CmoCh04G019440 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGTTTTTTTGTTTAAGCACTAGAAATGATTGTATAATTTCATAAATGCCCGCATGGTAATGTGAGAGATTGAGAAACAATGGCACATTCACTATCTTCAATATCCGCCACTGCTAATGCCACAGCCGCCAGATTCAGCAACCCACGATGTTCCTCCTGTCTCAGGCTTCCAAATCTGCAGGCTCGCAGCCAAGCGTGCAATCAAACTGCACGTAGCCATCTCATCTCCCGCAGGTACAACCATTTGTTTCCTATCACTGTGCATCCAATGCGACTATCTGTTAGCCGTACTAGTCTCATTACTTGAATATATCGCAACAGTTTTTAGATTCAATGATGGTCTAACACGACAAATTCTGTGTTCAAATTCCTCTTCAAATTGCAGGAACGCTGCATTGATCTTGACAGGGGCAATCCTAGGACTGAATAATGTGGTTGTCCAGAGTGCAGAGGCGGCTGCCAGGAGGCCGCCGCCACCTCCCCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGCAGAAAGAGGAAGGAAGCCATGAAAGAAGCTATGGCCAAGCTAAGAGAGAGAGGGAAGGCTGTTGACCAGCCACCTCCTGAATAATTTCTCTGAAACATAAAACACTTTTTGATGCTTTGCCTGTCTCCCTTCGGATAGTATGTTAGTCTACCTGAATAAAGAGTGCATATTGTATTAACAACTCCAAACAATTGTTATTCGTTTCATGTGATTAAGGCTATGACCTTGGATAGGATGTGTTCTATAGATTGTACTGAGTTCTAAGTGAAGGTCATGTGATTGAGATTATTCTAAGTTCGGTTTTTCAGATGGAATTAATTTCTGAATTCTATCATGAAAATCAAATCACTGAAATGATGAAGAAGAATCACTTACTATATAGAAATGGCATTACGAATATCATTCCTTTTC ATAGTTTTTTTGTTTAAGCACTAGAAATGATTGTATAATTTCATAAATGCCCGCATGGTAATGTGAGAGATTGAGAAACAATGGCACATTCACTATCTTCAATATCCGCCACTGCTAATGCCACAGCCGCCAGATTCAGCAACCCACGATGTTCCTCCTGTCTCAGGCTTCCAAATCTGCAGGCTCGCAGCCAAGCGTGCAATCAAACTGCACGTAGCCATCTCATCTCCCGCAGGAACGCTGCATTGATCTTGACAGGGGCAATCCTAGGACTGAATAATGTGGTTGTCCAGAGTGCAGAGGCGGCTGCCAGGAGGCCGCCGCCACCTCCCCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGCAGAAAGAGGAAGGAAGCCATGAAAGAAGCTATGGCCAAGCTAAGAGAGAGAGGGAAGGCTGTTGACCAGCCACCTCCTGAATAATTTCTCTGAAACATAAAACACTTTTTGATGCTTTGCCTGTCTCCCTTCGGATAGTATGTTAGTCTACCTGAATAAAGAGTGCATATTGTATTAACAACTCCAAACAATTGTTATTCGTTTCATGTGATTAAGGCTATGACCTTGGATAGGATGTGTTCTATAGATTGTACTGAGTTCTAAGTGAAGGTCATGTGATTGAGATTATTCTAAGTTCGGTTTTTCAGATGGAATTAATTTCTGAATTCTATCATGAAAATCAAATCACTGAAATGATGAAGAAGAATCACTTACTATATAGAAATGGCATTACGAATATCATTCCTTTTC ATGGCACATTCACTATCTTCAATATCCGCCACTGCTAATGCCACAGCCGCCAGATTCAGCAACCCACGATGTTCCTCCTGTCTCAGGCTTCCAAATCTGCAGGCTCGCAGCCAAGCGTGCAATCAAACTGCACGTAGCCATCTCATCTCCCGCAGGAACGCTGCATTGATCTTGACAGGGGCAATCCTAGGACTGAATAATGTGGTTGTCCAGAGTGCAGAGGCGGCTGCCAGGAGGCCGCCGCCACCTCCCCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGCAGAAAGAGGAAGGAAGCCATGAAAGAAGCTATGGCCAAGCTAAGAGAGAGAGGGAAGGCTGTTGACCAGCCACCTCCTGAATAA
BLAST of CmoCh04G019440 vs. TrEMBL
Match: A0A0A0KPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G588750 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-38 Identity = 101/135 (74.81%), Postives = 111/135 (82.22%), Query Frame = 1
BLAST of CmoCh04G019440 vs. TrEMBL
Match: V4TPT1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022842mg PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.8e-21 Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 1
BLAST of CmoCh04G019440 vs. TrEMBL
Match: A0A067DSG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032923mg PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.7e-20 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1
BLAST of CmoCh04G019440 vs. TrEMBL
Match: D7T2H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00880 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 6.4e-20 Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 1
BLAST of CmoCh04G019440 vs. TrEMBL
Match: A0A0B0NRC8_GOSAR (DNA translocase FtsK OS=Gossypium arboreum GN=F383_17943 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-19 Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1
BLAST of CmoCh04G019440 vs. TAIR10
Match: AT1G21500.1 (AT1G21500.1 unknown protein) HSP 1 Score: 81.6 bits (200), Expect = 3.8e-16 Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = 1
BLAST of CmoCh04G019440 vs. NCBI nr
Match: gi|449435109|ref|XP_004135338.1| (PREDICTED: uncharacterized protein LOC101217329 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38 Identity = 101/135 (74.81%), Postives = 111/135 (82.22%), Query Frame = 1
BLAST of CmoCh04G019440 vs. NCBI nr
Match: gi|659090434|ref|XP_008446014.1| (PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo]) HSP 1 Score: 165.2 bits (417), Expect = 7.4e-38 Identity = 102/135 (75.56%), Postives = 112/135 (82.96%), Query Frame = 1
BLAST of CmoCh04G019440 vs. NCBI nr
Match: gi|567899408|ref|XP_006442192.1| (hypothetical protein CICLE_v10022842mg [Citrus clementina]) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 1
BLAST of CmoCh04G019440 vs. NCBI nr
Match: gi|568879703|ref|XP_006492785.1| (PREDICTED: uncharacterized protein LOC102627820 [Citrus sinensis]) HSP 1 Score: 107.1 bits (266), Expect = 2.4e-20 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1
BLAST of CmoCh04G019440 vs. NCBI nr
Match: gi|225434148|ref|XP_002277983.1| (PREDICTED: uncharacterized protein LOC100252564 [Vitis vinifera]) HSP 1 Score: 105.1 bits (261), Expect = 9.1e-20 Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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