1..344
score: 3.6
IPR008974TRAF-likeunknownSSF49599TRAF domain-likecoord: 169..342
score: 1.77
IPR013010Zinc finger, SIAH-typePROFILEPS51081ZF_SIAHcoord: 169..227
score: 14
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 112..175
score: 3.
IPR013323SIAH-type domainGENE3DG3DSA:3.90.890.10coord: 176..222
score: 9.6
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 159..327
score: 7.7
NoneNo IPR availablePANTHERPTHR10315:SF43E3 UBIQUITIN-PROTEIN LIGASEcoord: 1..344
score: 3.6