CSPI05G21260 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTTGTTAATTTTCAGAGTGAAATCCATGAGTATCATAATTGTAAAGATAAATTTCCACTCCACTTGAAATTGAAATTGGGGTCCAGAGCTATATTGCCTTATCCACAACCGACCAATAGATTTCAATAACCATTCTCTAGAGAACCCCTATGGGATATCCTCTTTGAGAGTCTGTTGTTTACACATAAGAAATGTATTGCACAAAAGAAGAGAAAAAAAAGGTCTCTTCTATTCTAATATCATAAACCTCTCATATGGTGATGTGAGATTGAGAAACAATGGCACATTCACTATCTTCTGTATCGGCTACAGCCAATGTCACAGCCACTCTCTCGCGCTCTATCCGATTCAGCAACACACAATGTTCTTATCAAAGGCTTCCAAATCCACAAGCTTGCAGTAACGCTTGCAATGAAACTCAACATACCAATCTCATCTCACGCAGGTACAAGTCTAATGCAAGTGAATATGTACAACATTATATTATCAACGATAGATTCTGAGTTGGTTTTAAATTTCTTAATATCTACAAATTCTTTTGCATAATTGCTATTAGATGCAATTGACCCTAATAATAAGTTACATGCATTATAAATTTTTTGTGTTCAAATTCCTCTAAGATCATTAGCCACACATCCAATGTGGTGTGGCTCAAAATTGCAGAAACACTGCCTTGATCCTGACAGGGGTAATGCTGGGTGTGAATGTGGTTGACCGGAGGGCGGAGGCAGCGGCAAGAAGACCGCCACCACCTCCACCGCAAGAGAAGAAGGACCCCAATCTGAGTGGGGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGAAAGGAAGCCCTTAAAGAAGCTACAGCTAAGCTAAGAGCGAAAGGGAAACCTGTTGACCAGCCACCACCTGAATAATTTATGTGAATCCCAAACTTTTTGATGTTTTCGCATTTCTCCCGTCGGATATTATGTTAATCCCCACCTGAATAAAGAGTGCATATTTATATTAACAACTCTAATATTCGTTTGTGAAGTAAGAAATATGATTAAGGCCATGTGGCCATTCTATTGATTGTACTCTATTCTATGAGTTAGCTATGAGTACCAAGAGCC ATGGCACATTCACTATCTTCTGTATCGGCTACAGCCAATGTCACAGCCACTCTCTCGCGCTCTATCCGATTCAGCAACACACAATGTTCTTATCAAAGGCTTCCAAATCCACAAGCTTGCAGTAACGCTTGCAATGAAACTCAACATACCAATCTCATCTCACGCAGAAACACTGCCTTGATCCTGACAGGGGTAATGCTGGGTGTGAATGTGGTTGACCGGAGGGCGGAGGCAGCGGCAAGAAGACCGCCACCACCTCCACCGCAAGAGAAGAAGGACCCCAATCTGAGTGGGGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGAAAGGAAGCCCTTAAAGAAGCTACAGCTAAGCTAAGAGCGAAAGGGAAACCTGTTGACCAGCCACCACCTGAATAA ATGGCACATTCACTATCTTCTGTATCGGCTACAGCCAATGTCACAGCCACTCTCTCGCGCTCTATCCGATTCAGCAACACACAATGTTCTTATCAAAGGCTTCCAAATCCACAAGCTTGCAGTAACGCTTGCAATGAAACTCAACATACCAATCTCATCTCACGCAGAAACACTGCCTTGATCCTGACAGGGGTAATGCTGGGTGTGAATGTGGTTGACCGGAGGGCGGAGGCAGCGGCAAGAAGACCGCCACCACCTCCACCGCAAGAGAAGAAGGACCCCAATCTGAGTGGGGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGAAAGGAAGCCCTTAAAGAAGCTACAGCTAAGCTAAGAGCGAAAGGGAAACCTGTTGACCAGCCACCACCTGAATAA
BLAST of CSPI05G21260 vs. TrEMBL
Match: A0A0A0KPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G588750 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 2.8e-63 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of CSPI05G21260 vs. TrEMBL
Match: V4TPT1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022842mg PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 7.0e-22 Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 1
BLAST of CSPI05G21260 vs. TrEMBL
Match: A0A067DSG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032923mg PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.5e-21 Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of CSPI05G21260 vs. TrEMBL
Match: W9RQQ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020379 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 7.7e-21 Identity = 70/136 (51.47%), Postives = 88/136 (64.71%), Query Frame = 1
BLAST of CSPI05G21260 vs. TrEMBL
Match: A0A0B0NRC8_GOSAR (DNA translocase FtsK OS=Gossypium arboreum GN=F383_17943 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.8e-20 Identity = 70/135 (51.85%), Postives = 83/135 (61.48%), Query Frame = 1
BLAST of CSPI05G21260 vs. TAIR10
Match: AT1G21500.1 (AT1G21500.1 unknown protein) HSP 1 Score: 78.6 bits (192), Expect = 3.3e-15 Identity = 58/134 (43.28%), Postives = 75/134 (55.97%), Query Frame = 1
BLAST of CSPI05G21260 vs. NCBI nr
Match: gi|449435109|ref|XP_004135338.1| (PREDICTED: uncharacterized protein LOC101217329 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 4.0e-63 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of CSPI05G21260 vs. NCBI nr
Match: gi|659090434|ref|XP_008446014.1| (PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 1.4e-55 Identity = 121/133 (90.98%), Postives = 128/133 (96.24%), Query Frame = 1
BLAST of CSPI05G21260 vs. NCBI nr
Match: gi|567899408|ref|XP_006442192.1| (hypothetical protein CICLE_v10022842mg [Citrus clementina]) HSP 1 Score: 111.7 bits (278), Expect = 1.0e-21 Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 1
BLAST of CSPI05G21260 vs. NCBI nr
Match: gi|568879703|ref|XP_006492785.1| (PREDICTED: uncharacterized protein LOC102627820 [Citrus sinensis]) HSP 1 Score: 109.0 bits (271), Expect = 6.5e-21 Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of CSPI05G21260 vs. NCBI nr
Match: gi|703117377|ref|XP_010101364.1| (hypothetical protein L484_020379 [Morus notabilis]) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 70/136 (51.47%), Postives = 88/136 (64.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |