CmoCh04G020520 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G020520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	nuclear matrix constituent protein-related
Location	Cmo_Chr04 : 11454411 .. 11459559 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTAAATCCTTGGTTTTATTATTATTATTATTATTATCTTTTACTAATTATGTCAAATCCATTATCATTTGGGTTGAAGATATGTGATGTATTTTCCAATTTTGATTTGGCATCTCCCTTCGACCCATCTCAATTTCAATCGATAGTGACACAAATTTGAGTTCCTCGTCAACTTTTTAAGGTTGCAAGCTTACAAGCTACACGTAAATTATGCGAAGTGATTTGATGAGTCTAGATATATATAAGATGAGTTGATGAGTGAGGCTGAACATTTGTTTGGTGGGATGGAATGATGTTTGCGGGTGTATGGTCTGAGTTGGATTGGGTTGAGAGATTTTTGATGATGTTTGTGGGTGTATGGTCTGAGTTGGTTTGTTTGAGATTTTTGATGATGTTTGTGGGTGTATGGTCTGAGTTGGTTTGTTTGGTGGGATGGGATAATGTTTGTGAGTGTATGGTCTGAGTAATGTTTGTGAGTGTATGGTCTGAGTTGGATTGGGTTGAGAGATTTTTTTTACCATCCAACCCAATAGTTTAAAAAAATAAAAAATAAAATAATCAAAATAAAGATAATACAAATAAATTTTAAAAATAAAAAATAATAAAAATAATTAGTTTAAAAAAACAAACTATACATATAAAAAAAATACAAATAAATTATGAAAATAAAAAATAATAAAAATGATTAGTTAACTGCACCTATAAAAAAAAATAATAAAAATGATTAGTTAACTATACCTATAAAAAAAAATATTATAAAAAAAATATTATAAAAAAAATATGAATTCGACAGAAGTCGACCATGGGTACAGAGTACTGAGCCATAACAACCACTCTGCCAGACCCATGAATACGGTTCACTTCTCAATGTTTACACCTTTTATTTCATTTAGGTCCAACCCGAGTTTTCTTGTTCTATGAACCGAAACCGAACCGATTCCTGATTGTTTAGTTATTTATTCCCGACTGAATTGAACAGAAACGGTGGAACTACGGTTTCTGTAGAACTTGTGGGAGCATCTCAATTCTTTTGTGTTTGTTTTCAATTCATTACACACCGCCCACCGCCGCCGTTGGGGTCTCTGAACGACCGATTCCATAATATTGCAGCGGCTGCGGACACTGGGGACATGGACGATTGGAGGAAGTTTAAGAAGGCGGGGTTGTTGGACGCGGCTGCAATGGAGCGCAAGGATTGGGAGGCGCTTCTTCAGAATGCTTCAAGGCTTCAGAGCGAGGTTAGCAATTATCATCAACTCTTACTTCTTTTCTATCTTCGGATTAATTGGGGTTGAACTGTAACGTTATGGCATATGCATTTATGTGATACACTGGACTACAAGTTTTGGCCCTGCTAAAAGCTAGCTTCTATTGTTACTCAGGTTGGTTCATGTTTAGCAAATAAGAGAAGAAATCAAGCCTAGCACAAATTTAAGCCTGGTTAATGCACAATATCAAGAAAAACCATTGAATATGCCTTTCAAAACTCACAAATTCATGTTGCAACAGTCAACAAATGCCAAACTCATCCACTAATTTTAATGAATAGTATAGTGAACATCTCTCCAAACTTAATAATTCAACAAAAATCAAGCCTAGCATAAACTTAAGCCCGCTAATGCACAAGATCGAGAAAAACCATTGAATATGCCTTTCAAAACTCACAAATTCAACAAACCCAGCTCTAGTATTGTTTTTCTTTGAAGAGCTTCATTAATTTTATAGTAGACTTCTGTTTTATATTTATTAAATGTACATAAGAATATTTTCATTGAAAATTTTGAATTCTATCATAGGGAAAGACTTTCAATGCTTATTTAGGGTTAAGATAGCGATGCTTATCAAAAGTTTGAGGTGCATTTTGATGAAATTAAAAGTTCAGGGTATAAATTGTTTCTTTCCCTTAAAATTTTAAAATAGTTTTGGCAAATTTAGGCAATCATGGGGTGAAATATTGAATTCCAATGTATAGAAAAATAGGTACTCTTGTGATTTTTTTGAGCAATTATACTTATGTTGGTAGGTTTAATCAGGTTGGAACTTCATACCTAGGAAGCTGAGATACTGTTTCCATTTAGATGAAGGGAGAAAAAATGTTTTTTTTTTTTTGCCTTTTGTTTTGTCTTTTTAATGTAATAGATGTATGCATTATAATGTTGATGTGTTTAGCACAATCATCCTACAAGATGGGAATAAATGACTTCATTGTTTGTCATTCTTTTGGTATAGTTCCTGTCATCAGAACTTATATTGCTCTTACATGGATTTATCTGATTATTATTTTTGGCAGCTTTTTGATTACCAGCACAATATGGGACTTGTTTTGCTAGAGAAGGAAGCATGTGCTTCAAAGTGTGACCAACTAGAACAAAAATTAGCAGAAACAGTGGAAATCTTCAAACGTGAACGATCAGCACATTTCATTGCATTATCTGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTCTAGTGTATGCTACTCTTGGCACATCCATTCCCCATTAACGTATTTCTTATTTGATAATGTTGCCATTTTCCTTTCTTTTTTGTTTCTTAGATACTCAATTTGTTAGGCCACCAATCGTAAATTTGTACTAGAAAAACATGTAAGTGGTGGGGGGAGTTAAATTTTGTCAGCCCTACTGGTAATTGGGTGAGGTGACGTAGGAGAAGTTGTAACAGAGAGAGTAATGGGAGGGTAGTATCTATTCTTAAGGAGTATGTATTTGTTTAGAAGAGTCTTGTAGTATGGGAGAGAGAGGATCTTATTTTGAAATTTGGACACTAAATTGTGAAGTTATGTCTATACAAATAGATCTTAGATCTTAAAGATTGATTAAATTTTCATACCTATTCTTTCTGCAGCTTAAAAAGGCTTTATGTGAAGCAAAGGAGGAACGTGCAGAAATCGAACTTACTTCTCAGAAAAAGTTGGCTGATGCAAATGCTTTGATATATGAAATTGAGGAGAAATCTTTGGAGTTGGAGAAAAAATTGTATGCTGCCGAAGCGAAGCTTGCTGAGGTAAACAGGAAGAGTTCAGAGTTGGAAATGAGGATGCATAAAGTCGAAAGCAGACCGAGCAACTATCCTTTGTCATAAGGTATTCTTCTCAATATCCTTTTCTTTGAGCAAATGACCCATCAATCTTTGATATGTATGGATTTGGGAGAAATGCTTCTGTTTGAATAATCTTCCTGATATCAAGTAGAAAAGTGGTAGGCTTTAGGCAGAAGAGACCTGACCCTTATCCAATTCGAGGGTCAATATTGGTGAAGTGACCTTGGAAGTTTTCCCTGGTAGCAGACTAGAGGTTTTACTCTTTAAGTCATAGGGTTTGTGATGACTGTTTCTTGAAATTTTATTACTTGTAGCATGTTTCATGGTATCCTGAAGTTTGTTGATATGATATTGATAAATTGATGCTTATCCTCGCCTTATTTTCTCTCTTGATTCCATCCATATTATTTCCTGTTCAAATTTTTATTTAAGGTTGATCATTGATGTTTCAGTGTCGCGCTATTAAAGTGTCAACATTGGAAGAAAGATATGGTAAATGAATCTGGTAGAATAACGTAATATAGTTCTTTATGTGTCTTATATTTGTCCTCTTGATGTTCCTTTCAGATGGAAACCCAGCTTCATGAACAAATTCTCATGAATTGGTTTCTATTCGTCAGGGGTTTGAGCTCAGGGGGAGGAAGGGAAAGTTTGAAGGTGAAGAAAGGCGAGATATGGTCTCATATATATATATATATATATCTCCTCGGGCTTGGCTCGAGATATGAAGTTGAGGAAGATGGATTTCCAGAGAAAGAATGCTGATCCTTCCGTGCTCATAAAAAGGAAACAAGAGGAACCTACTGACCTTACTCCAAAAGTTTGTTGTTACTACGACCTTTGGTTAAAAGAGAATTTCAAAAGTTTGAAAAGTGGGTATAGATTTGGGTATTTAAGAGGGAGAATTTTGGTTGGTGCGTAAAATGACCTAACGTGTGCGATGACATTAGGAGCGATTGAAATTCAAATTTTGAATGTGCATGGAACATCAAACCATATGCATCTCACTTCTCCATTTAACTTTGAATTCTGAACTTTGGATATGGAAAAATTAGTTTTTATATTTCTACCATTTTAATTTTTTTAGTTTGGAGTGAGAAATTAAACATCTGATTTTTTTTCTGACGCCAAATTTTGAAATGAGATGGTAGGAAAAATGCTTAAAAAAATATTAAAAGAAAAAATTAAAAAATTCAGTGATTTGGGTAAGGCTGGACAAACCCCAATTACTAGGTCTCTAGACTCTCTACGCGTTCCCCCCTCTGGCGATAACCCGTTTCGTGTTTTGGGCAGACATAGGCCACAACAACCCCTGCTTCGATTCTCTCCTGCTCCTGCAACCACCACACACAACGACTCCCTTCTCCGCTTTCTCTCTTCCACACCTTTCATTCTTCCTCCGGATTCCTTCTCCCTTCTCTCCCGGCAACGGCAACGACGCCAACCACCTCTTCTTCCGGATACGACGTTAGCTTCTCTTCTGCCCTTTAATTTTCTTTTCCTTTACCCAATCCTGTTATTATAGTGTTCAAAACACGAATGGCGACGTTCAGAAGGGCTGTACTCAAAGCTCATCAAGTTCTGTACCTGAAACCCTCCTCCACCGTTTTCAGAAGCAAATCGATGCCCCTTTTGCCTACCGCTTATATATTGTTGGAGAATCTACAAGGGCGATTACCAAATCACAATCAGAATCAACATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCTACGACTGTAAATCCTTTGTTCACAGATATCGATCTCTCAGATGAAGAGAGCAAGAGGCGTTTGTTCAATAGGTTCAATCTCACTTCCTTTGCATCATTTAACTTTCATCCCCCCCTTGCTTTCTTTCTCTTAATTTTTGGCAATTTTGTTTCGATTGACAAGGTTTTTTGGTTGTTGGATTCAACAGGTTGCTGTACCGGAGCAAACAACGGGGGTTTTTGGAATTGGATTTGGTACTTGGAAAATGGGTAGAAGATCACATCAATTCCTTGGATGCAGATGGTATTAGAGCTCTAATTAAAGTTCTTGACCTGGTAATCTAG

mRNA sequence

ATGGAAGAACTTGTGGGAGCATCTCAATTCTTTTGTGTTTGTTTTCAATTCATTACACACCGCCCACCGCCGCCGTTGGGGTCTCTGAACGACCGATTCCATAATATTGCAGCGGCTGCGGACACTGGGGACATGGACGATTGGAGGAAGTTTAAGAAGGCGGGGTTGTTGGACGCGGCTGCAATGGAGCGCAAGGATTGGGAGGCGCTTCTTCAGAATGCTTCAAGGCTTCAGAGCGAGCTTTTTGATTACCAGCACAATATGGGACTTGTTTTGCTAGAGAAGGAAGCATGTGCTTCAAAGTGTGACCAACTAGAACAAAAATTAGCAGAAACAGTGGAAATCTTCAAACGTGAACGATCAGCACATTTCATTGCATTATCTGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTCTAGTCTTAAAAAGGCTTTATGTGAAGCAAAGGAGGAACGTGCAGAAATCGAACTTACTTCTCAGAAAAAGTTGGCTGATGCAAATGCTTTGATATATGAAATTGAGGAGAAATCTTTGGAGTTGGAGAAAAAATTGTATGCTGCCGAAGCGAAGCTTGCTGAGGGGTTTGAGCTCAGGGGGAGGAAGGGAAAGTTTGAAGTGTTCAAAACACGAATGGCGACGTTCAGAAGGGCTGTACTCAAAGCTCATCAAGTTCTGTACCTGAAACCCTCCTCCACCGTTTTCAGAAGCAAATCGATGCCCCTTTTGCCTACCGCTTATATATTGTTGGAGAATCTACAAGGGCGATTACCAAATCACAATCAGAATCAACATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCTACGACTGTAAATCCTTTGTTCACAGATATCGATCTCTCAGATGAAGAGAGCAAGAGGCGTTTGTTCAATAGGTTGCTGTACCGGAGCAAACAACGGGGGTTTTTGGAATTGGATTTGGTACTTGGAAAATGGGTAGAAGATCACATCAATTCCTTGGATGCAGATGGTATTAGAGCTCTAATTAAAGTTCTTGACCTGGTAATCTAG

Coding sequence (CDS)

ATGGAAGAACTTGTGGGAGCATCTCAATTCTTTTGTGTTTGTTTTCAATTCATTACACACCGCCCACCGCCGCCGTTGGGGTCTCTGAACGACCGATTCCATAATATTGCAGCGGCTGCGGACACTGGGGACATGGACGATTGGAGGAAGTTTAAGAAGGCGGGGTTGTTGGACGCGGCTGCAATGGAGCGCAAGGATTGGGAGGCGCTTCTTCAGAATGCTTCAAGGCTTCAGAGCGAGCTTTTTGATTACCAGCACAATATGGGACTTGTTTTGCTAGAGAAGGAAGCATGTGCTTCAAAGTGTGACCAACTAGAACAAAAATTAGCAGAAACAGTGGAAATCTTCAAACGTGAACGATCAGCACATTTCATTGCATTATCTGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTCTAGTCTTAAAAAGGCTTTATGTGAAGCAAAGGAGGAACGTGCAGAAATCGAACTTACTTCTCAGAAAAAGTTGGCTGATGCAAATGCTTTGATATATGAAATTGAGGAGAAATCTTTGGAGTTGGAGAAAAAATTGTATGCTGCCGAAGCGAAGCTTGCTGAGGGGTTTGAGCTCAGGGGGAGGAAGGGAAAGTTTGAAGTGTTCAAAACACGAATGGCGACGTTCAGAAGGGCTGTACTCAAAGCTCATCAAGTTCTGTACCTGAAACCCTCCTCCACCGTTTTCAGAAGCAAATCGATGCCCCTTTTGCCTACCGCTTATATATTGTTGGAGAATCTACAAGGGCGATTACCAAATCACAATCAGAATCAACATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCTACGACTGTAAATCCTTTGTTCACAGATATCGATCTCTCAGATGAAGAGAGCAAGAGGCGTTTGTTCAATAGGTTGCTGTACCGGAGCAAACAACGGGGGTTTTTGGAATTGGATTTGGTACTTGGAAAATGGGTAGAAGATCACATCAATTCCTTGGATGCAGATGGTATTAGAGCTCTAATTAAAGTTCTTGACCTGGTAATCTAG

Homology

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BLAST of CmoCh04G020520 vs. Swiss-Prot
Match: CRWN2_ARATH (Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana GN=CRWN2 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.3e-40
Identity = 97/217 (44.70%), Postives = 141/217 (64.98%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPP+G+L  +  +     D  DM DWR+F++ GLL+ A+ME+KD EALL+  S L+ EL
Sbjct: 38  PPPPIGTLTGQGVS-RGHTDDMDMGDWRRFREVGLLNEASMEKKDQEALLEKISTLEKEL 97

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           + YQHNMGL+L+E +   SK +QL Q   E  EI KRE+S+H  AL+ VE R +NL+KAL
Sbjct: 98  YGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLYALTTVEQREENLRKAL 157

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
             EKQ V  L+KAL E +EE ++I L+S+ KL +ANAL+  +  +S ++E K+Y+AE+KL
Sbjct: 158 GLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNGRSSDVENKIYSAESKL 217

Query: 202 AEGFELRGRKGKFEVFKTRMATFRRAVLKAHQVLYLK 239
           AE      RK      + +    R +VL+  ++ + K
Sbjct: 218 AEA----TRKSSELKLRLKEVETRESVLQQERLSFTK 249

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BLAST of CmoCh04G020520 vs. Swiss-Prot
Match: CRWN3_ARATH (Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana GN=CRWN3 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.1e-30
Identity = 82/204 (40.20%), Postives = 131/204 (64.22%), Query Frame = 1


Query: 46  DDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSELFDYQHNMGLVLLEKEACASKCDQL 105
           DDW+KFK+ GLLD A++ERKD +AL++   +L+ ELFDYQHNMGL+L+EK+   S  ++L
Sbjct: 39  DDWQKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNEL 98

Query: 106 EQKLAETVEIFKRERSAHFIALSEVETRRDNLKKALAAEKQHVSSLKKALCEAKEERAEI 165
           +Q   E +E+ KRE++++ I L+E + R +NL+KAL  EKQ V+ L+  L   + E + +
Sbjct: 99  QQAYDEAMEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVV 158

Query: 166 ELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKLAEGFELRGRKG-----KFEVFKTR 225
           + TS+ KL +ANAL+  ++EK+LE++++   AE K    F +  RK      K +  +TR
Sbjct: 159 KSTSEAKLEEANALVIGMKEKALEVDRERAIAEEK----FSVMNRKSSELERKLKEVETR 218

Query: 226 MATFRRAVL------KAHQVLYLK 239
               +R  L      +AH+ ++ K
Sbjct: 219 EKVHQREHLSLVTEREAHEAVFYK 238

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BLAST of CmoCh04G020520 vs. Swiss-Prot
Match: CRWN1_ARATH (Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana GN=CRWN1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-26
Identity = 69/138 (50.00%), Postives = 96/138 (69.57%), Query Frame = 1


Query: 66  DWEALLQNASRLQSELFDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFI 125
           D   L +  S L+ ELF+YQH+MGL+L+EK+  +S+ + L+Q   E  E  K+ER+AH I
Sbjct: 48  DPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNAHLI 107

Query: 126 ALSEVETRRDNLKKALAAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEE 185
           A+++VE R + L+KAL  EKQ    L+KAL E + E AEI+ T+  KL +ANAL+  +EE
Sbjct: 108 AIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRSVEE 167

Query: 186 KSLELEKKLYAAEAKLAE 204
           KSLE+E KL A +AKLAE
Sbjct: 168 KSLEVEAKLRAVDAKLAE 185

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BLAST of CmoCh04G020520 vs. Swiss-Prot
Match: CRWN4_ARATH (Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana GN=CRWN4 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 7.2e-19
Identity = 57/156 (36.54%), Postives = 102/156 (65.38%), Query Frame = 1


Query: 48  WRKFKKAGLLDAAAMERKDWEALLQNASRLQSELFDYQHNMGLVLLEKEACASKCDQLEQ 107
           W++ K AG  D  +++ +D  AL+   ++L+SE++DYQHNMGL+LLEK   +S+ ++++ 
Sbjct: 41  WKRLKDAGF-DEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKA 100

Query: 108 KLAETVEIFKRERSAHFIALSEVETRRDNLKKALAAEKQHVSSLKKALCEAKEERAEIEL 167
            + E+     RE+SA+  AL+E + R ++LKK +   K+ +SSL+K L E + E AE ++
Sbjct: 101 SVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKV 160

Query: 168 TSQKKLADANALIYEIEEKSLELEKKLYAAEAKLAE 204
           ++   +++A+ +I +  +K  + E K+ AAEA  AE
Sbjct: 161 SAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAE 195

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BLAST of CmoCh04G020520 vs. Swiss-Prot
Match: SDAF2_ARATH (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana GN=SDHAF2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.1e-18
Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1


Query: 221 MATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 280
           MAT R+A++  H+++  + ++ V RS  +P                P   +N       F
Sbjct: 1   MAT-RKALINVHRII--RSTAVVGRSSIIPAAANR---------SYPIIFRNGVDLGARF 60

Query: 281 RCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 340
            C +T     F DIDLS+EE+KRR  NRLLYRSKQRGFLELDLVLG WVE+++NS+D +G
Sbjct: 61  FCENTASAQNF-DIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENG 117

Query: 341 IRALIKVLDL 351
           +++LI VL+L
Sbjct: 121 VKSLIHVLNL 117

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BLAST of CmoCh04G020520 vs. TrEMBL
Match: F6HF26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02810 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 115/224 (51.34%), Postives = 160/224 (71.43%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPPLGSL+ +   +    D GDM+DWR+ ++AGLLD AAMERKD EAL++  S+LQ+EL
Sbjct: 46  PPPPLGSLSGKA--MLTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEKVSKLQNEL 105

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           FDYQ++MGL+L+EK+   SK ++L Q LAE  EI KRE+SAHFIA+SEVE R +NL+KAL
Sbjct: 106 FDYQYSMGLLLIEKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKREENLRKAL 165

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
             E+Q V+ L+KAL E   E ++I+L+S+ KL+DANAL+ +IE++SLE+E+KL AA+AKL
Sbjct: 166 GVERQCVAELEKALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEKLLAADAKL 225

Query: 202 AEGFELRGR-KGKFEVFKTRMATFRR------AVLKAHQVLYLK 239
           AE        + K +  + R +  RR      A  +AH+  + K
Sbjct: 226 AEASRKSSELERKLQEVEARESVLRRERLSLNAEREAHEATFHK 267

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BLAST of CmoCh04G020520 vs. TrEMBL
Match: A5BQE9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038920 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 115/224 (51.34%), Postives = 160/224 (71.43%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPPLGSL+ +   +    D GDM+DWR+ ++AGLLD AAMERKD EAL++  S+LQ+EL
Sbjct: 64  PPPPLGSLSGKA--MLTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEKVSKLQNEL 123

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           FDYQ++MGL+L+EK+   SK ++L Q LAE  EI KRE+SAHFIA+SEVE R +NL+KAL
Sbjct: 124 FDYQYSMGLLLIEKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKREENLRKAL 183

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
             E+Q V+ L+KAL E   E ++I+L+S+ KL+DANAL+ +IE++SLE+E+KL AA+AKL
Sbjct: 184 GVERQCVAELEKALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEKLLAADAKL 243

Query: 202 AEGFELRGR-KGKFEVFKTRMATFRR------AVLKAHQVLYLK 239
           AE        + K +  + R +  RR      A  +AH+  + K
Sbjct: 244 AEASRKSSELERKLQEVEARESVLRRERLSLNAEREAHEATFHK 285

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BLAST of CmoCh04G020520 vs. TrEMBL
Match: M5Y1X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000415mg PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 108/182 (59.34%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPPLGSL++         DTGDMDDWR+FK+ GLL+ AAMERKD +AL    S+LQ EL
Sbjct: 41  PPPPLGSLSESGPKTIPDFDTGDMDDWRRFKEVGLLNEAAMERKDRQALADKVSKLQKEL 100

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           +DYQ+NMGL+L+EK+  A K ++L + LAET EI KRE+SAH I++SEVE R +NL+K L
Sbjct: 101 YDYQYNMGLLLIEKKEWALKHEELGEALAETQEILKREQSAHLISISEVEKREENLRKVL 160

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
            AEKQ V+ L+KAL E  EE A+I+L S+ KLADAN+L+  IEEKSLE + K  AAEA +
Sbjct: 161 VAEKQCVAELEKALREMHEEHAQIKLKSEAKLADANSLVVGIEEKSLETDAKFLAAEANI 220

Query: 202 AE 204
           AE
Sbjct: 221 AE 222

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BLAST of CmoCh04G020520 vs. TrEMBL
Match: A0A0A0LKF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G072460 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = 1


Query: 217 FKTRMATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGC 276
           F+ +MATF RA+ KAHQVLYLK S T+ RSKSMPLLPTA+I L+NLQ  L N NQN HGC
Sbjct: 64  FERQMATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGC 123

Query: 277 FFSFRCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSL 336
           F S   SST+ NP   DIDLS+E+SKR+LFNRLLYRSKQRGFLELDL+LGKWVEDHI+SL
Sbjct: 124 FSSVHFSSTSTNP---DIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSL 183

Query: 337 DADGIRALIKVLDL 351
           DADGIRALI VLDL
Sbjct: 184 DADGIRALINVLDL 194

[Close]

BLAST of CmoCh04G020520 vs. TrEMBL
Match: B9SEG9_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0704500 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45
Identity = 107/182 (58.79%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPP+ SL+       A A+T DM+DWR+FK+AGLLD A MERKD +AL++ ASRL+ EL
Sbjct: 49  PPPPVASLSGN-----AEAETEDMEDWRRFKEAGLLDEAVMERKDRQALIEKASRLEKEL 108

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           FDYQ+NMGL+L+EK+   SK D+L Q LAE  EI +RE+SA+ I  SE E R +NL+KAL
Sbjct: 109 FDYQYNMGLLLIEKKEWTSKFDELRQALAEAEEILRREQSANIITFSEAEKREENLRKAL 168

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
             EKQ V  L+KAL + +EERA+I+  S+ KLADA AL   IEEKSLE+E+K++AAEAKL
Sbjct: 169 GVEKQCVIDLEKALRDLQEERAQIKHASESKLADAKALSVGIEEKSLEVEEKMHAAEAKL 225

Query: 202 AE 204
            E
Sbjct: 229 TE 225

[Close]

BLAST of CmoCh04G020520 vs. TAIR10
Match: AT1G13220.2 (AT1G13220.2 nuclear matrix constituent protein-related)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-41
Identity = 97/217 (44.70%), Postives = 141/217 (64.98%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPP+G+L  +  +     D  DM DWR+F++ GLL+ A+ME+KD EALL+  S L+ EL
Sbjct: 38  PPPPIGTLTGQGVS-RGHTDDMDMGDWRRFREVGLLNEASMEKKDQEALLEKISTLEKEL 97

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           + YQHNMGL+L+E +   SK +QL Q   E  EI KRE+S+H  AL+ VE R +NL+KAL
Sbjct: 98  YGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLYALTTVEQREENLRKAL 157

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
             EKQ V  L+KAL E +EE ++I L+S+ KL +ANAL+  +  +S ++E K+Y+AE+KL
Sbjct: 158 GLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNGRSSDVENKIYSAESKL 217

Query: 202 AEGFELRGRKGKFEVFKTRMATFRRAVLKAHQVLYLK 239
           AE      RK      + +    R +VL+  ++ + K
Sbjct: 218 AEA----TRKSSELKLRLKEVETRESVLQQERLSFTK 249

[Close]

BLAST of CmoCh04G020520 vs. TAIR10
Match: AT1G68790.1 (AT1G68790.1 little nuclei3)

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 82/204 (40.20%), Postives = 131/204 (64.22%), Query Frame = 1


Query: 46  DDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSELFDYQHNMGLVLLEKEACASKCDQL 105
           DDW+KFK+ GLLD A++ERKD +AL++   +L+ ELFDYQHNMGL+L+EK+   S  ++L
Sbjct: 39  DDWQKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNEL 98

Query: 106 EQKLAETVEIFKRERSAHFIALSEVETRRDNLKKALAAEKQHVSSLKKALCEAKEERAEI 165
           +Q   E +E+ KRE++++ I L+E + R +NL+KAL  EKQ V+ L+  L   + E + +
Sbjct: 99  QQAYDEAMEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVV 158

Query: 166 ELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKLAEGFELRGRKG-----KFEVFKTR 225
           + TS+ KL +ANAL+  ++EK+LE++++   AE K    F +  RK      K +  +TR
Sbjct: 159 KSTSEAKLEEANALVIGMKEKALEVDRERAIAEEK----FSVMNRKSSELERKLKEVETR 218

Query: 226 MATFRRAVL------KAHQVLYLK 239
               +R  L      +AH+ ++ K
Sbjct: 219 EKVHQREHLSLVTEREAHEAVFYK 238

[Close]

BLAST of CmoCh04G020520 vs. TAIR10
Match: AT1G67230.1 (AT1G67230.1 little nuclei1)

HSP 1 Score: 121.7 bits (304), Expect = 9.0e-28
Identity = 69/138 (50.00%), Postives = 96/138 (69.57%), Query Frame = 1


Query: 66  DWEALLQNASRLQSELFDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFI 125
           D   L +  S L+ ELF+YQH+MGL+L+EK+  +S+ + L+Q   E  E  K+ER+AH I
Sbjct: 48  DPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNAHLI 107

Query: 126 ALSEVETRRDNLKKALAAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEE 185
           A+++VE R + L+KAL  EKQ    L+KAL E + E AEI+ T+  KL +ANAL+  +EE
Sbjct: 108 AIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRSVEE 167

Query: 186 KSLELEKKLYAAEAKLAE 204
           KSLE+E KL A +AKLAE
Sbjct: 168 KSLEVEAKLRAVDAKLAE 185

[Close]

BLAST of CmoCh04G020520 vs. TAIR10
Match: AT5G65770.2 (AT5G65770.2 little nuclei4)

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 57/156 (36.54%), Postives = 102/156 (65.38%), Query Frame = 1


Query: 48  WRKFKKAGLLDAAAMERKDWEALLQNASRLQSELFDYQHNMGLVLLEKEACASKCDQLEQ 107
           W++ K AG  D  +++ +D  AL+   ++L+SE++DYQHNMGL+LLEK   +S+ ++++ 
Sbjct: 41  WKRLKDAGF-DEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKA 100

Query: 108 KLAETVEIFKRERSAHFIALSEVETRRDNLKKALAAEKQHVSSLKKALCEAKEERAEIEL 167
            + E+     RE+SA+  AL+E + R ++LKK +   K+ +SSL+K L E + E AE ++
Sbjct: 101 SVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKV 160

Query: 168 TSQKKLADANALIYEIEEKSLELEKKLYAAEAKLAE 204
           ++   +++A+ +I +  +K  + E K+ AAEA  AE
Sbjct: 161 SAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAE 195

[Close]

BLAST of CmoCh04G020520 vs. TAIR10
Match: AT5G51040.3 (AT5G51040.3 unknown protein)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 1


Query: 221 MATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 280
           MAT R+A++  H+++  + ++ V RS  +P                P   +N       F
Sbjct: 1   MAT-RKALINVHRII--RSTAVVGRSSIIPAAANR---------SYPIIFRNGVDLGARF 60

Query: 281 RCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 340
            C +T     F DIDLS+EE+KRR  NRLLYRSKQRGFLELDLVLG WVE+++NS+D +G
Sbjct: 61  FCENTASAQNF-DIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENG 118

Query: 341 IRALIKVLDLV 352
           +++LI VL+LV
Sbjct: 121 VKSLIHVLNLV 118

[Close]

BLAST of CmoCh04G020520 vs. NCBI nr
Match: gi|659072986|ref|XP_008467201.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis melo])

HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71
Identity = 158/216 (73.15%), Postives = 173/216 (80.09%), Query Frame = 1


Query: 19  THRPPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQ 78
           T  PPPPLGSLND  +  A A DTGDMDDWRKFKKAGLLDAAAMERKD EALL+ ASRLQ
Sbjct: 39  TDDPPPPLGSLNDELYKTATAVDTGDMDDWRKFKKAGLLDAAAMERKDREALLEKASRLQ 98

Query: 79  SELFDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLK 138
           SELFDYQHNMGL+L+EK+  A K DQLEQ LAET EIFKRE+SAH IALSEVETRRDNLK
Sbjct: 99  SELFDYQHNMGLLLIEKKDWALKFDQLEQDLAETEEIFKREQSAHLIALSEVETRRDNLK 158

Query: 139 KALAAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAE 198
           KALAAEKQHVSSLKK+L E  EERAEI+LTSQKKLADANAL++ IEEKSLEL+KKL AAE
Sbjct: 159 KALAAEKQHVSSLKKSLYEVNEERAEIKLTSQKKLADANALMHGIEEKSLELQKKLNAAE 218

Query: 199 AKLAEGFELRGRKGKFEVFKTRMATFRRAVLKAHQV 235
           AKLAE      RK      +      R +VL+  Q+
Sbjct: 219 AKLAE----VNRKSSELEMRMHEVEARESVLQTEQI 250

[Close]

BLAST of CmoCh04G020520 vs. NCBI nr
Match: gi|449458807|ref|XP_004147138.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 5.8e-69
Identity = 154/216 (71.30%), Postives = 170/216 (78.70%), Query Frame = 1


Query: 19  THRPPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQ 78
           T  PPPPLGSLND  +  A A DTGDMDDWRKFKKAGLLDAAAMERKD EALL+ ASRLQ
Sbjct: 39  TDDPPPPLGSLNDELYKTATAVDTGDMDDWRKFKKAGLLDAAAMERKDREALLEKASRLQ 98

Query: 79  SELFDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLK 138
           SEL DYQHN+GL+L+EK+  ASK D+L Q LAET EIFKRE+SAH IALSEVETRRDNLK
Sbjct: 99  SELLDYQHNLGLLLIEKKDWASKFDELGQDLAETEEIFKREQSAHLIALSEVETRRDNLK 158

Query: 139 KALAAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAE 198
           KALAAEKQHVSSLK A  E  EERAEI+LTSQKKLADANAL++ IEEKSLEL+KKL AAE
Sbjct: 159 KALAAEKQHVSSLKMAFYEVNEERAEIKLTSQKKLADANALMHGIEEKSLELQKKLNAAE 218

Query: 199 AKLAEGFELRGRKGKFEVFKTRMATFRRAVLKAHQV 235
           AKLAE      RK      +      R +VL+  Q+
Sbjct: 219 AKLAE----VNRKSSELEMRMHEVEARESVLQTEQI 250

[Close]

BLAST of CmoCh04G020520 vs. NCBI nr
Match: gi|694417100|ref|XP_009336642.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 206.8 bits (525), Expect = 6.0e-50
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPPLGSL++      A  DTGDMDDWR FK+AG LD A+MERKD +AL +  S+LQ+EL
Sbjct: 42  PPPPLGSLSENGPYTTAGLDTGDMDDWRAFKEAGFLDEASMERKDHQALAEKVSKLQTEL 101

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           FDYQ+NMGL+L+EK+  ASK ++L Q LAET EI KRE+SAH IA+SEVE R +NL++ L
Sbjct: 102 FDYQYNMGLLLIEKKEWASKNEELSQALAETQEILKREQSAHLIAISEVEKREENLRRVL 161

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
            AEKQ V+ L+K L E  EE A+I+  S+ K+ADAN+L+  IEEKSLE + KL AAEAKL
Sbjct: 162 VAEKQCVAQLEKTLHEMHEEHAQIKRESEAKMADANSLVVGIEEKSLETDAKLCAAEAKL 221

Query: 202 AE 204
           AE
Sbjct: 222 AE 223

[Close]

BLAST of CmoCh04G020520 vs. NCBI nr
Match: gi|694417103|ref|XP_009336643.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 206.8 bits (525), Expect = 6.0e-50
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPPLGSL++      A  DTGDMDDWR FK+AG LD A+MERKD +AL +  S+LQ+EL
Sbjct: 42  PPPPLGSLSENGPYTTAGLDTGDMDDWRAFKEAGFLDEASMERKDHQALAEKVSKLQTEL 101

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           FDYQ+NMGL+L+EK+  ASK ++L Q LAET EI KRE+SAH IA+SEVE R +NL++ L
Sbjct: 102 FDYQYNMGLLLIEKKEWASKNEELSQALAETQEILKREQSAHLIAISEVEKREENLRRVL 161

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
            AEKQ V+ L+K L E  EE A+I+  S+ K+ADAN+L+  IEEKSLE + KL AAEAKL
Sbjct: 162 VAEKQCVAQLEKTLHEMHEEHAQIKRESEAKMADANSLVVGIEEKSLETDAKLCAAEAKL 221

Query: 202 AE 204
           AE
Sbjct: 222 AE 223

[Close]

BLAST of CmoCh04G020520 vs. NCBI nr
Match: gi|658048756|ref|XP_008360063.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein [Malus domestica])

HSP 1 Score: 205.7 bits (522), Expect = 1.3e-49
Identity = 112/182 (61.54%), Postives = 139/182 (76.37%), Query Frame = 1


Query: 22  PPPPLGSLNDRFHNIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLQNASRLQSEL 81
           PPPPLGSL++      A  DTGDMDDWR FK+AG LD A+MERKD +AL +  S+LQ EL
Sbjct: 42  PPPPLGSLSEXGPYTTAGLDTGDMDDWRAFKEAGFLDEASMERKDHQALAEKVSKLQXEL 101

Query: 82  FDYQHNMGLVLLEKEACASKCDQLEQKLAETVEIFKRERSAHFIALSEVETRRDNLKKAL 141
           FDYQ+NMGL+L+EK+  ASK ++L Q LAET EI KRE+SAH IA+SEVE R +NL++ L
Sbjct: 102 FDYQYNMGLLLIEKKEWASKNEELSQALAETQEILKREQSAHLIAISEVEKREENLRRVL 161

Query: 142 AAEKQHVSSLKKALCEAKEERAEIELTSQKKLADANALIYEIEEKSLELEKKLYAAEAKL 201
            AEKQ V+ L+KAL E  EE A+I+  S+ K+ DAN+L+  IEEKSLE + KL AAEAKL
Sbjct: 162 VAEKQCVAQLEKALREMHEEHAQIKRESEAKMVDANSLVVGIEEKSLETDAKLCAAEAKL 221

Query: 202 AE 204
           AE
Sbjct: 222 AE 223

The following BLAST results are available for this feature:

BLAST of CmoCh04G020520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRWN2_ARATH	3.3e-40	44.70	Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana GN=CRWN2 PE=1 SV=1	[more]
CRWN3_ARATH	4.1e-30	40.20	Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana GN=CRWN3 PE=1 SV=1	[more]
CRWN1_ARATH	1.6e-26	50.00	Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana GN=CRWN1 PE=1 SV=1	[more]
CRWN4_ARATH	7.2e-19	36.54	Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana GN=CRWN4 PE=1 SV=2	[more]
SDAF2_ARATH	6.1e-18	44.62	Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana...	[more]

BLAST of CmoCh04G020520 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HF26_VITVI	1.5e-47	51.34	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02810 PE=4 SV=...	[more]
A5BQE9_VITVI	1.5e-47	51.34	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038920 PE=4 SV=1	[more]
M5Y1X5_PRUPE	2.0e-47	59.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000415mg PE=4 SV=1	[more]
A0A0A0LKF9_CUCSA	1.3e-46	75.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G072460 PE=4 SV=1	[more]
B9SEG9_RICCO	1.1e-45	58.79	ATP binding protein, putative OS=Ricinus communis GN=RCOM_0704500 PE=4 SV=1	[more]

BLAST of CmoCh04G020520 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13220.2	1.9e-41	44.70	nuclear matrix constituent protein-related	[more]
AT1G68790.1	2.3e-31	40.20	little nuclei3	[more]
AT1G67230.1	9.0e-28	50.00	little nuclei1	[more]
AT5G65770.2	4.0e-20	36.54	little nuclei4	[more]
AT5G51040.3	1.2e-19	45.04	unknown protein	[more]

BLAST of CmoCh04G020520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072986\|ref\|XP_008467201.1\|	2.8e-71	73.15	PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis m...	[more]
gi\|449458807\|ref\|XP_004147138.1\|	5.8e-69	71.30	PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis s...	[more]
gi\|694417100\|ref\|XP_009336642.1\|	6.0e-50	61.54	PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X1...	[more]
gi\|694417103\|ref\|XP_009336643.1\|	6.0e-50	61.54	PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X2...	[more]
gi\|658048756\|ref\|XP_008360063.1\|	1.3e-49	61.54	PREDICTED: putative nuclear matrix constituent protein 1-like protein [Malus dom...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005631	SDH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G020520.1	CmoCh04G020520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005631	Flavinator of succinate dehydrogenase	GENE3D	G3DSA:1.10.150.250		coord: 300..350 score: 8.5
IPR005631	Flavinator of succinate dehydrogenase	PFAM	PF03937	Sdh5	coord: 307..350 score: 6.4
IPR005631	Flavinator of succinate dehydrogenase	unknown	SSF109910	YgfY-like	coord: 307..350 score: 2.8
None	No IPR available	unknown	Coil	Coil	coord: 127..171 score: -coord: 57..77 score: -coord: 173..193 scor
None	No IPR available	PANTHER	PTHR31908	FAMILY NOT NAMED	coord: 18..203 score: 3.5
None	No IPR available	PANTHER	PTHR31908:SF4	F3F19.25 PROTEIN-RELATED	coord: 18..203 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G020520	CmaCh04G019350	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G020520	Cla016944	Watermelon (97103) v1	cmowmB733
CmoCh04G020520	ClCG11G000550	Watermelon (Charleston Gray)	cmowcgB623
CmoCh04G020520	Lsi11G000550	Bottle gourd (USVL1VR-Ls)	cmolsiB623
CmoCh04G020520	Cp4.1LG01g16830	Cucurbita pepo (Zucchini)	cmocpeB686
CmoCh04G020520	Cla97C11G206870	Watermelon (97103) v2	cmowmbB699
CmoCh04G020520	Bhi07G000005	Wax gourd	cmowgoB0906
CmoCh04G020520	Carg24967	Silver-seed gourd	carcmoB0992

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G020520	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G020520	Cucurbita pepo (Zucchini)	cmocpeB680
CmoCh04G020520	Cucurbita pepo (Zucchini)	cmocpeB682
CmoCh04G020520	Melon (DHL92) v3.6.1	cmomedB746
CmoCh04G020520	Wax gourd	cmowgoB0902
CmoCh04G020520	Wax gourd	cmowgoB0914
CmoCh04G020520	Wild cucumber (PI 183967)	cmocpiB754
CmoCh04G020520	Cucumber (Chinese Long) v2	cmocuB745