CmaCh04G018490 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGATTAAGCACTAGAAATGATTGTATAATTTCCTAAACTCCCGCATGGTAATGTGAGAGATTGAGAAACAATGGCACATTCACTATCTTCAATATCCGCCACTGCTAATGCCACAGCCGCCAGATTCAGCAACCCACGATGTTCCACCTGTCTCAGGCTTCCGAATCTGCAGGCTCGCAGCCACGCGTGCAATCAAACTGCACGTACCCATCTCATCTCCCGCAGGTACAACCATTTGTTTCCTATCACTGTGCATCCAATGCGACTATCTGTTAGTCGTACCAGTCATTACTTGAATATATCGCAACAGTTTTTAGATTCAAGGATGGTCTAACACGAAAAATTCTGTGTTCGAATTCCTCTTCAAATTGCAGGAACGCTGCATTGATCTTGACAGGGGCAATGCTTGGACTGAATAATGTGGTTGTCCAGAGTGCAGAGGCGGCTGCCAGGAGGCCGCCGCCACCTCCCCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGCAGAAAGAGGAAGGAAGCCATGAAAGAAGCTATGGCCAAGCTAAGAGAGAGAGGGAAGGCTGTTGACCAGCCACCTCCTGAATAATTTCTCTGAAACATAAACACTTTTTGATGCTTTGCCTGTCCCTTCGGATTACTAGTCTACCTGAATAAAGAGTGCATATTGTATTAACAACTCCAAACAATTGTTTAAGGCTATGACCTTGGATAGGATGTGTTCTATAGATTGTACTGAGTTCTAAGTGTAAGTCATTTGATTGAGATTATTCTAAATTCGGTTTTTCAGATGGAA GTTTGATTAAGCACTAGAAATGATTGTATAATTTCCTAAACTCCCGCATGGTAATGTGAGAGATTGAGAAACAATGGCACATTCACTATCTTCAATATCCGCCACTGCTAATGCCACAGCCGCCAGATTCAGCAACCCACGATGTTCCACCTGTCTCAGGCTTCCGAATCTGCAGGCTCGCAGCCACGCGTGCAATCAAACTGCACGTACCCATCTCATCTCCCGCAGGAACGCTGCATTGATCTTGACAGGGGCAATGCTTGGACTGAATAATGTGGTTGTCCAGAGTGCAGAGGCGGCTGCCAGGAGGCCGCCGCCACCTCCCCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGCAGAAAGAGGAAGGAAGCCATGAAAGAAGCTATGGCCAAGCTAAGAGAGAGAGGGAAGGCTGTTGACCAGCCACCTCCTGAATAATTTCTCTGAAACATAAACACTTTTTGATGCTTTGCCTGTCCCTTCGGATTACTAGTCTACCTGAATAAAGAGTGCATATTGTATTAACAACTCCAAACAATTGTTTAAGGCTATGACCTTGGATAGGATGTGTTCTATAGATTGTACTGAGTTCTAAGTGTAAGTCATTTGATTGAGATTATTCTAAATTCGGTTTTTCAGATGGAA ATGGCACATTCACTATCTTCAATATCCGCCACTGCTAATGCCACAGCCGCCAGATTCAGCAACCCACGATGTTCCACCTGTCTCAGGCTTCCGAATCTGCAGGCTCGCAGCCACGCGTGCAATCAAACTGCACGTACCCATCTCATCTCCCGCAGGAACGCTGCATTGATCTTGACAGGGGCAATGCTTGGACTGAATAATGTGGTTGTCCAGAGTGCAGAGGCGGCTGCCAGGAGGCCGCCGCCACCTCCCCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGCAGAAAGAGGAAGGAAGCCATGAAAGAAGCTATGGCCAAGCTAAGAGAGAGAGGGAAGGCTGTTGACCAGCCACCTCCTGAATAA MAHSLSSISATANATAARFSNPRCSTCLRLPNLQARSHACNQTARTHLISRRNAALILTGAMLGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKEAMAKLRERGKAVDQPPPE
BLAST of CmaCh04G018490 vs. TrEMBL
Match: A0A0A0KPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G588750 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 9.4e-40 Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 1
BLAST of CmaCh04G018490 vs. TrEMBL
Match: A0A067DSG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032923mg PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.9e-20 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1
BLAST of CmaCh04G018490 vs. TrEMBL
Match: V4TPT1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022842mg PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 6.4e-20 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 1
BLAST of CmaCh04G018490 vs. TrEMBL
Match: A0A0B0NRC8_GOSAR (DNA translocase FtsK OS=Gossypium arboreum GN=F383_17943 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.4e-19 Identity = 74/134 (55.22%), Postives = 87/134 (64.93%), Query Frame = 1
BLAST of CmaCh04G018490 vs. TrEMBL
Match: A0A0D2T7H3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G133600 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18 Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 1
BLAST of CmaCh04G018490 vs. TAIR10
Match: AT1G21500.1 (AT1G21500.1 unknown protein) HSP 1 Score: 81.6 bits (200), Expect = 3.8e-16 Identity = 60/130 (46.15%), Postives = 80/130 (61.54%), Query Frame = 1
BLAST of CmaCh04G018490 vs. NCBI nr
Match: gi|449435109|ref|XP_004135338.1| (PREDICTED: uncharacterized protein LOC101217329 [Cucumis sativus]) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39 Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 1
BLAST of CmaCh04G018490 vs. NCBI nr
Match: gi|659090434|ref|XP_008446014.1| (PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 3.3e-38 Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 1
BLAST of CmaCh04G018490 vs. NCBI nr
Match: gi|568879703|ref|XP_006492785.1| (PREDICTED: uncharacterized protein LOC102627820 [Citrus sinensis]) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1
BLAST of CmaCh04G018490 vs. NCBI nr
Match: gi|567899408|ref|XP_006442192.1| (hypothetical protein CICLE_v10022842mg [Citrus clementina]) HSP 1 Score: 105.1 bits (261), Expect = 9.1e-20 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 1
BLAST of CmaCh04G018490 vs. NCBI nr
Match: gi|728834886|gb|KHG14329.1| (DNA translocase FtsK [Gossypium arboreum]) HSP 1 Score: 103.2 bits (256), Expect = 3.5e-19 Identity = 74/134 (55.22%), Postives = 87/134 (64.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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